Multiple sequence alignment - TraesCS1B01G469500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G469500 chr1B 100.000 9122 0 0 1 9122 678310480 678319601 0.000000e+00 16846.0
1 TraesCS1B01G469500 chr1B 92.847 6613 342 66 1504 8079 678790439 678783921 0.000000e+00 9470.0
2 TraesCS1B01G469500 chr1B 88.202 4026 350 61 4245 8205 678483060 678479095 0.000000e+00 4687.0
3 TraesCS1B01G469500 chr1B 93.831 2464 110 19 1304 3751 678606059 678603622 0.000000e+00 3670.0
4 TraesCS1B01G469500 chr1B 90.252 2698 225 20 5114 7801 678757763 678755094 0.000000e+00 3491.0
5 TraesCS1B01G469500 chr1B 88.322 2843 296 19 4982 7798 678720632 678717800 0.000000e+00 3378.0
6 TraesCS1B01G469500 chr1B 88.407 2838 280 26 4990 7798 641200575 641203392 0.000000e+00 3373.0
7 TraesCS1B01G469500 chr1B 94.575 2120 85 8 1637 3749 678406861 678408957 0.000000e+00 3251.0
8 TraesCS1B01G469500 chr1B 91.319 2419 137 32 1302 3699 678486016 678483650 0.000000e+00 3236.0
9 TraesCS1B01G469500 chr1B 87.280 2838 315 26 4982 7791 678441661 678438842 0.000000e+00 3199.0
10 TraesCS1B01G469500 chr1B 87.138 2830 320 30 4989 7791 678550073 678547261 0.000000e+00 3169.0
11 TraesCS1B01G469500 chr1B 95.047 1817 74 8 1801 3607 678738784 678736974 0.000000e+00 2843.0
12 TraesCS1B01G469500 chr1B 89.198 2120 191 25 4982 7095 641125546 641127633 0.000000e+00 2612.0
13 TraesCS1B01G469500 chr1B 93.227 1757 98 10 1302 3043 641197450 641199200 0.000000e+00 2566.0
14 TraesCS1B01G469500 chr1B 91.814 1759 123 12 1302 3046 678552841 678551090 0.000000e+00 2431.0
15 TraesCS1B01G469500 chr1B 95.860 1425 56 1 1801 3222 678444490 678443066 0.000000e+00 2302.0
16 TraesCS1B01G469500 chr1B 91.197 1613 115 11 2113 3702 641123346 641124954 0.000000e+00 2167.0
17 TraesCS1B01G469500 chr1B 91.189 1589 114 14 2135 3702 678409507 678411090 0.000000e+00 2135.0
18 TraesCS1B01G469500 chr1B 95.256 1349 61 1 4858 6206 678603226 678601881 0.000000e+00 2134.0
19 TraesCS1B01G469500 chr1B 89.955 1543 140 10 6267 7798 678601857 678600319 0.000000e+00 1977.0
20 TraesCS1B01G469500 chr1B 87.700 1439 162 11 4989 6417 678745162 678743729 0.000000e+00 1663.0
21 TraesCS1B01G469500 chr1B 86.619 1263 133 19 6544 7791 678751955 678750714 0.000000e+00 1363.0
22 TraesCS1B01G469500 chr1B 89.509 1039 74 12 6764 7792 678417255 678418268 0.000000e+00 1282.0
23 TraesCS1B01G469500 chr1B 91.278 837 57 6 1302 2126 641112133 641112965 0.000000e+00 1127.0
24 TraesCS1B01G469500 chr1B 92.455 782 40 10 3834 4609 678442429 678441661 0.000000e+00 1099.0
25 TraesCS1B01G469500 chr1B 91.184 760 34 11 3856 4609 678721364 678720632 0.000000e+00 1002.0
26 TraesCS1B01G469500 chr1B 87.448 725 49 8 603 1304 678740217 678739512 0.000000e+00 797.0
27 TraesCS1B01G469500 chr1B 94.488 508 21 4 3833 4334 678409002 678409508 0.000000e+00 776.0
28 TraesCS1B01G469500 chr1B 97.444 313 8 0 992 1304 678553306 678552994 1.350000e-147 534.0
29 TraesCS1B01G469500 chr1B 95.509 334 13 2 7982 8314 678575752 678575420 4.850000e-147 532.0
30 TraesCS1B01G469500 chr1B 89.671 426 31 11 882 1303 678765800 678765384 1.740000e-146 531.0
31 TraesCS1B01G469500 chr1B 97.115 312 9 0 992 1303 678486518 678486207 2.260000e-145 527.0
32 TraesCS1B01G469500 chr1B 96.417 307 11 0 997 1303 678790842 678790536 2.940000e-139 507.0
33 TraesCS1B01G469500 chr1B 95.833 312 13 0 992 1303 678606537 678606226 1.060000e-138 505.0
34 TraesCS1B01G469500 chr1B 96.104 308 12 0 997 1304 678753065 678752758 3.800000e-138 503.0
35 TraesCS1B01G469500 chr1B 84.375 544 47 16 4596 5136 678411239 678411747 4.920000e-137 499.0
36 TraesCS1B01G469500 chr1B 90.601 383 27 5 926 1304 678445603 678445226 4.920000e-137 499.0
37 TraesCS1B01G469500 chr1B 93.417 319 19 1 3433 3751 678442789 678442473 1.070000e-128 472.0
38 TraesCS1B01G469500 chr1B 91.803 305 22 2 1415 1719 678752510 678752209 1.100000e-113 422.0
39 TraesCS1B01G469500 chr1B 93.333 285 9 4 3277 3554 678443070 678442789 6.590000e-111 412.0
40 TraesCS1B01G469500 chr1B 81.061 396 30 22 8573 8959 641137048 641137407 3.240000e-69 274.0
41 TraesCS1B01G469500 chr1B 80.851 329 34 13 8637 8962 678831140 678830838 1.980000e-56 231.0
42 TraesCS1B01G469500 chr1B 80.531 339 32 13 8622 8958 678323783 678324089 7.120000e-56 230.0
43 TraesCS1B01G469500 chr1B 93.151 146 8 2 4227 4372 641125229 641125372 7.170000e-51 213.0
44 TraesCS1B01G469500 chr1B 94.853 136 7 0 3606 3741 678733894 678733759 7.170000e-51 213.0
45 TraesCS1B01G469500 chr1B 91.892 148 10 2 7826 7973 678717687 678717542 1.200000e-48 206.0
46 TraesCS1B01G469500 chr1B 81.818 231 21 13 4036 4254 678483350 678483129 3.390000e-39 174.0
47 TraesCS1B01G469500 chr1B 78.827 307 23 12 8637 8940 641204625 641204892 1.580000e-37 169.0
48 TraesCS1B01G469500 chr1B 85.235 149 10 6 4461 4609 641125410 641125546 9.550000e-30 143.0
49 TraesCS1B01G469500 chr1B 83.007 153 19 5 7823 7973 678750575 678750428 2.070000e-26 132.0
50 TraesCS1B01G469500 chr1B 82.353 153 20 6 7823 7973 678547122 678546975 9.620000e-25 126.0
51 TraesCS1B01G469500 chr1B 89.691 97 6 3 4014 4109 431331727 431331634 4.470000e-23 121.0
52 TraesCS1B01G469500 chr1B 92.593 81 6 0 7718 7798 678576134 678576054 5.790000e-22 117.0
53 TraesCS1B01G469500 chr1B 82.394 142 15 3 7832 7973 678418393 678418524 2.080000e-21 115.0
54 TraesCS1B01G469500 chr1B 83.333 132 5 5 1302 1418 678739323 678739194 1.250000e-18 106.0
55 TraesCS1B01G469500 chr1B 90.909 77 6 1 9046 9122 678694405 678694330 1.620000e-17 102.0
56 TraesCS1B01G469500 chr1B 88.000 75 8 1 8959 9033 641137449 641137522 4.540000e-13 87.9
57 TraesCS1B01G469500 chr1B 88.732 71 8 0 9050 9120 641205046 641205116 4.540000e-13 87.9
58 TraesCS1B01G469500 chr1B 80.916 131 8 5 1303 1418 678445034 678444906 4.540000e-13 87.9
59 TraesCS1B01G469500 chr1B 87.671 73 5 1 8961 9033 678324117 678324185 2.110000e-11 82.4
60 TraesCS1B01G469500 chr1B 84.211 76 8 3 8598 8669 678478427 678478352 4.570000e-08 71.3
61 TraesCS1B01G469500 chr1B 100.000 36 0 0 3923 3958 678483645 678483610 5.910000e-07 67.6
62 TraesCS1B01G469500 chr1B 82.500 80 8 4 8954 9033 678913819 678913746 2.130000e-06 65.8
63 TraesCS1B01G469500 chr1A 90.954 3029 221 16 4795 7798 584861811 584864811 0.000000e+00 4026.0
64 TraesCS1B01G469500 chr1A 92.134 2123 120 15 1302 3404 584847239 584849334 0.000000e+00 2952.0
65 TraesCS1B01G469500 chr1A 87.725 611 57 12 7825 8425 584864924 584865526 0.000000e+00 697.0
66 TraesCS1B01G469500 chr1A 90.000 450 35 6 7982 8422 585218728 585219176 2.860000e-159 573.0
67 TraesCS1B01G469500 chr1A 81.596 451 43 19 8460 8898 585219266 585219688 4.080000e-88 337.0
68 TraesCS1B01G469500 chr1A 87.043 301 28 5 4247 4543 584861352 584861645 6.830000e-86 329.0
69 TraesCS1B01G469500 chr1A 92.920 113 7 1 6 117 343629246 343629358 7.330000e-36 163.0
70 TraesCS1B01G469500 chr1A 89.888 89 5 2 3415 3502 584854628 584854713 2.690000e-20 111.0
71 TraesCS1B01G469500 chr1A 87.879 66 8 0 8959 9024 585219773 585219838 2.730000e-10 78.7
72 TraesCS1B01G469500 chr1A 94.872 39 2 0 4209 4247 584856108 584856146 2.750000e-05 62.1
73 TraesCS1B01G469500 chr1A 88.000 50 3 3 7927 7974 585218638 585218686 1.000000e-03 56.5
74 TraesCS1B01G469500 chr1D 90.580 2792 236 19 5024 7798 487280364 487283145 0.000000e+00 3674.0
75 TraesCS1B01G469500 chr1D 92.966 2431 126 17 1302 3702 487275608 487278023 0.000000e+00 3500.0
76 TraesCS1B01G469500 chr1D 81.148 1533 260 16 6276 7792 487291732 487293251 0.000000e+00 1203.0
77 TraesCS1B01G469500 chr1D 91.111 540 35 9 4011 4543 487278036 487278569 0.000000e+00 719.0
78 TraesCS1B01G469500 chr1D 89.670 455 23 11 4587 5036 487278575 487279010 8.000000e-155 558.0
79 TraesCS1B01G469500 chr1D 90.705 312 29 0 992 1303 487275107 487275418 5.100000e-112 416.0
80 TraesCS1B01G469500 chr1D 84.802 329 24 8 8373 8680 487284241 487284564 3.200000e-79 307.0
81 TraesCS1B01G469500 chr1D 94.000 100 5 1 3914 4013 487278016 487278114 5.710000e-32 150.0
82 TraesCS1B01G469500 chr1D 93.182 88 5 1 8855 8941 487321832 487321919 2.670000e-25 128.0
83 TraesCS1B01G469500 chr1D 90.541 74 7 0 7719 7792 487320050 487320123 2.100000e-16 99.0
84 TraesCS1B01G469500 chr1D 91.525 59 4 1 8959 9017 487321973 487322030 7.590000e-11 80.5
85 TraesCS1B01G469500 chr1D 97.297 37 1 0 8693 8729 487321709 487321745 7.650000e-06 63.9
86 TraesCS1B01G469500 chr3B 99.242 132 1 0 1 132 23154340 23154209 1.180000e-58 239.0
87 TraesCS1B01G469500 chr5B 95.455 132 6 0 1 132 86250957 86250826 2.580000e-50 211.0
88 TraesCS1B01G469500 chr5B 88.636 132 14 1 1 132 532822215 532822345 9.480000e-35 159.0
89 TraesCS1B01G469500 chr6B 94.737 133 6 1 1 132 498276817 498276685 1.200000e-48 206.0
90 TraesCS1B01G469500 chr6B 93.939 132 8 0 1 132 84749905 84749774 5.590000e-47 200.0
91 TraesCS1B01G469500 chr6B 87.654 81 10 0 3833 3913 512239477 512239557 2.710000e-15 95.3
92 TraesCS1B01G469500 chr2A 93.805 113 6 1 6 117 758807760 758807648 1.580000e-37 169.0
93 TraesCS1B01G469500 chr7A 90.991 111 10 0 6 116 57250703 57250813 5.710000e-32 150.0
94 TraesCS1B01G469500 chr6A 90.090 111 11 0 6 116 542253645 542253755 2.650000e-30 145.0
95 TraesCS1B01G469500 chr7D 82.353 170 19 8 3939 4105 47416218 47416057 4.440000e-28 137.0
96 TraesCS1B01G469500 chr3D 85.827 127 16 1 1366 1490 539575997 539576123 5.750000e-27 134.0
97 TraesCS1B01G469500 chr3D 90.625 96 5 4 4002 4096 43577833 43577925 3.460000e-24 124.0
98 TraesCS1B01G469500 chr7B 91.489 94 4 4 4015 4104 588501279 588501372 9.620000e-25 126.0
99 TraesCS1B01G469500 chr7B 93.333 45 3 0 3297 3341 660641198 660641154 5.910000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G469500 chr1B 678310480 678319601 9121 False 16846.000000 16846 100.000000 1 9122 1 chr1B.!!$F2 9121
1 TraesCS1B01G469500 chr1B 678783921 678790842 6921 True 4988.500000 9470 94.632000 997 8079 2 chr1B.!!$R14 7082
2 TraesCS1B01G469500 chr1B 678600319 678606537 6218 True 2071.500000 3670 93.718750 992 7798 4 chr1B.!!$R10 6806
3 TraesCS1B01G469500 chr1B 678406861 678411747 4886 False 1665.250000 3251 91.156750 1637 5136 4 chr1B.!!$F7 3499
4 TraesCS1B01G469500 chr1B 678546975 678553306 6331 True 1565.000000 3169 89.687250 992 7973 4 chr1B.!!$R8 6981
5 TraesCS1B01G469500 chr1B 641197450 641205116 7666 False 1548.975000 3373 87.298250 1302 9120 4 chr1B.!!$F5 7818
6 TraesCS1B01G469500 chr1B 678717542 678721364 3822 True 1528.666667 3378 90.466000 3856 7973 3 chr1B.!!$R11 4117
7 TraesCS1B01G469500 chr1B 678478352 678486518 8166 True 1460.483333 4687 90.444167 992 8669 6 chr1B.!!$R7 7677
8 TraesCS1B01G469500 chr1B 641123346 641127633 4287 False 1283.750000 2612 89.695250 2113 7095 4 chr1B.!!$F3 4982
9 TraesCS1B01G469500 chr1B 678750428 678757763 7335 True 1182.200000 3491 89.557000 997 7973 5 chr1B.!!$R13 6976
10 TraesCS1B01G469500 chr1B 678438842 678445603 6761 True 1152.985714 3199 90.551714 926 7791 7 chr1B.!!$R6 6865
11 TraesCS1B01G469500 chr1B 641112133 641112965 832 False 1127.000000 1127 91.278000 1302 2126 1 chr1B.!!$F1 824
12 TraesCS1B01G469500 chr1B 678733759 678745162 11403 True 1124.400000 2843 89.676200 603 6417 5 chr1B.!!$R12 5814
13 TraesCS1B01G469500 chr1B 678417255 678418524 1269 False 698.500000 1282 85.951500 6764 7973 2 chr1B.!!$F8 1209
14 TraesCS1B01G469500 chr1B 678575420 678576134 714 True 324.500000 532 94.051000 7718 8314 2 chr1B.!!$R9 596
15 TraesCS1B01G469500 chr1A 584847239 584849334 2095 False 2952.000000 2952 92.134000 1302 3404 1 chr1A.!!$F2 2102
16 TraesCS1B01G469500 chr1A 584861352 584865526 4174 False 1684.000000 4026 88.574000 4247 8425 3 chr1A.!!$F4 4178
17 TraesCS1B01G469500 chr1A 585218638 585219838 1200 False 261.300000 573 86.868750 7927 9024 4 chr1A.!!$F5 1097
18 TraesCS1B01G469500 chr1D 487275107 487284564 9457 False 1332.000000 3674 90.547714 992 8680 7 chr1D.!!$F2 7688
19 TraesCS1B01G469500 chr1D 487291732 487293251 1519 False 1203.000000 1203 81.148000 6276 7792 1 chr1D.!!$F1 1516

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
471 472 0.027979 CTCGCTCGCTCTCTCTCAAG 59.972 60.000 0.00 0.00 0.00 3.02 F
658 5002 0.034670 ATCCTTGCTTGCTCAGGGAC 60.035 55.000 7.07 0.00 43.65 4.46 F
907 5273 0.820871 AGCTTCAGTCAGATCCCGTC 59.179 55.000 0.00 0.00 0.00 4.79 F
1348 5970 0.968405 TGTTTGGCTTGATCTTGGCC 59.032 50.000 14.25 14.25 45.45 5.36 F
2392 7138 3.565307 ACATGTGGGAAGACAACATGTT 58.435 40.909 13.26 4.92 46.04 2.71 F
3743 11771 0.944311 TAGCGCCGCTAATAGCAAGC 60.944 55.000 17.75 12.85 42.58 4.01 F
4543 13319 0.533531 TCTAATGATGCAGGCTGCCG 60.534 55.000 34.58 14.69 44.23 5.69 F
6180 17599 0.179062 AGTTCGCTGCCAGATGATCC 60.179 55.000 0.00 0.00 0.00 3.36 F
7440 18890 0.618458 TGGCTAGGCGAATTGACCTT 59.382 50.000 12.19 0.00 37.50 3.50 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1549 6287 3.846588 ACCATGTCTAGTTCATCCAAGGT 59.153 43.478 0.00 0.00 0.00 3.50 R
2373 7119 4.214310 TGAAACATGTTGTCTTCCCACAT 58.786 39.130 12.82 0.00 0.00 3.21 R
2717 7463 1.214175 TCCAAAGAAGGTGCAGTCCAA 59.786 47.619 0.00 0.00 0.00 3.53 R
3132 7898 3.207265 TGGAAAAGCTGCACTGTAAGA 57.793 42.857 1.02 0.00 37.43 2.10 R
3735 11763 0.737715 GCGGCGCTATAGCTTGCTAT 60.738 55.000 26.86 17.67 39.32 2.97 R
4866 14880 0.102300 GGTTCTTTTGCGCCAGTGTT 59.898 50.000 4.18 0.00 0.00 3.32 R
6217 17636 1.414158 TCCGATCATCCAAGGACCTC 58.586 55.000 0.00 0.00 0.00 3.85 R
7614 19065 0.252239 TAGAGAGGTGGGCAGAGCAA 60.252 55.000 0.00 0.00 0.00 3.91 R
8775 25568 0.240678 CGATCGAGCAGAGGATCAGG 59.759 60.000 10.26 0.00 39.16 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 6.261118 GCCTTAGCAAAACATTGTATCAGAG 58.739 40.000 0.00 0.00 39.53 3.35
26 27 6.127897 GCCTTAGCAAAACATTGTATCAGAGT 60.128 38.462 0.00 0.00 39.53 3.24
27 28 7.575720 GCCTTAGCAAAACATTGTATCAGAGTT 60.576 37.037 0.00 0.00 39.53 3.01
49 50 8.990163 AGTTAAAAAGTCTGAAGTATGGGAAA 57.010 30.769 0.00 0.00 0.00 3.13
51 52 9.459640 GTTAAAAAGTCTGAAGTATGGGAAAAC 57.540 33.333 0.00 0.00 0.00 2.43
53 54 7.839680 AAAAGTCTGAAGTATGGGAAAACAT 57.160 32.000 0.00 0.00 34.90 2.71
54 55 7.454260 AAAGTCTGAAGTATGGGAAAACATC 57.546 36.000 0.00 0.00 32.39 3.06
70 71 7.539436 GGAAAACATCCCTGACTTTATTCTTC 58.461 38.462 0.00 0.00 43.00 2.87
71 72 7.176690 GGAAAACATCCCTGACTTTATTCTTCA 59.823 37.037 0.00 0.00 43.00 3.02
73 74 7.872113 AACATCCCTGACTTTATTCTTCATC 57.128 36.000 0.00 0.00 0.00 2.92
75 76 7.278875 ACATCCCTGACTTTATTCTTCATCTC 58.721 38.462 0.00 0.00 0.00 2.75
76 77 6.240549 TCCCTGACTTTATTCTTCATCTCC 57.759 41.667 0.00 0.00 0.00 3.71
77 78 5.966935 TCCCTGACTTTATTCTTCATCTCCT 59.033 40.000 0.00 0.00 0.00 3.69
78 79 6.445139 TCCCTGACTTTATTCTTCATCTCCTT 59.555 38.462 0.00 0.00 0.00 3.36
79 80 6.541641 CCCTGACTTTATTCTTCATCTCCTTG 59.458 42.308 0.00 0.00 0.00 3.61
85 86 8.936864 ACTTTATTCTTCATCTCCTTGTAAACG 58.063 33.333 0.00 0.00 0.00 3.60
88 89 9.667107 TTATTCTTCATCTCCTTGTAAACGATT 57.333 29.630 0.00 0.00 0.00 3.34
89 90 7.979444 TTCTTCATCTCCTTGTAAACGATTT 57.021 32.000 0.00 0.00 0.00 2.17
92 93 4.394920 TCATCTCCTTGTAAACGATTTGGC 59.605 41.667 0.00 0.00 0.00 4.52
93 94 4.015872 TCTCCTTGTAAACGATTTGGCT 57.984 40.909 0.00 0.00 0.00 4.75
96 97 5.815740 TCTCCTTGTAAACGATTTGGCTATC 59.184 40.000 0.00 0.00 0.00 2.08
98 99 6.119536 TCCTTGTAAACGATTTGGCTATCAT 58.880 36.000 0.00 0.00 0.00 2.45
102 103 7.384439 TGTAAACGATTTGGCTATCATTTGA 57.616 32.000 0.00 0.00 0.00 2.69
104 105 7.914871 TGTAAACGATTTGGCTATCATTTGATG 59.085 33.333 3.30 0.00 36.05 3.07
107 108 7.281040 ACGATTTGGCTATCATTTGATGAAT 57.719 32.000 3.30 0.00 43.50 2.57
108 109 8.394971 ACGATTTGGCTATCATTTGATGAATA 57.605 30.769 3.30 0.00 43.50 1.75
110 111 9.681692 CGATTTGGCTATCATTTGATGAATAAA 57.318 29.630 3.30 1.69 43.50 1.40
145 146 3.021451 AAAAAGTCAGTGGCTCGGG 57.979 52.632 0.00 0.00 0.00 5.14
146 147 0.537371 AAAAAGTCAGTGGCTCGGGG 60.537 55.000 0.00 0.00 0.00 5.73
148 149 3.846405 AAGTCAGTGGCTCGGGGGA 62.846 63.158 0.00 0.00 0.00 4.81
151 152 1.923395 TCAGTGGCTCGGGGGATTT 60.923 57.895 0.00 0.00 0.00 2.17
152 153 1.750399 CAGTGGCTCGGGGGATTTG 60.750 63.158 0.00 0.00 0.00 2.32
153 154 2.440247 GTGGCTCGGGGGATTTGG 60.440 66.667 0.00 0.00 0.00 3.28
154 155 2.612430 TGGCTCGGGGGATTTGGA 60.612 61.111 0.00 0.00 0.00 3.53
156 157 1.453928 GGCTCGGGGGATTTGGAAG 60.454 63.158 0.00 0.00 0.00 3.46
157 158 1.453928 GCTCGGGGGATTTGGAAGG 60.454 63.158 0.00 0.00 0.00 3.46
158 159 1.921869 GCTCGGGGGATTTGGAAGGA 61.922 60.000 0.00 0.00 0.00 3.36
159 160 0.181350 CTCGGGGGATTTGGAAGGAG 59.819 60.000 0.00 0.00 0.00 3.69
163 164 1.357761 GGGGGATTTGGAAGGAGTGAA 59.642 52.381 0.00 0.00 0.00 3.18
164 165 2.225267 GGGGGATTTGGAAGGAGTGAAA 60.225 50.000 0.00 0.00 0.00 2.69
165 166 2.826128 GGGGATTTGGAAGGAGTGAAAC 59.174 50.000 0.00 0.00 0.00 2.78
168 169 4.082026 GGGATTTGGAAGGAGTGAAACATG 60.082 45.833 0.00 0.00 41.43 3.21
169 170 4.488879 GATTTGGAAGGAGTGAAACATGC 58.511 43.478 0.00 0.00 41.43 4.06
172 173 1.734465 GGAAGGAGTGAAACATGCGAG 59.266 52.381 0.00 0.00 41.43 5.03
173 174 2.417719 GAAGGAGTGAAACATGCGAGT 58.582 47.619 0.00 0.00 41.43 4.18
174 175 2.086054 AGGAGTGAAACATGCGAGTC 57.914 50.000 0.00 0.00 41.43 3.36
175 176 1.620819 AGGAGTGAAACATGCGAGTCT 59.379 47.619 0.00 0.00 41.43 3.24
176 177 2.037772 AGGAGTGAAACATGCGAGTCTT 59.962 45.455 0.00 0.00 41.43 3.01
177 178 2.413453 GGAGTGAAACATGCGAGTCTTC 59.587 50.000 0.00 0.00 41.43 2.87
178 179 3.059884 GAGTGAAACATGCGAGTCTTCA 58.940 45.455 0.00 0.00 41.43 3.02
179 180 3.466836 AGTGAAACATGCGAGTCTTCAA 58.533 40.909 0.00 0.00 41.43 2.69
180 181 3.496130 AGTGAAACATGCGAGTCTTCAAG 59.504 43.478 0.00 0.00 41.43 3.02
181 182 3.494626 GTGAAACATGCGAGTCTTCAAGA 59.505 43.478 0.00 0.00 36.32 3.02
183 184 4.024893 TGAAACATGCGAGTCTTCAAGAAC 60.025 41.667 0.00 0.00 0.00 3.01
185 186 3.466836 ACATGCGAGTCTTCAAGAACAA 58.533 40.909 0.00 0.00 0.00 2.83
186 187 3.876914 ACATGCGAGTCTTCAAGAACAAA 59.123 39.130 0.00 0.00 0.00 2.83
187 188 4.516698 ACATGCGAGTCTTCAAGAACAAAT 59.483 37.500 0.00 0.00 0.00 2.32
188 189 4.732285 TGCGAGTCTTCAAGAACAAATC 57.268 40.909 0.00 0.00 0.00 2.17
189 190 4.126437 TGCGAGTCTTCAAGAACAAATCA 58.874 39.130 0.00 0.00 0.00 2.57
190 191 4.574421 TGCGAGTCTTCAAGAACAAATCAA 59.426 37.500 0.00 0.00 0.00 2.57
191 192 4.906437 GCGAGTCTTCAAGAACAAATCAAC 59.094 41.667 0.00 0.00 0.00 3.18
192 193 5.504010 GCGAGTCTTCAAGAACAAATCAACA 60.504 40.000 0.00 0.00 0.00 3.33
193 194 6.486248 CGAGTCTTCAAGAACAAATCAACAA 58.514 36.000 0.00 0.00 0.00 2.83
194 195 7.134815 CGAGTCTTCAAGAACAAATCAACAAT 58.865 34.615 0.00 0.00 0.00 2.71
195 196 7.112565 CGAGTCTTCAAGAACAAATCAACAATG 59.887 37.037 0.00 0.00 0.00 2.82
196 197 6.698766 AGTCTTCAAGAACAAATCAACAATGC 59.301 34.615 0.00 0.00 0.00 3.56
199 200 5.291178 TCAAGAACAAATCAACAATGCCAG 58.709 37.500 0.00 0.00 0.00 4.85
200 201 5.068855 TCAAGAACAAATCAACAATGCCAGA 59.931 36.000 0.00 0.00 0.00 3.86
201 202 5.130292 AGAACAAATCAACAATGCCAGAG 57.870 39.130 0.00 0.00 0.00 3.35
202 203 4.586001 AGAACAAATCAACAATGCCAGAGT 59.414 37.500 0.00 0.00 0.00 3.24
205 206 4.586001 ACAAATCAACAATGCCAGAGTCTT 59.414 37.500 0.00 0.00 0.00 3.01
207 208 3.490439 TCAACAATGCCAGAGTCTTGA 57.510 42.857 0.00 0.00 0.00 3.02
209 210 3.144506 CAACAATGCCAGAGTCTTGAGT 58.855 45.455 0.00 0.00 0.00 3.41
210 211 3.051081 ACAATGCCAGAGTCTTGAGTC 57.949 47.619 0.00 0.00 0.00 3.36
212 213 3.072184 ACAATGCCAGAGTCTTGAGTCTT 59.928 43.478 5.32 0.00 0.00 3.01
213 214 4.070716 CAATGCCAGAGTCTTGAGTCTTT 58.929 43.478 5.32 0.00 0.00 2.52
214 215 5.221722 ACAATGCCAGAGTCTTGAGTCTTTA 60.222 40.000 5.32 0.00 0.00 1.85
217 218 5.869579 TGCCAGAGTCTTGAGTCTTTATTT 58.130 37.500 5.32 0.00 0.00 1.40
218 219 6.299141 TGCCAGAGTCTTGAGTCTTTATTTT 58.701 36.000 5.32 0.00 0.00 1.82
219 220 7.450074 TGCCAGAGTCTTGAGTCTTTATTTTA 58.550 34.615 5.32 0.00 0.00 1.52
220 221 8.103305 TGCCAGAGTCTTGAGTCTTTATTTTAT 58.897 33.333 5.32 0.00 0.00 1.40
221 222 8.951243 GCCAGAGTCTTGAGTCTTTATTTTATT 58.049 33.333 5.32 0.00 0.00 1.40
258 259 7.693969 ATCCTAGGAGCAATAAAACATATGC 57.306 36.000 18.34 0.00 39.06 3.14
259 260 5.700832 TCCTAGGAGCAATAAAACATATGCG 59.299 40.000 7.62 0.00 43.39 4.73
262 263 5.126067 AGGAGCAATAAAACATATGCGAGT 58.874 37.500 1.58 0.00 43.39 4.18
263 264 5.590259 AGGAGCAATAAAACATATGCGAGTT 59.410 36.000 1.58 0.00 43.39 3.01
264 265 6.095440 AGGAGCAATAAAACATATGCGAGTTT 59.905 34.615 1.58 1.51 43.39 2.66
266 267 7.044052 GGAGCAATAAAACATATGCGAGTTTTC 60.044 37.037 1.58 0.00 44.26 2.29
267 268 6.751888 AGCAATAAAACATATGCGAGTTTTCC 59.248 34.615 1.58 0.00 44.26 3.13
269 270 7.913297 GCAATAAAACATATGCGAGTTTTCCTA 59.087 33.333 1.58 0.00 44.26 2.94
271 272 8.732746 ATAAAACATATGCGAGTTTTCCTACT 57.267 30.769 1.58 0.00 44.26 2.57
272 273 9.826574 ATAAAACATATGCGAGTTTTCCTACTA 57.173 29.630 1.58 0.00 44.26 1.82
273 274 7.772332 AAACATATGCGAGTTTTCCTACTAG 57.228 36.000 1.58 0.00 34.51 2.57
274 275 6.466885 ACATATGCGAGTTTTCCTACTAGT 57.533 37.500 1.58 0.00 0.00 2.57
275 276 6.875076 ACATATGCGAGTTTTCCTACTAGTT 58.125 36.000 0.00 0.00 0.00 2.24
276 277 6.757010 ACATATGCGAGTTTTCCTACTAGTTG 59.243 38.462 0.00 0.00 0.00 3.16
277 278 4.595762 TGCGAGTTTTCCTACTAGTTGT 57.404 40.909 0.00 0.00 0.00 3.32
278 279 4.952460 TGCGAGTTTTCCTACTAGTTGTT 58.048 39.130 0.00 0.00 0.00 2.83
279 280 5.362263 TGCGAGTTTTCCTACTAGTTGTTT 58.638 37.500 0.00 0.00 0.00 2.83
280 281 5.818857 TGCGAGTTTTCCTACTAGTTGTTTT 59.181 36.000 0.00 0.00 0.00 2.43
283 284 7.677982 GCGAGTTTTCCTACTAGTTGTTTTTGT 60.678 37.037 0.00 0.00 0.00 2.83
285 286 9.850628 GAGTTTTCCTACTAGTTGTTTTTGTTT 57.149 29.630 0.00 0.00 0.00 2.83
286 287 9.634163 AGTTTTCCTACTAGTTGTTTTTGTTTG 57.366 29.630 0.00 0.00 0.00 2.93
287 288 9.628746 GTTTTCCTACTAGTTGTTTTTGTTTGA 57.371 29.630 0.00 0.00 0.00 2.69
289 290 9.849166 TTTCCTACTAGTTGTTTTTGTTTGAAG 57.151 29.630 0.00 0.00 0.00 3.02
291 292 8.671028 TCCTACTAGTTGTTTTTGTTTGAAGTC 58.329 33.333 0.00 0.00 0.00 3.01
295 296 9.191995 ACTAGTTGTTTTTGTTTGAAGTCTTTG 57.808 29.630 0.00 0.00 0.00 2.77
298 299 8.888716 AGTTGTTTTTGTTTGAAGTCTTTGTTT 58.111 25.926 0.00 0.00 0.00 2.83
300 301 8.425577 TGTTTTTGTTTGAAGTCTTTGTTTCA 57.574 26.923 0.00 0.00 0.00 2.69
301 302 9.050601 TGTTTTTGTTTGAAGTCTTTGTTTCAT 57.949 25.926 0.00 0.00 33.68 2.57
302 303 9.877137 GTTTTTGTTTGAAGTCTTTGTTTCATT 57.123 25.926 0.00 0.00 33.68 2.57
315 316 8.275632 GTCTTTGTTTCATTTTATTGAAGGCAC 58.724 33.333 0.00 0.00 36.97 5.01
317 318 5.837437 TGTTTCATTTTATTGAAGGCACGT 58.163 33.333 0.00 0.00 36.97 4.49
318 319 5.689514 TGTTTCATTTTATTGAAGGCACGTG 59.310 36.000 12.28 12.28 36.97 4.49
319 320 4.433186 TCATTTTATTGAAGGCACGTGG 57.567 40.909 18.88 0.00 0.00 4.94
320 321 2.715737 TTTTATTGAAGGCACGTGGC 57.284 45.000 32.77 32.77 43.74 5.01
321 322 7.237071 TTCATTTTATTGAAGGCACGTGGCA 62.237 40.000 38.86 22.13 43.86 4.92
322 323 8.621304 TTCATTTTATTGAAGGCACGTGGCAA 62.621 38.462 38.86 26.55 43.86 4.52
323 324 9.977397 TTCATTTTATTGAAGGCACGTGGCAAA 62.977 37.037 38.86 29.23 43.86 3.68
329 330 2.336088 GCACGTGGCAAAGCACAT 59.664 55.556 18.88 0.00 43.97 3.21
330 331 2.017783 GCACGTGGCAAAGCACATG 61.018 57.895 18.88 0.00 43.97 3.21
331 332 1.372004 CACGTGGCAAAGCACATGG 60.372 57.895 7.95 0.00 0.00 3.66
333 334 1.372004 CGTGGCAAAGCACATGGTG 60.372 57.895 0.00 0.00 36.51 4.17
334 335 1.741525 GTGGCAAAGCACATGGTGT 59.258 52.632 0.00 0.00 35.75 4.16
335 336 0.318955 GTGGCAAAGCACATGGTGTC 60.319 55.000 0.00 0.00 35.75 3.67
336 337 1.081242 GGCAAAGCACATGGTGTCG 60.081 57.895 0.00 0.00 35.75 4.35
337 338 1.081242 GCAAAGCACATGGTGTCGG 60.081 57.895 0.00 0.00 35.75 4.79
338 339 1.795170 GCAAAGCACATGGTGTCGGT 61.795 55.000 0.00 0.00 35.75 4.69
339 340 0.238289 CAAAGCACATGGTGTCGGTC 59.762 55.000 0.00 0.00 35.75 4.79
341 342 2.357034 GCACATGGTGTCGGTCGT 60.357 61.111 0.00 0.00 35.75 4.34
342 343 1.080366 GCACATGGTGTCGGTCGTA 60.080 57.895 0.00 0.00 35.75 3.43
343 344 0.459585 GCACATGGTGTCGGTCGTAT 60.460 55.000 0.00 0.00 35.75 3.06
344 345 2.004583 CACATGGTGTCGGTCGTATT 57.995 50.000 0.00 0.00 0.00 1.89
345 346 2.736081 GCACATGGTGTCGGTCGTATTA 60.736 50.000 0.00 0.00 35.75 0.98
346 347 3.713288 CACATGGTGTCGGTCGTATTAT 58.287 45.455 0.00 0.00 0.00 1.28
348 349 3.382227 ACATGGTGTCGGTCGTATTATGA 59.618 43.478 0.00 0.00 0.00 2.15
349 350 4.142116 ACATGGTGTCGGTCGTATTATGAA 60.142 41.667 0.00 0.00 0.00 2.57
351 352 5.771153 TGGTGTCGGTCGTATTATGAATA 57.229 39.130 0.00 0.00 0.00 1.75
352 353 6.146601 TGGTGTCGGTCGTATTATGAATAA 57.853 37.500 0.00 0.00 0.00 1.40
353 354 6.751157 TGGTGTCGGTCGTATTATGAATAAT 58.249 36.000 1.44 1.44 36.89 1.28
354 355 6.864685 TGGTGTCGGTCGTATTATGAATAATC 59.135 38.462 0.00 0.00 34.91 1.75
355 356 6.864685 GGTGTCGGTCGTATTATGAATAATCA 59.135 38.462 0.00 0.00 40.57 2.57
356 357 7.383029 GGTGTCGGTCGTATTATGAATAATCAA 59.617 37.037 0.00 0.00 39.49 2.57
358 359 9.135843 TGTCGGTCGTATTATGAATAATCAATC 57.864 33.333 0.00 0.00 39.49 2.67
359 360 8.592998 GTCGGTCGTATTATGAATAATCAATCC 58.407 37.037 0.00 0.14 39.49 3.01
360 361 8.308207 TCGGTCGTATTATGAATAATCAATCCA 58.692 33.333 0.00 0.00 39.49 3.41
361 362 9.098355 CGGTCGTATTATGAATAATCAATCCAT 57.902 33.333 0.00 0.00 39.49 3.41
390 391 8.757982 ATGGATGCAAATCATAAGTTAAGACT 57.242 30.769 0.00 0.00 35.05 3.24
392 393 9.023962 TGGATGCAAATCATAAGTTAAGACTTT 57.976 29.630 0.00 0.00 45.19 2.66
393 394 9.294030 GGATGCAAATCATAAGTTAAGACTTTG 57.706 33.333 0.00 13.11 45.19 2.77
394 395 9.294030 GATGCAAATCATAAGTTAAGACTTTGG 57.706 33.333 16.13 1.18 45.19 3.28
396 397 9.290988 TGCAAATCATAAGTTAAGACTTTGGTA 57.709 29.630 16.13 0.00 43.48 3.25
397 398 9.774742 GCAAATCATAAGTTAAGACTTTGGTAG 57.225 33.333 16.13 0.00 43.48 3.18
398 399 9.774742 CAAATCATAAGTTAAGACTTTGGTAGC 57.225 33.333 0.00 0.00 43.48 3.58
402 403 9.032624 TCATAAGTTAAGACTTTGGTAGCTAGT 57.967 33.333 0.00 0.00 43.48 2.57
403 404 9.303537 CATAAGTTAAGACTTTGGTAGCTAGTC 57.696 37.037 15.50 15.50 43.48 2.59
404 405 6.912951 AGTTAAGACTTTGGTAGCTAGTCA 57.087 37.500 21.50 4.76 40.53 3.41
405 406 7.299246 AGTTAAGACTTTGGTAGCTAGTCAA 57.701 36.000 21.50 10.03 40.53 3.18
406 407 7.379750 AGTTAAGACTTTGGTAGCTAGTCAAG 58.620 38.462 21.50 9.45 40.53 3.02
407 408 5.810080 AAGACTTTGGTAGCTAGTCAAGT 57.190 39.130 21.50 12.12 40.53 3.16
408 409 5.394224 AGACTTTGGTAGCTAGTCAAGTC 57.606 43.478 21.17 21.17 40.53 3.01
409 410 4.833380 AGACTTTGGTAGCTAGTCAAGTCA 59.167 41.667 26.09 9.13 40.53 3.41
410 411 5.304614 AGACTTTGGTAGCTAGTCAAGTCAA 59.695 40.000 26.09 9.84 40.53 3.18
411 412 5.542779 ACTTTGGTAGCTAGTCAAGTCAAG 58.457 41.667 0.00 0.00 0.00 3.02
413 414 4.785511 TGGTAGCTAGTCAAGTCAAGTC 57.214 45.455 0.00 0.00 0.00 3.01
414 415 4.149598 TGGTAGCTAGTCAAGTCAAGTCA 58.850 43.478 0.00 0.00 0.00 3.41
415 416 4.587262 TGGTAGCTAGTCAAGTCAAGTCAA 59.413 41.667 0.00 0.00 0.00 3.18
417 418 3.996480 AGCTAGTCAAGTCAAGTCAACC 58.004 45.455 0.00 0.00 0.00 3.77
418 419 3.388024 AGCTAGTCAAGTCAAGTCAACCA 59.612 43.478 0.00 0.00 0.00 3.67
419 420 4.127171 GCTAGTCAAGTCAAGTCAACCAA 58.873 43.478 0.00 0.00 0.00 3.67
420 421 4.574828 GCTAGTCAAGTCAAGTCAACCAAA 59.425 41.667 0.00 0.00 0.00 3.28
421 422 5.065988 GCTAGTCAAGTCAAGTCAACCAAAA 59.934 40.000 0.00 0.00 0.00 2.44
423 424 7.041372 GCTAGTCAAGTCAAGTCAACCAAAATA 60.041 37.037 0.00 0.00 0.00 1.40
424 425 7.639113 AGTCAAGTCAAGTCAACCAAAATAA 57.361 32.000 0.00 0.00 0.00 1.40
425 426 8.237811 AGTCAAGTCAAGTCAACCAAAATAAT 57.762 30.769 0.00 0.00 0.00 1.28
426 427 8.137437 AGTCAAGTCAAGTCAACCAAAATAATG 58.863 33.333 0.00 0.00 0.00 1.90
427 428 7.382218 GTCAAGTCAAGTCAACCAAAATAATGG 59.618 37.037 0.00 0.00 46.38 3.16
428 429 7.286546 TCAAGTCAAGTCAACCAAAATAATGGA 59.713 33.333 0.00 0.00 43.54 3.41
429 430 7.219484 AGTCAAGTCAACCAAAATAATGGAG 57.781 36.000 0.00 0.00 43.54 3.86
430 431 6.777580 AGTCAAGTCAACCAAAATAATGGAGT 59.222 34.615 0.00 0.00 43.54 3.85
432 433 8.021396 GTCAAGTCAACCAAAATAATGGAGTAC 58.979 37.037 0.00 0.00 43.54 2.73
434 435 9.226606 CAAGTCAACCAAAATAATGGAGTACTA 57.773 33.333 0.00 0.00 43.54 1.82
435 436 9.449719 AAGTCAACCAAAATAATGGAGTACTAG 57.550 33.333 0.00 0.00 43.54 2.57
436 437 8.603304 AGTCAACCAAAATAATGGAGTACTAGT 58.397 33.333 0.00 0.00 43.54 2.57
437 438 9.880157 GTCAACCAAAATAATGGAGTACTAGTA 57.120 33.333 0.00 0.00 43.54 1.82
442 443 7.985184 CCAAAATAATGGAGTACTAGTAGCACA 59.015 37.037 1.87 2.96 43.54 4.57
447 448 9.765795 ATAATGGAGTACTAGTAGCACAATTTC 57.234 33.333 1.87 0.00 0.00 2.17
448 449 6.599356 TGGAGTACTAGTAGCACAATTTCA 57.401 37.500 1.87 0.00 0.00 2.69
449 450 6.631016 TGGAGTACTAGTAGCACAATTTCAG 58.369 40.000 1.87 0.00 0.00 3.02
451 452 7.124298 TGGAGTACTAGTAGCACAATTTCAGAT 59.876 37.037 1.87 0.00 0.00 2.90
454 455 8.410141 AGTACTAGTAGCACAATTTCAGATCTC 58.590 37.037 1.87 0.00 0.00 2.75
457 458 2.983229 AGCACAATTTCAGATCTCGCT 58.017 42.857 0.00 0.00 0.00 4.93
458 459 2.935201 AGCACAATTTCAGATCTCGCTC 59.065 45.455 0.00 0.00 0.00 5.03
459 460 2.285486 GCACAATTTCAGATCTCGCTCG 60.285 50.000 0.00 0.00 0.00 5.03
462 463 2.132740 ATTTCAGATCTCGCTCGCTC 57.867 50.000 0.00 0.00 0.00 5.03
464 465 0.660488 TTCAGATCTCGCTCGCTCTC 59.340 55.000 0.00 0.00 0.00 3.20
466 467 0.235665 CAGATCTCGCTCGCTCTCTC 59.764 60.000 0.00 0.00 0.00 3.20
467 468 0.106708 AGATCTCGCTCGCTCTCTCT 59.893 55.000 0.00 0.00 0.00 3.10
468 469 0.512952 GATCTCGCTCGCTCTCTCTC 59.487 60.000 0.00 0.00 0.00 3.20
469 470 0.179059 ATCTCGCTCGCTCTCTCTCA 60.179 55.000 0.00 0.00 0.00 3.27
470 471 0.391793 TCTCGCTCGCTCTCTCTCAA 60.392 55.000 0.00 0.00 0.00 3.02
471 472 0.027979 CTCGCTCGCTCTCTCTCAAG 59.972 60.000 0.00 0.00 0.00 3.02
472 473 1.586042 CGCTCGCTCTCTCTCAAGC 60.586 63.158 0.00 0.00 35.13 4.01
473 474 1.809207 GCTCGCTCTCTCTCAAGCT 59.191 57.895 0.00 0.00 36.35 3.74
474 475 0.526096 GCTCGCTCTCTCTCAAGCTG 60.526 60.000 0.00 0.00 36.35 4.24
475 476 1.093972 CTCGCTCTCTCTCAAGCTGA 58.906 55.000 0.00 0.00 36.35 4.26
477 478 1.472082 TCGCTCTCTCTCAAGCTGAAG 59.528 52.381 0.00 0.00 36.35 3.02
478 479 1.643880 GCTCTCTCTCAAGCTGAAGC 58.356 55.000 0.00 0.00 42.49 3.86
494 495 2.754658 GCTGAAGCTGGCTGCCAT 60.755 61.111 23.64 7.53 44.23 4.40
495 496 2.772691 GCTGAAGCTGGCTGCCATC 61.773 63.158 23.64 18.79 44.23 3.51
496 497 1.077644 CTGAAGCTGGCTGCCATCT 60.078 57.895 23.64 21.03 44.23 2.90
497 498 1.077930 TGAAGCTGGCTGCCATCTC 60.078 57.895 23.85 18.59 44.23 2.75
499 500 3.355957 AAGCTGGCTGCCATCTCCC 62.356 63.158 23.85 9.80 44.23 4.30
501 502 4.559063 CTGGCTGCCATCTCCCCG 62.559 72.222 23.64 4.46 30.82 5.73
540 541 4.093291 CGCCCTGCTGCTCTTCCT 62.093 66.667 0.00 0.00 0.00 3.36
541 542 2.124778 GCCCTGCTGCTCTTCCTC 60.125 66.667 0.00 0.00 0.00 3.71
542 543 2.668120 GCCCTGCTGCTCTTCCTCT 61.668 63.158 0.00 0.00 0.00 3.69
543 544 1.521616 CCCTGCTGCTCTTCCTCTC 59.478 63.158 0.00 0.00 0.00 3.20
545 546 1.141449 CTGCTGCTCTTCCTCTCCG 59.859 63.158 0.00 0.00 0.00 4.63
547 548 2.498726 CTGCTCTTCCTCTCCGCC 59.501 66.667 0.00 0.00 0.00 6.13
548 549 2.038007 TGCTCTTCCTCTCCGCCT 59.962 61.111 0.00 0.00 0.00 5.52
549 550 2.015227 CTGCTCTTCCTCTCCGCCTC 62.015 65.000 0.00 0.00 0.00 4.70
550 551 3.115556 CTCTTCCTCTCCGCCTCG 58.884 66.667 0.00 0.00 0.00 4.63
551 552 3.132481 CTCTTCCTCTCCGCCTCGC 62.132 68.421 0.00 0.00 0.00 5.03
552 553 4.214327 CTTCCTCTCCGCCTCGCC 62.214 72.222 0.00 0.00 0.00 5.54
574 575 4.778143 GCGCTCCACAACCCGGAT 62.778 66.667 0.73 0.00 0.00 4.18
575 576 2.511600 CGCTCCACAACCCGGATC 60.512 66.667 0.73 0.00 0.00 3.36
576 577 2.990479 GCTCCACAACCCGGATCT 59.010 61.111 0.73 0.00 0.00 2.75
577 578 1.450312 GCTCCACAACCCGGATCTG 60.450 63.158 0.73 0.00 0.00 2.90
578 579 1.221840 CTCCACAACCCGGATCTGG 59.778 63.158 14.26 14.26 0.00 3.86
579 580 1.229368 TCCACAACCCGGATCTGGA 60.229 57.895 23.02 7.85 0.00 3.86
580 581 1.078426 CCACAACCCGGATCTGGAC 60.078 63.158 23.02 0.00 0.00 4.02
581 582 1.078426 CACAACCCGGATCTGGACC 60.078 63.158 23.02 0.00 0.00 4.46
582 583 1.537889 ACAACCCGGATCTGGACCA 60.538 57.895 23.02 0.00 0.00 4.02
583 584 1.221840 CAACCCGGATCTGGACCAG 59.778 63.158 23.02 15.99 0.00 4.00
585 586 3.866582 CCCGGATCTGGACCAGCC 61.867 72.222 23.02 12.05 37.10 4.85
586 587 4.227134 CCGGATCTGGACCAGCCG 62.227 72.222 25.58 25.58 40.66 5.52
587 588 4.899239 CGGATCTGGACCAGCCGC 62.899 72.222 22.58 12.05 40.66 6.53
588 589 3.785859 GGATCTGGACCAGCCGCA 61.786 66.667 17.33 0.00 40.66 5.69
589 590 2.512515 GATCTGGACCAGCCGCAC 60.513 66.667 17.33 2.48 40.66 5.34
590 591 4.101448 ATCTGGACCAGCCGCACC 62.101 66.667 17.33 0.00 40.66 5.01
621 4965 2.745100 CCGACAGCAGCAGCACAT 60.745 61.111 3.17 0.00 45.49 3.21
655 4999 1.380524 CAGATCCTTGCTTGCTCAGG 58.619 55.000 5.42 5.42 0.00 3.86
658 5002 0.034670 ATCCTTGCTTGCTCAGGGAC 60.035 55.000 7.07 0.00 43.65 4.46
659 5003 2.037136 CCTTGCTTGCTCAGGGACG 61.037 63.158 4.22 0.00 35.44 4.79
660 5004 1.004560 CTTGCTTGCTCAGGGACGA 60.005 57.895 0.00 0.00 0.00 4.20
661 5005 1.004560 TTGCTTGCTCAGGGACGAG 60.005 57.895 0.00 0.00 36.02 4.18
662 5006 1.758440 TTGCTTGCTCAGGGACGAGT 61.758 55.000 0.00 0.00 35.33 4.18
663 5007 1.739562 GCTTGCTCAGGGACGAGTG 60.740 63.158 0.00 0.00 35.33 3.51
685 5029 1.746991 CTGCCCTCCTTCTTTCGCC 60.747 63.158 0.00 0.00 0.00 5.54
686 5030 2.190488 CTGCCCTCCTTCTTTCGCCT 62.190 60.000 0.00 0.00 0.00 5.52
703 5047 1.077068 CTCCTCCTCCTCTCGCACT 60.077 63.158 0.00 0.00 0.00 4.40
704 5048 1.379176 TCCTCCTCCTCTCGCACTG 60.379 63.158 0.00 0.00 0.00 3.66
705 5049 1.680651 CCTCCTCCTCTCGCACTGT 60.681 63.158 0.00 0.00 0.00 3.55
706 5050 1.662438 CCTCCTCCTCTCGCACTGTC 61.662 65.000 0.00 0.00 0.00 3.51
707 5051 1.987704 CTCCTCCTCTCGCACTGTCG 61.988 65.000 0.00 0.00 0.00 4.35
708 5052 2.202544 CTCCTCTCGCACTGTCGC 60.203 66.667 0.00 0.00 0.00 5.19
709 5053 2.982744 CTCCTCTCGCACTGTCGCA 61.983 63.158 3.79 0.00 0.00 5.10
710 5054 2.807045 CCTCTCGCACTGTCGCAC 60.807 66.667 3.79 0.00 0.00 5.34
711 5055 2.050077 CTCTCGCACTGTCGCACA 60.050 61.111 3.79 0.00 0.00 4.57
740 5084 3.781770 GACATGCCGCCTCCTCTCG 62.782 68.421 0.00 0.00 0.00 4.04
869 5235 4.106925 GAGGTGGCCCCTGCTCTG 62.107 72.222 16.66 0.00 46.51 3.35
907 5273 0.820871 AGCTTCAGTCAGATCCCGTC 59.179 55.000 0.00 0.00 0.00 4.79
962 5328 2.099098 CCCACAACCTTCAACAAGTGTC 59.901 50.000 0.00 0.00 0.00 3.67
972 5338 1.073763 CAACAAGTGTCCCCCATCTGA 59.926 52.381 0.00 0.00 0.00 3.27
985 5352 1.380524 CATCTGAAAGGCAGGAGCAG 58.619 55.000 0.00 0.00 44.98 4.24
994 5361 3.767806 CAGGAGCAGGAGCAGCGA 61.768 66.667 0.00 0.00 45.49 4.93
1348 5970 0.968405 TGTTTGGCTTGATCTTGGCC 59.032 50.000 14.25 14.25 45.45 5.36
1359 5996 3.972133 TGATCTTGGCCAACATCTTCAT 58.028 40.909 27.55 7.88 0.00 2.57
1368 6005 4.479619 GCCAACATCTTCATCAACACTTC 58.520 43.478 0.00 0.00 0.00 3.01
1545 6283 5.954752 TCTCCACAATAATAATTTGGGCACA 59.045 36.000 0.00 0.00 30.48 4.57
1546 6284 6.096705 TCTCCACAATAATAATTTGGGCACAG 59.903 38.462 0.00 0.00 30.48 3.66
1549 6287 6.351711 CCACAATAATAATTTGGGCACAGGAA 60.352 38.462 0.00 0.00 0.00 3.36
1709 6453 9.032420 GTTACAATCGGAGGTTCTTAGAAATAG 57.968 37.037 0.00 0.00 0.00 1.73
2392 7138 3.565307 ACATGTGGGAAGACAACATGTT 58.435 40.909 13.26 4.92 46.04 2.71
2717 7463 9.607333 TGGGAATCAGTGAGAGATAGTAATATT 57.393 33.333 0.00 0.00 0.00 1.28
2843 7590 6.258507 CCTATTGTGCAATATTTCCAAAAGGC 59.741 38.462 5.25 0.00 33.29 4.35
2984 7731 6.878923 TCAAGTCATCATCGGTGAGTTTATTT 59.121 34.615 3.97 0.00 37.19 1.40
3118 7884 4.183865 TGCTGAGAATGATTTGGAGTACG 58.816 43.478 0.00 0.00 0.00 3.67
3132 7898 7.915293 TTTGGAGTACGTCACATAATCATTT 57.085 32.000 0.00 0.00 0.00 2.32
3161 7929 5.754890 CAGTGCAGCTTTTCCAAATAACTTT 59.245 36.000 0.00 0.00 0.00 2.66
3166 7934 7.011295 TGCAGCTTTTCCAAATAACTTTTTGAG 59.989 33.333 0.00 0.00 38.58 3.02
3224 8024 6.183360 CCCAACACATCCCTACAATATTCAAC 60.183 42.308 0.00 0.00 0.00 3.18
3319 8122 3.625764 AGTTGAACTAAAGCAGCGACAAA 59.374 39.130 0.00 0.00 0.00 2.83
3480 8299 3.190874 GGCTTACTGTGACTAGCATGAC 58.809 50.000 0.00 0.00 35.36 3.06
3496 8315 2.433868 TGACTACTTGGTGCGAGAAC 57.566 50.000 0.00 0.00 0.00 3.01
3581 8526 9.425577 TCGTGAAATGTACAACAATATAGTTCA 57.574 29.630 0.00 0.00 30.85 3.18
3632 11658 2.498644 TAAAACACCCATCCGATGCA 57.501 45.000 2.53 0.00 0.00 3.96
3681 11707 3.565307 CCCTGGTATACATGCAAACCAT 58.435 45.455 12.52 0.00 41.04 3.55
3739 11767 1.201343 GCTATAGCGCCGCTAATAGC 58.799 55.000 27.92 27.92 44.62 2.97
3740 11768 1.469251 GCTATAGCGCCGCTAATAGCA 60.469 52.381 32.01 14.85 44.62 3.49
3741 11769 2.876091 CTATAGCGCCGCTAATAGCAA 58.124 47.619 23.98 0.00 44.62 3.91
3742 11770 1.714794 ATAGCGCCGCTAATAGCAAG 58.285 50.000 23.98 4.07 44.62 4.01
3743 11771 0.944311 TAGCGCCGCTAATAGCAAGC 60.944 55.000 17.75 12.85 42.58 4.01
3744 11772 2.247437 GCGCCGCTAATAGCAAGCT 61.247 57.895 18.19 0.00 42.58 3.74
3745 11773 0.944311 GCGCCGCTAATAGCAAGCTA 60.944 55.000 18.19 4.00 42.58 3.32
3746 11774 1.714794 CGCCGCTAATAGCAAGCTAT 58.285 50.000 18.19 8.71 42.58 2.97
3747 11775 2.876091 CGCCGCTAATAGCAAGCTATA 58.124 47.619 14.42 3.75 42.58 1.31
3748 11776 2.854777 CGCCGCTAATAGCAAGCTATAG 59.145 50.000 14.42 12.41 42.58 1.31
3749 11777 2.605366 GCCGCTAATAGCAAGCTATAGC 59.395 50.000 17.33 17.33 42.58 2.97
3750 11778 2.854777 CCGCTAATAGCAAGCTATAGCG 59.145 50.000 31.36 31.36 45.32 4.26
3751 11779 2.280183 CGCTAATAGCAAGCTATAGCGC 59.720 50.000 29.70 22.93 43.21 5.92
3752 11780 2.605366 GCTAATAGCAAGCTATAGCGCC 59.395 50.000 18.82 10.99 43.24 6.53
3753 11781 4.815509 GCTAATAGCAAGCTATAGCGCCG 61.816 52.174 18.82 12.09 43.24 6.46
3756 11784 1.372997 GCAAGCTATAGCGCCGCTA 60.373 57.895 22.40 22.40 45.55 4.26
3757 11785 0.944311 GCAAGCTATAGCGCCGCTAA 60.944 55.000 23.98 11.35 44.62 3.09
3758 11786 1.714794 CAAGCTATAGCGCCGCTAAT 58.285 50.000 23.98 13.68 44.62 1.73
3759 11787 2.876091 CAAGCTATAGCGCCGCTAATA 58.124 47.619 23.98 14.06 44.62 0.98
3760 11788 2.853731 AGCTATAGCGCCGCTAATAG 57.146 50.000 23.98 22.12 44.62 1.73
3761 11789 1.201343 GCTATAGCGCCGCTAATAGC 58.799 55.000 27.92 27.92 44.62 2.97
3762 11790 1.469251 GCTATAGCGCCGCTAATAGCA 60.469 52.381 32.01 14.85 44.62 3.49
3763 11791 2.876091 CTATAGCGCCGCTAATAGCAA 58.124 47.619 23.98 0.00 44.62 3.91
3764 11792 1.714794 ATAGCGCCGCTAATAGCAAG 58.285 50.000 23.98 4.07 44.62 4.01
3765 11793 0.944311 TAGCGCCGCTAATAGCAAGC 60.944 55.000 17.75 12.85 42.58 4.01
3766 11794 2.247437 GCGCCGCTAATAGCAAGCT 61.247 57.895 18.19 0.00 42.58 3.74
3767 11795 0.944311 GCGCCGCTAATAGCAAGCTA 60.944 55.000 18.19 4.00 42.58 3.32
3768 11796 1.714794 CGCCGCTAATAGCAAGCTAT 58.285 50.000 18.19 8.71 42.58 2.97
3769 11797 2.876091 CGCCGCTAATAGCAAGCTATA 58.124 47.619 14.42 3.75 42.58 1.31
3770 11798 2.854777 CGCCGCTAATAGCAAGCTATAG 59.145 50.000 14.42 12.41 42.58 1.31
3771 11799 2.605366 GCCGCTAATAGCAAGCTATAGC 59.395 50.000 17.33 17.33 42.58 2.97
3772 11800 2.854777 CCGCTAATAGCAAGCTATAGCG 59.145 50.000 31.36 31.36 45.32 4.26
3773 11801 2.280183 CGCTAATAGCAAGCTATAGCGC 59.720 50.000 29.70 22.93 43.21 5.92
3774 11802 2.605366 GCTAATAGCAAGCTATAGCGCC 59.395 50.000 18.82 10.99 43.24 6.53
3775 11803 4.815509 GCTAATAGCAAGCTATAGCGCCG 61.816 52.174 18.82 12.09 43.24 6.46
3778 11806 1.372997 GCAAGCTATAGCGCCGCTA 60.373 57.895 22.40 22.40 45.55 4.26
3779 11807 0.944311 GCAAGCTATAGCGCCGCTAA 60.944 55.000 23.98 11.35 44.62 3.09
3780 11808 1.714794 CAAGCTATAGCGCCGCTAAT 58.285 50.000 23.98 13.68 44.62 1.73
3781 11809 2.876091 CAAGCTATAGCGCCGCTAATA 58.124 47.619 23.98 14.06 44.62 0.98
3782 11810 2.853731 AGCTATAGCGCCGCTAATAG 57.146 50.000 23.98 22.12 44.62 1.73
3783 11811 1.201343 GCTATAGCGCCGCTAATAGC 58.799 55.000 27.92 27.92 44.62 2.97
3784 11812 1.469251 GCTATAGCGCCGCTAATAGCA 60.469 52.381 32.01 14.85 44.62 3.49
3785 11813 2.876091 CTATAGCGCCGCTAATAGCAA 58.124 47.619 23.98 0.00 44.62 3.91
3786 11814 1.714794 ATAGCGCCGCTAATAGCAAG 58.285 50.000 23.98 4.07 44.62 4.01
3787 11815 0.944311 TAGCGCCGCTAATAGCAAGC 60.944 55.000 17.75 12.85 42.58 4.01
3788 11816 2.247437 GCGCCGCTAATAGCAAGCT 61.247 57.895 18.19 0.00 42.58 3.74
3789 11817 0.944311 GCGCCGCTAATAGCAAGCTA 60.944 55.000 18.19 4.00 42.58 3.32
3790 11818 1.714794 CGCCGCTAATAGCAAGCTAT 58.285 50.000 18.19 8.71 42.58 2.97
3791 11819 2.876091 CGCCGCTAATAGCAAGCTATA 58.124 47.619 14.42 3.75 42.58 1.31
3792 11820 2.854777 CGCCGCTAATAGCAAGCTATAG 59.145 50.000 14.42 12.41 42.58 1.31
3793 11821 2.605366 GCCGCTAATAGCAAGCTATAGC 59.395 50.000 17.33 17.33 42.58 2.97
3794 11822 2.854777 CCGCTAATAGCAAGCTATAGCG 59.145 50.000 31.36 31.36 45.32 4.26
3795 11823 2.280183 CGCTAATAGCAAGCTATAGCGC 59.720 50.000 29.70 22.93 43.21 5.92
3807 11835 2.876091 CTATAGCGCCGCTAATAGCAA 58.124 47.619 23.98 0.00 44.62 3.91
3854 11919 3.978855 CGCTAATAGCACGTTATAGCACA 59.021 43.478 13.15 0.00 42.58 4.57
3876 11941 6.315393 CACACTAATAGCGTATTTCAAAGGGT 59.685 38.462 0.00 0.00 0.00 4.34
3963 12289 6.099269 ACTCCCTCCGCAACTTAATATAAGAA 59.901 38.462 4.24 0.00 0.00 2.52
3994 12322 5.918011 ACATTGTTATAGTGCCAAAAACGTG 59.082 36.000 0.00 0.00 0.00 4.49
4147 12477 1.749638 AGTACTCGCGGGACAGAGG 60.750 63.158 15.95 0.00 37.13 3.69
4217 12609 2.037772 GCATCAGACGGTCAATCCCTAT 59.962 50.000 11.27 0.00 0.00 2.57
4418 12895 2.574369 TCCCGTCTTTAATGGACCATGT 59.426 45.455 8.02 1.16 35.91 3.21
4518 12996 2.093288 TGAAAAATTGTGGTTGCTGCCA 60.093 40.909 0.00 0.00 35.93 4.92
4527 13005 1.220749 GTTGCTGCCACGGGATCTA 59.779 57.895 0.00 0.00 0.00 1.98
4543 13319 0.533531 TCTAATGATGCAGGCTGCCG 60.534 55.000 34.58 14.69 44.23 5.69
4544 13320 2.126417 CTAATGATGCAGGCTGCCGC 62.126 60.000 34.58 25.76 44.23 6.53
4600 14563 1.002274 AGGCCAGCTACTACCTGCT 59.998 57.895 5.01 0.00 40.54 4.24
4696 14670 1.300971 GATGAAGCAAGGCACTGCGA 61.301 55.000 6.01 0.00 40.86 5.10
4713 14687 4.825085 ACTGCGAGGTTTTCATTTTCCTAA 59.175 37.500 0.00 0.00 0.00 2.69
4815 14794 9.822727 ATTATTTTCCTTCCTTAGTTTCCTTGA 57.177 29.630 0.00 0.00 0.00 3.02
4816 14795 9.649316 TTATTTTCCTTCCTTAGTTTCCTTGAA 57.351 29.630 0.00 0.00 0.00 2.69
4817 14796 8.727100 ATTTTCCTTCCTTAGTTTCCTTGAAT 57.273 30.769 0.00 0.00 0.00 2.57
4818 14797 8.547481 TTTTCCTTCCTTAGTTTCCTTGAATT 57.453 30.769 0.00 0.00 0.00 2.17
4819 14798 7.761038 TTCCTTCCTTAGTTTCCTTGAATTC 57.239 36.000 0.00 0.00 0.00 2.17
4820 14799 6.848069 TCCTTCCTTAGTTTCCTTGAATTCA 58.152 36.000 3.38 3.38 0.00 2.57
4821 14800 6.715264 TCCTTCCTTAGTTTCCTTGAATTCAC 59.285 38.462 7.89 0.00 0.00 3.18
4822 14801 6.490040 CCTTCCTTAGTTTCCTTGAATTCACA 59.510 38.462 7.89 0.00 0.00 3.58
4890 14904 2.629763 GCGCAAAAGAACCGTCGT 59.370 55.556 0.30 0.00 0.00 4.34
5060 16477 5.705609 AAAGGAGTTGACGCATAAAATGT 57.294 34.783 0.00 0.00 0.00 2.71
5061 16478 5.705609 AAGGAGTTGACGCATAAAATGTT 57.294 34.783 0.00 0.00 0.00 2.71
5062 16479 5.705609 AGGAGTTGACGCATAAAATGTTT 57.294 34.783 0.00 0.00 0.00 2.83
5277 16696 0.610232 AATGCTGAAGGAAGCCGCTT 60.610 50.000 4.98 4.98 42.83 4.68
5460 16879 8.935844 CATATATACGTTGGCAGATTGTATTGT 58.064 33.333 0.00 2.89 0.00 2.71
5496 16915 8.355169 GCAATTGAGATATCTTAATGCTCCAAA 58.645 33.333 20.08 0.00 33.25 3.28
5644 17063 5.913137 ACCTTGATTTGTCAAGTTGTTCA 57.087 34.783 14.85 1.37 43.99 3.18
5651 17070 6.979817 TGATTTGTCAAGTTGTTCAGGAATTG 59.020 34.615 2.11 0.00 0.00 2.32
5824 17243 2.034221 GAAGTTCTGGGCGGCCTT 59.966 61.111 29.87 14.70 0.00 4.35
6015 17434 1.739067 AACTTATCAGGTTGGCGAGC 58.261 50.000 0.00 0.00 0.00 5.03
6180 17599 0.179062 AGTTCGCTGCCAGATGATCC 60.179 55.000 0.00 0.00 0.00 3.36
6234 17668 1.418334 AGGAGGTCCTTGGATGATCG 58.582 55.000 0.00 0.00 46.09 3.69
6238 17672 1.765314 AGGTCCTTGGATGATCGGAAG 59.235 52.381 0.00 0.00 0.00 3.46
6252 17686 3.616956 TCGGAAGAAAGATGCATCAGT 57.383 42.857 27.81 15.15 37.03 3.41
6330 17770 5.678583 TCTTTCAGATCTAGAGCATTTGGG 58.321 41.667 11.20 0.00 0.00 4.12
6338 17778 1.831580 AGAGCATTTGGGCTTGTCTC 58.168 50.000 0.00 0.00 45.99 3.36
6349 17789 2.160417 GGGCTTGTCTCGAAATTGTCTG 59.840 50.000 0.00 0.00 0.00 3.51
6352 17792 4.201763 GGCTTGTCTCGAAATTGTCTGATC 60.202 45.833 0.00 0.00 0.00 2.92
6417 17857 1.617018 TTGGACCTCTCGGGATGCAG 61.617 60.000 0.00 0.00 38.76 4.41
6611 18055 4.263727 TGCTAAAGCCCACAGATCCTTTTA 60.264 41.667 0.00 0.00 41.18 1.52
6642 18086 8.734386 GGAGATAACTGAACTTGAAAATGTGAT 58.266 33.333 0.00 0.00 0.00 3.06
6663 18107 4.427394 CGCAGGAGAGGCACATAC 57.573 61.111 0.00 0.00 0.00 2.39
6755 18199 3.635836 TGTGGATGACAAAATGTTGCTGA 59.364 39.130 0.00 0.00 38.39 4.26
6937 18381 5.006746 CGGTGAGGAGAATATGTTAACAAGC 59.993 44.000 13.23 0.72 0.00 4.01
6952 18396 1.133025 ACAAGCGTGCAAATAGATGGC 59.867 47.619 0.00 0.00 0.00 4.40
6966 18410 3.098231 TGGCTGCCCCATGATGAA 58.902 55.556 17.53 0.00 39.18 2.57
7041 18485 8.165397 TGATAATGTGTTATCATCATGGGATGT 58.835 33.333 10.03 0.00 46.92 3.06
7184 18634 7.836685 TCCCTTATTTGTCTATTGCCAATTGTA 59.163 33.333 4.43 0.00 0.00 2.41
7440 18890 0.618458 TGGCTAGGCGAATTGACCTT 59.382 50.000 12.19 0.00 37.50 3.50
7614 19065 3.181466 GCTGACAACCAACAAAGGGAATT 60.181 43.478 0.00 0.00 0.00 2.17
7771 19231 1.396301 GAGAACAAGATGAAGCTGGCG 59.604 52.381 0.00 0.00 0.00 5.69
7792 19252 4.260784 GCGCACATAGAAAAGAAGGTATGG 60.261 45.833 0.30 0.00 0.00 2.74
8230 24276 0.606604 TACTTGAAGGAGGACCACGC 59.393 55.000 0.00 0.00 38.94 5.34
8231 24277 1.371183 CTTGAAGGAGGACCACGCA 59.629 57.895 0.00 0.00 38.94 5.24
8232 24278 0.671781 CTTGAAGGAGGACCACGCAG 60.672 60.000 0.00 0.00 38.94 5.18
8234 24280 2.203788 AAGGAGGACCACGCAGGA 60.204 61.111 0.93 0.00 41.22 3.86
8235 24281 2.232298 GAAGGAGGACCACGCAGGAG 62.232 65.000 0.93 0.00 41.22 3.69
8236 24282 4.459089 GGAGGACCACGCAGGAGC 62.459 72.222 0.93 0.00 41.22 4.70
8237 24283 3.386237 GAGGACCACGCAGGAGCT 61.386 66.667 0.93 0.00 41.22 4.09
8246 24292 0.466124 ACGCAGGAGCTAAGGGAATC 59.534 55.000 0.00 0.00 39.10 2.52
8279 24325 2.293122 CGATGGGAAACTTGTTTGCAGA 59.707 45.455 17.00 5.84 0.00 4.26
8356 25074 5.258456 TGTTCTACAGAGTGTCGAACTTT 57.742 39.130 19.29 0.00 46.68 2.66
8366 25092 4.969816 AGTGTCGAACTTTGTTCTTTGTG 58.030 39.130 8.51 0.00 34.57 3.33
8391 25117 6.861055 GCTTTGTGCTTAGTTTGCATAGTTTA 59.139 34.615 0.00 0.00 42.69 2.01
8407 25133 6.709643 CATAGTTTAGTTTCCTGCTTCGATG 58.290 40.000 0.00 0.00 0.00 3.84
8412 25138 1.129437 GTTTCCTGCTTCGATGACTGC 59.871 52.381 1.89 0.00 0.00 4.40
8425 25151 5.534407 TCGATGACTGCACTAGTTTTGTAA 58.466 37.500 0.00 0.00 40.53 2.41
8429 25192 8.058328 CGATGACTGCACTAGTTTTGTAATATG 58.942 37.037 0.00 0.00 40.53 1.78
8431 25194 8.028540 TGACTGCACTAGTTTTGTAATATGTG 57.971 34.615 0.00 0.00 40.53 3.21
8433 25196 9.146984 GACTGCACTAGTTTTGTAATATGTGTA 57.853 33.333 0.00 0.00 40.53 2.90
8471 25249 9.612066 TGATGATTGTAGAACTTGTATGCATTA 57.388 29.630 3.54 0.00 0.00 1.90
8491 25269 0.179108 GGTCCTGGTGAGCGTGATAC 60.179 60.000 0.00 0.00 0.00 2.24
8534 25317 4.762251 AGAATGCCTAAACACTTGAAGTCC 59.238 41.667 0.00 0.00 0.00 3.85
8560 25347 3.743396 GCTAGTTTGTCTTGTCTGTCAGG 59.257 47.826 0.00 0.00 0.00 3.86
8596 25385 6.058553 TGGTACTGTTGCTACTCTAGTCTA 57.941 41.667 0.00 0.00 0.00 2.59
8651 25443 5.313520 TGAAACATATGACAGTGGCAATG 57.686 39.130 14.15 14.15 0.00 2.82
8653 25445 1.672363 ACATATGACAGTGGCAATGCG 59.328 47.619 15.76 0.00 0.00 4.73
8669 25462 1.288127 GCGTCGTCTTACCCAGTGT 59.712 57.895 0.00 0.00 0.00 3.55
8738 25531 4.541213 GGTGACCTCTGTCTCCCA 57.459 61.111 0.00 0.00 45.38 4.37
8741 25534 1.153061 TGACCTCTGTCTCCCACGT 59.847 57.895 0.00 0.00 42.28 4.49
8751 25544 1.753078 CTCCCACGTCATCTCCGGA 60.753 63.158 2.93 2.93 0.00 5.14
8752 25545 1.729470 CTCCCACGTCATCTCCGGAG 61.729 65.000 26.32 26.32 0.00 4.63
8766 25559 3.319198 GGAGGACGGAGGTTGCCA 61.319 66.667 0.00 0.00 0.00 4.92
8767 25560 2.047179 GAGGACGGAGGTTGCCAC 60.047 66.667 0.00 0.00 0.00 5.01
8768 25561 2.847234 AGGACGGAGGTTGCCACA 60.847 61.111 0.00 0.00 0.00 4.17
8770 25563 3.041940 GACGGAGGTTGCCACACG 61.042 66.667 0.00 0.00 0.00 4.49
8774 25567 4.980805 GAGGTTGCCACACGCCGA 62.981 66.667 0.00 0.00 36.24 5.54
8780 25573 4.760047 GCCACACGCCGACCTGAT 62.760 66.667 0.00 0.00 0.00 2.90
8781 25574 2.509336 CCACACGCCGACCTGATC 60.509 66.667 0.00 0.00 0.00 2.92
8782 25575 2.509336 CACACGCCGACCTGATCC 60.509 66.667 0.00 0.00 0.00 3.36
8783 25576 2.680352 ACACGCCGACCTGATCCT 60.680 61.111 0.00 0.00 0.00 3.24
8784 25577 2.105128 CACGCCGACCTGATCCTC 59.895 66.667 0.00 0.00 0.00 3.71
8785 25578 2.043852 ACGCCGACCTGATCCTCT 60.044 61.111 0.00 0.00 0.00 3.69
8786 25579 2.415010 CGCCGACCTGATCCTCTG 59.585 66.667 0.00 0.00 0.00 3.35
8787 25580 2.107953 GCCGACCTGATCCTCTGC 59.892 66.667 0.00 0.00 0.00 4.26
8788 25581 2.430610 GCCGACCTGATCCTCTGCT 61.431 63.158 0.00 0.00 0.00 4.24
8789 25582 1.739049 CCGACCTGATCCTCTGCTC 59.261 63.158 0.00 0.00 0.00 4.26
8790 25583 1.358402 CGACCTGATCCTCTGCTCG 59.642 63.158 0.00 0.00 0.00 5.03
8791 25584 1.098129 CGACCTGATCCTCTGCTCGA 61.098 60.000 0.00 0.00 28.82 4.04
8902 25705 2.125766 GAAGTCAAGGGCGGGGAAGT 62.126 60.000 0.00 0.00 0.00 3.01
8916 25719 1.821216 GGAAGTTTGATTCCAGCCGA 58.179 50.000 0.64 0.00 46.77 5.54
8922 25725 2.166130 TTGATTCCAGCCGACTCGCA 62.166 55.000 0.00 0.00 0.00 5.10
9007 25887 3.491652 GGCCAGCGCGAACTCTTC 61.492 66.667 12.10 0.00 35.02 2.87
9008 25888 3.491652 GCCAGCGCGAACTCTTCC 61.492 66.667 12.10 0.00 0.00 3.46
9019 25899 6.929606 AGCGCGAACTCTTCCTTTTTATATAT 59.070 34.615 12.10 0.00 0.00 0.86
9041 25921 8.974292 ATATACTAGAGCAAAATCCCCTAGAA 57.026 34.615 0.00 0.00 33.13 2.10
9042 25922 7.691993 ATACTAGAGCAAAATCCCCTAGAAA 57.308 36.000 0.00 0.00 33.13 2.52
9043 25923 6.388619 ACTAGAGCAAAATCCCCTAGAAAA 57.611 37.500 0.00 0.00 33.13 2.29
9044 25924 6.790319 ACTAGAGCAAAATCCCCTAGAAAAA 58.210 36.000 0.00 0.00 33.13 1.94
9045 25925 7.414266 ACTAGAGCAAAATCCCCTAGAAAAAT 58.586 34.615 0.00 0.00 33.13 1.82
9046 25926 8.557450 ACTAGAGCAAAATCCCCTAGAAAAATA 58.443 33.333 0.00 0.00 33.13 1.40
9047 25927 7.888250 AGAGCAAAATCCCCTAGAAAAATAG 57.112 36.000 0.00 0.00 0.00 1.73
9048 25928 7.643123 AGAGCAAAATCCCCTAGAAAAATAGA 58.357 34.615 0.00 0.00 0.00 1.98
9083 25963 9.818796 GCATACTACTCTTGAAAGAAGAAAAAG 57.181 33.333 0.00 0.00 34.03 2.27
9091 25971 8.388484 TCTTGAAAGAAGAAAAAGAGAGATGG 57.612 34.615 0.00 0.00 30.73 3.51
9120 26000 3.550639 CCAATCATGCTCGTGTGTGTTTT 60.551 43.478 0.00 0.00 0.00 2.43
9121 26001 3.988379 ATCATGCTCGTGTGTGTTTTT 57.012 38.095 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 9.442047 CCATACTTCAGACTTTTTAACTCTGAT 57.558 33.333 0.00 0.00 40.05 2.90
21 22 7.878127 TCCCATACTTCAGACTTTTTAACTCTG 59.122 37.037 0.00 0.00 33.94 3.35
22 23 7.974504 TCCCATACTTCAGACTTTTTAACTCT 58.025 34.615 0.00 0.00 0.00 3.24
25 26 9.459640 GTTTTCCCATACTTCAGACTTTTTAAC 57.540 33.333 0.00 0.00 0.00 2.01
26 27 9.191479 TGTTTTCCCATACTTCAGACTTTTTAA 57.809 29.630 0.00 0.00 0.00 1.52
27 28 8.754991 TGTTTTCCCATACTTCAGACTTTTTA 57.245 30.769 0.00 0.00 0.00 1.52
32 33 5.501156 GGATGTTTTCCCATACTTCAGACT 58.499 41.667 0.00 0.00 38.75 3.24
33 34 5.819825 GGATGTTTTCCCATACTTCAGAC 57.180 43.478 0.00 0.00 38.75 3.51
45 46 7.176690 TGAAGAATAAAGTCAGGGATGTTTTCC 59.823 37.037 0.00 0.00 44.62 3.13
46 47 8.110860 TGAAGAATAAAGTCAGGGATGTTTTC 57.889 34.615 0.00 0.00 0.00 2.29
49 50 7.637511 AGATGAAGAATAAAGTCAGGGATGTT 58.362 34.615 0.00 0.00 0.00 2.71
51 52 6.709846 GGAGATGAAGAATAAAGTCAGGGATG 59.290 42.308 0.00 0.00 0.00 3.51
53 54 5.966935 AGGAGATGAAGAATAAAGTCAGGGA 59.033 40.000 0.00 0.00 0.00 4.20
54 55 6.245890 AGGAGATGAAGAATAAAGTCAGGG 57.754 41.667 0.00 0.00 0.00 4.45
55 56 7.108847 ACAAGGAGATGAAGAATAAAGTCAGG 58.891 38.462 0.00 0.00 0.00 3.86
56 57 9.658799 TTACAAGGAGATGAAGAATAAAGTCAG 57.341 33.333 0.00 0.00 0.00 3.51
60 61 9.151471 TCGTTTACAAGGAGATGAAGAATAAAG 57.849 33.333 0.00 0.00 0.00 1.85
61 62 9.667107 ATCGTTTACAAGGAGATGAAGAATAAA 57.333 29.630 0.00 0.00 0.00 1.40
62 63 9.667107 AATCGTTTACAAGGAGATGAAGAATAA 57.333 29.630 0.00 0.00 0.00 1.40
63 64 9.667107 AAATCGTTTACAAGGAGATGAAGAATA 57.333 29.630 0.00 0.00 0.00 1.75
64 65 8.454106 CAAATCGTTTACAAGGAGATGAAGAAT 58.546 33.333 0.00 0.00 0.00 2.40
65 66 7.094805 CCAAATCGTTTACAAGGAGATGAAGAA 60.095 37.037 0.00 0.00 0.00 2.52
66 67 6.371548 CCAAATCGTTTACAAGGAGATGAAGA 59.628 38.462 0.00 0.00 0.00 2.87
67 68 6.546395 CCAAATCGTTTACAAGGAGATGAAG 58.454 40.000 0.00 0.00 0.00 3.02
68 69 5.106317 GCCAAATCGTTTACAAGGAGATGAA 60.106 40.000 0.00 0.00 0.00 2.57
70 71 4.396166 AGCCAAATCGTTTACAAGGAGATG 59.604 41.667 0.00 0.00 0.00 2.90
71 72 4.589908 AGCCAAATCGTTTACAAGGAGAT 58.410 39.130 0.00 0.00 0.00 2.75
73 74 5.584649 TGATAGCCAAATCGTTTACAAGGAG 59.415 40.000 0.00 0.00 0.00 3.69
75 76 5.811399 TGATAGCCAAATCGTTTACAAGG 57.189 39.130 0.00 0.00 0.00 3.61
76 77 7.967854 TCAAATGATAGCCAAATCGTTTACAAG 59.032 33.333 9.79 1.84 41.14 3.16
77 78 7.821652 TCAAATGATAGCCAAATCGTTTACAA 58.178 30.769 9.79 0.62 41.14 2.41
78 79 7.384439 TCAAATGATAGCCAAATCGTTTACA 57.616 32.000 9.79 0.00 41.14 2.41
79 80 8.128582 TCATCAAATGATAGCCAAATCGTTTAC 58.871 33.333 9.79 0.00 41.14 2.01
83 84 6.698008 TTCATCAAATGATAGCCAAATCGT 57.302 33.333 0.00 0.00 39.39 3.73
84 85 9.681692 TTTATTCATCAAATGATAGCCAAATCG 57.318 29.630 0.00 0.00 39.39 3.34
127 128 0.537371 CCCCGAGCCACTGACTTTTT 60.537 55.000 0.00 0.00 0.00 1.94
128 129 1.073199 CCCCGAGCCACTGACTTTT 59.927 57.895 0.00 0.00 0.00 2.27
129 130 2.750350 CCCCGAGCCACTGACTTT 59.250 61.111 0.00 0.00 0.00 2.66
131 132 3.625632 ATCCCCCGAGCCACTGACT 62.626 63.158 0.00 0.00 0.00 3.41
132 133 2.198304 AAATCCCCCGAGCCACTGAC 62.198 60.000 0.00 0.00 0.00 3.51
133 134 1.923395 AAATCCCCCGAGCCACTGA 60.923 57.895 0.00 0.00 0.00 3.41
134 135 1.750399 CAAATCCCCCGAGCCACTG 60.750 63.158 0.00 0.00 0.00 3.66
135 136 2.677228 CAAATCCCCCGAGCCACT 59.323 61.111 0.00 0.00 0.00 4.00
136 137 2.440247 CCAAATCCCCCGAGCCAC 60.440 66.667 0.00 0.00 0.00 5.01
139 140 1.453928 CCTTCCAAATCCCCCGAGC 60.454 63.158 0.00 0.00 0.00 5.03
140 141 0.181350 CTCCTTCCAAATCCCCCGAG 59.819 60.000 0.00 0.00 0.00 4.63
142 143 0.394352 CACTCCTTCCAAATCCCCCG 60.394 60.000 0.00 0.00 0.00 5.73
143 144 0.999712 TCACTCCTTCCAAATCCCCC 59.000 55.000 0.00 0.00 0.00 5.40
144 145 2.826128 GTTTCACTCCTTCCAAATCCCC 59.174 50.000 0.00 0.00 0.00 4.81
145 146 3.496331 TGTTTCACTCCTTCCAAATCCC 58.504 45.455 0.00 0.00 0.00 3.85
146 147 4.619160 GCATGTTTCACTCCTTCCAAATCC 60.619 45.833 0.00 0.00 0.00 3.01
148 149 3.057315 CGCATGTTTCACTCCTTCCAAAT 60.057 43.478 0.00 0.00 0.00 2.32
151 152 1.071542 TCGCATGTTTCACTCCTTCCA 59.928 47.619 0.00 0.00 0.00 3.53
152 153 1.734465 CTCGCATGTTTCACTCCTTCC 59.266 52.381 0.00 0.00 0.00 3.46
153 154 2.413453 GACTCGCATGTTTCACTCCTTC 59.587 50.000 0.00 0.00 0.00 3.46
154 155 2.037772 AGACTCGCATGTTTCACTCCTT 59.962 45.455 0.00 0.00 0.00 3.36
156 157 2.086054 AGACTCGCATGTTTCACTCC 57.914 50.000 0.00 0.00 0.00 3.85
157 158 3.059884 TGAAGACTCGCATGTTTCACTC 58.940 45.455 0.00 0.00 0.00 3.51
158 159 3.111853 TGAAGACTCGCATGTTTCACT 57.888 42.857 0.00 0.00 0.00 3.41
159 160 3.494626 TCTTGAAGACTCGCATGTTTCAC 59.505 43.478 0.00 0.00 0.00 3.18
163 164 3.466836 TGTTCTTGAAGACTCGCATGTT 58.533 40.909 0.00 0.00 0.00 2.71
164 165 3.111853 TGTTCTTGAAGACTCGCATGT 57.888 42.857 0.00 0.00 0.00 3.21
165 166 4.472691 TTTGTTCTTGAAGACTCGCATG 57.527 40.909 0.00 0.00 0.00 4.06
168 169 4.732285 TGATTTGTTCTTGAAGACTCGC 57.268 40.909 0.00 0.00 0.00 5.03
169 170 6.048073 TGTTGATTTGTTCTTGAAGACTCG 57.952 37.500 0.00 0.00 0.00 4.18
172 173 6.074142 GGCATTGTTGATTTGTTCTTGAAGAC 60.074 38.462 0.00 0.00 0.00 3.01
173 174 5.984926 GGCATTGTTGATTTGTTCTTGAAGA 59.015 36.000 0.00 0.00 0.00 2.87
174 175 5.754406 TGGCATTGTTGATTTGTTCTTGAAG 59.246 36.000 0.00 0.00 0.00 3.02
175 176 5.668471 TGGCATTGTTGATTTGTTCTTGAA 58.332 33.333 0.00 0.00 0.00 2.69
176 177 5.068855 TCTGGCATTGTTGATTTGTTCTTGA 59.931 36.000 0.00 0.00 0.00 3.02
177 178 5.291178 TCTGGCATTGTTGATTTGTTCTTG 58.709 37.500 0.00 0.00 0.00 3.02
178 179 5.069516 ACTCTGGCATTGTTGATTTGTTCTT 59.930 36.000 0.00 0.00 0.00 2.52
179 180 4.586001 ACTCTGGCATTGTTGATTTGTTCT 59.414 37.500 0.00 0.00 0.00 3.01
180 181 4.874970 ACTCTGGCATTGTTGATTTGTTC 58.125 39.130 0.00 0.00 0.00 3.18
181 182 4.586001 AGACTCTGGCATTGTTGATTTGTT 59.414 37.500 0.00 0.00 0.00 2.83
183 184 4.778534 AGACTCTGGCATTGTTGATTTG 57.221 40.909 0.00 0.00 0.00 2.32
185 186 4.401022 TCAAGACTCTGGCATTGTTGATT 58.599 39.130 0.00 0.00 0.00 2.57
186 187 4.008330 CTCAAGACTCTGGCATTGTTGAT 58.992 43.478 0.00 0.00 0.00 2.57
187 188 3.181451 ACTCAAGACTCTGGCATTGTTGA 60.181 43.478 0.00 0.00 0.00 3.18
188 189 3.144506 ACTCAAGACTCTGGCATTGTTG 58.855 45.455 0.00 0.00 0.00 3.33
189 190 3.072184 AGACTCAAGACTCTGGCATTGTT 59.928 43.478 0.00 0.00 0.00 2.83
190 191 2.636893 AGACTCAAGACTCTGGCATTGT 59.363 45.455 0.00 0.00 0.00 2.71
191 192 3.331478 AGACTCAAGACTCTGGCATTG 57.669 47.619 0.00 0.00 0.00 2.82
192 193 4.363991 AAAGACTCAAGACTCTGGCATT 57.636 40.909 0.00 0.00 0.00 3.56
193 194 5.690464 ATAAAGACTCAAGACTCTGGCAT 57.310 39.130 0.00 0.00 0.00 4.40
194 195 5.489792 AATAAAGACTCAAGACTCTGGCA 57.510 39.130 0.00 0.00 0.00 4.92
195 196 6.809630 AAAATAAAGACTCAAGACTCTGGC 57.190 37.500 0.00 0.00 0.00 4.85
232 233 9.231297 GCATATGTTTTATTGCTCCTAGGATAA 57.769 33.333 13.12 11.31 32.41 1.75
233 234 7.549134 CGCATATGTTTTATTGCTCCTAGGATA 59.451 37.037 13.12 1.40 32.97 2.59
235 236 5.700832 CGCATATGTTTTATTGCTCCTAGGA 59.299 40.000 11.98 11.98 32.97 2.94
236 237 5.700832 TCGCATATGTTTTATTGCTCCTAGG 59.299 40.000 0.82 0.82 32.97 3.02
237 238 6.425114 ACTCGCATATGTTTTATTGCTCCTAG 59.575 38.462 4.29 0.00 32.97 3.02
239 240 5.126067 ACTCGCATATGTTTTATTGCTCCT 58.874 37.500 4.29 0.00 32.97 3.69
240 241 5.424121 ACTCGCATATGTTTTATTGCTCC 57.576 39.130 4.29 0.00 32.97 4.70
241 242 7.044052 GGAAAACTCGCATATGTTTTATTGCTC 60.044 37.037 4.29 0.00 43.61 4.26
242 243 6.751888 GGAAAACTCGCATATGTTTTATTGCT 59.248 34.615 4.29 0.00 43.61 3.91
243 244 6.751888 AGGAAAACTCGCATATGTTTTATTGC 59.248 34.615 4.29 0.00 43.61 3.56
244 245 9.221775 GTAGGAAAACTCGCATATGTTTTATTG 57.778 33.333 4.29 0.00 43.61 1.90
245 246 9.174166 AGTAGGAAAACTCGCATATGTTTTATT 57.826 29.630 4.29 0.00 43.61 1.40
246 247 8.732746 AGTAGGAAAACTCGCATATGTTTTAT 57.267 30.769 4.29 0.00 43.61 1.40
248 249 7.822822 ACTAGTAGGAAAACTCGCATATGTTTT 59.177 33.333 4.29 3.19 45.42 2.43
249 250 7.328737 ACTAGTAGGAAAACTCGCATATGTTT 58.671 34.615 4.29 0.00 37.92 2.83
250 251 6.875076 ACTAGTAGGAAAACTCGCATATGTT 58.125 36.000 4.29 0.00 0.00 2.71
252 253 6.757010 ACAACTAGTAGGAAAACTCGCATATG 59.243 38.462 0.00 0.00 0.00 1.78
253 254 6.875076 ACAACTAGTAGGAAAACTCGCATAT 58.125 36.000 0.00 0.00 0.00 1.78
254 255 6.276832 ACAACTAGTAGGAAAACTCGCATA 57.723 37.500 0.00 0.00 0.00 3.14
255 256 5.148651 ACAACTAGTAGGAAAACTCGCAT 57.851 39.130 0.00 0.00 0.00 4.73
256 257 4.595762 ACAACTAGTAGGAAAACTCGCA 57.404 40.909 0.00 0.00 0.00 5.10
257 258 5.919272 AAACAACTAGTAGGAAAACTCGC 57.081 39.130 0.00 0.00 0.00 5.03
258 259 7.691158 ACAAAAACAACTAGTAGGAAAACTCG 58.309 34.615 0.00 0.00 0.00 4.18
259 260 9.850628 AAACAAAAACAACTAGTAGGAAAACTC 57.149 29.630 0.00 0.00 0.00 3.01
263 264 9.849166 CTTCAAACAAAAACAACTAGTAGGAAA 57.151 29.630 0.00 0.00 0.00 3.13
264 265 9.016438 ACTTCAAACAAAAACAACTAGTAGGAA 57.984 29.630 0.00 0.00 0.00 3.36
266 267 8.674607 AGACTTCAAACAAAAACAACTAGTAGG 58.325 33.333 0.00 0.00 0.00 3.18
269 270 9.191995 CAAAGACTTCAAACAAAAACAACTAGT 57.808 29.630 0.00 0.00 0.00 2.57
271 272 9.535878 AACAAAGACTTCAAACAAAAACAACTA 57.464 25.926 0.00 0.00 0.00 2.24
272 273 8.432110 AACAAAGACTTCAAACAAAAACAACT 57.568 26.923 0.00 0.00 0.00 3.16
273 274 9.153952 GAAACAAAGACTTCAAACAAAAACAAC 57.846 29.630 0.00 0.00 0.00 3.32
274 275 8.883731 TGAAACAAAGACTTCAAACAAAAACAA 58.116 25.926 0.00 0.00 0.00 2.83
275 276 8.425577 TGAAACAAAGACTTCAAACAAAAACA 57.574 26.923 0.00 0.00 0.00 2.83
276 277 9.877137 AATGAAACAAAGACTTCAAACAAAAAC 57.123 25.926 0.00 0.00 35.31 2.43
287 288 9.045223 GCCTTCAATAAAATGAAACAAAGACTT 57.955 29.630 0.00 0.00 38.75 3.01
289 290 8.275632 GTGCCTTCAATAAAATGAAACAAAGAC 58.724 33.333 0.00 0.00 38.75 3.01
291 292 7.042791 ACGTGCCTTCAATAAAATGAAACAAAG 60.043 33.333 0.00 0.00 38.75 2.77
293 294 6.199908 CACGTGCCTTCAATAAAATGAAACAA 59.800 34.615 0.82 0.00 38.75 2.83
294 295 5.689514 CACGTGCCTTCAATAAAATGAAACA 59.310 36.000 0.82 0.00 38.75 2.83
295 296 5.118510 CCACGTGCCTTCAATAAAATGAAAC 59.881 40.000 10.91 0.00 38.75 2.78
298 299 3.366883 GCCACGTGCCTTCAATAAAATGA 60.367 43.478 10.91 0.00 0.00 2.57
300 301 2.560542 TGCCACGTGCCTTCAATAAAAT 59.439 40.909 10.91 0.00 40.16 1.82
301 302 1.957177 TGCCACGTGCCTTCAATAAAA 59.043 42.857 10.91 0.00 40.16 1.52
302 303 1.610363 TGCCACGTGCCTTCAATAAA 58.390 45.000 10.91 0.00 40.16 1.40
303 304 1.610363 TTGCCACGTGCCTTCAATAA 58.390 45.000 10.91 0.00 40.16 1.40
305 306 0.314935 CTTTGCCACGTGCCTTCAAT 59.685 50.000 10.91 0.00 40.16 2.57
306 307 1.732917 CTTTGCCACGTGCCTTCAA 59.267 52.632 10.91 8.22 40.16 2.69
308 309 2.050077 GCTTTGCCACGTGCCTTC 60.050 61.111 10.91 0.00 40.16 3.46
309 310 2.832661 TGCTTTGCCACGTGCCTT 60.833 55.556 10.91 0.00 40.16 4.35
310 311 3.595758 GTGCTTTGCCACGTGCCT 61.596 61.111 10.91 0.00 40.16 4.75
311 312 3.211564 ATGTGCTTTGCCACGTGCC 62.212 57.895 10.91 0.00 40.16 5.01
315 316 1.372004 CACCATGTGCTTTGCCACG 60.372 57.895 0.00 0.00 38.55 4.94
317 318 1.794151 CGACACCATGTGCTTTGCCA 61.794 55.000 0.00 0.00 36.98 4.92
318 319 1.081242 CGACACCATGTGCTTTGCC 60.081 57.895 0.00 0.00 36.98 4.52
319 320 1.081242 CCGACACCATGTGCTTTGC 60.081 57.895 0.00 0.00 36.98 3.68
320 321 0.238289 GACCGACACCATGTGCTTTG 59.762 55.000 0.00 0.00 36.98 2.77
321 322 1.227999 CGACCGACACCATGTGCTTT 61.228 55.000 0.00 0.00 36.98 3.51
322 323 1.667830 CGACCGACACCATGTGCTT 60.668 57.895 0.00 0.00 36.98 3.91
323 324 1.529152 TACGACCGACACCATGTGCT 61.529 55.000 0.00 0.00 36.98 4.40
325 326 2.004583 AATACGACCGACACCATGTG 57.995 50.000 0.00 0.00 39.75 3.21
326 327 3.382227 TCATAATACGACCGACACCATGT 59.618 43.478 0.00 0.00 0.00 3.21
328 329 4.659111 TTCATAATACGACCGACACCAT 57.341 40.909 0.00 0.00 0.00 3.55
329 330 4.659111 ATTCATAATACGACCGACACCA 57.341 40.909 0.00 0.00 0.00 4.17
330 331 6.864685 TGATTATTCATAATACGACCGACACC 59.135 38.462 0.00 0.00 33.37 4.16
331 332 7.862741 TGATTATTCATAATACGACCGACAC 57.137 36.000 0.00 0.00 33.37 3.67
333 334 8.592998 GGATTGATTATTCATAATACGACCGAC 58.407 37.037 0.00 0.00 33.37 4.79
334 335 8.308207 TGGATTGATTATTCATAATACGACCGA 58.692 33.333 0.00 0.00 33.37 4.69
335 336 8.474006 TGGATTGATTATTCATAATACGACCG 57.526 34.615 0.00 0.00 33.37 4.79
365 366 8.757982 AGTCTTAACTTATGATTTGCATCCAT 57.242 30.769 0.00 0.00 38.44 3.41
366 367 8.579850 AAGTCTTAACTTATGATTTGCATCCA 57.420 30.769 0.00 0.00 43.98 3.41
367 368 9.294030 CAAAGTCTTAACTTATGATTTGCATCC 57.706 33.333 0.00 0.00 45.07 3.51
370 371 8.177119 ACCAAAGTCTTAACTTATGATTTGCA 57.823 30.769 0.00 0.00 45.07 4.08
371 372 9.774742 CTACCAAAGTCTTAACTTATGATTTGC 57.225 33.333 0.00 0.00 45.07 3.68
372 373 9.774742 GCTACCAAAGTCTTAACTTATGATTTG 57.225 33.333 0.00 0.00 45.07 2.32
377 378 9.303537 GACTAGCTACCAAAGTCTTAACTTATG 57.696 37.037 6.37 0.00 45.07 1.90
379 380 8.413309 TGACTAGCTACCAAAGTCTTAACTTA 57.587 34.615 13.37 0.00 45.07 2.24
381 382 6.912951 TGACTAGCTACCAAAGTCTTAACT 57.087 37.500 13.37 0.00 40.25 2.24
382 383 7.153315 ACTTGACTAGCTACCAAAGTCTTAAC 58.847 38.462 13.37 0.00 40.25 2.01
383 384 7.014905 TGACTTGACTAGCTACCAAAGTCTTAA 59.985 37.037 24.32 10.50 40.25 1.85
384 385 6.492429 TGACTTGACTAGCTACCAAAGTCTTA 59.508 38.462 24.32 12.37 40.25 2.10
385 386 5.304614 TGACTTGACTAGCTACCAAAGTCTT 59.695 40.000 24.32 9.41 40.25 3.01
386 387 4.833380 TGACTTGACTAGCTACCAAAGTCT 59.167 41.667 24.32 6.45 40.25 3.24
387 388 5.135508 TGACTTGACTAGCTACCAAAGTC 57.864 43.478 20.67 20.67 40.05 3.01
388 389 5.070580 ACTTGACTTGACTAGCTACCAAAGT 59.929 40.000 9.03 9.03 0.00 2.66
389 390 5.542779 ACTTGACTTGACTAGCTACCAAAG 58.457 41.667 0.00 0.00 0.00 2.77
390 391 5.069914 TGACTTGACTTGACTAGCTACCAAA 59.930 40.000 0.00 0.00 0.00 3.28
392 393 4.149598 TGACTTGACTTGACTAGCTACCA 58.850 43.478 0.00 0.00 0.00 3.25
393 394 4.785511 TGACTTGACTTGACTAGCTACC 57.214 45.455 0.00 0.00 0.00 3.18
394 395 4.924462 GGTTGACTTGACTTGACTAGCTAC 59.076 45.833 0.00 0.00 0.00 3.58
396 397 3.388024 TGGTTGACTTGACTTGACTAGCT 59.612 43.478 0.00 0.00 0.00 3.32
397 398 3.728845 TGGTTGACTTGACTTGACTAGC 58.271 45.455 0.00 0.00 0.00 3.42
398 399 6.677781 TTTTGGTTGACTTGACTTGACTAG 57.322 37.500 0.00 0.00 0.00 2.57
401 402 7.382218 CCATTATTTTGGTTGACTTGACTTGAC 59.618 37.037 0.00 0.00 31.74 3.18
402 403 7.286546 TCCATTATTTTGGTTGACTTGACTTGA 59.713 33.333 0.00 0.00 38.01 3.02
403 404 7.432869 TCCATTATTTTGGTTGACTTGACTTG 58.567 34.615 0.00 0.00 38.01 3.16
404 405 7.287696 ACTCCATTATTTTGGTTGACTTGACTT 59.712 33.333 0.00 0.00 38.01 3.01
405 406 6.777580 ACTCCATTATTTTGGTTGACTTGACT 59.222 34.615 0.00 0.00 38.01 3.41
406 407 6.981722 ACTCCATTATTTTGGTTGACTTGAC 58.018 36.000 0.00 0.00 38.01 3.18
407 408 7.942341 AGTACTCCATTATTTTGGTTGACTTGA 59.058 33.333 0.00 0.00 38.01 3.02
408 409 8.110860 AGTACTCCATTATTTTGGTTGACTTG 57.889 34.615 0.00 0.00 38.01 3.16
409 410 9.449719 CTAGTACTCCATTATTTTGGTTGACTT 57.550 33.333 0.00 0.00 38.01 3.01
410 411 8.603304 ACTAGTACTCCATTATTTTGGTTGACT 58.397 33.333 0.00 0.00 38.01 3.41
411 412 8.788325 ACTAGTACTCCATTATTTTGGTTGAC 57.212 34.615 0.00 0.00 38.01 3.18
413 414 8.827677 GCTACTAGTACTCCATTATTTTGGTTG 58.172 37.037 0.00 0.00 38.01 3.77
414 415 8.545472 TGCTACTAGTACTCCATTATTTTGGTT 58.455 33.333 0.00 0.00 38.01 3.67
415 416 7.985752 GTGCTACTAGTACTCCATTATTTTGGT 59.014 37.037 0.00 0.00 38.01 3.67
417 418 8.942338 TGTGCTACTAGTACTCCATTATTTTG 57.058 34.615 0.00 0.00 31.77 2.44
421 422 9.765795 GAAATTGTGCTACTAGTACTCCATTAT 57.234 33.333 0.00 0.00 31.77 1.28
423 424 7.620880 TGAAATTGTGCTACTAGTACTCCATT 58.379 34.615 0.00 0.00 31.77 3.16
424 425 7.124298 TCTGAAATTGTGCTACTAGTACTCCAT 59.876 37.037 0.00 0.00 31.77 3.41
425 426 6.436218 TCTGAAATTGTGCTACTAGTACTCCA 59.564 38.462 0.00 0.00 31.77 3.86
426 427 6.864342 TCTGAAATTGTGCTACTAGTACTCC 58.136 40.000 0.00 0.00 31.77 3.85
427 428 8.410141 AGATCTGAAATTGTGCTACTAGTACTC 58.590 37.037 0.00 0.00 31.77 2.59
428 429 8.299990 AGATCTGAAATTGTGCTACTAGTACT 57.700 34.615 0.00 0.00 31.77 2.73
429 430 7.377397 CGAGATCTGAAATTGTGCTACTAGTAC 59.623 40.741 0.00 0.00 0.00 2.73
430 431 7.418408 CGAGATCTGAAATTGTGCTACTAGTA 58.582 38.462 0.00 1.89 0.00 1.82
432 433 5.174761 GCGAGATCTGAAATTGTGCTACTAG 59.825 44.000 0.00 0.00 0.00 2.57
434 435 3.868077 GCGAGATCTGAAATTGTGCTACT 59.132 43.478 0.00 0.00 0.00 2.57
435 436 3.868077 AGCGAGATCTGAAATTGTGCTAC 59.132 43.478 0.00 0.00 0.00 3.58
436 437 4.115516 GAGCGAGATCTGAAATTGTGCTA 58.884 43.478 0.00 0.00 0.00 3.49
437 438 2.935201 GAGCGAGATCTGAAATTGTGCT 59.065 45.455 0.00 0.00 0.00 4.40
442 443 2.100584 AGAGCGAGCGAGATCTGAAATT 59.899 45.455 0.00 0.00 35.33 1.82
445 446 0.660488 GAGAGCGAGCGAGATCTGAA 59.340 55.000 0.00 0.00 36.96 3.02
446 447 0.179059 AGAGAGCGAGCGAGATCTGA 60.179 55.000 0.00 0.00 36.96 3.27
447 448 0.235665 GAGAGAGCGAGCGAGATCTG 59.764 60.000 0.00 0.00 36.96 2.90
448 449 0.106708 AGAGAGAGCGAGCGAGATCT 59.893 55.000 0.00 0.00 39.87 2.75
449 450 0.512952 GAGAGAGAGCGAGCGAGATC 59.487 60.000 0.00 0.00 0.00 2.75
451 452 0.391793 TTGAGAGAGAGCGAGCGAGA 60.392 55.000 0.00 0.00 0.00 4.04
454 455 1.586042 GCTTGAGAGAGAGCGAGCG 60.586 63.158 0.00 0.00 32.37 5.03
457 458 1.472082 CTTCAGCTTGAGAGAGAGCGA 59.528 52.381 0.00 0.00 43.53 4.93
458 459 1.912001 CTTCAGCTTGAGAGAGAGCG 58.088 55.000 0.00 0.00 43.53 5.03
459 460 1.643880 GCTTCAGCTTGAGAGAGAGC 58.356 55.000 0.00 0.00 39.17 4.09
477 478 2.754658 ATGGCAGCCAGCTTCAGC 60.755 61.111 21.51 0.00 44.79 4.26
478 479 3.510846 GATGGCAGCCAGCTTCAG 58.489 61.111 23.08 0.00 44.79 3.02
483 484 4.891037 GGGGAGATGGCAGCCAGC 62.891 72.222 22.90 22.90 40.67 4.85
484 485 4.559063 CGGGGAGATGGCAGCCAG 62.559 72.222 21.51 0.00 36.75 4.85
523 524 4.093291 AGGAAGAGCAGCAGGGCG 62.093 66.667 0.00 0.00 39.27 6.13
524 525 2.124778 GAGGAAGAGCAGCAGGGC 60.125 66.667 0.00 0.00 0.00 5.19
527 528 1.141449 CGGAGAGGAAGAGCAGCAG 59.859 63.158 0.00 0.00 0.00 4.24
528 529 3.011635 GCGGAGAGGAAGAGCAGCA 62.012 63.158 0.00 0.00 0.00 4.41
529 530 2.202864 GCGGAGAGGAAGAGCAGC 60.203 66.667 0.00 0.00 0.00 5.25
530 531 2.015227 GAGGCGGAGAGGAAGAGCAG 62.015 65.000 0.00 0.00 0.00 4.24
531 532 2.038007 AGGCGGAGAGGAAGAGCA 59.962 61.111 0.00 0.00 0.00 4.26
532 533 2.811799 GAGGCGGAGAGGAAGAGC 59.188 66.667 0.00 0.00 0.00 4.09
533 534 3.115556 CGAGGCGGAGAGGAAGAG 58.884 66.667 0.00 0.00 0.00 2.85
557 558 4.778143 ATCCGGGTTGTGGAGCGC 62.778 66.667 0.00 0.00 39.30 5.92
558 559 2.511600 GATCCGGGTTGTGGAGCG 60.512 66.667 0.00 0.00 39.30 5.03
559 560 1.450312 CAGATCCGGGTTGTGGAGC 60.450 63.158 0.00 0.00 42.22 4.70
562 563 1.078426 GTCCAGATCCGGGTTGTGG 60.078 63.158 13.72 13.72 0.00 4.17
563 564 1.078426 GGTCCAGATCCGGGTTGTG 60.078 63.158 0.00 0.00 0.00 3.33
566 567 2.670148 GCTGGTCCAGATCCGGGTT 61.670 63.158 23.77 0.00 32.44 4.11
567 568 3.083997 GCTGGTCCAGATCCGGGT 61.084 66.667 23.77 0.00 32.44 5.28
568 569 3.866582 GGCTGGTCCAGATCCGGG 61.867 72.222 23.77 0.00 32.44 5.73
570 571 4.899239 GCGGCTGGTCCAGATCCG 62.899 72.222 25.58 25.58 39.12 4.18
571 572 3.785859 TGCGGCTGGTCCAGATCC 61.786 66.667 23.77 13.81 32.44 3.36
573 574 4.101448 GGTGCGGCTGGTCCAGAT 62.101 66.667 23.77 0.00 32.44 2.90
604 605 2.745100 ATGTGCTGCTGCTGTCGG 60.745 61.111 17.00 0.00 40.48 4.79
605 606 1.967597 CTGATGTGCTGCTGCTGTCG 61.968 60.000 17.00 5.41 40.48 4.35
606 607 1.645704 CCTGATGTGCTGCTGCTGTC 61.646 60.000 17.00 11.69 40.48 3.51
607 608 1.674651 CCTGATGTGCTGCTGCTGT 60.675 57.895 17.00 2.56 40.48 4.40
608 609 0.392060 TACCTGATGTGCTGCTGCTG 60.392 55.000 17.00 0.77 40.48 4.41
609 610 0.392193 GTACCTGATGTGCTGCTGCT 60.392 55.000 17.00 0.00 40.48 4.24
610 611 1.372087 GGTACCTGATGTGCTGCTGC 61.372 60.000 8.89 8.89 40.20 5.25
611 612 0.036105 TGGTACCTGATGTGCTGCTG 60.036 55.000 14.36 0.00 0.00 4.41
613 614 1.533625 TTTGGTACCTGATGTGCTGC 58.466 50.000 14.36 0.00 0.00 5.25
614 615 2.095059 GCTTTTGGTACCTGATGTGCTG 60.095 50.000 14.36 0.00 0.00 4.41
615 616 2.162681 GCTTTTGGTACCTGATGTGCT 58.837 47.619 14.36 0.00 0.00 4.40
616 617 1.202348 GGCTTTTGGTACCTGATGTGC 59.798 52.381 14.36 9.64 0.00 4.57
621 4965 2.026262 GGATCTGGCTTTTGGTACCTGA 60.026 50.000 14.36 0.00 36.10 3.86
661 5005 4.432741 GAAGGAGGGCAGGGGCAC 62.433 72.222 0.00 0.00 46.58 5.01
662 5006 4.682714 AGAAGGAGGGCAGGGGCA 62.683 66.667 0.00 0.00 43.71 5.36
663 5007 2.845638 GAAAGAAGGAGGGCAGGGGC 62.846 65.000 0.00 0.00 40.13 5.80
685 5029 1.077068 AGTGCGAGAGGAGGAGGAG 60.077 63.158 0.00 0.00 0.00 3.69
686 5030 1.379176 CAGTGCGAGAGGAGGAGGA 60.379 63.158 0.00 0.00 0.00 3.71
703 5047 0.733909 CAGATCGAAGCTGTGCGACA 60.734 55.000 8.49 0.00 39.56 4.35
704 5048 0.456824 TCAGATCGAAGCTGTGCGAC 60.457 55.000 15.55 4.33 39.56 5.19
705 5049 0.456824 GTCAGATCGAAGCTGTGCGA 60.457 55.000 15.55 8.70 41.14 5.10
706 5050 0.733909 TGTCAGATCGAAGCTGTGCG 60.734 55.000 15.55 0.00 34.98 5.34
707 5051 1.326852 CATGTCAGATCGAAGCTGTGC 59.673 52.381 15.55 11.39 34.98 4.57
708 5052 1.326852 GCATGTCAGATCGAAGCTGTG 59.673 52.381 15.55 9.70 34.98 3.66
709 5053 1.649664 GCATGTCAGATCGAAGCTGT 58.350 50.000 15.55 0.00 34.98 4.40
710 5054 0.935898 GGCATGTCAGATCGAAGCTG 59.064 55.000 11.27 11.27 34.71 4.24
711 5055 0.529337 CGGCATGTCAGATCGAAGCT 60.529 55.000 0.00 0.00 0.00 3.74
759 5103 4.147322 CTGCTTAACGGCGGCGTG 62.147 66.667 38.07 25.53 34.52 5.34
819 5163 4.436998 CTCCCCGTGGTGCTCGTC 62.437 72.222 0.00 0.00 0.00 4.20
829 5173 3.637273 GTGGTCCTTGCTCCCCGT 61.637 66.667 0.00 0.00 0.00 5.28
840 5184 4.394712 CACCTCTGGCCGTGGTCC 62.395 72.222 15.41 0.00 37.40 4.46
879 5245 2.281761 ACTGAAGCTTGGGTGCCG 60.282 61.111 2.10 0.00 0.00 5.69
907 5273 2.966309 GAAGTTGGTGAAGGGCGCG 61.966 63.158 0.00 0.00 0.00 6.86
962 5328 1.076485 CCTGCCTTTCAGATGGGGG 60.076 63.158 0.00 0.00 45.72 5.40
972 5338 2.354343 GCTCCTGCTCCTGCCTTT 59.646 61.111 0.00 0.00 38.71 3.11
1188 5555 2.032681 AGCCAAAGACCCGTCAGC 59.967 61.111 0.00 0.00 0.00 4.26
1348 5970 8.638685 AAAAAGAAGTGTTGATGAAGATGTTG 57.361 30.769 0.00 0.00 0.00 3.33
1359 5996 8.871862 CATCATTTGTTGAAAAAGAAGTGTTGA 58.128 29.630 0.00 0.00 38.03 3.18
1545 6283 4.168101 TGTCTAGTTCATCCAAGGTTCCT 58.832 43.478 0.00 0.00 0.00 3.36
1546 6284 4.553330 TGTCTAGTTCATCCAAGGTTCC 57.447 45.455 0.00 0.00 0.00 3.62
1549 6287 3.846588 ACCATGTCTAGTTCATCCAAGGT 59.153 43.478 0.00 0.00 0.00 3.50
2351 7097 9.850628 CACATGTCATCTAAAACAATCAGAATT 57.149 29.630 0.00 0.00 0.00 2.17
2373 7119 4.214310 TGAAACATGTTGTCTTCCCACAT 58.786 39.130 12.82 0.00 0.00 3.21
2717 7463 1.214175 TCCAAAGAAGGTGCAGTCCAA 59.786 47.619 0.00 0.00 0.00 3.53
2984 7731 9.881529 GAACAATGAAAACACGTAAAAGGTATA 57.118 29.630 0.00 0.00 0.00 1.47
3118 7884 7.751732 TGCACTGTAAGAAATGATTATGTGAC 58.248 34.615 0.00 0.00 37.43 3.67
3132 7898 3.207265 TGGAAAAGCTGCACTGTAAGA 57.793 42.857 1.02 0.00 37.43 2.10
3224 8024 6.683974 AGCATGCTACAGTAAAACCAATAG 57.316 37.500 21.21 0.00 0.00 1.73
3319 8122 6.093617 AGTACTCCCTCGGATCCATATTAT 57.906 41.667 13.41 0.00 0.00 1.28
3480 8299 5.411781 AGATTAAGTTCTCGCACCAAGTAG 58.588 41.667 0.00 0.00 0.00 2.57
3632 11658 3.588842 TCTCCATGATGGTTTCCAAGACT 59.411 43.478 11.87 0.00 39.03 3.24
3681 11707 6.316640 CCGTGGTATTTTGTGATGGTATTGTA 59.683 38.462 0.00 0.00 0.00 2.41
3731 11759 2.605366 GGCGCTATAGCTTGCTATTAGC 59.395 50.000 21.98 20.00 39.46 3.09
3732 11760 2.854777 CGGCGCTATAGCTTGCTATTAG 59.145 50.000 21.98 14.22 39.32 1.73
3733 11761 2.876091 CGGCGCTATAGCTTGCTATTA 58.124 47.619 21.98 6.17 39.32 0.98
3734 11762 1.714794 CGGCGCTATAGCTTGCTATT 58.285 50.000 21.98 5.43 39.32 1.73
3735 11763 0.737715 GCGGCGCTATAGCTTGCTAT 60.738 55.000 26.86 17.67 39.32 2.97
3736 11764 1.372997 GCGGCGCTATAGCTTGCTA 60.373 57.895 26.86 4.72 39.32 3.49
3737 11765 1.806461 TAGCGGCGCTATAGCTTGCT 61.806 55.000 35.39 27.19 45.38 3.91
3738 11766 0.944311 TTAGCGGCGCTATAGCTTGC 60.944 55.000 38.35 20.36 41.01 4.01
3739 11767 1.714794 ATTAGCGGCGCTATAGCTTG 58.285 50.000 38.35 12.31 41.01 4.01
3740 11768 2.735762 GCTATTAGCGGCGCTATAGCTT 60.736 50.000 39.25 27.74 41.01 3.74
3741 11769 1.202313 GCTATTAGCGGCGCTATAGCT 60.202 52.381 39.25 29.24 41.01 3.32
3742 11770 1.201343 GCTATTAGCGGCGCTATAGC 58.799 55.000 37.08 37.08 41.01 2.97
3743 11771 2.561733 TGCTATTAGCGGCGCTATAG 57.438 50.000 38.35 34.01 46.26 1.31
3744 11772 2.876091 CTTGCTATTAGCGGCGCTATA 58.124 47.619 38.35 28.19 46.26 1.31
3745 11773 1.714794 CTTGCTATTAGCGGCGCTAT 58.285 50.000 38.35 28.53 46.26 2.97
3746 11774 0.944311 GCTTGCTATTAGCGGCGCTA 60.944 55.000 35.39 35.39 46.26 4.26
3747 11775 2.247437 GCTTGCTATTAGCGGCGCT 61.247 57.895 37.84 37.84 46.26 5.92
3748 11776 0.944311 TAGCTTGCTATTAGCGGCGC 60.944 55.000 26.86 26.86 46.26 6.53
3749 11777 1.714794 ATAGCTTGCTATTAGCGGCG 58.285 50.000 20.07 0.51 46.26 6.46
3750 11778 2.605366 GCTATAGCTTGCTATTAGCGGC 59.395 50.000 17.75 19.21 43.37 6.53
3751 11779 2.854777 CGCTATAGCTTGCTATTAGCGG 59.145 50.000 30.73 22.08 45.31 5.52
3753 11781 2.605366 GGCGCTATAGCTTGCTATTAGC 59.395 50.000 21.98 20.00 39.46 3.09
3754 11782 2.854777 CGGCGCTATAGCTTGCTATTAG 59.145 50.000 21.98 14.22 39.32 1.73
3755 11783 2.876091 CGGCGCTATAGCTTGCTATTA 58.124 47.619 21.98 6.17 39.32 0.98
3756 11784 1.714794 CGGCGCTATAGCTTGCTATT 58.285 50.000 21.98 5.43 39.32 1.73
3757 11785 0.737715 GCGGCGCTATAGCTTGCTAT 60.738 55.000 26.86 17.67 39.32 2.97
3758 11786 1.372997 GCGGCGCTATAGCTTGCTA 60.373 57.895 26.86 4.72 39.32 3.49
3759 11787 1.806461 TAGCGGCGCTATAGCTTGCT 61.806 55.000 35.39 27.19 45.38 3.91
3760 11788 0.944311 TTAGCGGCGCTATAGCTTGC 60.944 55.000 38.35 20.36 41.01 4.01
3761 11789 1.714794 ATTAGCGGCGCTATAGCTTG 58.285 50.000 38.35 12.31 41.01 4.01
3762 11790 2.735762 GCTATTAGCGGCGCTATAGCTT 60.736 50.000 39.25 27.74 41.01 3.74
3763 11791 1.202313 GCTATTAGCGGCGCTATAGCT 60.202 52.381 39.25 29.24 41.01 3.32
3764 11792 1.201343 GCTATTAGCGGCGCTATAGC 58.799 55.000 37.08 37.08 41.01 2.97
3765 11793 2.561733 TGCTATTAGCGGCGCTATAG 57.438 50.000 38.35 34.01 46.26 1.31
3766 11794 2.876091 CTTGCTATTAGCGGCGCTATA 58.124 47.619 38.35 28.19 46.26 1.31
3767 11795 1.714794 CTTGCTATTAGCGGCGCTAT 58.285 50.000 38.35 28.53 46.26 2.97
3768 11796 0.944311 GCTTGCTATTAGCGGCGCTA 60.944 55.000 35.39 35.39 46.26 4.26
3769 11797 2.247437 GCTTGCTATTAGCGGCGCT 61.247 57.895 37.84 37.84 46.26 5.92
3770 11798 0.944311 TAGCTTGCTATTAGCGGCGC 60.944 55.000 26.86 26.86 46.26 6.53
3771 11799 1.714794 ATAGCTTGCTATTAGCGGCG 58.285 50.000 20.07 0.51 46.26 6.46
3772 11800 2.605366 GCTATAGCTTGCTATTAGCGGC 59.395 50.000 17.75 19.21 43.37 6.53
3773 11801 2.854777 CGCTATAGCTTGCTATTAGCGG 59.145 50.000 30.73 22.08 45.31 5.52
3775 11803 2.605366 GGCGCTATAGCTTGCTATTAGC 59.395 50.000 21.98 20.00 39.46 3.09
3776 11804 2.854777 CGGCGCTATAGCTTGCTATTAG 59.145 50.000 21.98 14.22 39.32 1.73
3777 11805 2.876091 CGGCGCTATAGCTTGCTATTA 58.124 47.619 21.98 6.17 39.32 0.98
3778 11806 1.714794 CGGCGCTATAGCTTGCTATT 58.285 50.000 21.98 5.43 39.32 1.73
3779 11807 0.737715 GCGGCGCTATAGCTTGCTAT 60.738 55.000 26.86 17.67 39.32 2.97
3780 11808 1.372997 GCGGCGCTATAGCTTGCTA 60.373 57.895 26.86 4.72 39.32 3.49
3781 11809 1.806461 TAGCGGCGCTATAGCTTGCT 61.806 55.000 35.39 27.19 45.38 3.91
3782 11810 0.944311 TTAGCGGCGCTATAGCTTGC 60.944 55.000 38.35 20.36 41.01 4.01
3783 11811 1.714794 ATTAGCGGCGCTATAGCTTG 58.285 50.000 38.35 12.31 41.01 4.01
3784 11812 2.735762 GCTATTAGCGGCGCTATAGCTT 60.736 50.000 39.25 27.74 41.01 3.74
3785 11813 1.202313 GCTATTAGCGGCGCTATAGCT 60.202 52.381 39.25 29.24 41.01 3.32
3786 11814 1.201343 GCTATTAGCGGCGCTATAGC 58.799 55.000 37.08 37.08 41.01 2.97
3787 11815 2.561733 TGCTATTAGCGGCGCTATAG 57.438 50.000 38.35 34.01 46.26 1.31
3788 11816 2.876091 CTTGCTATTAGCGGCGCTATA 58.124 47.619 38.35 28.19 46.26 1.31
3789 11817 1.714794 CTTGCTATTAGCGGCGCTAT 58.285 50.000 38.35 28.53 46.26 2.97
3790 11818 0.944311 GCTTGCTATTAGCGGCGCTA 60.944 55.000 35.39 35.39 46.26 4.26
3791 11819 2.247437 GCTTGCTATTAGCGGCGCT 61.247 57.895 37.84 37.84 46.26 5.92
3792 11820 0.944311 TAGCTTGCTATTAGCGGCGC 60.944 55.000 26.86 26.86 46.26 6.53
3793 11821 1.714794 ATAGCTTGCTATTAGCGGCG 58.285 50.000 20.07 0.51 46.26 6.46
3794 11822 2.605366 GCTATAGCTTGCTATTAGCGGC 59.395 50.000 17.75 19.21 43.37 6.53
3795 11823 2.854777 CGCTATAGCTTGCTATTAGCGG 59.145 50.000 30.73 22.08 45.31 5.52
3807 11835 4.551388 GCAATTCTCTACACGCTATAGCT 58.449 43.478 21.98 6.68 39.32 3.32
3854 11919 6.537660 GTCACCCTTTGAAATACGCTATTAGT 59.462 38.462 0.00 0.00 35.39 2.24
3876 11941 3.244345 GCGCGCTATACAAAATAGTGTCA 59.756 43.478 26.67 0.00 35.27 3.58
3921 11986 4.593206 AGGGAGTATGTCTGAAACAGTTCA 59.407 41.667 0.00 0.00 42.37 3.18
4217 12609 3.245371 ACTTTTGGCTGATGGAAGATGGA 60.245 43.478 0.00 0.00 0.00 3.41
4418 12895 3.399234 ACCCAGTGGTCATAGCTGA 57.601 52.632 8.74 0.00 43.06 4.26
4518 12996 1.271054 GCCTGCATCATTAGATCCCGT 60.271 52.381 0.00 0.00 30.20 5.28
4543 13319 1.446907 CCTGCATCATTAGATCCCGC 58.553 55.000 0.00 0.00 30.20 6.13
4544 13320 1.002888 AGCCTGCATCATTAGATCCCG 59.997 52.381 0.00 0.00 30.20 5.14
4545 13321 2.875094 AGCCTGCATCATTAGATCCC 57.125 50.000 0.00 0.00 30.20 3.85
4546 13322 3.262915 AGGTAGCCTGCATCATTAGATCC 59.737 47.826 0.00 0.00 29.57 3.36
4548 13324 3.056250 CGAGGTAGCCTGCATCATTAGAT 60.056 47.826 0.00 0.00 31.76 1.98
4549 13325 2.297315 CGAGGTAGCCTGCATCATTAGA 59.703 50.000 0.00 0.00 31.76 2.10
4550 13326 2.681706 CGAGGTAGCCTGCATCATTAG 58.318 52.381 0.00 0.00 31.76 1.73
4551 13327 1.270305 GCGAGGTAGCCTGCATCATTA 60.270 52.381 0.00 0.00 31.76 1.90
4552 13328 0.533755 GCGAGGTAGCCTGCATCATT 60.534 55.000 0.00 0.00 31.76 2.57
4593 13371 3.305720 CACCTCCCTATGTAAGCAGGTA 58.694 50.000 0.00 0.00 0.00 3.08
4600 14563 2.688817 CGTCTCCCACCTCCCTATGTAA 60.689 54.545 0.00 0.00 0.00 2.41
4732 14706 3.667960 GCGAACACTAATGCAACAGAAGG 60.668 47.826 5.02 0.00 0.00 3.46
4866 14880 0.102300 GGTTCTTTTGCGCCAGTGTT 59.898 50.000 4.18 0.00 0.00 3.32
4890 14904 8.002984 ACATTGCAAGATCATATTTGATGACA 57.997 30.769 4.94 0.00 42.73 3.58
5036 16452 6.608610 ACATTTTATGCGTCAACTCCTTTAC 58.391 36.000 0.00 0.00 0.00 2.01
5121 16540 4.508861 GCAACAAAATCATTCAGCAGTGTT 59.491 37.500 0.00 0.00 0.00 3.32
5277 16696 4.961438 TCATCTAGCAATGCATAGTGGA 57.039 40.909 8.35 6.12 0.00 4.02
5460 16879 8.571461 AAGATATCTCAATTGCTTCAGTTCAA 57.429 30.769 5.51 0.00 0.00 2.69
5496 16915 4.410099 TGGAATCTTTGCATCTTGGACTT 58.590 39.130 0.00 0.00 0.00 3.01
5610 17029 6.371548 TGACAAATCAAGGTACATTAGACTGC 59.628 38.462 0.00 0.00 0.00 4.40
5611 17030 7.905604 TGACAAATCAAGGTACATTAGACTG 57.094 36.000 0.00 0.00 0.00 3.51
6180 17599 4.932268 TTTAAATACCGAAGCTTGGTCG 57.068 40.909 19.64 10.93 40.96 4.79
6217 17636 1.414158 TCCGATCATCCAAGGACCTC 58.586 55.000 0.00 0.00 0.00 3.85
6219 17638 1.762957 TCTTCCGATCATCCAAGGACC 59.237 52.381 0.00 0.00 31.69 4.46
6234 17668 6.685657 AGAAAAACTGATGCATCTTTCTTCC 58.314 36.000 24.94 13.27 30.88 3.46
6238 17672 7.022384 CAGAGAGAAAAACTGATGCATCTTTC 58.978 38.462 26.32 23.98 34.07 2.62
6249 17683 4.578105 AGGTTTCTGCAGAGAGAAAAACTG 59.422 41.667 17.43 0.00 42.27 3.16
6250 17684 4.578105 CAGGTTTCTGCAGAGAGAAAAACT 59.422 41.667 17.43 12.95 42.27 2.66
6252 17686 3.885297 CCAGGTTTCTGCAGAGAGAAAAA 59.115 43.478 17.43 4.21 42.27 1.94
6330 17770 4.491602 CGATCAGACAATTTCGAGACAAGC 60.492 45.833 0.00 0.00 33.59 4.01
6338 17778 6.143118 GGTATTCTCTCGATCAGACAATTTCG 59.857 42.308 0.00 0.00 0.00 3.46
6349 17789 8.973378 CAAATACTTTCAGGTATTCTCTCGATC 58.027 37.037 0.00 0.00 40.27 3.69
6352 17792 9.239002 CTACAAATACTTTCAGGTATTCTCTCG 57.761 37.037 0.00 0.00 40.27 4.04
6611 18055 5.489792 TCAAGTTCAGTTATCTCCAGCTT 57.510 39.130 0.00 0.00 0.00 3.74
6642 18086 3.695606 GTGCCTCTCCTGCGGACA 61.696 66.667 0.00 0.00 0.00 4.02
6937 18381 0.029834 GGCAGCCATCTATTTGCACG 59.970 55.000 6.55 0.00 38.27 5.34
6952 18396 2.651382 TCATCTTCATCATGGGGCAG 57.349 50.000 0.00 0.00 0.00 4.85
6962 18406 2.686118 GCAGAGGCCCTTTCATCTTCAT 60.686 50.000 0.00 0.00 0.00 2.57
6964 18408 1.387539 GCAGAGGCCCTTTCATCTTC 58.612 55.000 0.00 0.00 0.00 2.87
7184 18634 1.437986 GTGAGCCGGTTAGATCGCT 59.562 57.895 1.90 0.00 0.00 4.93
7440 18890 9.567776 TGTTATGTATCCAAAGTTTCTTGAGAA 57.432 29.630 0.00 0.00 0.00 2.87
7614 19065 0.252239 TAGAGAGGTGGGCAGAGCAA 60.252 55.000 0.00 0.00 0.00 3.91
7771 19231 5.193679 ACCCATACCTTCTTTTCTATGTGC 58.806 41.667 0.00 0.00 0.00 4.57
7792 19252 0.687354 TGCAAGACTGAAGGAGGACC 59.313 55.000 0.00 0.00 0.00 4.46
8230 24276 1.757118 TCGTGATTCCCTTAGCTCCTG 59.243 52.381 0.00 0.00 0.00 3.86
8231 24277 2.035632 CTCGTGATTCCCTTAGCTCCT 58.964 52.381 0.00 0.00 0.00 3.69
8232 24278 1.539280 GCTCGTGATTCCCTTAGCTCC 60.539 57.143 0.00 0.00 0.00 4.70
8234 24280 1.137872 CAGCTCGTGATTCCCTTAGCT 59.862 52.381 0.00 0.00 40.79 3.32
8235 24281 1.134670 ACAGCTCGTGATTCCCTTAGC 60.135 52.381 0.00 0.00 0.00 3.09
8236 24282 2.969628 ACAGCTCGTGATTCCCTTAG 57.030 50.000 0.00 0.00 0.00 2.18
8246 24292 3.190849 CCATCGCCACAGCTCGTG 61.191 66.667 8.73 8.73 45.92 4.35
8279 24325 1.072806 TCAGAGTTCCATGCTGCAACT 59.927 47.619 6.36 5.27 32.93 3.16
8347 25065 4.016113 AGCACAAAGAACAAAGTTCGAC 57.984 40.909 4.43 0.00 0.00 4.20
8353 25071 4.249181 GCACAAAGCACAAAGAACAAAG 57.751 40.909 0.00 0.00 44.79 2.77
8366 25092 4.798574 ACTATGCAAACTAAGCACAAAGC 58.201 39.130 0.00 0.00 45.95 3.51
8391 25117 2.693069 CAGTCATCGAAGCAGGAAACT 58.307 47.619 0.00 0.00 46.44 2.66
8407 25133 8.029642 ACACATATTACAAAACTAGTGCAGTC 57.970 34.615 0.00 0.00 36.04 3.51
8425 25151 8.255111 TCATCAATCTCTCTGGTTACACATAT 57.745 34.615 0.00 0.00 0.00 1.78
8429 25192 6.820656 ACAATCATCAATCTCTCTGGTTACAC 59.179 38.462 0.00 0.00 0.00 2.90
8431 25194 8.417106 TCTACAATCATCAATCTCTCTGGTTAC 58.583 37.037 0.00 0.00 0.00 2.50
8433 25196 7.429374 TCTACAATCATCAATCTCTCTGGTT 57.571 36.000 0.00 0.00 0.00 3.67
8444 25207 7.920160 TGCATACAAGTTCTACAATCATCAA 57.080 32.000 0.00 0.00 0.00 2.57
8445 25208 8.510243 AATGCATACAAGTTCTACAATCATCA 57.490 30.769 0.00 0.00 0.00 3.07
8471 25249 0.324368 TATCACGCTCACCAGGACCT 60.324 55.000 0.00 0.00 0.00 3.85
8491 25269 4.295870 TCTCAACAAGCAAGTACAGTACG 58.704 43.478 5.02 0.00 0.00 3.67
8534 25317 3.555956 ACAGACAAGACAAACTAGCAACG 59.444 43.478 0.00 0.00 0.00 4.10
8560 25347 5.862860 GCAACAGTACCAGTAGAGTAGTTTC 59.137 44.000 0.00 0.00 0.00 2.78
8596 25385 4.019174 AGCATGGTTAGCTGCTTGTTAAT 58.981 39.130 7.79 0.00 46.22 1.40
8651 25443 0.319297 AACACTGGGTAAGACGACGC 60.319 55.000 0.00 0.00 0.00 5.19
8653 25445 1.000938 ACGAACACTGGGTAAGACGAC 60.001 52.381 0.00 0.00 0.00 4.34
8669 25462 4.047059 GAGACGCCACCGGACGAA 62.047 66.667 9.46 0.00 39.22 3.85
8738 25531 3.921521 GTCCTCCGGAGATGACGT 58.078 61.111 33.39 0.00 29.59 4.34
8751 25544 2.847234 TGTGGCAACCTCCGTCCT 60.847 61.111 0.00 0.00 0.00 3.85
8752 25545 2.668550 GTGTGGCAACCTCCGTCC 60.669 66.667 0.00 0.00 0.00 4.79
8757 25550 4.980805 TCGGCGTGTGGCAACCTC 62.981 66.667 6.85 0.00 46.16 3.85
8764 25557 2.509336 GATCAGGTCGGCGTGTGG 60.509 66.667 9.82 0.00 32.77 4.17
8766 25559 2.680352 AGGATCAGGTCGGCGTGT 60.680 61.111 9.82 0.00 32.77 4.49
8767 25560 2.105128 GAGGATCAGGTCGGCGTG 59.895 66.667 6.85 2.68 33.17 5.34
8768 25561 2.043852 AGAGGATCAGGTCGGCGT 60.044 61.111 6.85 0.00 37.82 5.68
8770 25563 2.107953 GCAGAGGATCAGGTCGGC 59.892 66.667 0.00 0.00 37.82 5.54
8774 25567 1.327303 GATCGAGCAGAGGATCAGGT 58.673 55.000 0.00 0.00 39.07 4.00
8775 25568 0.240678 CGATCGAGCAGAGGATCAGG 59.759 60.000 10.26 0.00 39.16 3.86
8776 25569 1.197492 CTCGATCGAGCAGAGGATCAG 59.803 57.143 30.41 5.21 39.16 2.90
8777 25570 1.233919 CTCGATCGAGCAGAGGATCA 58.766 55.000 30.41 0.00 39.16 2.92
8787 25580 2.341543 CCATGGGGCTCGATCGAG 59.658 66.667 35.25 35.25 44.56 4.04
8788 25581 2.443952 ACCATGGGGCTCGATCGA 60.444 61.111 18.32 18.32 37.90 3.59
8789 25582 2.280389 CACCATGGGGCTCGATCG 60.280 66.667 18.09 9.36 37.90 3.69
8790 25583 2.111878 CCACCATGGGGCTCGATC 59.888 66.667 18.09 0.00 37.90 3.69
8802 25595 3.833645 CTAGCCGTAGCGCCACCA 61.834 66.667 2.29 0.00 46.67 4.17
8813 25614 3.227276 ACCGCCATCCTCTAGCCG 61.227 66.667 0.00 0.00 0.00 5.52
8817 25618 1.760875 GGTCCACCGCCATCCTCTA 60.761 63.158 0.00 0.00 0.00 2.43
8850 25651 3.823330 AAGCGCTAGGACGGTCGG 61.823 66.667 12.05 0.00 44.08 4.79
8852 25653 2.202756 CCAAGCGCTAGGACGGTC 60.203 66.667 12.05 0.00 44.08 4.79
8902 25705 1.019278 GCGAGTCGGCTGGAATCAAA 61.019 55.000 15.52 0.00 39.69 2.69
8916 25719 2.203015 AACACAACGCCTGCGAGT 60.203 55.556 19.52 12.95 42.83 4.18
8941 25779 2.080693 TCGAATTCCCCAAATCACGTG 58.919 47.619 9.94 9.94 32.61 4.49
8942 25780 2.483014 TCGAATTCCCCAAATCACGT 57.517 45.000 0.00 0.00 32.61 4.49
8943 25781 4.104776 CAAATCGAATTCCCCAAATCACG 58.895 43.478 0.00 0.00 0.00 4.35
8944 25782 5.323371 TCAAATCGAATTCCCCAAATCAC 57.677 39.130 0.00 0.00 0.00 3.06
8945 25783 5.655974 TCATCAAATCGAATTCCCCAAATCA 59.344 36.000 0.00 0.00 0.00 2.57
8946 25784 6.147864 TCATCAAATCGAATTCCCCAAATC 57.852 37.500 0.00 0.00 0.00 2.17
8991 25871 3.491652 GGAAGAGTTCGCGCTGGC 61.492 66.667 5.56 0.00 0.00 4.85
9019 25899 7.504926 TTTTCTAGGGGATTTTGCTCTAGTA 57.495 36.000 3.31 0.00 31.90 1.82
9024 25904 7.881775 TCTATTTTTCTAGGGGATTTTGCTC 57.118 36.000 0.00 0.00 0.00 4.26
9025 25905 8.116026 TCTTCTATTTTTCTAGGGGATTTTGCT 58.884 33.333 0.00 0.00 0.00 3.91
9026 25906 8.293699 TCTTCTATTTTTCTAGGGGATTTTGC 57.706 34.615 0.00 0.00 0.00 3.68
9032 25912 8.749354 GCATTTTTCTTCTATTTTTCTAGGGGA 58.251 33.333 0.00 0.00 0.00 4.81
9033 25913 8.531146 TGCATTTTTCTTCTATTTTTCTAGGGG 58.469 33.333 0.00 0.00 0.00 4.79
9046 25926 9.507329 TTCAAGAGTAGTATGCATTTTTCTTCT 57.493 29.630 3.54 2.43 0.00 2.85
9053 25933 9.507329 TTCTTCTTTCAAGAGTAGTATGCATTT 57.493 29.630 3.54 0.00 36.22 2.32
9062 25942 9.757227 TCTCTCTTTTTCTTCTTTCAAGAGTAG 57.243 33.333 7.02 4.58 40.85 2.57
9064 25944 9.054922 CATCTCTCTTTTTCTTCTTTCAAGAGT 57.945 33.333 7.02 0.00 40.85 3.24
9069 25949 7.282585 TGACCATCTCTCTTTTTCTTCTTTCA 58.717 34.615 0.00 0.00 0.00 2.69
9070 25950 7.736447 TGACCATCTCTCTTTTTCTTCTTTC 57.264 36.000 0.00 0.00 0.00 2.62
9083 25963 1.936547 GATTGGCGTTGACCATCTCTC 59.063 52.381 0.00 0.00 40.13 3.20
9085 25965 1.737838 TGATTGGCGTTGACCATCTC 58.262 50.000 0.00 0.00 40.13 2.75
9091 25971 0.247814 CGAGCATGATTGGCGTTGAC 60.248 55.000 0.00 0.00 36.08 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.