Multiple sequence alignment - TraesCS1B01G470100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G470100 chr1B 100.000 3708 0 0 1 3708 678554297 678550590 0.000000e+00 6848
1 TraesCS1B01G470100 chr1B 91.647 2502 169 17 742 3208 678606803 678604307 0.000000e+00 3426
2 TraesCS1B01G470100 chr1B 92.121 2310 151 15 1420 3705 641197413 641199715 0.000000e+00 3229
3 TraesCS1B01G470100 chr1B 93.333 1710 106 8 1420 3123 678486053 678484346 0.000000e+00 2519
4 TraesCS1B01G470100 chr1B 91.856 1756 122 12 1457 3205 678311781 678313522 0.000000e+00 2431
5 TraesCS1B01G470100 chr1B 91.920 1547 110 11 1668 3208 678790439 678788902 0.000000e+00 2150
6 TraesCS1B01G470100 chr1B 91.483 1362 104 8 1847 3205 678406896 678408248 0.000000e+00 1862
7 TraesCS1B01G470100 chr1B 91.200 1250 106 4 1962 3208 678444490 678443242 0.000000e+00 1696
8 TraesCS1B01G470100 chr1B 94.943 870 42 2 1420 2287 641112096 641112965 0.000000e+00 1362
9 TraesCS1B01G470100 chr1B 94.350 708 32 2 719 1423 678486789 678486087 0.000000e+00 1079
10 TraesCS1B01G470100 chr1B 95.775 639 13 4 3084 3708 678746316 678745678 0.000000e+00 1018
11 TraesCS1B01G470100 chr1B 94.569 626 28 3 742 1366 678791093 678790473 0.000000e+00 963
12 TraesCS1B01G470100 chr1B 92.222 630 28 6 714 1338 678753336 678752723 0.000000e+00 872
13 TraesCS1B01G470100 chr1B 93.318 434 27 2 992 1423 678445538 678445105 1.120000e-179 640
14 TraesCS1B01G470100 chr1B 83.102 722 85 24 726 1423 641196672 641197380 1.130000e-174 623
15 TraesCS1B01G470100 chr1B 90.741 432 40 0 992 1423 678739824 678739393 8.930000e-161 577
16 TraesCS1B01G470100 chr1B 95.477 199 5 2 785 979 641111608 641111806 7.730000e-82 315
17 TraesCS1B01G470100 chr1B 93.243 74 2 1 710 780 641111408 641111481 5.060000e-19 106
18 TraesCS1B01G470100 chr1A 91.144 2518 178 27 720 3205 584846482 584848986 0.000000e+00 3373
19 TraesCS1B01G470100 chr1D 93.315 1795 98 13 1420 3205 487275571 487277352 0.000000e+00 2630
20 TraesCS1B01G470100 chr1D 91.436 724 45 5 710 1420 487274816 487275535 0.000000e+00 977
21 TraesCS1B01G470100 chr1D 86.050 724 69 18 1 705 416269613 416268903 0.000000e+00 749
22 TraesCS1B01G470100 chr7B 94.310 703 39 1 1 703 139529251 139528550 0.000000e+00 1075
23 TraesCS1B01G470100 chr7B 82.402 716 64 22 32 703 686970204 686969507 5.370000e-158 568
24 TraesCS1B01G470100 chr5D 84.780 703 63 14 26 703 539692255 539692938 0.000000e+00 665
25 TraesCS1B01G470100 chr5D 80.282 568 73 20 2 551 365087212 365087758 3.470000e-105 392
26 TraesCS1B01G470100 chr5B 80.716 726 86 20 1 703 106961347 106962041 1.970000e-142 516
27 TraesCS1B01G470100 chr2D 78.285 723 94 36 2 685 643638074 643637376 1.240000e-109 407
28 TraesCS1B01G470100 chr3A 79.852 541 68 20 33 551 693454324 693453803 1.270000e-94 357
29 TraesCS1B01G470100 chr2A 87.960 299 23 6 217 506 80596431 80596137 1.280000e-89 340
30 TraesCS1B01G470100 chr2A 86.224 196 18 6 1 189 80598377 80598184 1.750000e-48 204


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G470100 chr1B 678550590 678554297 3707 True 6848.000000 6848 100.000000 1 3708 1 chr1B.!!$R1 3707
1 TraesCS1B01G470100 chr1B 678604307 678606803 2496 True 3426.000000 3426 91.647000 742 3208 1 chr1B.!!$R2 2466
2 TraesCS1B01G470100 chr1B 678311781 678313522 1741 False 2431.000000 2431 91.856000 1457 3205 1 chr1B.!!$F1 1748
3 TraesCS1B01G470100 chr1B 641196672 641199715 3043 False 1926.000000 3229 87.611500 726 3705 2 chr1B.!!$F4 2979
4 TraesCS1B01G470100 chr1B 678406896 678408248 1352 False 1862.000000 1862 91.483000 1847 3205 1 chr1B.!!$F2 1358
5 TraesCS1B01G470100 chr1B 678484346 678486789 2443 True 1799.000000 2519 93.841500 719 3123 2 chr1B.!!$R7 2404
6 TraesCS1B01G470100 chr1B 678788902 678791093 2191 True 1556.500000 2150 93.244500 742 3208 2 chr1B.!!$R8 2466
7 TraesCS1B01G470100 chr1B 678443242 678445538 2296 True 1168.000000 1696 92.259000 992 3208 2 chr1B.!!$R6 2216
8 TraesCS1B01G470100 chr1B 678745678 678746316 638 True 1018.000000 1018 95.775000 3084 3708 1 chr1B.!!$R4 624
9 TraesCS1B01G470100 chr1B 678752723 678753336 613 True 872.000000 872 92.222000 714 1338 1 chr1B.!!$R5 624
10 TraesCS1B01G470100 chr1B 641111408 641112965 1557 False 594.333333 1362 94.554333 710 2287 3 chr1B.!!$F3 1577
11 TraesCS1B01G470100 chr1A 584846482 584848986 2504 False 3373.000000 3373 91.144000 720 3205 1 chr1A.!!$F1 2485
12 TraesCS1B01G470100 chr1D 487274816 487277352 2536 False 1803.500000 2630 92.375500 710 3205 2 chr1D.!!$F1 2495
13 TraesCS1B01G470100 chr1D 416268903 416269613 710 True 749.000000 749 86.050000 1 705 1 chr1D.!!$R1 704
14 TraesCS1B01G470100 chr7B 139528550 139529251 701 True 1075.000000 1075 94.310000 1 703 1 chr7B.!!$R1 702
15 TraesCS1B01G470100 chr7B 686969507 686970204 697 True 568.000000 568 82.402000 32 703 1 chr7B.!!$R2 671
16 TraesCS1B01G470100 chr5D 539692255 539692938 683 False 665.000000 665 84.780000 26 703 1 chr5D.!!$F2 677
17 TraesCS1B01G470100 chr5D 365087212 365087758 546 False 392.000000 392 80.282000 2 551 1 chr5D.!!$F1 549
18 TraesCS1B01G470100 chr5B 106961347 106962041 694 False 516.000000 516 80.716000 1 703 1 chr5B.!!$F1 702
19 TraesCS1B01G470100 chr2D 643637376 643638074 698 True 407.000000 407 78.285000 2 685 1 chr2D.!!$R1 683
20 TraesCS1B01G470100 chr3A 693453803 693454324 521 True 357.000000 357 79.852000 33 551 1 chr3A.!!$R1 518
21 TraesCS1B01G470100 chr2A 80596137 80598377 2240 True 272.000000 340 87.092000 1 506 2 chr2A.!!$R1 505

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
632 2472 0.032678 CCTGATCGAGGAATGGACGG 59.967 60.0 5.53 0.0 46.33 4.79 F
638 2478 0.032678 CGAGGAATGGACGGGAGATG 59.967 60.0 0.00 0.0 0.00 2.90 F
680 2520 0.034198 TGACGGCGGAACAGAATGAA 59.966 50.0 13.24 0.0 39.69 2.57 F
708 2548 0.179084 CGAGTGGGTCGCATTATGGT 60.179 55.0 0.00 0.0 43.03 3.55 F
1210 3227 0.250338 GACGGGTCTTTGGCTGAAGT 60.250 55.0 0.00 0.0 0.00 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1809 3998 3.118665 ACCAATGCCACCTTTAATGATGC 60.119 43.478 0.0 0.0 0.00 3.91 R
1902 4094 3.587797 ATGCATTCAGCCAACAGAAAG 57.412 42.857 0.0 0.0 44.83 2.62 R
2152 4346 4.202161 CGTATATCAGTCACCTTTGGCTCT 60.202 45.833 0.0 0.0 34.53 4.09 R
2352 4547 4.273148 ACCCACACTTGAGAGTATTCAC 57.727 45.455 0.0 0.0 33.90 3.18 R
3056 5305 0.966179 TCACCAAGCTCGCAAGTAGA 59.034 50.000 0.0 0.0 39.48 2.59 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
62 78 1.080025 GCGTTAGTTGGCTCCGTCT 60.080 57.895 0.00 0.00 0.00 4.18
124 149 4.284550 TGACCTTGTGGCAGGCCC 62.285 66.667 8.02 0.00 37.47 5.80
265 2045 2.365941 GCTCCTAGGAAATAACCGAGCT 59.634 50.000 13.77 0.00 37.68 4.09
288 2068 1.267806 CACTGTGATTGCCAACAGACC 59.732 52.381 0.32 0.00 34.59 3.85
477 2299 0.533308 AGCGTCCGGTGTTTTTGCTA 60.533 50.000 0.00 0.00 0.00 3.49
507 2329 0.904649 TGAATCAGGCCACGATGAGT 59.095 50.000 5.01 0.00 0.00 3.41
508 2330 1.278985 TGAATCAGGCCACGATGAGTT 59.721 47.619 5.01 0.00 0.00 3.01
537 2361 2.279517 CGCCTCACATACGGCCTC 60.280 66.667 0.00 0.00 43.38 4.70
567 2404 1.222936 GAGGACGGGTAGGAGACGA 59.777 63.158 0.00 0.00 0.00 4.20
577 2417 2.359531 GGTAGGAGACGATGAGAACCTG 59.640 54.545 0.00 0.00 0.00 4.00
578 2418 0.820871 AGGAGACGATGAGAACCTGC 59.179 55.000 0.00 0.00 0.00 4.85
579 2419 0.526524 GGAGACGATGAGAACCTGCG 60.527 60.000 0.00 0.00 0.00 5.18
580 2420 1.142778 GAGACGATGAGAACCTGCGC 61.143 60.000 0.00 0.00 0.00 6.09
581 2421 2.125512 ACGATGAGAACCTGCGCC 60.126 61.111 4.18 0.00 0.00 6.53
582 2422 3.257561 CGATGAGAACCTGCGCCG 61.258 66.667 4.18 0.00 0.00 6.46
583 2423 2.184322 GATGAGAACCTGCGCCGA 59.816 61.111 4.18 0.00 0.00 5.54
584 2424 1.880340 GATGAGAACCTGCGCCGAG 60.880 63.158 4.18 0.00 0.00 4.63
599 2439 4.803426 GAGCCACCGAGCGTCTGG 62.803 72.222 0.00 0.00 38.01 3.86
602 2442 4.436998 CCACCGAGCGTCTGGTCC 62.437 72.222 0.00 0.00 39.47 4.46
603 2443 3.680786 CACCGAGCGTCTGGTCCA 61.681 66.667 0.00 0.00 39.47 4.02
604 2444 3.681835 ACCGAGCGTCTGGTCCAC 61.682 66.667 0.00 0.00 39.47 4.02
605 2445 3.374402 CCGAGCGTCTGGTCCACT 61.374 66.667 0.00 0.00 39.47 4.00
606 2446 2.044555 CCGAGCGTCTGGTCCACTA 61.045 63.158 0.00 0.00 39.47 2.74
607 2447 1.429825 CGAGCGTCTGGTCCACTAG 59.570 63.158 0.00 0.00 39.47 2.57
608 2448 1.139947 GAGCGTCTGGTCCACTAGC 59.860 63.158 0.00 0.00 36.61 3.42
609 2449 1.595993 GAGCGTCTGGTCCACTAGCA 61.596 60.000 9.53 0.00 36.61 3.49
610 2450 1.446272 GCGTCTGGTCCACTAGCAC 60.446 63.158 0.00 0.00 0.00 4.40
611 2451 1.154016 CGTCTGGTCCACTAGCACG 60.154 63.158 0.00 0.00 0.00 5.34
612 2452 1.215647 GTCTGGTCCACTAGCACGG 59.784 63.158 0.00 0.00 0.00 4.94
613 2453 2.125512 CTGGTCCACTAGCACGGC 60.126 66.667 0.00 0.00 0.00 5.68
614 2454 3.665675 CTGGTCCACTAGCACGGCC 62.666 68.421 0.00 0.00 0.00 6.13
615 2455 3.391382 GGTCCACTAGCACGGCCT 61.391 66.667 0.00 0.00 0.00 5.19
616 2456 2.125512 GTCCACTAGCACGGCCTG 60.126 66.667 0.00 0.00 0.00 4.85
617 2457 2.283604 TCCACTAGCACGGCCTGA 60.284 61.111 0.00 0.00 0.00 3.86
618 2458 1.685765 TCCACTAGCACGGCCTGAT 60.686 57.895 0.00 0.00 0.00 2.90
619 2459 1.227380 CCACTAGCACGGCCTGATC 60.227 63.158 0.00 0.00 0.00 2.92
620 2460 1.589993 CACTAGCACGGCCTGATCG 60.590 63.158 0.00 0.00 0.00 3.69
621 2461 1.753078 ACTAGCACGGCCTGATCGA 60.753 57.895 0.00 0.00 0.00 3.59
622 2462 1.007964 CTAGCACGGCCTGATCGAG 60.008 63.158 0.00 0.00 0.00 4.04
623 2463 2.413437 CTAGCACGGCCTGATCGAGG 62.413 65.000 0.00 6.79 46.13 4.63
624 2464 2.904178 TAGCACGGCCTGATCGAGGA 62.904 60.000 13.48 0.00 46.33 3.71
625 2465 2.892640 CACGGCCTGATCGAGGAA 59.107 61.111 13.48 0.00 46.33 3.36
626 2466 1.443407 CACGGCCTGATCGAGGAAT 59.557 57.895 13.48 0.00 46.33 3.01
627 2467 0.877649 CACGGCCTGATCGAGGAATG 60.878 60.000 13.48 5.75 46.33 2.67
628 2468 1.301244 CGGCCTGATCGAGGAATGG 60.301 63.158 13.48 0.00 46.33 3.16
629 2469 1.748329 CGGCCTGATCGAGGAATGGA 61.748 60.000 13.48 0.00 46.33 3.41
630 2470 0.250081 GGCCTGATCGAGGAATGGAC 60.250 60.000 13.48 0.00 46.33 4.02
631 2471 0.598680 GCCTGATCGAGGAATGGACG 60.599 60.000 13.48 0.00 46.33 4.79
632 2472 0.032678 CCTGATCGAGGAATGGACGG 59.967 60.000 5.53 0.00 46.33 4.79
633 2473 0.032678 CTGATCGAGGAATGGACGGG 59.967 60.000 0.00 0.00 0.00 5.28
634 2474 0.396556 TGATCGAGGAATGGACGGGA 60.397 55.000 0.00 0.00 0.00 5.14
635 2475 0.315568 GATCGAGGAATGGACGGGAG 59.684 60.000 0.00 0.00 0.00 4.30
636 2476 0.106167 ATCGAGGAATGGACGGGAGA 60.106 55.000 0.00 0.00 0.00 3.71
637 2477 0.106167 TCGAGGAATGGACGGGAGAT 60.106 55.000 0.00 0.00 0.00 2.75
638 2478 0.032678 CGAGGAATGGACGGGAGATG 59.967 60.000 0.00 0.00 0.00 2.90
639 2479 0.394565 GAGGAATGGACGGGAGATGG 59.605 60.000 0.00 0.00 0.00 3.51
640 2480 1.056700 AGGAATGGACGGGAGATGGG 61.057 60.000 0.00 0.00 0.00 4.00
641 2481 1.451936 GAATGGACGGGAGATGGGG 59.548 63.158 0.00 0.00 0.00 4.96
642 2482 1.307866 AATGGACGGGAGATGGGGT 60.308 57.895 0.00 0.00 0.00 4.95
643 2483 0.919289 AATGGACGGGAGATGGGGTT 60.919 55.000 0.00 0.00 0.00 4.11
644 2484 1.635817 ATGGACGGGAGATGGGGTTG 61.636 60.000 0.00 0.00 0.00 3.77
645 2485 2.124695 GACGGGAGATGGGGTTGC 60.125 66.667 0.00 0.00 0.00 4.17
646 2486 2.610859 ACGGGAGATGGGGTTGCT 60.611 61.111 0.00 0.00 0.00 3.91
647 2487 2.124570 CGGGAGATGGGGTTGCTG 60.125 66.667 0.00 0.00 0.00 4.41
648 2488 2.669133 CGGGAGATGGGGTTGCTGA 61.669 63.158 0.00 0.00 0.00 4.26
649 2489 1.225704 GGGAGATGGGGTTGCTGAG 59.774 63.158 0.00 0.00 0.00 3.35
650 2490 1.274703 GGGAGATGGGGTTGCTGAGA 61.275 60.000 0.00 0.00 0.00 3.27
651 2491 0.842635 GGAGATGGGGTTGCTGAGAT 59.157 55.000 0.00 0.00 0.00 2.75
652 2492 1.476471 GGAGATGGGGTTGCTGAGATG 60.476 57.143 0.00 0.00 0.00 2.90
653 2493 0.106819 AGATGGGGTTGCTGAGATGC 60.107 55.000 0.00 0.00 0.00 3.91
654 2494 0.394762 GATGGGGTTGCTGAGATGCA 60.395 55.000 0.00 0.00 41.65 3.96
655 2495 0.260816 ATGGGGTTGCTGAGATGCAT 59.739 50.000 0.00 0.00 42.96 3.96
656 2496 0.681887 TGGGGTTGCTGAGATGCATG 60.682 55.000 2.46 0.00 42.96 4.06
657 2497 1.436336 GGGTTGCTGAGATGCATGC 59.564 57.895 11.82 11.82 42.96 4.06
658 2498 1.063649 GGTTGCTGAGATGCATGCG 59.936 57.895 14.09 0.00 42.96 4.73
659 2499 1.585521 GTTGCTGAGATGCATGCGC 60.586 57.895 14.09 9.64 42.96 6.09
660 2500 3.103354 TTGCTGAGATGCATGCGCG 62.103 57.895 14.09 0.00 42.96 6.86
661 2501 3.570638 GCTGAGATGCATGCGCGT 61.571 61.111 14.09 0.00 42.97 6.01
662 2502 2.323447 CTGAGATGCATGCGCGTG 59.677 61.111 25.25 25.25 42.97 5.34
663 2503 2.125592 TGAGATGCATGCGCGTGA 60.126 55.556 32.94 17.76 42.97 4.35
664 2504 2.322422 GAGATGCATGCGCGTGAC 59.678 61.111 32.94 22.62 42.97 3.67
666 2506 4.580044 GATGCATGCGCGTGACGG 62.580 66.667 32.94 7.08 43.93 4.79
676 2516 2.355363 CGTGACGGCGGAACAGAA 60.355 61.111 13.24 0.00 0.00 3.02
677 2517 1.736645 CGTGACGGCGGAACAGAAT 60.737 57.895 13.24 0.00 0.00 2.40
678 2518 1.787847 GTGACGGCGGAACAGAATG 59.212 57.895 13.24 0.00 46.00 2.67
679 2519 0.669318 GTGACGGCGGAACAGAATGA 60.669 55.000 13.24 0.00 39.69 2.57
680 2520 0.034198 TGACGGCGGAACAGAATGAA 59.966 50.000 13.24 0.00 39.69 2.57
681 2521 1.153353 GACGGCGGAACAGAATGAAA 58.847 50.000 13.24 0.00 39.69 2.69
682 2522 1.737793 GACGGCGGAACAGAATGAAAT 59.262 47.619 13.24 0.00 39.69 2.17
683 2523 1.468520 ACGGCGGAACAGAATGAAATG 59.531 47.619 13.24 0.00 39.69 2.32
684 2524 1.202177 CGGCGGAACAGAATGAAATGG 60.202 52.381 0.00 0.00 39.69 3.16
685 2525 2.091541 GGCGGAACAGAATGAAATGGA 58.908 47.619 0.00 0.00 39.69 3.41
686 2526 2.098117 GGCGGAACAGAATGAAATGGAG 59.902 50.000 0.00 0.00 39.69 3.86
687 2527 3.009723 GCGGAACAGAATGAAATGGAGA 58.990 45.455 0.00 0.00 39.69 3.71
688 2528 3.440173 GCGGAACAGAATGAAATGGAGAA 59.560 43.478 0.00 0.00 39.69 2.87
689 2529 4.672801 GCGGAACAGAATGAAATGGAGAAC 60.673 45.833 0.00 0.00 39.69 3.01
690 2530 4.436050 CGGAACAGAATGAAATGGAGAACG 60.436 45.833 0.00 0.00 39.69 3.95
691 2531 4.695455 GGAACAGAATGAAATGGAGAACGA 59.305 41.667 0.00 0.00 39.69 3.85
692 2532 5.163814 GGAACAGAATGAAATGGAGAACGAG 60.164 44.000 0.00 0.00 39.69 4.18
693 2533 4.899502 ACAGAATGAAATGGAGAACGAGT 58.100 39.130 0.00 0.00 39.69 4.18
694 2534 4.692625 ACAGAATGAAATGGAGAACGAGTG 59.307 41.667 0.00 0.00 39.69 3.51
695 2535 4.093998 CAGAATGAAATGGAGAACGAGTGG 59.906 45.833 0.00 0.00 39.69 4.00
696 2536 2.472695 TGAAATGGAGAACGAGTGGG 57.527 50.000 0.00 0.00 0.00 4.61
697 2537 1.697432 TGAAATGGAGAACGAGTGGGT 59.303 47.619 0.00 0.00 0.00 4.51
698 2538 2.289444 TGAAATGGAGAACGAGTGGGTC 60.289 50.000 0.00 0.00 0.00 4.46
707 2547 2.605094 CGAGTGGGTCGCATTATGG 58.395 57.895 0.00 0.00 43.03 2.74
708 2548 0.179084 CGAGTGGGTCGCATTATGGT 60.179 55.000 0.00 0.00 43.03 3.55
709 2549 1.067974 CGAGTGGGTCGCATTATGGTA 59.932 52.381 0.00 0.00 43.03 3.25
710 2550 2.480845 GAGTGGGTCGCATTATGGTAC 58.519 52.381 0.00 0.00 0.00 3.34
711 2551 1.140252 AGTGGGTCGCATTATGGTACC 59.860 52.381 4.43 4.43 0.00 3.34
946 2963 2.417516 CCATCGTCTGCCCTACCG 59.582 66.667 0.00 0.00 0.00 4.02
1210 3227 0.250338 GACGGGTCTTTGGCTGAAGT 60.250 55.000 0.00 0.00 0.00 3.01
1382 3406 8.862550 CTCTTTTTGAGAAACAAGTGCTTTAT 57.137 30.769 0.00 0.00 45.39 1.40
1397 3421 2.424601 GCTTTATGTCTGCTGCATCCAA 59.575 45.455 1.31 0.00 0.00 3.53
1493 3555 4.759782 TCTGCTAGTAGATTGTTTGGCTC 58.240 43.478 6.42 0.00 0.00 4.70
1495 3557 2.285488 GCTAGTAGATTGTTTGGCTCGC 59.715 50.000 0.00 0.00 0.00 5.03
1559 3629 5.728351 TCGACAAATGACGGATTTTATCC 57.272 39.130 5.53 0.00 46.22 2.59
1582 3682 6.374053 TCCACTCAAAATGAAATATCAAGCGA 59.626 34.615 0.00 0.00 39.49 4.93
1586 3686 7.752239 ACTCAAAATGAAATATCAAGCGAACAG 59.248 33.333 0.00 0.00 39.49 3.16
1741 3922 6.484288 TGGATGAACTAGACATGGTTTTGAT 58.516 36.000 10.69 0.00 29.00 2.57
1780 3961 1.857217 CGAGCATCTGAAACATCTCCG 59.143 52.381 0.00 0.00 0.00 4.63
1809 3998 4.732285 TTTTTAGCTCAAGTTCTCAGCG 57.268 40.909 0.00 0.00 38.26 5.18
2187 4381 6.706270 GTGACTGATATACGGGAAACATCATT 59.294 38.462 0.00 0.00 0.00 2.57
2190 4384 9.436957 GACTGATATACGGGAAACATCATTAAT 57.563 33.333 0.00 0.00 0.00 1.40
2199 4393 6.310149 GGGAAACATCATTAATCCTGGAGAT 58.690 40.000 1.52 0.00 36.48 2.75
2352 4547 7.461182 TGGTTTACAATAGTTCCCAATTCAG 57.539 36.000 0.00 0.00 0.00 3.02
2382 4577 2.940410 CTCAAGTGTGGGTTTACGTGTT 59.060 45.455 0.00 0.00 0.00 3.32
2835 5074 1.872952 CTTGGACACACGCTGAAATCA 59.127 47.619 0.00 0.00 0.00 2.57
3007 5246 6.166984 TGTGCAATATTTCCAAAAGGTCAA 57.833 33.333 0.00 0.00 0.00 3.18
3048 5297 8.277197 TGATCTTATTCATCAATGGGTTTCTCT 58.723 33.333 0.00 0.00 0.00 3.10
3049 5298 9.129532 GATCTTATTCATCAATGGGTTTCTCTT 57.870 33.333 0.00 0.00 0.00 2.85
3050 5299 8.284945 TCTTATTCATCAATGGGTTTCTCTTG 57.715 34.615 0.00 0.00 0.00 3.02
3051 5300 5.927281 ATTCATCAATGGGTTTCTCTTGG 57.073 39.130 0.00 0.00 0.00 3.61
3052 5301 4.387026 TCATCAATGGGTTTCTCTTGGT 57.613 40.909 0.00 0.00 0.00 3.67
3053 5302 4.739793 TCATCAATGGGTTTCTCTTGGTT 58.260 39.130 0.00 0.00 0.00 3.67
3054 5303 5.147032 TCATCAATGGGTTTCTCTTGGTTT 58.853 37.500 0.00 0.00 0.00 3.27
3055 5304 5.243730 TCATCAATGGGTTTCTCTTGGTTTC 59.756 40.000 0.00 0.00 0.00 2.78
3056 5305 4.803452 TCAATGGGTTTCTCTTGGTTTCT 58.197 39.130 0.00 0.00 0.00 2.52
3057 5306 4.827284 TCAATGGGTTTCTCTTGGTTTCTC 59.173 41.667 0.00 0.00 0.00 2.87
3064 5313 5.049336 GGTTTCTCTTGGTTTCTCTACTTGC 60.049 44.000 0.00 0.00 0.00 4.01
3133 5382 5.336929 CCTTGAACATTCAAAGCCATCATCA 60.337 40.000 8.33 0.00 45.61 3.07
3246 5506 5.862845 AGGATTTGGACTAGCATATCACAG 58.137 41.667 0.00 0.00 0.00 3.66
3318 5581 8.022550 TCAGTTATTGATACACACAAATGCAAG 58.977 33.333 0.00 0.00 0.00 4.01
3416 5686 6.402222 AGTAAAACAAAAGGTCAATGCACAA 58.598 32.000 0.00 0.00 0.00 3.33
3418 5688 5.738118 AAACAAAAGGTCAATGCACAATG 57.262 34.783 0.00 0.00 0.00 2.82
3419 5689 3.132925 ACAAAAGGTCAATGCACAATGC 58.867 40.909 0.00 0.00 45.29 3.56
3594 5875 9.675464 TTAGAATCCGGCTTTTAGAAAATTAGA 57.325 29.630 0.00 0.00 0.00 2.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 4.348495 AAGAGGGGCCGAGGGGAA 62.348 66.667 0.00 0.00 34.06 3.97
62 78 3.627395 ACAAGAGGAACATGGCGATTA 57.373 42.857 0.00 0.00 0.00 1.75
124 149 1.672356 CAAGGCAGAGGGTGTTCGG 60.672 63.158 0.00 0.00 0.00 4.30
131 156 3.303351 AATCCATAACAAGGCAGAGGG 57.697 47.619 0.00 0.00 0.00 4.30
265 2045 4.002982 GTCTGTTGGCAATCACAGTGATA 58.997 43.478 16.71 0.00 35.76 2.15
288 2068 9.511144 AAATTCAGGTTTTAAGTTGTAAAGTCG 57.489 29.630 0.00 0.00 0.00 4.18
477 2299 0.680921 CCTGATTCATGGCGGTGGTT 60.681 55.000 0.00 0.00 0.00 3.67
507 2329 3.976701 GAGGCGCTGGCTTAGGCAA 62.977 63.158 10.27 0.00 38.98 4.52
508 2330 4.473520 GAGGCGCTGGCTTAGGCA 62.474 66.667 7.64 8.50 38.98 4.75
537 2361 2.802106 GTCCTCCTCTTCCTCGCG 59.198 66.667 0.00 0.00 0.00 5.87
567 2404 2.185350 CTCGGCGCAGGTTCTCAT 59.815 61.111 10.83 0.00 0.00 2.90
582 2422 4.803426 CCAGACGCTCGGTGGCTC 62.803 72.222 0.95 0.00 0.00 4.70
585 2425 4.436998 GGACCAGACGCTCGGTGG 62.437 72.222 10.25 10.25 34.99 4.61
586 2426 3.680786 TGGACCAGACGCTCGGTG 61.681 66.667 0.00 0.00 34.99 4.94
587 2427 2.759641 TAGTGGACCAGACGCTCGGT 62.760 60.000 0.00 0.00 38.56 4.69
588 2428 1.994507 CTAGTGGACCAGACGCTCGG 61.995 65.000 0.00 0.00 0.00 4.63
589 2429 1.429825 CTAGTGGACCAGACGCTCG 59.570 63.158 0.00 0.00 0.00 5.03
590 2430 1.139947 GCTAGTGGACCAGACGCTC 59.860 63.158 0.00 0.00 0.00 5.03
591 2431 1.606601 TGCTAGTGGACCAGACGCT 60.607 57.895 0.00 0.00 0.00 5.07
592 2432 1.446272 GTGCTAGTGGACCAGACGC 60.446 63.158 0.00 0.00 0.00 5.19
593 2433 1.154016 CGTGCTAGTGGACCAGACG 60.154 63.158 0.00 0.00 0.00 4.18
594 2434 1.215647 CCGTGCTAGTGGACCAGAC 59.784 63.158 0.00 0.00 0.00 3.51
595 2435 2.646175 GCCGTGCTAGTGGACCAGA 61.646 63.158 0.00 0.00 0.00 3.86
596 2436 2.125512 GCCGTGCTAGTGGACCAG 60.126 66.667 0.00 0.00 0.00 4.00
597 2437 3.702048 GGCCGTGCTAGTGGACCA 61.702 66.667 0.00 0.00 0.00 4.02
598 2438 3.391382 AGGCCGTGCTAGTGGACC 61.391 66.667 0.00 0.00 31.71 4.46
599 2439 1.961180 ATCAGGCCGTGCTAGTGGAC 61.961 60.000 0.00 0.00 0.00 4.02
600 2440 1.676678 GATCAGGCCGTGCTAGTGGA 61.677 60.000 0.00 0.00 0.00 4.02
601 2441 1.227380 GATCAGGCCGTGCTAGTGG 60.227 63.158 0.00 0.00 0.00 4.00
602 2442 1.589993 CGATCAGGCCGTGCTAGTG 60.590 63.158 0.00 0.00 0.00 2.74
603 2443 1.729470 CTCGATCAGGCCGTGCTAGT 61.729 60.000 0.00 0.00 0.00 2.57
604 2444 1.007964 CTCGATCAGGCCGTGCTAG 60.008 63.158 0.00 0.00 0.00 3.42
605 2445 2.490148 CCTCGATCAGGCCGTGCTA 61.490 63.158 0.00 0.00 34.56 3.49
606 2446 3.842923 CCTCGATCAGGCCGTGCT 61.843 66.667 0.00 0.00 34.56 4.40
607 2447 2.650813 ATTCCTCGATCAGGCCGTGC 62.651 60.000 0.00 0.00 43.08 5.34
608 2448 0.877649 CATTCCTCGATCAGGCCGTG 60.878 60.000 0.00 0.00 43.08 4.94
609 2449 1.443407 CATTCCTCGATCAGGCCGT 59.557 57.895 0.00 0.00 43.08 5.68
610 2450 1.301244 CCATTCCTCGATCAGGCCG 60.301 63.158 0.00 0.00 43.08 6.13
611 2451 0.250081 GTCCATTCCTCGATCAGGCC 60.250 60.000 0.00 0.00 43.08 5.19
612 2452 0.598680 CGTCCATTCCTCGATCAGGC 60.599 60.000 6.38 0.00 43.08 4.85
613 2453 0.032678 CCGTCCATTCCTCGATCAGG 59.967 60.000 5.18 5.18 45.15 3.86
614 2454 0.032678 CCCGTCCATTCCTCGATCAG 59.967 60.000 0.00 0.00 0.00 2.90
615 2455 0.396556 TCCCGTCCATTCCTCGATCA 60.397 55.000 0.00 0.00 0.00 2.92
616 2456 0.315568 CTCCCGTCCATTCCTCGATC 59.684 60.000 0.00 0.00 0.00 3.69
617 2457 0.106167 TCTCCCGTCCATTCCTCGAT 60.106 55.000 0.00 0.00 0.00 3.59
618 2458 0.106167 ATCTCCCGTCCATTCCTCGA 60.106 55.000 0.00 0.00 0.00 4.04
619 2459 0.032678 CATCTCCCGTCCATTCCTCG 59.967 60.000 0.00 0.00 0.00 4.63
620 2460 0.394565 CCATCTCCCGTCCATTCCTC 59.605 60.000 0.00 0.00 0.00 3.71
621 2461 1.056700 CCCATCTCCCGTCCATTCCT 61.057 60.000 0.00 0.00 0.00 3.36
622 2462 1.451936 CCCATCTCCCGTCCATTCC 59.548 63.158 0.00 0.00 0.00 3.01
623 2463 1.345715 ACCCCATCTCCCGTCCATTC 61.346 60.000 0.00 0.00 0.00 2.67
624 2464 0.919289 AACCCCATCTCCCGTCCATT 60.919 55.000 0.00 0.00 0.00 3.16
625 2465 1.307866 AACCCCATCTCCCGTCCAT 60.308 57.895 0.00 0.00 0.00 3.41
626 2466 2.124085 AACCCCATCTCCCGTCCA 59.876 61.111 0.00 0.00 0.00 4.02
627 2467 2.590092 CAACCCCATCTCCCGTCC 59.410 66.667 0.00 0.00 0.00 4.79
628 2468 2.124695 GCAACCCCATCTCCCGTC 60.125 66.667 0.00 0.00 0.00 4.79
629 2469 2.610859 AGCAACCCCATCTCCCGT 60.611 61.111 0.00 0.00 0.00 5.28
630 2470 2.124570 CAGCAACCCCATCTCCCG 60.125 66.667 0.00 0.00 0.00 5.14
631 2471 1.225704 CTCAGCAACCCCATCTCCC 59.774 63.158 0.00 0.00 0.00 4.30
632 2472 0.842635 ATCTCAGCAACCCCATCTCC 59.157 55.000 0.00 0.00 0.00 3.71
633 2473 1.964552 CATCTCAGCAACCCCATCTC 58.035 55.000 0.00 0.00 0.00 2.75
634 2474 0.106819 GCATCTCAGCAACCCCATCT 60.107 55.000 0.00 0.00 0.00 2.90
635 2475 0.394762 TGCATCTCAGCAACCCCATC 60.395 55.000 0.00 0.00 42.46 3.51
636 2476 1.693034 TGCATCTCAGCAACCCCAT 59.307 52.632 0.00 0.00 42.46 4.00
637 2477 3.169378 TGCATCTCAGCAACCCCA 58.831 55.556 0.00 0.00 42.46 4.96
644 2484 3.570638 ACGCGCATGCATCTCAGC 61.571 61.111 19.57 10.69 42.97 4.26
645 2485 2.169146 TCACGCGCATGCATCTCAG 61.169 57.895 19.57 0.51 42.97 3.35
646 2486 2.125592 TCACGCGCATGCATCTCA 60.126 55.556 19.57 0.00 42.97 3.27
647 2487 2.322422 GTCACGCGCATGCATCTC 59.678 61.111 19.57 2.33 42.97 2.75
648 2488 3.557479 CGTCACGCGCATGCATCT 61.557 61.111 19.57 0.00 42.97 2.90
649 2489 4.580044 CCGTCACGCGCATGCATC 62.580 66.667 19.57 7.71 42.97 3.91
659 2499 1.736645 ATTCTGTTCCGCCGTCACG 60.737 57.895 0.00 0.00 0.00 4.35
660 2500 0.669318 TCATTCTGTTCCGCCGTCAC 60.669 55.000 0.00 0.00 0.00 3.67
661 2501 0.034198 TTCATTCTGTTCCGCCGTCA 59.966 50.000 0.00 0.00 0.00 4.35
662 2502 1.153353 TTTCATTCTGTTCCGCCGTC 58.847 50.000 0.00 0.00 0.00 4.79
663 2503 1.468520 CATTTCATTCTGTTCCGCCGT 59.531 47.619 0.00 0.00 0.00 5.68
664 2504 1.202177 CCATTTCATTCTGTTCCGCCG 60.202 52.381 0.00 0.00 0.00 6.46
665 2505 2.091541 TCCATTTCATTCTGTTCCGCC 58.908 47.619 0.00 0.00 0.00 6.13
666 2506 3.009723 TCTCCATTTCATTCTGTTCCGC 58.990 45.455 0.00 0.00 0.00 5.54
667 2507 4.436050 CGTTCTCCATTTCATTCTGTTCCG 60.436 45.833 0.00 0.00 0.00 4.30
668 2508 4.695455 TCGTTCTCCATTTCATTCTGTTCC 59.305 41.667 0.00 0.00 0.00 3.62
669 2509 5.409826 ACTCGTTCTCCATTTCATTCTGTTC 59.590 40.000 0.00 0.00 0.00 3.18
670 2510 5.180117 CACTCGTTCTCCATTTCATTCTGTT 59.820 40.000 0.00 0.00 0.00 3.16
671 2511 4.692625 CACTCGTTCTCCATTTCATTCTGT 59.307 41.667 0.00 0.00 0.00 3.41
672 2512 4.093998 CCACTCGTTCTCCATTTCATTCTG 59.906 45.833 0.00 0.00 0.00 3.02
673 2513 4.256920 CCACTCGTTCTCCATTTCATTCT 58.743 43.478 0.00 0.00 0.00 2.40
674 2514 3.375299 CCCACTCGTTCTCCATTTCATTC 59.625 47.826 0.00 0.00 0.00 2.67
675 2515 3.244911 ACCCACTCGTTCTCCATTTCATT 60.245 43.478 0.00 0.00 0.00 2.57
676 2516 2.305927 ACCCACTCGTTCTCCATTTCAT 59.694 45.455 0.00 0.00 0.00 2.57
677 2517 1.697432 ACCCACTCGTTCTCCATTTCA 59.303 47.619 0.00 0.00 0.00 2.69
678 2518 2.347731 GACCCACTCGTTCTCCATTTC 58.652 52.381 0.00 0.00 0.00 2.17
679 2519 1.337823 CGACCCACTCGTTCTCCATTT 60.338 52.381 0.00 0.00 37.64 2.32
680 2520 0.246635 CGACCCACTCGTTCTCCATT 59.753 55.000 0.00 0.00 37.64 3.16
681 2521 1.890894 CGACCCACTCGTTCTCCAT 59.109 57.895 0.00 0.00 37.64 3.41
682 2522 2.927580 GCGACCCACTCGTTCTCCA 61.928 63.158 0.00 0.00 44.92 3.86
683 2523 2.126031 GCGACCCACTCGTTCTCC 60.126 66.667 0.00 0.00 44.92 3.71
684 2524 0.389948 AATGCGACCCACTCGTTCTC 60.390 55.000 0.00 0.00 44.92 2.87
685 2525 0.892755 TAATGCGACCCACTCGTTCT 59.107 50.000 0.00 0.00 44.92 3.01
686 2526 1.593006 CATAATGCGACCCACTCGTTC 59.407 52.381 0.00 0.00 44.92 3.95
687 2527 1.651987 CATAATGCGACCCACTCGTT 58.348 50.000 0.00 0.00 44.92 3.85
688 2528 0.179084 CCATAATGCGACCCACTCGT 60.179 55.000 0.00 0.00 44.92 4.18
689 2529 0.179084 ACCATAATGCGACCCACTCG 60.179 55.000 0.00 0.00 45.97 4.18
690 2530 2.480845 GTACCATAATGCGACCCACTC 58.519 52.381 0.00 0.00 0.00 3.51
691 2531 1.140252 GGTACCATAATGCGACCCACT 59.860 52.381 7.15 0.00 0.00 4.00
692 2532 1.589803 GGTACCATAATGCGACCCAC 58.410 55.000 7.15 0.00 0.00 4.61
707 2547 4.310769 CAGCTCTATATGCACTTGGGTAC 58.689 47.826 0.00 0.00 0.00 3.34
708 2548 3.244215 GCAGCTCTATATGCACTTGGGTA 60.244 47.826 0.00 0.00 42.11 3.69
709 2549 2.486191 GCAGCTCTATATGCACTTGGGT 60.486 50.000 0.00 0.00 42.11 4.51
710 2550 2.149578 GCAGCTCTATATGCACTTGGG 58.850 52.381 0.00 0.00 42.11 4.12
711 2551 2.149578 GGCAGCTCTATATGCACTTGG 58.850 52.381 0.00 0.00 44.37 3.61
782 2625 9.444600 TGTACGCATCTCTATGACTTGTATATA 57.555 33.333 0.00 0.00 34.84 0.86
783 2626 8.336801 TGTACGCATCTCTATGACTTGTATAT 57.663 34.615 0.00 0.00 34.84 0.86
946 2963 0.402121 AAGGTGCTGGGAGGAAGAAC 59.598 55.000 0.00 0.00 0.00 3.01
1493 3555 3.993081 GGACAATCATAGATCCAAGAGCG 59.007 47.826 0.00 0.00 0.00 5.03
1495 3557 5.922053 TGTGGACAATCATAGATCCAAGAG 58.078 41.667 0.00 0.00 42.79 2.85
1559 3629 7.538334 TGTTCGCTTGATATTTCATTTTGAGTG 59.462 33.333 0.00 0.00 0.00 3.51
1582 3682 3.443329 TGTGTGCTCATTGTGTTTCTGTT 59.557 39.130 0.00 0.00 0.00 3.16
1586 3686 3.313526 AGAGTGTGTGCTCATTGTGTTTC 59.686 43.478 0.00 0.00 37.94 2.78
1809 3998 3.118665 ACCAATGCCACCTTTAATGATGC 60.119 43.478 0.00 0.00 0.00 3.91
1902 4094 3.587797 ATGCATTCAGCCAACAGAAAG 57.412 42.857 0.00 0.00 44.83 2.62
2020 4214 4.849813 TGTGAGACAAGGGATCATGAAT 57.150 40.909 0.00 0.00 0.00 2.57
2152 4346 4.202161 CGTATATCAGTCACCTTTGGCTCT 60.202 45.833 0.00 0.00 34.53 4.09
2187 4381 7.517254 TCCCAATGATTTCTATCTCCAGGATTA 59.483 37.037 0.00 0.00 35.98 1.75
2190 4384 5.226803 TCCCAATGATTTCTATCTCCAGGA 58.773 41.667 0.00 0.00 0.00 3.86
2199 4393 6.209774 TCCTTAGTCCTCCCAATGATTTCTA 58.790 40.000 0.00 0.00 0.00 2.10
2248 4442 9.443283 GTGATATCTTTTGTCATGCTATCAAAC 57.557 33.333 3.98 0.00 32.08 2.93
2250 4444 8.735692 TGTGATATCTTTTGTCATGCTATCAA 57.264 30.769 3.98 0.00 0.00 2.57
2352 4547 4.273148 ACCCACACTTGAGAGTATTCAC 57.727 45.455 0.00 0.00 33.90 3.18
2429 4624 8.873830 CGCACTCTCTTTATCTTTCTTTGATAA 58.126 33.333 0.00 0.00 35.40 1.75
2435 4630 6.586844 GTGTACGCACTCTCTTTATCTTTCTT 59.413 38.462 0.39 0.00 42.13 2.52
2468 4663 8.469309 TTTTCAAGGGAATTATGGATCATCTC 57.531 34.615 0.00 0.00 31.93 2.75
2724 4963 8.041323 TGTTCCTTATCACCTCTAGATTCAAAC 58.959 37.037 0.00 0.00 0.00 2.93
2835 5074 1.358787 TCCCATTGACCAGGCTTCATT 59.641 47.619 0.00 0.00 0.00 2.57
2902 5141 6.288294 TGCAAGTACTTGTGTAGAAGATGTT 58.712 36.000 30.90 0.00 42.31 2.71
2920 5159 4.904241 AGCTTAACTTCAGAGATGCAAGT 58.096 39.130 0.00 0.00 31.48 3.16
3048 5297 2.037251 AGCTCGCAAGTAGAGAAACCAA 59.963 45.455 0.00 0.00 37.93 3.67
3049 5298 1.618837 AGCTCGCAAGTAGAGAAACCA 59.381 47.619 0.00 0.00 37.93 3.67
3050 5299 2.371910 AGCTCGCAAGTAGAGAAACC 57.628 50.000 0.00 0.00 37.93 3.27
3051 5300 2.413453 CCAAGCTCGCAAGTAGAGAAAC 59.587 50.000 0.00 0.00 37.93 2.78
3052 5301 2.037251 ACCAAGCTCGCAAGTAGAGAAA 59.963 45.455 0.00 0.00 37.93 2.52
3053 5302 1.618837 ACCAAGCTCGCAAGTAGAGAA 59.381 47.619 0.00 0.00 37.93 2.87
3054 5303 1.067565 CACCAAGCTCGCAAGTAGAGA 60.068 52.381 0.00 0.00 37.93 3.10
3055 5304 1.067565 TCACCAAGCTCGCAAGTAGAG 60.068 52.381 0.00 0.00 38.68 2.43
3056 5305 0.966179 TCACCAAGCTCGCAAGTAGA 59.034 50.000 0.00 0.00 39.48 2.59
3057 5306 1.067565 TCTCACCAAGCTCGCAAGTAG 60.068 52.381 0.00 0.00 39.48 2.57
3064 5313 5.812642 ACTAATGTATTTCTCACCAAGCTCG 59.187 40.000 0.00 0.00 0.00 5.03
3318 5581 4.401925 AGCAAATCTAGGGATATGTTGGC 58.598 43.478 0.00 0.00 0.00 4.52
3416 5686 4.357918 ACTAAAGACCTCAACTGTGCAT 57.642 40.909 0.00 0.00 0.00 3.96
3418 5688 3.184581 CGAACTAAAGACCTCAACTGTGC 59.815 47.826 0.00 0.00 0.00 4.57
3419 5689 3.184581 GCGAACTAAAGACCTCAACTGTG 59.815 47.826 0.00 0.00 0.00 3.66
3420 5690 3.181469 TGCGAACTAAAGACCTCAACTGT 60.181 43.478 0.00 0.00 0.00 3.55
3421 5691 3.390135 TGCGAACTAAAGACCTCAACTG 58.610 45.455 0.00 0.00 0.00 3.16
3422 5692 3.746045 TGCGAACTAAAGACCTCAACT 57.254 42.857 0.00 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.