Multiple sequence alignment - TraesCS1B01G466600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G466600 chr1B 100.000 2288 0 0 1 2288 676880620 676878333 0.000000e+00 4226
1 TraesCS1B01G466600 chr1B 97.391 230 4 2 1795 2024 602074768 602074995 7.660000e-105 390
2 TraesCS1B01G466600 chr7D 93.963 1557 89 5 156 1711 621162481 621164033 0.000000e+00 2350
3 TraesCS1B01G466600 chr7D 95.706 163 6 1 1 163 1278691 1278852 6.270000e-66 261
4 TraesCS1B01G466600 chr7D 92.655 177 11 2 1 177 53360079 53359905 1.050000e-63 254
5 TraesCS1B01G466600 chr7B 93.602 1563 93 6 156 1716 457414459 457416016 0.000000e+00 2326
6 TraesCS1B01G466600 chr7B 99.099 222 2 0 1804 2025 135043971 135044192 1.270000e-107 399
7 TraesCS1B01G466600 chr7B 96.983 232 7 0 1804 2035 669205520 669205289 7.660000e-105 390
8 TraesCS1B01G466600 chr5D 93.338 1561 97 4 156 1715 353957489 353959043 0.000000e+00 2300
9 TraesCS1B01G466600 chr5D 93.143 175 10 1 1 175 543807387 543807215 2.920000e-64 255
10 TraesCS1B01G466600 chr1D 93.123 1556 103 4 156 1710 481925733 481927285 0.000000e+00 2278
11 TraesCS1B01G466600 chr2B 93.077 1560 100 7 156 1713 23892099 23890546 0.000000e+00 2276
12 TraesCS1B01G466600 chr2B 93.064 1557 102 5 156 1711 643125288 643126839 0.000000e+00 2272
13 TraesCS1B01G466600 chr2B 96.610 236 7 1 1797 2031 551636433 551636668 7.660000e-105 390
14 TraesCS1B01G466600 chr2B 96.319 163 5 1 1 163 148913849 148914010 1.350000e-67 267
15 TraesCS1B01G466600 chr3B 93.013 1560 102 7 156 1714 97752718 97751165 0.000000e+00 2270
16 TraesCS1B01G466600 chr3B 98.238 227 4 0 1797 2023 816483131 816483357 4.580000e-107 398
17 TraesCS1B01G466600 chr4D 93.064 1557 98 6 156 1710 345355007 345356555 0.000000e+00 2268
18 TraesCS1B01G466600 chr7A 92.839 1564 105 6 156 1719 86218190 86216634 0.000000e+00 2261
19 TraesCS1B01G466600 chr3A 99.545 220 1 0 1805 2024 224325190 224325409 3.540000e-108 401
20 TraesCS1B01G466600 chr2D 99.545 220 1 0 1805 2024 638883791 638884010 3.540000e-108 401
21 TraesCS1B01G466600 chr6B 98.238 227 4 0 1801 2027 73689 73463 4.580000e-107 398
22 TraesCS1B01G466600 chr6B 97.807 228 4 1 1798 2025 23231977 23231751 2.130000e-105 392
23 TraesCS1B01G466600 chr6B 93.605 172 11 0 1 172 127365727 127365898 8.110000e-65 257
24 TraesCS1B01G466600 chr3D 95.732 164 6 1 1 163 98627884 98628047 1.740000e-66 263
25 TraesCS1B01G466600 chr4B 95.706 163 5 2 1 163 77795233 77795393 6.270000e-66 261
26 TraesCS1B01G466600 chr4B 91.892 185 11 4 1 184 133628721 133628902 2.920000e-64 255
27 TraesCS1B01G466600 chr1A 95.706 163 6 1 1 163 480819321 480819160 6.270000e-66 261


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G466600 chr1B 676878333 676880620 2287 True 4226 4226 100.000 1 2288 1 chr1B.!!$R1 2287
1 TraesCS1B01G466600 chr7D 621162481 621164033 1552 False 2350 2350 93.963 156 1711 1 chr7D.!!$F2 1555
2 TraesCS1B01G466600 chr7B 457414459 457416016 1557 False 2326 2326 93.602 156 1716 1 chr7B.!!$F2 1560
3 TraesCS1B01G466600 chr5D 353957489 353959043 1554 False 2300 2300 93.338 156 1715 1 chr5D.!!$F1 1559
4 TraesCS1B01G466600 chr1D 481925733 481927285 1552 False 2278 2278 93.123 156 1710 1 chr1D.!!$F1 1554
5 TraesCS1B01G466600 chr2B 23890546 23892099 1553 True 2276 2276 93.077 156 1713 1 chr2B.!!$R1 1557
6 TraesCS1B01G466600 chr2B 643125288 643126839 1551 False 2272 2272 93.064 156 1711 1 chr2B.!!$F3 1555
7 TraesCS1B01G466600 chr3B 97751165 97752718 1553 True 2270 2270 93.013 156 1714 1 chr3B.!!$R1 1558
8 TraesCS1B01G466600 chr4D 345355007 345356555 1548 False 2268 2268 93.064 156 1710 1 chr4D.!!$F1 1554
9 TraesCS1B01G466600 chr7A 86216634 86218190 1556 True 2261 2261 92.839 156 1719 1 chr7A.!!$R1 1563

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
26 27 0.036388 CGCTAGGGACATGTTGTGGT 60.036 55.0 0.0 0.0 0.0 4.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1671 1675 0.249155 GCGCTACAGTACCCGCATTA 60.249 55.0 13.41 0.0 45.21 1.9 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.684104 AGAGGCTCGCTAGGGACA 59.316 61.111 9.22 0.00 0.00 4.02
18 19 1.231641 AGAGGCTCGCTAGGGACAT 59.768 57.895 9.22 1.05 0.00 3.06
19 20 1.112315 AGAGGCTCGCTAGGGACATG 61.112 60.000 9.22 0.00 0.00 3.21
20 21 1.381872 AGGCTCGCTAGGGACATGT 60.382 57.895 5.20 0.00 0.00 3.21
21 22 0.978146 AGGCTCGCTAGGGACATGTT 60.978 55.000 5.20 0.00 0.00 2.71
22 23 0.811616 GGCTCGCTAGGGACATGTTG 60.812 60.000 5.20 0.00 0.00 3.33
23 24 0.108138 GCTCGCTAGGGACATGTTGT 60.108 55.000 5.20 0.00 0.00 3.32
24 25 1.645034 CTCGCTAGGGACATGTTGTG 58.355 55.000 5.20 0.00 0.00 3.33
25 26 0.249120 TCGCTAGGGACATGTTGTGG 59.751 55.000 5.20 0.00 0.00 4.17
26 27 0.036388 CGCTAGGGACATGTTGTGGT 60.036 55.000 0.00 0.00 0.00 4.16
27 28 1.739067 GCTAGGGACATGTTGTGGTC 58.261 55.000 0.00 0.00 0.00 4.02
28 29 1.279271 GCTAGGGACATGTTGTGGTCT 59.721 52.381 0.00 0.00 34.49 3.85
29 30 2.500098 GCTAGGGACATGTTGTGGTCTA 59.500 50.000 0.00 0.00 34.49 2.59
30 31 3.134804 GCTAGGGACATGTTGTGGTCTAT 59.865 47.826 0.00 0.00 34.49 1.98
31 32 3.634397 AGGGACATGTTGTGGTCTATG 57.366 47.619 0.00 0.00 34.49 2.23
32 33 2.912956 AGGGACATGTTGTGGTCTATGT 59.087 45.455 0.00 0.00 36.54 2.29
33 34 4.101114 AGGGACATGTTGTGGTCTATGTA 58.899 43.478 0.00 0.00 34.18 2.29
34 35 4.721776 AGGGACATGTTGTGGTCTATGTAT 59.278 41.667 0.00 0.00 34.18 2.29
35 36 5.191722 AGGGACATGTTGTGGTCTATGTATT 59.808 40.000 0.00 0.00 34.18 1.89
36 37 5.527582 GGGACATGTTGTGGTCTATGTATTC 59.472 44.000 0.00 0.00 34.18 1.75
37 38 6.112734 GGACATGTTGTGGTCTATGTATTCA 58.887 40.000 0.00 0.00 34.18 2.57
38 39 6.037172 GGACATGTTGTGGTCTATGTATTCAC 59.963 42.308 0.00 0.00 34.18 3.18
39 40 5.580691 ACATGTTGTGGTCTATGTATTCACG 59.419 40.000 0.00 0.00 32.41 4.35
40 41 3.930229 TGTTGTGGTCTATGTATTCACGC 59.070 43.478 0.00 0.00 0.00 5.34
41 42 2.804647 TGTGGTCTATGTATTCACGCG 58.195 47.619 3.53 3.53 0.00 6.01
42 43 2.164827 TGTGGTCTATGTATTCACGCGT 59.835 45.455 5.58 5.58 0.00 6.01
43 44 2.534349 GTGGTCTATGTATTCACGCGTG 59.466 50.000 32.76 32.76 0.00 5.34
44 45 1.521423 GGTCTATGTATTCACGCGTGC 59.479 52.381 33.63 20.00 0.00 5.34
45 46 2.190161 GTCTATGTATTCACGCGTGCA 58.810 47.619 33.63 25.13 0.00 4.57
46 47 2.794910 GTCTATGTATTCACGCGTGCAT 59.205 45.455 33.63 29.85 0.00 3.96
47 48 3.245284 GTCTATGTATTCACGCGTGCATT 59.755 43.478 33.63 21.45 0.00 3.56
48 49 4.443063 GTCTATGTATTCACGCGTGCATTA 59.557 41.667 33.63 20.31 0.00 1.90
49 50 3.585748 ATGTATTCACGCGTGCATTAC 57.414 42.857 33.63 28.67 0.00 1.89
63 64 4.769215 GTGCATTACGATTTCCGGATAAC 58.231 43.478 4.15 0.00 43.93 1.89
64 65 4.271533 GTGCATTACGATTTCCGGATAACA 59.728 41.667 4.15 0.00 43.93 2.41
65 66 4.271533 TGCATTACGATTTCCGGATAACAC 59.728 41.667 4.15 0.00 43.93 3.32
66 67 4.271533 GCATTACGATTTCCGGATAACACA 59.728 41.667 4.15 0.00 43.93 3.72
67 68 5.220700 GCATTACGATTTCCGGATAACACAA 60.221 40.000 4.15 0.00 43.93 3.33
68 69 6.512741 GCATTACGATTTCCGGATAACACAAT 60.513 38.462 4.15 0.00 43.93 2.71
69 70 6.988622 TTACGATTTCCGGATAACACAATT 57.011 33.333 4.15 0.00 43.93 2.32
70 71 8.552865 CATTACGATTTCCGGATAACACAATTA 58.447 33.333 4.15 0.00 43.93 1.40
71 72 8.665643 TTACGATTTCCGGATAACACAATTAT 57.334 30.769 4.15 0.00 43.93 1.28
72 73 9.761504 TTACGATTTCCGGATAACACAATTATA 57.238 29.630 4.15 0.00 43.93 0.98
73 74 8.306680 ACGATTTCCGGATAACACAATTATAG 57.693 34.615 4.15 0.00 43.93 1.31
74 75 7.095355 ACGATTTCCGGATAACACAATTATAGC 60.095 37.037 4.15 0.00 43.93 2.97
75 76 7.095397 CGATTTCCGGATAACACAATTATAGCA 60.095 37.037 4.15 0.00 33.91 3.49
76 77 8.635765 ATTTCCGGATAACACAATTATAGCAT 57.364 30.769 4.15 0.00 0.00 3.79
77 78 7.433708 TTCCGGATAACACAATTATAGCATG 57.566 36.000 4.15 0.00 0.00 4.06
78 79 6.764379 TCCGGATAACACAATTATAGCATGA 58.236 36.000 0.00 0.00 0.00 3.07
79 80 7.220740 TCCGGATAACACAATTATAGCATGAA 58.779 34.615 0.00 0.00 0.00 2.57
80 81 7.882791 TCCGGATAACACAATTATAGCATGAAT 59.117 33.333 0.00 0.00 0.00 2.57
81 82 9.161629 CCGGATAACACAATTATAGCATGAATA 57.838 33.333 0.00 0.00 0.00 1.75
141 142 7.839680 AACCATTTTATTATTGCCTCTAGGG 57.160 36.000 0.00 0.00 35.18 3.53
154 155 4.437682 CCTCTAGGGCATATTTCCAACA 57.562 45.455 0.00 0.00 0.00 3.33
315 316 0.820891 GGCCCAGCGAATGATGTCAT 60.821 55.000 0.00 0.00 38.41 3.06
333 334 2.615227 ATCTGCCATCGCACCCTTCC 62.615 60.000 0.00 0.00 41.12 3.46
382 383 5.241403 TCTTCTTTAGTGGCCTTCATGAA 57.759 39.130 8.12 8.12 0.00 2.57
398 399 4.512484 TCATGAACACGGCATTAGATTCA 58.488 39.130 0.00 0.00 0.00 2.57
409 410 5.506815 CGGCATTAGATTCATTCTGCATGTT 60.507 40.000 0.00 0.00 35.79 2.71
411 412 6.460537 GGCATTAGATTCATTCTGCATGTTCA 60.461 38.462 0.00 0.00 35.79 3.18
493 494 0.903454 GACCACCCGAGGAAGAAGGA 60.903 60.000 0.00 0.00 0.00 3.36
539 540 1.700955 GATTGGCATTGGAGCTGGAT 58.299 50.000 0.00 0.00 34.17 3.41
553 554 1.969923 GCTGGATCTAGAGCTCATGGT 59.030 52.381 17.77 3.72 32.12 3.55
568 569 0.401105 ATGGTGATGGGGAGGAGGAG 60.401 60.000 0.00 0.00 0.00 3.69
569 570 1.314867 GGTGATGGGGAGGAGGAGA 59.685 63.158 0.00 0.00 0.00 3.71
573 574 1.062581 TGATGGGGAGGAGGAGAAGAG 60.063 57.143 0.00 0.00 0.00 2.85
575 576 0.793617 TGGGGAGGAGGAGAAGAGTT 59.206 55.000 0.00 0.00 0.00 3.01
578 579 2.023791 GGGGAGGAGGAGAAGAGTTACT 60.024 54.545 0.00 0.00 0.00 2.24
634 635 3.908103 GGGCAGGGTGAGTAAATATAGGA 59.092 47.826 0.00 0.00 0.00 2.94
649 650 0.485099 TAGGAGGGATGGAGAGGAGC 59.515 60.000 0.00 0.00 0.00 4.70
755 757 3.252701 GTGCAGATCAAGGATAGCAATGG 59.747 47.826 0.00 0.00 35.83 3.16
834 836 2.707849 GCCCGACGAGGTTGAGCTA 61.708 63.158 0.00 0.00 38.74 3.32
855 858 1.676967 GCCCACTGCCAAGGAAGAG 60.677 63.158 0.00 0.00 0.00 2.85
868 871 1.664321 GGAAGAGCCGAAGACGCCTA 61.664 60.000 0.00 0.00 38.29 3.93
913 917 3.965888 GAGCCCTCCATCAACAAGT 57.034 52.632 0.00 0.00 0.00 3.16
917 921 0.251297 CCCTCCATCAACAAGTGCCA 60.251 55.000 0.00 0.00 0.00 4.92
962 966 1.680249 GGATGGCCCAACTCACTTCTC 60.680 57.143 0.00 0.00 34.14 2.87
995 999 3.557207 CACCAAAGCTTGAGTGCAC 57.443 52.632 9.40 9.40 34.99 4.57
1026 1030 2.301346 CTGGACTTCACCAAGCACTTT 58.699 47.619 0.00 0.00 39.59 2.66
1138 1142 2.121689 AGGGTTGGGCCACCTACA 60.122 61.111 13.77 0.00 43.22 2.74
1290 1294 4.176752 GCCGCCAAGGAGTAGGGG 62.177 72.222 0.00 0.00 45.00 4.79
1310 1314 2.347490 GGCCACCTCTTTCGAGCA 59.653 61.111 0.00 0.00 35.90 4.26
1341 1345 5.473039 GAGCCTGCTTTGAACATGTTTATT 58.527 37.500 13.36 0.00 0.00 1.40
1352 1356 7.559835 TGAACATGTTTATTGTTTATGCGTG 57.440 32.000 13.36 0.00 37.43 5.34
1413 1417 7.539712 TTATGCTAGTTGATGCTCTGTTTAC 57.460 36.000 0.00 0.00 0.00 2.01
1433 1437 6.968131 TTACACTCTGTTGTGCTTATGATC 57.032 37.500 0.00 0.00 41.30 2.92
1448 1452 0.894835 TGATCTGTGCTGCCGAAGTA 59.105 50.000 0.00 0.00 0.00 2.24
1571 1575 1.306296 ACACCAGGCAGTGTGGTTT 59.694 52.632 11.91 0.00 46.73 3.27
1589 1593 4.042311 TGGTTTAGTCCATGCAGGTAAGAA 59.958 41.667 0.00 0.00 39.02 2.52
1591 1595 5.488341 GTTTAGTCCATGCAGGTAAGAAGA 58.512 41.667 0.00 0.00 39.02 2.87
1671 1675 2.039879 GGTTGGGTGGAGAAGTGTATGT 59.960 50.000 0.00 0.00 0.00 2.29
1716 1720 0.601841 ACCAAACACGCCCTTAGTCG 60.602 55.000 0.00 0.00 0.00 4.18
1717 1721 0.320073 CCAAACACGCCCTTAGTCGA 60.320 55.000 0.00 0.00 0.00 4.20
1718 1722 0.788391 CAAACACGCCCTTAGTCGAC 59.212 55.000 7.70 7.70 0.00 4.20
1719 1723 0.320160 AAACACGCCCTTAGTCGACC 60.320 55.000 13.01 0.00 0.00 4.79
1720 1724 2.202570 CACGCCCTTAGTCGACCG 60.203 66.667 13.01 10.02 0.00 4.79
1721 1725 3.446570 ACGCCCTTAGTCGACCGG 61.447 66.667 13.01 10.44 0.00 5.28
1722 1726 4.867599 CGCCCTTAGTCGACCGGC 62.868 72.222 13.01 16.54 36.21 6.13
1723 1727 3.766691 GCCCTTAGTCGACCGGCA 61.767 66.667 21.89 1.47 39.50 5.69
1724 1728 2.494918 CCCTTAGTCGACCGGCAG 59.505 66.667 13.01 2.95 0.00 4.85
1725 1729 2.050350 CCCTTAGTCGACCGGCAGA 61.050 63.158 13.01 0.00 0.00 4.26
1726 1730 1.433879 CCTTAGTCGACCGGCAGAG 59.566 63.158 13.01 1.48 0.00 3.35
1727 1731 1.226717 CTTAGTCGACCGGCAGAGC 60.227 63.158 13.01 0.00 0.00 4.09
1728 1732 2.615262 CTTAGTCGACCGGCAGAGCC 62.615 65.000 13.01 0.00 46.75 4.70
1739 1743 2.644887 GCAGAGCCATGTGGTTTCA 58.355 52.632 0.35 0.00 37.57 2.69
1740 1744 1.180029 GCAGAGCCATGTGGTTTCAT 58.820 50.000 0.35 0.00 37.57 2.57
1741 1745 1.133790 GCAGAGCCATGTGGTTTCATC 59.866 52.381 0.35 0.00 37.57 2.92
1742 1746 2.439409 CAGAGCCATGTGGTTTCATCA 58.561 47.619 0.35 0.00 37.57 3.07
1743 1747 2.163010 CAGAGCCATGTGGTTTCATCAC 59.837 50.000 0.35 0.00 37.57 3.06
1744 1748 1.131126 GAGCCATGTGGTTTCATCACG 59.869 52.381 0.35 0.00 37.91 4.35
1745 1749 1.164411 GCCATGTGGTTTCATCACGA 58.836 50.000 0.35 0.00 37.91 4.35
1746 1750 1.745087 GCCATGTGGTTTCATCACGAT 59.255 47.619 0.35 0.00 37.91 3.73
1747 1751 2.478370 GCCATGTGGTTTCATCACGATG 60.478 50.000 0.33 0.33 37.91 3.84
1748 1752 3.009026 CCATGTGGTTTCATCACGATGA 58.991 45.455 5.62 5.62 45.30 2.92
1749 1753 3.181507 CCATGTGGTTTCATCACGATGAC 60.182 47.826 9.23 0.29 46.49 3.06
1750 1754 3.401033 TGTGGTTTCATCACGATGACT 57.599 42.857 9.23 0.00 46.49 3.41
1751 1755 3.738982 TGTGGTTTCATCACGATGACTT 58.261 40.909 9.23 0.00 46.49 3.01
1752 1756 3.745975 TGTGGTTTCATCACGATGACTTC 59.254 43.478 9.23 3.65 46.49 3.01
1753 1757 3.745975 GTGGTTTCATCACGATGACTTCA 59.254 43.478 9.23 5.50 46.49 3.02
1754 1758 4.393062 GTGGTTTCATCACGATGACTTCAT 59.607 41.667 9.23 0.00 46.49 2.57
1755 1759 4.392754 TGGTTTCATCACGATGACTTCATG 59.607 41.667 9.23 0.00 46.49 3.07
1756 1760 4.631377 GGTTTCATCACGATGACTTCATGA 59.369 41.667 9.23 0.00 46.49 3.07
1757 1761 5.122239 GGTTTCATCACGATGACTTCATGAA 59.878 40.000 9.23 8.12 46.49 2.57
1758 1762 6.183360 GGTTTCATCACGATGACTTCATGAAT 60.183 38.462 8.96 0.00 46.49 2.57
1759 1763 5.978934 TCATCACGATGACTTCATGAATG 57.021 39.130 8.96 6.02 42.42 2.67
1760 1764 5.422145 TCATCACGATGACTTCATGAATGT 58.578 37.500 8.96 9.24 42.42 2.71
1761 1765 5.292589 TCATCACGATGACTTCATGAATGTG 59.707 40.000 8.96 10.68 42.42 3.21
1762 1766 4.568956 TCACGATGACTTCATGAATGTGT 58.431 39.130 8.96 3.37 36.57 3.72
1763 1767 4.996758 TCACGATGACTTCATGAATGTGTT 59.003 37.500 8.96 0.00 36.57 3.32
1764 1768 5.120674 TCACGATGACTTCATGAATGTGTTC 59.879 40.000 8.96 7.41 36.57 3.18
1765 1769 5.121298 CACGATGACTTCATGAATGTGTTCT 59.879 40.000 8.96 0.00 36.57 3.01
1766 1770 5.702670 ACGATGACTTCATGAATGTGTTCTT 59.297 36.000 8.96 0.00 36.57 2.52
1767 1771 6.205464 ACGATGACTTCATGAATGTGTTCTTT 59.795 34.615 8.96 0.00 36.57 2.52
1768 1772 6.740002 CGATGACTTCATGAATGTGTTCTTTC 59.260 38.462 8.96 0.23 36.57 2.62
1769 1773 7.360691 CGATGACTTCATGAATGTGTTCTTTCT 60.361 37.037 8.96 0.00 36.57 2.52
1770 1774 7.572523 TGACTTCATGAATGTGTTCTTTCTT 57.427 32.000 8.96 0.00 35.33 2.52
1771 1775 7.999679 TGACTTCATGAATGTGTTCTTTCTTT 58.000 30.769 8.96 0.00 35.33 2.52
1772 1776 8.131100 TGACTTCATGAATGTGTTCTTTCTTTC 58.869 33.333 8.96 0.00 35.33 2.62
1773 1777 8.230472 ACTTCATGAATGTGTTCTTTCTTTCT 57.770 30.769 8.96 0.00 35.33 2.52
1774 1778 8.689972 ACTTCATGAATGTGTTCTTTCTTTCTT 58.310 29.630 8.96 0.00 35.33 2.52
1775 1779 9.525409 CTTCATGAATGTGTTCTTTCTTTCTTT 57.475 29.630 8.96 0.00 35.33 2.52
1776 1780 9.874205 TTCATGAATGTGTTCTTTCTTTCTTTT 57.126 25.926 3.38 0.00 35.33 2.27
1777 1781 9.874205 TCATGAATGTGTTCTTTCTTTCTTTTT 57.126 25.926 0.00 0.00 35.33 1.94
1779 1783 9.874205 ATGAATGTGTTCTTTCTTTCTTTTTCA 57.126 25.926 0.00 0.00 35.33 2.69
1780 1784 9.139174 TGAATGTGTTCTTTCTTTCTTTTTCAC 57.861 29.630 0.00 0.00 35.33 3.18
1781 1785 8.479313 AATGTGTTCTTTCTTTCTTTTTCACC 57.521 30.769 0.00 0.00 0.00 4.02
1782 1786 7.227049 TGTGTTCTTTCTTTCTTTTTCACCT 57.773 32.000 0.00 0.00 0.00 4.00
1783 1787 7.666623 TGTGTTCTTTCTTTCTTTTTCACCTT 58.333 30.769 0.00 0.00 0.00 3.50
1784 1788 8.147704 TGTGTTCTTTCTTTCTTTTTCACCTTT 58.852 29.630 0.00 0.00 0.00 3.11
1785 1789 8.435430 GTGTTCTTTCTTTCTTTTTCACCTTTG 58.565 33.333 0.00 0.00 0.00 2.77
1786 1790 8.147704 TGTTCTTTCTTTCTTTTTCACCTTTGT 58.852 29.630 0.00 0.00 0.00 2.83
1787 1791 8.988934 GTTCTTTCTTTCTTTTTCACCTTTGTT 58.011 29.630 0.00 0.00 0.00 2.83
1788 1792 9.554395 TTCTTTCTTTCTTTTTCACCTTTGTTT 57.446 25.926 0.00 0.00 0.00 2.83
1803 1807 9.255304 TCACCTTTGTTTATATTTGAAAAGTGC 57.745 29.630 0.00 0.00 0.00 4.40
1804 1808 9.260002 CACCTTTGTTTATATTTGAAAAGTGCT 57.740 29.630 0.00 0.00 0.00 4.40
1813 1817 9.609346 TTATATTTGAAAAGTGCTACTACCTCC 57.391 33.333 0.00 0.00 0.00 4.30
1814 1818 3.587797 TGAAAAGTGCTACTACCTCCG 57.412 47.619 0.00 0.00 0.00 4.63
1815 1819 2.895404 TGAAAAGTGCTACTACCTCCGT 59.105 45.455 0.00 0.00 0.00 4.69
1816 1820 3.057033 TGAAAAGTGCTACTACCTCCGTC 60.057 47.826 0.00 0.00 0.00 4.79
1817 1821 1.472188 AAGTGCTACTACCTCCGTCC 58.528 55.000 0.00 0.00 0.00 4.79
1818 1822 0.395448 AGTGCTACTACCTCCGTCCC 60.395 60.000 0.00 0.00 0.00 4.46
1819 1823 1.452651 TGCTACTACCTCCGTCCCG 60.453 63.158 0.00 0.00 0.00 5.14
1830 1834 3.953201 CCGTCCCGGTGTATAAGTC 57.047 57.895 0.00 0.00 42.73 3.01
1831 1835 1.105457 CCGTCCCGGTGTATAAGTCA 58.895 55.000 0.00 0.00 42.73 3.41
1832 1836 1.684983 CCGTCCCGGTGTATAAGTCAT 59.315 52.381 0.00 0.00 42.73 3.06
1833 1837 2.101917 CCGTCCCGGTGTATAAGTCATT 59.898 50.000 0.00 0.00 42.73 2.57
1834 1838 3.378339 CGTCCCGGTGTATAAGTCATTC 58.622 50.000 0.00 0.00 0.00 2.67
1835 1839 3.378339 GTCCCGGTGTATAAGTCATTCG 58.622 50.000 0.00 0.00 0.00 3.34
1836 1840 2.132762 CCCGGTGTATAAGTCATTCGC 58.867 52.381 0.00 0.00 0.00 4.70
1837 1841 1.784856 CCGGTGTATAAGTCATTCGCG 59.215 52.381 0.00 0.00 0.00 5.87
1838 1842 2.456989 CGGTGTATAAGTCATTCGCGT 58.543 47.619 5.77 0.00 0.00 6.01
1839 1843 3.548616 CCGGTGTATAAGTCATTCGCGTA 60.549 47.826 5.77 0.00 0.00 4.42
1840 1844 3.662645 CGGTGTATAAGTCATTCGCGTAG 59.337 47.826 5.77 0.00 0.00 3.51
1841 1845 4.604976 GGTGTATAAGTCATTCGCGTAGT 58.395 43.478 5.77 0.00 0.00 2.73
1842 1846 5.039333 GGTGTATAAGTCATTCGCGTAGTT 58.961 41.667 5.77 2.59 0.00 2.24
1843 1847 5.172771 GGTGTATAAGTCATTCGCGTAGTTC 59.827 44.000 5.77 0.00 0.00 3.01
1844 1848 5.970023 GTGTATAAGTCATTCGCGTAGTTCT 59.030 40.000 5.77 0.00 0.00 3.01
1845 1849 7.128331 GTGTATAAGTCATTCGCGTAGTTCTA 58.872 38.462 5.77 0.00 0.00 2.10
1846 1850 7.320797 GTGTATAAGTCATTCGCGTAGTTCTAG 59.679 40.741 5.77 0.00 0.00 2.43
1847 1851 3.694535 AGTCATTCGCGTAGTTCTAGG 57.305 47.619 5.77 0.00 0.00 3.02
1848 1852 3.015327 AGTCATTCGCGTAGTTCTAGGT 58.985 45.455 5.77 0.00 0.00 3.08
1849 1853 3.065095 AGTCATTCGCGTAGTTCTAGGTC 59.935 47.826 5.77 0.00 0.00 3.85
1850 1854 2.031314 TCATTCGCGTAGTTCTAGGTCG 59.969 50.000 5.77 5.99 0.00 4.79
1851 1855 1.725641 TTCGCGTAGTTCTAGGTCGA 58.274 50.000 5.77 11.56 0.00 4.20
1852 1856 1.945387 TCGCGTAGTTCTAGGTCGAT 58.055 50.000 5.77 0.00 0.00 3.59
1853 1857 3.097877 TCGCGTAGTTCTAGGTCGATA 57.902 47.619 5.77 0.00 0.00 2.92
1854 1858 3.457234 TCGCGTAGTTCTAGGTCGATAA 58.543 45.455 5.77 0.00 0.00 1.75
1855 1859 4.060900 TCGCGTAGTTCTAGGTCGATAAT 58.939 43.478 5.77 0.00 0.00 1.28
1856 1860 4.512944 TCGCGTAGTTCTAGGTCGATAATT 59.487 41.667 5.77 0.00 0.00 1.40
1857 1861 5.008019 TCGCGTAGTTCTAGGTCGATAATTT 59.992 40.000 5.77 0.00 0.00 1.82
1858 1862 6.202762 TCGCGTAGTTCTAGGTCGATAATTTA 59.797 38.462 5.77 0.00 0.00 1.40
1859 1863 6.852853 CGCGTAGTTCTAGGTCGATAATTTAA 59.147 38.462 0.00 0.00 0.00 1.52
1860 1864 7.149224 CGCGTAGTTCTAGGTCGATAATTTAAC 60.149 40.741 0.00 0.00 0.00 2.01
1861 1865 7.859875 GCGTAGTTCTAGGTCGATAATTTAACT 59.140 37.037 0.00 0.00 0.00 2.24
1931 1935 2.253610 TCCGTGTGGAAATCTAGTGGT 58.746 47.619 0.00 0.00 42.85 4.16
1932 1936 3.433343 TCCGTGTGGAAATCTAGTGGTA 58.567 45.455 0.00 0.00 42.85 3.25
1933 1937 4.028131 TCCGTGTGGAAATCTAGTGGTAT 58.972 43.478 0.00 0.00 42.85 2.73
1934 1938 5.202765 TCCGTGTGGAAATCTAGTGGTATA 58.797 41.667 0.00 0.00 42.85 1.47
1935 1939 5.068198 TCCGTGTGGAAATCTAGTGGTATAC 59.932 44.000 0.00 0.00 42.85 1.47
1936 1940 5.068723 CCGTGTGGAAATCTAGTGGTATACT 59.931 44.000 2.25 0.00 39.66 2.12
1937 1941 6.406624 CCGTGTGGAAATCTAGTGGTATACTT 60.407 42.308 2.25 0.00 37.99 2.24
1938 1942 7.039882 CGTGTGGAAATCTAGTGGTATACTTT 58.960 38.462 2.25 0.00 40.89 2.66
1939 1943 7.548075 CGTGTGGAAATCTAGTGGTATACTTTT 59.452 37.037 2.25 0.00 40.89 2.27
1940 1944 8.880750 GTGTGGAAATCTAGTGGTATACTTTTC 58.119 37.037 2.25 0.00 40.89 2.29
1941 1945 8.598916 TGTGGAAATCTAGTGGTATACTTTTCA 58.401 33.333 2.25 0.00 40.89 2.69
1942 1946 9.614792 GTGGAAATCTAGTGGTATACTTTTCAT 57.385 33.333 2.25 0.00 40.89 2.57
1943 1947 9.613428 TGGAAATCTAGTGGTATACTTTTCATG 57.387 33.333 2.25 0.00 40.89 3.07
1944 1948 9.832445 GGAAATCTAGTGGTATACTTTTCATGA 57.168 33.333 2.25 0.00 40.89 3.07
1986 1990 8.664211 AATTCCTTAAATCGATGACCTAGAAC 57.336 34.615 0.00 0.00 0.00 3.01
1987 1991 7.419711 TTCCTTAAATCGATGACCTAGAACT 57.580 36.000 0.00 0.00 0.00 3.01
1988 1992 8.529424 TTCCTTAAATCGATGACCTAGAACTA 57.471 34.615 0.00 0.00 0.00 2.24
1989 1993 7.938715 TCCTTAAATCGATGACCTAGAACTAC 58.061 38.462 0.00 0.00 0.00 2.73
1990 1994 6.856938 CCTTAAATCGATGACCTAGAACTACG 59.143 42.308 0.00 0.00 0.00 3.51
1991 1995 3.900388 ATCGATGACCTAGAACTACGC 57.100 47.619 0.00 0.00 0.00 4.42
1992 1996 1.596260 TCGATGACCTAGAACTACGCG 59.404 52.381 3.53 3.53 0.00 6.01
1993 1997 1.596260 CGATGACCTAGAACTACGCGA 59.404 52.381 15.93 0.00 0.00 5.87
1994 1998 2.031314 CGATGACCTAGAACTACGCGAA 59.969 50.000 15.93 0.00 0.00 4.70
1995 1999 3.303857 CGATGACCTAGAACTACGCGAAT 60.304 47.826 15.93 0.00 0.00 3.34
1996 2000 3.416119 TGACCTAGAACTACGCGAATG 57.584 47.619 15.93 4.47 0.00 2.67
1997 2001 3.011818 TGACCTAGAACTACGCGAATGA 58.988 45.455 15.93 0.00 0.00 2.57
1998 2002 3.181503 TGACCTAGAACTACGCGAATGAC 60.182 47.826 15.93 0.66 0.00 3.06
1999 2003 3.015327 ACCTAGAACTACGCGAATGACT 58.985 45.455 15.93 9.07 0.00 3.41
2000 2004 3.442977 ACCTAGAACTACGCGAATGACTT 59.557 43.478 15.93 0.00 0.00 3.01
2001 2005 4.637534 ACCTAGAACTACGCGAATGACTTA 59.362 41.667 15.93 0.00 0.00 2.24
2002 2006 5.298777 ACCTAGAACTACGCGAATGACTTAT 59.701 40.000 15.93 0.00 0.00 1.73
2003 2007 6.484643 ACCTAGAACTACGCGAATGACTTATA 59.515 38.462 15.93 0.00 0.00 0.98
2004 2008 6.796072 CCTAGAACTACGCGAATGACTTATAC 59.204 42.308 15.93 0.00 0.00 1.47
2005 2009 6.127810 AGAACTACGCGAATGACTTATACA 57.872 37.500 15.93 0.00 0.00 2.29
2006 2010 5.970023 AGAACTACGCGAATGACTTATACAC 59.030 40.000 15.93 0.00 0.00 2.90
2007 2011 4.604976 ACTACGCGAATGACTTATACACC 58.395 43.478 15.93 0.00 0.00 4.16
2008 2012 2.817901 ACGCGAATGACTTATACACCC 58.182 47.619 15.93 0.00 0.00 4.61
2009 2013 1.784856 CGCGAATGACTTATACACCCG 59.215 52.381 0.00 0.00 0.00 5.28
2010 2014 2.132762 GCGAATGACTTATACACCCGG 58.867 52.381 0.00 0.00 0.00 5.73
2011 2015 2.223876 GCGAATGACTTATACACCCGGA 60.224 50.000 0.73 0.00 0.00 5.14
2012 2016 3.378339 CGAATGACTTATACACCCGGAC 58.622 50.000 0.73 0.00 0.00 4.79
2013 2017 3.181484 CGAATGACTTATACACCCGGACA 60.181 47.826 0.73 0.00 0.00 4.02
2014 2018 4.369182 GAATGACTTATACACCCGGACAG 58.631 47.826 0.73 0.00 0.00 3.51
2015 2019 3.090210 TGACTTATACACCCGGACAGA 57.910 47.619 0.73 0.00 0.00 3.41
2016 2020 3.021695 TGACTTATACACCCGGACAGAG 58.978 50.000 0.73 0.00 0.00 3.35
2017 2021 2.361438 GACTTATACACCCGGACAGAGG 59.639 54.545 0.73 0.00 0.00 3.69
2024 2028 3.936535 CCGGACAGAGGGAGTACC 58.063 66.667 0.00 0.00 40.67 3.34
2037 2041 2.258109 GGAGTACCTCCTTTCCAGTGT 58.742 52.381 2.98 0.00 46.41 3.55
2038 2042 3.438183 GGAGTACCTCCTTTCCAGTGTA 58.562 50.000 2.98 0.00 46.41 2.90
2039 2043 4.031611 GGAGTACCTCCTTTCCAGTGTAT 58.968 47.826 2.98 0.00 46.41 2.29
2040 2044 5.206587 GGAGTACCTCCTTTCCAGTGTATA 58.793 45.833 2.98 0.00 46.41 1.47
2041 2045 5.659971 GGAGTACCTCCTTTCCAGTGTATAA 59.340 44.000 2.98 0.00 46.41 0.98
2042 2046 6.183360 GGAGTACCTCCTTTCCAGTGTATAAG 60.183 46.154 2.98 0.00 46.41 1.73
2043 2047 5.661759 AGTACCTCCTTTCCAGTGTATAAGG 59.338 44.000 8.23 8.23 38.78 2.69
2044 2048 4.436079 ACCTCCTTTCCAGTGTATAAGGT 58.564 43.478 12.32 4.83 38.59 3.50
2045 2049 4.850386 ACCTCCTTTCCAGTGTATAAGGTT 59.150 41.667 12.32 0.86 38.59 3.50
2046 2050 5.312443 ACCTCCTTTCCAGTGTATAAGGTTT 59.688 40.000 12.32 0.61 38.59 3.27
2047 2051 5.648092 CCTCCTTTCCAGTGTATAAGGTTTG 59.352 44.000 12.32 6.74 38.59 2.93
2048 2052 5.007682 TCCTTTCCAGTGTATAAGGTTTGC 58.992 41.667 12.32 0.00 38.59 3.68
2049 2053 4.764823 CCTTTCCAGTGTATAAGGTTTGCA 59.235 41.667 6.89 0.00 33.93 4.08
2050 2054 5.418840 CCTTTCCAGTGTATAAGGTTTGCAT 59.581 40.000 0.00 0.00 33.93 3.96
2051 2055 5.895636 TTCCAGTGTATAAGGTTTGCATG 57.104 39.130 0.00 0.00 0.00 4.06
2052 2056 4.269183 TCCAGTGTATAAGGTTTGCATGG 58.731 43.478 0.00 0.00 0.00 3.66
2053 2057 4.018870 TCCAGTGTATAAGGTTTGCATGGA 60.019 41.667 0.00 0.00 0.00 3.41
2054 2058 4.889409 CCAGTGTATAAGGTTTGCATGGAT 59.111 41.667 0.00 0.00 0.00 3.41
2055 2059 6.061441 CCAGTGTATAAGGTTTGCATGGATA 58.939 40.000 0.00 0.00 0.00 2.59
2056 2060 6.716628 CCAGTGTATAAGGTTTGCATGGATAT 59.283 38.462 0.00 0.00 0.00 1.63
2057 2061 7.094634 CCAGTGTATAAGGTTTGCATGGATATC 60.095 40.741 0.00 0.00 0.00 1.63
2058 2062 7.663081 CAGTGTATAAGGTTTGCATGGATATCT 59.337 37.037 2.05 0.00 0.00 1.98
2059 2063 8.880244 AGTGTATAAGGTTTGCATGGATATCTA 58.120 33.333 2.05 0.00 0.00 1.98
2060 2064 9.155975 GTGTATAAGGTTTGCATGGATATCTAG 57.844 37.037 2.05 0.00 0.00 2.43
2061 2065 8.321353 TGTATAAGGTTTGCATGGATATCTAGG 58.679 37.037 2.05 0.00 0.00 3.02
2062 2066 5.653255 AAGGTTTGCATGGATATCTAGGT 57.347 39.130 2.05 0.00 0.00 3.08
2063 2067 5.653255 AGGTTTGCATGGATATCTAGGTT 57.347 39.130 2.05 0.00 0.00 3.50
2064 2068 5.380043 AGGTTTGCATGGATATCTAGGTTG 58.620 41.667 2.05 0.00 0.00 3.77
2065 2069 5.132648 AGGTTTGCATGGATATCTAGGTTGA 59.867 40.000 2.05 0.00 0.00 3.18
2066 2070 5.239525 GGTTTGCATGGATATCTAGGTTGAC 59.760 44.000 2.05 0.00 0.00 3.18
2067 2071 5.628797 TTGCATGGATATCTAGGTTGACA 57.371 39.130 2.05 0.00 0.00 3.58
2068 2072 5.628797 TGCATGGATATCTAGGTTGACAA 57.371 39.130 2.05 0.00 0.00 3.18
2069 2073 5.368145 TGCATGGATATCTAGGTTGACAAC 58.632 41.667 9.97 9.97 0.00 3.32
2070 2074 5.104569 TGCATGGATATCTAGGTTGACAACA 60.105 40.000 19.58 0.00 0.00 3.33
2071 2075 5.237344 GCATGGATATCTAGGTTGACAACAC 59.763 44.000 19.58 9.27 0.00 3.32
2072 2076 5.353394 TGGATATCTAGGTTGACAACACC 57.647 43.478 19.58 4.39 0.00 4.16
2073 2077 4.780554 TGGATATCTAGGTTGACAACACCA 59.219 41.667 19.58 11.42 0.00 4.17
2074 2078 5.249622 TGGATATCTAGGTTGACAACACCAA 59.750 40.000 19.58 3.27 0.00 3.67
2075 2079 5.585047 GGATATCTAGGTTGACAACACCAAC 59.415 44.000 19.58 2.28 42.18 3.77
2076 2080 2.828877 TCTAGGTTGACAACACCAACG 58.171 47.619 19.58 2.53 43.42 4.10
2077 2081 2.168936 TCTAGGTTGACAACACCAACGT 59.831 45.455 19.58 0.00 43.42 3.99
2078 2082 2.695127 AGGTTGACAACACCAACGTA 57.305 45.000 19.58 0.00 43.42 3.57
2079 2083 2.988570 AGGTTGACAACACCAACGTAA 58.011 42.857 19.58 0.00 43.42 3.18
2080 2084 3.547746 AGGTTGACAACACCAACGTAAT 58.452 40.909 19.58 0.00 43.42 1.89
2081 2085 4.706035 AGGTTGACAACACCAACGTAATA 58.294 39.130 19.58 0.00 43.42 0.98
2082 2086 4.512571 AGGTTGACAACACCAACGTAATAC 59.487 41.667 19.58 0.00 43.42 1.89
2083 2087 4.272991 GGTTGACAACACCAACGTAATACA 59.727 41.667 19.58 0.00 43.42 2.29
2084 2088 5.220815 GGTTGACAACACCAACGTAATACAA 60.221 40.000 19.58 0.00 43.42 2.41
2085 2089 5.660629 TGACAACACCAACGTAATACAAG 57.339 39.130 0.00 0.00 0.00 3.16
2086 2090 5.117584 TGACAACACCAACGTAATACAAGT 58.882 37.500 0.00 0.00 0.00 3.16
2087 2091 5.585445 TGACAACACCAACGTAATACAAGTT 59.415 36.000 0.00 0.00 0.00 2.66
2088 2092 6.760298 TGACAACACCAACGTAATACAAGTTA 59.240 34.615 0.00 0.00 0.00 2.24
2089 2093 7.441760 TGACAACACCAACGTAATACAAGTTAT 59.558 33.333 0.00 0.00 0.00 1.89
2090 2094 8.830201 ACAACACCAACGTAATACAAGTTATA 57.170 30.769 0.00 0.00 0.00 0.98
2091 2095 9.439500 ACAACACCAACGTAATACAAGTTATAT 57.561 29.630 0.00 0.00 0.00 0.86
2138 2142 9.683069 ATCATTAGAAATTTCAAATCGTATGCC 57.317 29.630 19.99 0.00 0.00 4.40
2139 2143 8.902806 TCATTAGAAATTTCAAATCGTATGCCT 58.097 29.630 19.99 0.00 0.00 4.75
2140 2144 9.520204 CATTAGAAATTTCAAATCGTATGCCTT 57.480 29.630 19.99 0.00 0.00 4.35
2141 2145 9.736023 ATTAGAAATTTCAAATCGTATGCCTTC 57.264 29.630 19.99 0.00 0.00 3.46
2142 2146 7.396540 AGAAATTTCAAATCGTATGCCTTCT 57.603 32.000 19.99 0.00 0.00 2.85
2143 2147 8.506168 AGAAATTTCAAATCGTATGCCTTCTA 57.494 30.769 19.99 0.00 0.00 2.10
2144 2148 8.956426 AGAAATTTCAAATCGTATGCCTTCTAA 58.044 29.630 19.99 0.00 0.00 2.10
2145 2149 8.911247 AAATTTCAAATCGTATGCCTTCTAAC 57.089 30.769 0.00 0.00 0.00 2.34
2146 2150 6.431198 TTTCAAATCGTATGCCTTCTAACC 57.569 37.500 0.00 0.00 0.00 2.85
2147 2151 4.116961 TCAAATCGTATGCCTTCTAACCG 58.883 43.478 0.00 0.00 0.00 4.44
2148 2152 3.814005 AATCGTATGCCTTCTAACCGT 57.186 42.857 0.00 0.00 0.00 4.83
2149 2153 4.924305 AATCGTATGCCTTCTAACCGTA 57.076 40.909 0.00 0.00 0.00 4.02
2150 2154 5.464030 AATCGTATGCCTTCTAACCGTAT 57.536 39.130 0.00 0.00 0.00 3.06
2151 2155 6.579666 AATCGTATGCCTTCTAACCGTATA 57.420 37.500 0.00 0.00 0.00 1.47
2152 2156 6.579666 ATCGTATGCCTTCTAACCGTATAA 57.420 37.500 0.00 0.00 0.00 0.98
2153 2157 6.579666 TCGTATGCCTTCTAACCGTATAAT 57.420 37.500 0.00 0.00 0.00 1.28
2154 2158 6.985117 TCGTATGCCTTCTAACCGTATAATT 58.015 36.000 0.00 0.00 0.00 1.40
2155 2159 7.436118 TCGTATGCCTTCTAACCGTATAATTT 58.564 34.615 0.00 0.00 0.00 1.82
2156 2160 7.927629 TCGTATGCCTTCTAACCGTATAATTTT 59.072 33.333 0.00 0.00 0.00 1.82
2157 2161 8.553696 CGTATGCCTTCTAACCGTATAATTTTT 58.446 33.333 0.00 0.00 0.00 1.94
2180 2184 9.695526 TTTTATACTGTACAACTCAACATACGT 57.304 29.630 0.00 0.00 0.00 3.57
2181 2185 8.900511 TTATACTGTACAACTCAACATACGTC 57.099 34.615 0.00 0.00 0.00 4.34
2182 2186 4.224433 ACTGTACAACTCAACATACGTCG 58.776 43.478 0.00 0.00 0.00 5.12
2183 2187 3.567530 TGTACAACTCAACATACGTCGG 58.432 45.455 0.00 0.00 0.00 4.79
2184 2188 2.806608 ACAACTCAACATACGTCGGT 57.193 45.000 0.00 0.00 0.00 4.69
2185 2189 2.669364 ACAACTCAACATACGTCGGTC 58.331 47.619 0.00 0.00 0.00 4.79
2186 2190 2.034939 ACAACTCAACATACGTCGGTCA 59.965 45.455 0.00 0.00 0.00 4.02
2187 2191 3.054166 CAACTCAACATACGTCGGTCAA 58.946 45.455 0.00 0.00 0.00 3.18
2188 2192 3.374220 ACTCAACATACGTCGGTCAAA 57.626 42.857 0.00 0.00 0.00 2.69
2189 2193 3.054878 ACTCAACATACGTCGGTCAAAC 58.945 45.455 0.00 0.00 0.00 2.93
2190 2194 3.243636 ACTCAACATACGTCGGTCAAACT 60.244 43.478 0.00 0.00 0.00 2.66
2191 2195 4.022935 ACTCAACATACGTCGGTCAAACTA 60.023 41.667 0.00 0.00 0.00 2.24
2192 2196 5.063180 TCAACATACGTCGGTCAAACTAT 57.937 39.130 0.00 0.00 0.00 2.12
2193 2197 4.860352 TCAACATACGTCGGTCAAACTATG 59.140 41.667 0.00 0.00 0.00 2.23
2194 2198 3.777478 ACATACGTCGGTCAAACTATGG 58.223 45.455 0.00 0.00 0.00 2.74
2195 2199 3.444742 ACATACGTCGGTCAAACTATGGA 59.555 43.478 0.00 0.00 0.00 3.41
2196 2200 4.098960 ACATACGTCGGTCAAACTATGGAT 59.901 41.667 0.00 0.00 0.00 3.41
2197 2201 3.160777 ACGTCGGTCAAACTATGGATC 57.839 47.619 0.00 0.00 0.00 3.36
2198 2202 2.758979 ACGTCGGTCAAACTATGGATCT 59.241 45.455 0.00 0.00 0.00 2.75
2199 2203 3.949754 ACGTCGGTCAAACTATGGATCTA 59.050 43.478 0.00 0.00 0.00 1.98
2200 2204 4.036498 ACGTCGGTCAAACTATGGATCTAG 59.964 45.833 0.00 0.00 0.00 2.43
2201 2205 4.275196 CGTCGGTCAAACTATGGATCTAGA 59.725 45.833 0.00 0.00 0.00 2.43
2202 2206 5.561145 CGTCGGTCAAACTATGGATCTAGAG 60.561 48.000 0.00 0.00 0.00 2.43
2203 2207 5.531659 GTCGGTCAAACTATGGATCTAGAGA 59.468 44.000 7.80 0.00 0.00 3.10
2204 2208 6.207810 GTCGGTCAAACTATGGATCTAGAGAT 59.792 42.308 7.80 0.00 37.51 2.75
2205 2209 7.390996 GTCGGTCAAACTATGGATCTAGAGATA 59.609 40.741 7.80 0.00 34.37 1.98
2206 2210 7.390996 TCGGTCAAACTATGGATCTAGAGATAC 59.609 40.741 7.80 0.00 35.92 2.24
2207 2211 7.531716 GGTCAAACTATGGATCTAGAGATACG 58.468 42.308 7.80 0.00 38.23 3.06
2208 2212 7.024768 GTCAAACTATGGATCTAGAGATACGC 58.975 42.308 7.80 0.00 38.23 4.42
2209 2213 5.804692 AACTATGGATCTAGAGATACGCG 57.195 43.478 7.80 3.53 38.23 6.01
2210 2214 3.623960 ACTATGGATCTAGAGATACGCGC 59.376 47.826 5.73 0.00 38.23 6.86
2211 2215 1.892209 TGGATCTAGAGATACGCGCA 58.108 50.000 5.73 0.00 38.23 6.09
2212 2216 2.227194 TGGATCTAGAGATACGCGCAA 58.773 47.619 5.73 0.00 38.23 4.85
2213 2217 2.226674 TGGATCTAGAGATACGCGCAAG 59.773 50.000 5.73 0.00 38.23 4.01
2214 2218 2.484651 GGATCTAGAGATACGCGCAAGA 59.515 50.000 5.73 0.00 34.99 3.02
2215 2219 3.484683 GATCTAGAGATACGCGCAAGAC 58.515 50.000 5.73 0.00 34.99 3.01
2216 2220 2.562635 TCTAGAGATACGCGCAAGACT 58.437 47.619 5.73 3.27 43.02 3.24
2217 2221 2.943690 TCTAGAGATACGCGCAAGACTT 59.056 45.455 5.73 0.00 43.02 3.01
2218 2222 4.124970 TCTAGAGATACGCGCAAGACTTA 58.875 43.478 5.73 0.00 43.02 2.24
2219 2223 3.067721 AGAGATACGCGCAAGACTTAC 57.932 47.619 5.73 0.00 43.02 2.34
2220 2224 2.422479 AGAGATACGCGCAAGACTTACA 59.578 45.455 5.73 0.00 43.02 2.41
2221 2225 3.119602 AGAGATACGCGCAAGACTTACAA 60.120 43.478 5.73 0.00 43.02 2.41
2222 2226 3.581755 AGATACGCGCAAGACTTACAAA 58.418 40.909 5.73 0.00 43.02 2.83
2223 2227 3.367025 AGATACGCGCAAGACTTACAAAC 59.633 43.478 5.73 0.00 43.02 2.93
2224 2228 0.584876 ACGCGCAAGACTTACAAACC 59.415 50.000 5.73 0.00 43.02 3.27
2225 2229 0.584396 CGCGCAAGACTTACAAACCA 59.416 50.000 8.75 0.00 43.02 3.67
2226 2230 1.398451 CGCGCAAGACTTACAAACCAG 60.398 52.381 8.75 0.00 43.02 4.00
2227 2231 1.871039 GCGCAAGACTTACAAACCAGA 59.129 47.619 0.30 0.00 43.02 3.86
2228 2232 2.289547 GCGCAAGACTTACAAACCAGAA 59.710 45.455 0.30 0.00 43.02 3.02
2229 2233 3.242936 GCGCAAGACTTACAAACCAGAAA 60.243 43.478 0.30 0.00 43.02 2.52
2230 2234 4.527564 CGCAAGACTTACAAACCAGAAAG 58.472 43.478 0.00 0.00 43.02 2.62
2231 2235 4.554723 CGCAAGACTTACAAACCAGAAAGG 60.555 45.833 0.00 0.00 42.40 3.11
2232 2236 4.578928 GCAAGACTTACAAACCAGAAAGGA 59.421 41.667 0.00 0.00 41.22 3.36
2233 2237 5.278022 GCAAGACTTACAAACCAGAAAGGAG 60.278 44.000 0.00 0.00 41.22 3.69
2234 2238 4.974399 AGACTTACAAACCAGAAAGGAGG 58.026 43.478 0.00 0.00 41.22 4.30
2235 2239 4.412528 AGACTTACAAACCAGAAAGGAGGT 59.587 41.667 0.00 0.00 41.22 3.85
2236 2240 5.605488 AGACTTACAAACCAGAAAGGAGGTA 59.395 40.000 0.00 0.00 41.22 3.08
2237 2241 5.866207 ACTTACAAACCAGAAAGGAGGTAG 58.134 41.667 0.00 0.00 41.22 3.18
2238 2242 5.368816 ACTTACAAACCAGAAAGGAGGTAGT 59.631 40.000 0.00 0.00 41.22 2.73
2239 2243 6.556116 ACTTACAAACCAGAAAGGAGGTAGTA 59.444 38.462 0.00 0.00 41.22 1.82
2240 2244 5.224821 ACAAACCAGAAAGGAGGTAGTAC 57.775 43.478 0.00 0.00 41.22 2.73
2241 2245 4.906060 ACAAACCAGAAAGGAGGTAGTACT 59.094 41.667 0.00 0.00 41.22 2.73
2242 2246 6.080009 ACAAACCAGAAAGGAGGTAGTACTA 58.920 40.000 0.00 0.00 41.22 1.82
2243 2247 6.729569 ACAAACCAGAAAGGAGGTAGTACTAT 59.270 38.462 5.75 0.00 41.22 2.12
2244 2248 7.897565 ACAAACCAGAAAGGAGGTAGTACTATA 59.102 37.037 5.75 0.00 41.22 1.31
2245 2249 8.925338 CAAACCAGAAAGGAGGTAGTACTATAT 58.075 37.037 5.75 0.00 41.22 0.86
2247 2251 9.585369 AACCAGAAAGGAGGTAGTACTATATAC 57.415 37.037 5.75 0.00 41.22 1.47
2248 2252 8.730948 ACCAGAAAGGAGGTAGTACTATATACA 58.269 37.037 5.75 0.00 41.22 2.29
2249 2253 9.756571 CCAGAAAGGAGGTAGTACTATATACAT 57.243 37.037 5.75 0.00 41.22 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 0.978146 AACATGTCCCTAGCGAGCCT 60.978 55.000 0.00 0.00 0.00 4.58
3 4 0.811616 CAACATGTCCCTAGCGAGCC 60.812 60.000 0.00 0.00 0.00 4.70
4 5 0.108138 ACAACATGTCCCTAGCGAGC 60.108 55.000 0.00 0.00 0.00 5.03
5 6 1.645034 CACAACATGTCCCTAGCGAG 58.355 55.000 0.00 0.00 0.00 5.03
6 7 0.249120 CCACAACATGTCCCTAGCGA 59.751 55.000 0.00 0.00 0.00 4.93
7 8 0.036388 ACCACAACATGTCCCTAGCG 60.036 55.000 0.00 0.00 0.00 4.26
8 9 1.279271 AGACCACAACATGTCCCTAGC 59.721 52.381 0.00 0.00 31.76 3.42
9 10 4.162320 ACATAGACCACAACATGTCCCTAG 59.838 45.833 0.00 0.00 31.76 3.02
10 11 4.101114 ACATAGACCACAACATGTCCCTA 58.899 43.478 0.00 0.00 31.76 3.53
11 12 2.912956 ACATAGACCACAACATGTCCCT 59.087 45.455 0.00 0.00 31.76 4.20
12 13 3.350219 ACATAGACCACAACATGTCCC 57.650 47.619 0.00 0.00 31.76 4.46
13 14 6.037172 GTGAATACATAGACCACAACATGTCC 59.963 42.308 0.00 0.00 33.78 4.02
14 15 6.237835 CGTGAATACATAGACCACAACATGTC 60.238 42.308 0.00 0.00 33.78 3.06
15 16 5.580691 CGTGAATACATAGACCACAACATGT 59.419 40.000 0.00 0.00 35.81 3.21
16 17 5.502382 GCGTGAATACATAGACCACAACATG 60.502 44.000 0.00 0.00 0.00 3.21
17 18 4.570772 GCGTGAATACATAGACCACAACAT 59.429 41.667 0.00 0.00 0.00 2.71
18 19 3.930229 GCGTGAATACATAGACCACAACA 59.070 43.478 0.00 0.00 0.00 3.33
19 20 3.000078 CGCGTGAATACATAGACCACAAC 60.000 47.826 0.00 0.00 0.00 3.32
20 21 3.183754 CGCGTGAATACATAGACCACAA 58.816 45.455 0.00 0.00 0.00 3.33
21 22 2.164827 ACGCGTGAATACATAGACCACA 59.835 45.455 12.93 0.00 0.00 4.17
22 23 2.534349 CACGCGTGAATACATAGACCAC 59.466 50.000 34.93 0.00 0.00 4.16
23 24 2.804647 CACGCGTGAATACATAGACCA 58.195 47.619 34.93 0.00 0.00 4.02
24 25 1.521423 GCACGCGTGAATACATAGACC 59.479 52.381 41.19 15.89 0.00 3.85
25 26 2.190161 TGCACGCGTGAATACATAGAC 58.810 47.619 41.19 19.88 0.00 2.59
26 27 2.570442 TGCACGCGTGAATACATAGA 57.430 45.000 41.19 10.39 0.00 1.98
27 28 3.859745 AATGCACGCGTGAATACATAG 57.140 42.857 41.19 13.39 0.00 2.23
28 29 3.180782 CGTAATGCACGCGTGAATACATA 59.819 43.478 41.19 23.00 45.03 2.29
29 30 2.034086 CGTAATGCACGCGTGAATACAT 60.034 45.455 41.19 29.41 45.03 2.29
30 31 1.322040 CGTAATGCACGCGTGAATACA 59.678 47.619 41.19 28.57 45.03 2.29
31 32 1.986525 CGTAATGCACGCGTGAATAC 58.013 50.000 41.19 32.00 45.03 1.89
41 42 4.271533 TGTTATCCGGAAATCGTAATGCAC 59.728 41.667 9.01 0.00 37.11 4.57
42 43 4.271533 GTGTTATCCGGAAATCGTAATGCA 59.728 41.667 9.01 0.00 37.11 3.96
43 44 4.271533 TGTGTTATCCGGAAATCGTAATGC 59.728 41.667 9.01 0.34 37.11 3.56
44 45 5.977171 TGTGTTATCCGGAAATCGTAATG 57.023 39.130 9.01 0.00 37.11 1.90
45 46 7.562454 AATTGTGTTATCCGGAAATCGTAAT 57.438 32.000 9.01 3.30 37.11 1.89
46 47 6.988622 AATTGTGTTATCCGGAAATCGTAA 57.011 33.333 9.01 0.00 37.11 3.18
47 48 9.414295 CTATAATTGTGTTATCCGGAAATCGTA 57.586 33.333 9.01 0.00 37.11 3.43
48 49 7.095355 GCTATAATTGTGTTATCCGGAAATCGT 60.095 37.037 9.01 0.00 37.11 3.73
49 50 7.095397 TGCTATAATTGTGTTATCCGGAAATCG 60.095 37.037 9.01 0.00 38.88 3.34
50 51 8.094798 TGCTATAATTGTGTTATCCGGAAATC 57.905 34.615 9.01 1.80 0.00 2.17
51 52 8.514594 CATGCTATAATTGTGTTATCCGGAAAT 58.485 33.333 9.01 0.00 0.00 2.17
52 53 7.717436 TCATGCTATAATTGTGTTATCCGGAAA 59.283 33.333 9.01 0.99 0.00 3.13
53 54 7.220740 TCATGCTATAATTGTGTTATCCGGAA 58.779 34.615 9.01 0.00 0.00 4.30
54 55 6.764379 TCATGCTATAATTGTGTTATCCGGA 58.236 36.000 6.61 6.61 0.00 5.14
55 56 7.433708 TTCATGCTATAATTGTGTTATCCGG 57.566 36.000 0.00 0.00 0.00 5.14
115 116 9.533831 CCCTAGAGGCAATAATAAAATGGTTAT 57.466 33.333 0.00 0.00 0.00 1.89
116 117 8.934023 CCCTAGAGGCAATAATAAAATGGTTA 57.066 34.615 0.00 0.00 0.00 2.85
117 118 7.839680 CCCTAGAGGCAATAATAAAATGGTT 57.160 36.000 0.00 0.00 0.00 3.67
133 134 4.437682 TGTTGGAAATATGCCCTAGAGG 57.562 45.455 0.00 0.00 39.47 3.69
134 135 4.823989 CCTTGTTGGAAATATGCCCTAGAG 59.176 45.833 0.00 0.00 38.35 2.43
135 136 4.792068 CCTTGTTGGAAATATGCCCTAGA 58.208 43.478 0.00 0.00 38.35 2.43
136 137 3.319122 GCCTTGTTGGAAATATGCCCTAG 59.681 47.826 0.00 0.00 38.35 3.02
137 138 3.052944 AGCCTTGTTGGAAATATGCCCTA 60.053 43.478 0.00 0.00 38.35 3.53
138 139 2.110578 GCCTTGTTGGAAATATGCCCT 58.889 47.619 0.00 0.00 38.35 5.19
139 140 2.101415 GAGCCTTGTTGGAAATATGCCC 59.899 50.000 0.00 0.00 38.35 5.36
140 141 2.101415 GGAGCCTTGTTGGAAATATGCC 59.899 50.000 0.00 0.00 38.35 4.40
141 142 2.101415 GGGAGCCTTGTTGGAAATATGC 59.899 50.000 0.00 0.00 38.35 3.14
142 143 2.695147 GGGGAGCCTTGTTGGAAATATG 59.305 50.000 0.00 0.00 38.35 1.78
143 144 2.314549 TGGGGAGCCTTGTTGGAAATAT 59.685 45.455 0.00 0.00 38.35 1.28
144 145 1.713647 TGGGGAGCCTTGTTGGAAATA 59.286 47.619 0.00 0.00 38.35 1.40
145 146 0.486879 TGGGGAGCCTTGTTGGAAAT 59.513 50.000 0.00 0.00 38.35 2.17
146 147 0.469144 GTGGGGAGCCTTGTTGGAAA 60.469 55.000 0.00 0.00 38.35 3.13
147 148 1.152830 GTGGGGAGCCTTGTTGGAA 59.847 57.895 0.00 0.00 38.35 3.53
148 149 2.840753 GGTGGGGAGCCTTGTTGGA 61.841 63.158 0.00 0.00 38.35 3.53
149 150 2.283173 GGTGGGGAGCCTTGTTGG 60.283 66.667 0.00 0.00 39.35 3.77
150 151 2.484287 ATCGGTGGGGAGCCTTGTTG 62.484 60.000 0.00 0.00 0.00 3.33
151 152 2.231380 ATCGGTGGGGAGCCTTGTT 61.231 57.895 0.00 0.00 0.00 2.83
152 153 2.610859 ATCGGTGGGGAGCCTTGT 60.611 61.111 0.00 0.00 0.00 3.16
153 154 2.124570 CATCGGTGGGGAGCCTTG 60.125 66.667 0.00 0.00 0.00 3.61
154 155 2.285368 TCATCGGTGGGGAGCCTT 60.285 61.111 0.00 0.00 0.00 4.35
180 181 3.967335 GGAGACGGCTATCGCGCT 61.967 66.667 5.56 0.00 43.89 5.92
289 290 0.748450 CATTCGCTGGGCCATGAATT 59.252 50.000 23.89 11.99 0.00 2.17
350 351 4.249661 CCACTAAAGAAGAGCTGAAGACC 58.750 47.826 0.00 0.00 0.00 3.85
382 383 3.313526 GCAGAATGAATCTAATGCCGTGT 59.686 43.478 0.00 0.00 39.69 4.49
411 412 1.448540 CGAACTTCGGCTCCATGCT 60.449 57.895 3.06 0.00 42.39 3.79
473 474 1.192146 CCTTCTTCCTCGGGTGGTCA 61.192 60.000 0.00 0.00 0.00 4.02
493 494 0.849094 TTGGGGTATTGGCTGGAGGT 60.849 55.000 0.00 0.00 0.00 3.85
521 522 1.217183 AGATCCAGCTCCAATGCCAAT 59.783 47.619 0.00 0.00 0.00 3.16
539 540 2.323599 CCCATCACCATGAGCTCTAGA 58.676 52.381 16.19 5.99 30.57 2.43
553 554 1.018840 TCTTCTCCTCCTCCCCATCA 58.981 55.000 0.00 0.00 0.00 3.07
568 569 6.128007 CCTCTCTTCTCTCACAGTAACTCTTC 60.128 46.154 0.00 0.00 0.00 2.87
569 570 5.710099 CCTCTCTTCTCTCACAGTAACTCTT 59.290 44.000 0.00 0.00 0.00 2.85
573 574 3.445805 CCCCTCTCTTCTCTCACAGTAAC 59.554 52.174 0.00 0.00 0.00 2.50
575 576 2.024846 CCCCCTCTCTTCTCTCACAGTA 60.025 54.545 0.00 0.00 0.00 2.74
578 579 0.787084 ACCCCCTCTCTTCTCTCACA 59.213 55.000 0.00 0.00 0.00 3.58
634 635 0.341258 TTCTGCTCCTCTCCATCCCT 59.659 55.000 0.00 0.00 0.00 4.20
649 650 2.344950 GGCATGACTGTCACTCTTCTG 58.655 52.381 13.50 7.51 0.00 3.02
775 777 0.817634 CCCTTGTTGTCAACGGCTGA 60.818 55.000 11.03 0.00 0.00 4.26
777 779 2.193536 GCCCTTGTTGTCAACGGCT 61.194 57.895 19.95 0.00 45.50 5.52
868 871 4.052229 CTCGTCGTCGCCACCCTT 62.052 66.667 0.00 0.00 36.96 3.95
901 904 1.680735 GTTGTGGCACTTGTTGATGGA 59.319 47.619 19.83 0.00 0.00 3.41
905 909 2.884012 CCATAGTTGTGGCACTTGTTGA 59.116 45.455 19.83 0.00 31.43 3.18
1085 1089 0.955428 GCCGTTCATCAGCTTGACCA 60.955 55.000 0.00 0.00 0.00 4.02
1138 1142 2.234661 TCTTGATCTGATGAACGGCTGT 59.765 45.455 0.00 0.00 0.00 4.40
1290 1294 4.388499 TCGAAAGAGGTGGCCCGC 62.388 66.667 0.00 0.00 35.12 6.13
1310 1314 4.141937 TGTTCAAAGCAGGCTCGATAGTAT 60.142 41.667 0.00 0.00 37.40 2.12
1321 1325 7.481275 AAACAATAAACATGTTCAAAGCAGG 57.519 32.000 12.39 0.00 39.98 4.85
1341 1345 4.998033 TCATAACAGTTCCACGCATAAACA 59.002 37.500 0.00 0.00 0.00 2.83
1352 1356 5.408604 CAGTACCACAGTTCATAACAGTTCC 59.591 44.000 0.00 0.00 0.00 3.62
1413 1417 4.934001 ACAGATCATAAGCACAACAGAGTG 59.066 41.667 0.00 0.00 42.37 3.51
1433 1437 0.391661 ACCATACTTCGGCAGCACAG 60.392 55.000 0.00 0.00 0.00 3.66
1571 1575 4.093743 TGTCTTCTTACCTGCATGGACTA 58.906 43.478 8.91 0.00 39.71 2.59
1589 1593 2.862541 TGTTTAGTTGCCTGCATGTCT 58.137 42.857 0.00 0.00 0.00 3.41
1591 1595 2.692557 TGTTGTTTAGTTGCCTGCATGT 59.307 40.909 0.00 0.00 0.00 3.21
1671 1675 0.249155 GCGCTACAGTACCCGCATTA 60.249 55.000 13.41 0.00 45.21 1.90
1721 1725 1.133790 GATGAAACCACATGGCTCTGC 59.866 52.381 0.00 0.00 39.32 4.26
1722 1726 2.163010 GTGATGAAACCACATGGCTCTG 59.837 50.000 0.00 0.00 39.32 3.35
1723 1727 2.440409 GTGATGAAACCACATGGCTCT 58.560 47.619 0.00 0.00 39.32 4.09
1724 1728 1.131126 CGTGATGAAACCACATGGCTC 59.869 52.381 0.00 0.00 39.32 4.70
1725 1729 1.167851 CGTGATGAAACCACATGGCT 58.832 50.000 0.00 0.00 39.32 4.75
1726 1730 1.164411 TCGTGATGAAACCACATGGC 58.836 50.000 0.00 0.00 39.32 4.40
1727 1731 3.009026 TCATCGTGATGAAACCACATGG 58.991 45.455 10.01 0.00 44.14 3.66
1731 1735 7.777467 TCATGAAGTCATCGTGATGAAACCAC 61.777 42.308 13.77 2.78 46.68 4.16
1732 1736 5.799597 TCATGAAGTCATCGTGATGAAACCA 60.800 40.000 13.77 11.48 46.68 3.67
1733 1737 4.631377 TCATGAAGTCATCGTGATGAAACC 59.369 41.667 13.77 6.84 46.68 3.27
1734 1738 5.784750 TCATGAAGTCATCGTGATGAAAC 57.215 39.130 13.77 8.98 46.68 2.78
1741 1745 4.934075 ACACATTCATGAAGTCATCGTG 57.066 40.909 14.54 14.37 44.94 4.35
1742 1746 5.240891 AGAACACATTCATGAAGTCATCGT 58.759 37.500 14.54 2.55 37.29 3.73
1743 1747 5.791367 AGAACACATTCATGAAGTCATCG 57.209 39.130 14.54 1.95 37.29 3.84
1744 1748 7.814642 AGAAAGAACACATTCATGAAGTCATC 58.185 34.615 14.54 8.30 37.29 2.92
1745 1749 7.756395 AGAAAGAACACATTCATGAAGTCAT 57.244 32.000 14.54 0.00 37.29 3.06
1746 1750 7.572523 AAGAAAGAACACATTCATGAAGTCA 57.427 32.000 14.54 0.00 37.29 3.41
1747 1751 8.348507 AGAAAGAAAGAACACATTCATGAAGTC 58.651 33.333 14.54 6.11 37.29 3.01
1748 1752 8.230472 AGAAAGAAAGAACACATTCATGAAGT 57.770 30.769 14.54 9.18 37.29 3.01
1749 1753 9.525409 AAAGAAAGAAAGAACACATTCATGAAG 57.475 29.630 14.54 8.57 37.29 3.02
1750 1754 9.874205 AAAAGAAAGAAAGAACACATTCATGAA 57.126 25.926 11.26 11.26 37.29 2.57
1751 1755 9.874205 AAAAAGAAAGAAAGAACACATTCATGA 57.126 25.926 0.00 0.00 37.29 3.07
1753 1757 9.874205 TGAAAAAGAAAGAAAGAACACATTCAT 57.126 25.926 0.00 0.00 37.29 2.57
1754 1758 9.139174 GTGAAAAAGAAAGAAAGAACACATTCA 57.861 29.630 0.00 0.00 37.29 2.57
1755 1759 8.595533 GGTGAAAAAGAAAGAAAGAACACATTC 58.404 33.333 0.00 0.00 34.78 2.67
1756 1760 8.314021 AGGTGAAAAAGAAAGAAAGAACACATT 58.686 29.630 0.00 0.00 0.00 2.71
1757 1761 7.840931 AGGTGAAAAAGAAAGAAAGAACACAT 58.159 30.769 0.00 0.00 0.00 3.21
1758 1762 7.227049 AGGTGAAAAAGAAAGAAAGAACACA 57.773 32.000 0.00 0.00 0.00 3.72
1759 1763 8.435430 CAAAGGTGAAAAAGAAAGAAAGAACAC 58.565 33.333 0.00 0.00 0.00 3.32
1760 1764 8.147704 ACAAAGGTGAAAAAGAAAGAAAGAACA 58.852 29.630 0.00 0.00 0.00 3.18
1761 1765 8.534333 ACAAAGGTGAAAAAGAAAGAAAGAAC 57.466 30.769 0.00 0.00 0.00 3.01
1762 1766 9.554395 AAACAAAGGTGAAAAAGAAAGAAAGAA 57.446 25.926 0.00 0.00 0.00 2.52
1777 1781 9.255304 GCACTTTTCAAATATAAACAAAGGTGA 57.745 29.630 8.60 0.00 36.60 4.02
1778 1782 9.260002 AGCACTTTTCAAATATAAACAAAGGTG 57.740 29.630 0.00 0.00 37.20 4.00
1787 1791 9.609346 GGAGGTAGTAGCACTTTTCAAATATAA 57.391 33.333 1.58 0.00 0.00 0.98
1788 1792 7.924412 CGGAGGTAGTAGCACTTTTCAAATATA 59.076 37.037 1.58 0.00 0.00 0.86
1789 1793 6.761714 CGGAGGTAGTAGCACTTTTCAAATAT 59.238 38.462 1.58 0.00 0.00 1.28
1790 1794 6.103997 CGGAGGTAGTAGCACTTTTCAAATA 58.896 40.000 1.58 0.00 0.00 1.40
1791 1795 4.935808 CGGAGGTAGTAGCACTTTTCAAAT 59.064 41.667 1.58 0.00 0.00 2.32
1792 1796 4.202284 ACGGAGGTAGTAGCACTTTTCAAA 60.202 41.667 1.58 0.00 0.00 2.69
1793 1797 3.322828 ACGGAGGTAGTAGCACTTTTCAA 59.677 43.478 1.58 0.00 0.00 2.69
1794 1798 2.895404 ACGGAGGTAGTAGCACTTTTCA 59.105 45.455 1.58 0.00 0.00 2.69
1795 1799 3.509740 GACGGAGGTAGTAGCACTTTTC 58.490 50.000 1.58 0.00 0.00 2.29
1796 1800 2.233186 GGACGGAGGTAGTAGCACTTTT 59.767 50.000 1.58 0.00 0.00 2.27
1797 1801 1.823610 GGACGGAGGTAGTAGCACTTT 59.176 52.381 1.58 0.00 0.00 2.66
1798 1802 1.472188 GGACGGAGGTAGTAGCACTT 58.528 55.000 1.58 0.00 0.00 3.16
1799 1803 0.395448 GGGACGGAGGTAGTAGCACT 60.395 60.000 1.58 0.00 0.00 4.40
1800 1804 2.113767 GGGACGGAGGTAGTAGCAC 58.886 63.158 1.58 0.00 0.00 4.40
1801 1805 4.672251 GGGACGGAGGTAGTAGCA 57.328 61.111 1.58 0.00 0.00 3.49
1814 1818 3.378339 CGAATGACTTATACACCGGGAC 58.622 50.000 6.32 0.00 0.00 4.46
1815 1819 2.223876 GCGAATGACTTATACACCGGGA 60.224 50.000 6.32 0.00 0.00 5.14
1816 1820 2.132762 GCGAATGACTTATACACCGGG 58.867 52.381 6.32 0.00 0.00 5.73
1817 1821 1.784856 CGCGAATGACTTATACACCGG 59.215 52.381 0.00 0.00 0.00 5.28
1818 1822 2.456989 ACGCGAATGACTTATACACCG 58.543 47.619 15.93 0.00 0.00 4.94
1819 1823 4.604976 ACTACGCGAATGACTTATACACC 58.395 43.478 15.93 0.00 0.00 4.16
1820 1824 5.970023 AGAACTACGCGAATGACTTATACAC 59.030 40.000 15.93 0.00 0.00 2.90
1821 1825 6.127810 AGAACTACGCGAATGACTTATACA 57.872 37.500 15.93 0.00 0.00 2.29
1822 1826 6.796072 CCTAGAACTACGCGAATGACTTATAC 59.204 42.308 15.93 0.00 0.00 1.47
1823 1827 6.484643 ACCTAGAACTACGCGAATGACTTATA 59.515 38.462 15.93 0.00 0.00 0.98
1824 1828 5.298777 ACCTAGAACTACGCGAATGACTTAT 59.701 40.000 15.93 0.00 0.00 1.73
1825 1829 4.637534 ACCTAGAACTACGCGAATGACTTA 59.362 41.667 15.93 0.00 0.00 2.24
1826 1830 3.442977 ACCTAGAACTACGCGAATGACTT 59.557 43.478 15.93 0.00 0.00 3.01
1827 1831 3.015327 ACCTAGAACTACGCGAATGACT 58.985 45.455 15.93 9.07 0.00 3.41
1828 1832 3.361414 GACCTAGAACTACGCGAATGAC 58.639 50.000 15.93 0.66 0.00 3.06
1829 1833 2.031314 CGACCTAGAACTACGCGAATGA 59.969 50.000 15.93 0.00 0.00 2.57
1830 1834 2.031314 TCGACCTAGAACTACGCGAATG 59.969 50.000 15.93 4.47 0.00 2.67
1831 1835 2.283298 TCGACCTAGAACTACGCGAAT 58.717 47.619 15.93 0.00 0.00 3.34
1832 1836 1.725641 TCGACCTAGAACTACGCGAA 58.274 50.000 15.93 0.00 0.00 4.70
1833 1837 1.945387 ATCGACCTAGAACTACGCGA 58.055 50.000 15.93 0.00 0.00 5.87
1834 1838 3.867055 TTATCGACCTAGAACTACGCG 57.133 47.619 3.53 3.53 0.00 6.01
1835 1839 7.859875 AGTTAAATTATCGACCTAGAACTACGC 59.140 37.037 0.00 0.00 0.00 4.42
1894 1898 9.887629 TCCACACGGATGTAGTTTTTAAATATA 57.112 29.630 0.00 0.00 36.72 0.86
1895 1899 8.795842 TCCACACGGATGTAGTTTTTAAATAT 57.204 30.769 0.00 0.00 36.72 1.28
1896 1900 8.618702 TTCCACACGGATGTAGTTTTTAAATA 57.381 30.769 0.00 0.00 42.41 1.40
1897 1901 7.513371 TTCCACACGGATGTAGTTTTTAAAT 57.487 32.000 0.00 0.00 42.41 1.40
1898 1902 6.939132 TTCCACACGGATGTAGTTTTTAAA 57.061 33.333 0.00 0.00 42.41 1.52
1899 1903 6.939132 TTTCCACACGGATGTAGTTTTTAA 57.061 33.333 0.00 0.00 42.41 1.52
1900 1904 6.938030 AGATTTCCACACGGATGTAGTTTTTA 59.062 34.615 0.00 0.00 42.41 1.52
1901 1905 5.768164 AGATTTCCACACGGATGTAGTTTTT 59.232 36.000 0.00 0.00 42.41 1.94
1902 1906 5.313712 AGATTTCCACACGGATGTAGTTTT 58.686 37.500 0.00 0.00 42.41 2.43
1903 1907 4.906618 AGATTTCCACACGGATGTAGTTT 58.093 39.130 0.00 0.00 42.41 2.66
1904 1908 4.553330 AGATTTCCACACGGATGTAGTT 57.447 40.909 0.00 0.00 42.41 2.24
1905 1909 4.710375 ACTAGATTTCCACACGGATGTAGT 59.290 41.667 0.00 0.00 42.41 2.73
1906 1910 5.043903 CACTAGATTTCCACACGGATGTAG 58.956 45.833 0.00 0.00 42.41 2.74
1907 1911 4.142026 CCACTAGATTTCCACACGGATGTA 60.142 45.833 0.00 0.00 42.41 2.29
1908 1912 3.369471 CCACTAGATTTCCACACGGATGT 60.369 47.826 0.00 0.00 42.41 3.06
1909 1913 3.198068 CCACTAGATTTCCACACGGATG 58.802 50.000 0.00 0.00 42.41 3.51
1910 1914 2.838202 ACCACTAGATTTCCACACGGAT 59.162 45.455 0.00 0.00 42.41 4.18
1911 1915 2.253610 ACCACTAGATTTCCACACGGA 58.746 47.619 0.00 0.00 40.60 4.69
1912 1916 2.762535 ACCACTAGATTTCCACACGG 57.237 50.000 0.00 0.00 0.00 4.94
1913 1917 6.145338 AGTATACCACTAGATTTCCACACG 57.855 41.667 0.00 0.00 34.98 4.49
1914 1918 8.788325 AAAAGTATACCACTAGATTTCCACAC 57.212 34.615 0.00 0.00 36.04 3.82
1915 1919 8.598916 TGAAAAGTATACCACTAGATTTCCACA 58.401 33.333 0.00 0.00 36.04 4.17
1916 1920 9.614792 ATGAAAAGTATACCACTAGATTTCCAC 57.385 33.333 0.00 0.00 36.04 4.02
1917 1921 9.613428 CATGAAAAGTATACCACTAGATTTCCA 57.387 33.333 0.00 0.00 36.04 3.53
1918 1922 9.832445 TCATGAAAAGTATACCACTAGATTTCC 57.168 33.333 0.00 0.00 36.04 3.13
1960 1964 9.760077 GTTCTAGGTCATCGATTTAAGGAATTA 57.240 33.333 0.00 0.00 0.00 1.40
1961 1965 8.487028 AGTTCTAGGTCATCGATTTAAGGAATT 58.513 33.333 0.00 0.00 0.00 2.17
1962 1966 8.024145 AGTTCTAGGTCATCGATTTAAGGAAT 57.976 34.615 0.00 0.00 0.00 3.01
1963 1967 7.419711 AGTTCTAGGTCATCGATTTAAGGAA 57.580 36.000 0.00 0.00 0.00 3.36
1964 1968 7.255035 CGTAGTTCTAGGTCATCGATTTAAGGA 60.255 40.741 0.00 0.00 0.00 3.36
1965 1969 6.856938 CGTAGTTCTAGGTCATCGATTTAAGG 59.143 42.308 0.00 0.00 0.00 2.69
1966 1970 6.360148 GCGTAGTTCTAGGTCATCGATTTAAG 59.640 42.308 0.00 0.00 0.00 1.85
1967 1971 6.204359 GCGTAGTTCTAGGTCATCGATTTAA 58.796 40.000 0.00 0.00 0.00 1.52
1968 1972 5.559608 CGCGTAGTTCTAGGTCATCGATTTA 60.560 44.000 0.00 0.00 0.00 1.40
1969 1973 4.608951 GCGTAGTTCTAGGTCATCGATTT 58.391 43.478 0.00 0.00 0.00 2.17
1970 1974 3.303857 CGCGTAGTTCTAGGTCATCGATT 60.304 47.826 0.00 0.00 0.00 3.34
1971 1975 2.223611 CGCGTAGTTCTAGGTCATCGAT 59.776 50.000 0.00 0.00 0.00 3.59
1972 1976 1.596260 CGCGTAGTTCTAGGTCATCGA 59.404 52.381 0.00 0.00 0.00 3.59
1973 1977 1.596260 TCGCGTAGTTCTAGGTCATCG 59.404 52.381 5.77 0.00 0.00 3.84
1974 1978 3.687572 TTCGCGTAGTTCTAGGTCATC 57.312 47.619 5.77 0.00 0.00 2.92
1975 1979 3.630769 TCATTCGCGTAGTTCTAGGTCAT 59.369 43.478 5.77 0.00 0.00 3.06
1976 1980 3.011818 TCATTCGCGTAGTTCTAGGTCA 58.988 45.455 5.77 0.00 0.00 4.02
1977 1981 3.065095 AGTCATTCGCGTAGTTCTAGGTC 59.935 47.826 5.77 0.00 0.00 3.85
1978 1982 3.015327 AGTCATTCGCGTAGTTCTAGGT 58.985 45.455 5.77 0.00 0.00 3.08
1979 1983 3.694535 AGTCATTCGCGTAGTTCTAGG 57.305 47.619 5.77 0.00 0.00 3.02
1980 1984 7.320797 GTGTATAAGTCATTCGCGTAGTTCTAG 59.679 40.741 5.77 0.00 0.00 2.43
1981 1985 7.128331 GTGTATAAGTCATTCGCGTAGTTCTA 58.872 38.462 5.77 0.00 0.00 2.10
1982 1986 5.970023 GTGTATAAGTCATTCGCGTAGTTCT 59.030 40.000 5.77 0.00 0.00 3.01
1983 1987 5.172771 GGTGTATAAGTCATTCGCGTAGTTC 59.827 44.000 5.77 0.00 0.00 3.01
1984 1988 5.039333 GGTGTATAAGTCATTCGCGTAGTT 58.961 41.667 5.77 2.59 0.00 2.24
1985 1989 4.498682 GGGTGTATAAGTCATTCGCGTAGT 60.499 45.833 5.77 0.00 0.00 2.73
1986 1990 3.979495 GGGTGTATAAGTCATTCGCGTAG 59.021 47.826 5.77 0.00 0.00 3.51
1987 1991 3.548616 CGGGTGTATAAGTCATTCGCGTA 60.549 47.826 5.77 0.00 0.00 4.42
1988 1992 2.797087 CGGGTGTATAAGTCATTCGCGT 60.797 50.000 5.77 0.00 0.00 6.01
1989 1993 1.784856 CGGGTGTATAAGTCATTCGCG 59.215 52.381 0.00 0.00 0.00 5.87
1990 1994 2.132762 CCGGGTGTATAAGTCATTCGC 58.867 52.381 0.00 0.00 0.00 4.70
1991 1995 3.181484 TGTCCGGGTGTATAAGTCATTCG 60.181 47.826 0.00 0.00 0.00 3.34
1992 1996 4.098960 TCTGTCCGGGTGTATAAGTCATTC 59.901 45.833 0.00 0.00 0.00 2.67
1993 1997 4.028131 TCTGTCCGGGTGTATAAGTCATT 58.972 43.478 0.00 0.00 0.00 2.57
1994 1998 3.637229 CTCTGTCCGGGTGTATAAGTCAT 59.363 47.826 0.00 0.00 0.00 3.06
1995 1999 3.021695 CTCTGTCCGGGTGTATAAGTCA 58.978 50.000 0.00 0.00 0.00 3.41
1996 2000 2.361438 CCTCTGTCCGGGTGTATAAGTC 59.639 54.545 0.00 0.00 0.00 3.01
1997 2001 2.385803 CCTCTGTCCGGGTGTATAAGT 58.614 52.381 0.00 0.00 0.00 2.24
1998 2002 1.687123 CCCTCTGTCCGGGTGTATAAG 59.313 57.143 0.00 0.00 36.91 1.73
1999 2003 1.288633 TCCCTCTGTCCGGGTGTATAA 59.711 52.381 0.00 0.00 42.56 0.98
2000 2004 0.928505 TCCCTCTGTCCGGGTGTATA 59.071 55.000 0.00 0.00 42.56 1.47
2001 2005 0.397254 CTCCCTCTGTCCGGGTGTAT 60.397 60.000 0.00 0.00 42.56 2.29
2002 2006 1.000019 CTCCCTCTGTCCGGGTGTA 60.000 63.158 0.00 0.00 42.56 2.90
2003 2007 1.797018 TACTCCCTCTGTCCGGGTGT 61.797 60.000 0.00 7.80 46.82 4.16
2004 2008 1.000019 TACTCCCTCTGTCCGGGTG 60.000 63.158 0.00 0.00 42.56 4.61
2005 2009 1.000107 GTACTCCCTCTGTCCGGGT 60.000 63.158 0.00 0.00 42.56 5.28
2006 2010 1.757340 GGTACTCCCTCTGTCCGGG 60.757 68.421 0.00 0.00 43.38 5.73
2007 2011 1.306970 AGGTACTCCCTCTGTCCGG 59.693 63.158 0.00 0.00 40.71 5.14
2020 2024 5.424573 ACCTTATACACTGGAAAGGAGGTAC 59.575 44.000 6.95 0.00 40.85 3.34
2021 2025 5.596763 ACCTTATACACTGGAAAGGAGGTA 58.403 41.667 6.95 0.00 40.85 3.08
2022 2026 4.436079 ACCTTATACACTGGAAAGGAGGT 58.564 43.478 6.95 0.00 40.85 3.85
2023 2027 5.437191 AACCTTATACACTGGAAAGGAGG 57.563 43.478 6.95 0.00 40.85 4.30
2024 2028 5.123979 GCAAACCTTATACACTGGAAAGGAG 59.876 44.000 6.95 0.00 40.85 3.69
2025 2029 5.007682 GCAAACCTTATACACTGGAAAGGA 58.992 41.667 6.95 0.00 40.85 3.36
2026 2030 4.764823 TGCAAACCTTATACACTGGAAAGG 59.235 41.667 0.00 0.00 43.42 3.11
2027 2031 5.957842 TGCAAACCTTATACACTGGAAAG 57.042 39.130 0.00 0.00 0.00 2.62
2028 2032 5.184864 CCATGCAAACCTTATACACTGGAAA 59.815 40.000 0.00 0.00 0.00 3.13
2029 2033 4.704540 CCATGCAAACCTTATACACTGGAA 59.295 41.667 0.00 0.00 0.00 3.53
2030 2034 4.018870 TCCATGCAAACCTTATACACTGGA 60.019 41.667 0.00 0.00 0.00 3.86
2031 2035 4.269183 TCCATGCAAACCTTATACACTGG 58.731 43.478 0.00 0.00 0.00 4.00
2032 2036 7.663081 AGATATCCATGCAAACCTTATACACTG 59.337 37.037 0.00 0.00 0.00 3.66
2033 2037 7.749666 AGATATCCATGCAAACCTTATACACT 58.250 34.615 0.00 0.00 0.00 3.55
2034 2038 7.986085 AGATATCCATGCAAACCTTATACAC 57.014 36.000 0.00 0.00 0.00 2.90
2035 2039 8.321353 CCTAGATATCCATGCAAACCTTATACA 58.679 37.037 0.00 0.00 0.00 2.29
2036 2040 8.322091 ACCTAGATATCCATGCAAACCTTATAC 58.678 37.037 0.00 0.00 0.00 1.47
2037 2041 8.449423 ACCTAGATATCCATGCAAACCTTATA 57.551 34.615 0.00 0.00 0.00 0.98
2038 2042 7.335127 ACCTAGATATCCATGCAAACCTTAT 57.665 36.000 0.00 0.00 0.00 1.73
2039 2043 6.763715 ACCTAGATATCCATGCAAACCTTA 57.236 37.500 0.00 0.00 0.00 2.69
2040 2044 5.653255 ACCTAGATATCCATGCAAACCTT 57.347 39.130 0.00 0.00 0.00 3.50
2041 2045 5.132648 TCAACCTAGATATCCATGCAAACCT 59.867 40.000 0.00 0.00 0.00 3.50
2042 2046 5.239525 GTCAACCTAGATATCCATGCAAACC 59.760 44.000 0.00 0.00 0.00 3.27
2043 2047 5.822519 TGTCAACCTAGATATCCATGCAAAC 59.177 40.000 0.00 0.00 0.00 2.93
2044 2048 6.000246 TGTCAACCTAGATATCCATGCAAA 58.000 37.500 0.00 0.00 0.00 3.68
2045 2049 5.628797 TGTCAACCTAGATATCCATGCAA 57.371 39.130 0.00 0.00 0.00 4.08
2046 2050 5.104569 TGTTGTCAACCTAGATATCCATGCA 60.105 40.000 13.13 0.00 0.00 3.96
2047 2051 5.237344 GTGTTGTCAACCTAGATATCCATGC 59.763 44.000 13.13 0.00 0.00 4.06
2048 2052 5.760253 GGTGTTGTCAACCTAGATATCCATG 59.240 44.000 13.13 0.00 0.00 3.66
2049 2053 5.428457 TGGTGTTGTCAACCTAGATATCCAT 59.572 40.000 13.13 0.00 0.00 3.41
2050 2054 4.780554 TGGTGTTGTCAACCTAGATATCCA 59.219 41.667 13.13 6.19 0.00 3.41
2051 2055 5.353394 TGGTGTTGTCAACCTAGATATCC 57.647 43.478 13.13 4.05 0.00 2.59
2052 2056 5.291128 CGTTGGTGTTGTCAACCTAGATATC 59.709 44.000 13.13 0.00 40.80 1.63
2053 2057 5.175859 CGTTGGTGTTGTCAACCTAGATAT 58.824 41.667 13.13 0.00 40.80 1.63
2054 2058 4.039488 ACGTTGGTGTTGTCAACCTAGATA 59.961 41.667 13.13 0.00 40.80 1.98
2055 2059 3.181458 ACGTTGGTGTTGTCAACCTAGAT 60.181 43.478 13.13 0.00 40.80 1.98
2056 2060 2.168936 ACGTTGGTGTTGTCAACCTAGA 59.831 45.455 13.13 0.00 40.80 2.43
2057 2061 2.557317 ACGTTGGTGTTGTCAACCTAG 58.443 47.619 13.13 2.04 40.80 3.02
2058 2062 2.695127 ACGTTGGTGTTGTCAACCTA 57.305 45.000 13.13 0.24 40.80 3.08
2059 2063 2.695127 TACGTTGGTGTTGTCAACCT 57.305 45.000 13.13 0.00 40.80 3.50
2060 2064 3.974871 ATTACGTTGGTGTTGTCAACC 57.025 42.857 13.13 0.00 40.80 3.77
2061 2065 5.406767 TGTATTACGTTGGTGTTGTCAAC 57.593 39.130 8.86 8.86 40.57 3.18
2062 2066 5.585445 ACTTGTATTACGTTGGTGTTGTCAA 59.415 36.000 0.00 0.00 0.00 3.18
2063 2067 5.117584 ACTTGTATTACGTTGGTGTTGTCA 58.882 37.500 0.00 0.00 0.00 3.58
2064 2068 5.662211 ACTTGTATTACGTTGGTGTTGTC 57.338 39.130 0.00 0.00 0.00 3.18
2065 2069 7.733402 ATAACTTGTATTACGTTGGTGTTGT 57.267 32.000 0.00 0.00 0.00 3.32
2112 2116 9.683069 GGCATACGATTTGAAATTTCTAATGAT 57.317 29.630 25.74 17.46 33.83 2.45
2113 2117 8.902806 AGGCATACGATTTGAAATTTCTAATGA 58.097 29.630 25.74 14.50 33.83 2.57
2114 2118 9.520204 AAGGCATACGATTTGAAATTTCTAATG 57.480 29.630 25.74 20.00 33.83 1.90
2115 2119 9.736023 GAAGGCATACGATTTGAAATTTCTAAT 57.264 29.630 22.40 22.40 35.80 1.73
2116 2120 8.956426 AGAAGGCATACGATTTGAAATTTCTAA 58.044 29.630 18.64 17.10 0.00 2.10
2117 2121 8.506168 AGAAGGCATACGATTTGAAATTTCTA 57.494 30.769 18.64 8.95 0.00 2.10
2118 2122 7.396540 AGAAGGCATACGATTTGAAATTTCT 57.603 32.000 18.64 0.00 0.00 2.52
2119 2123 9.010366 GTTAGAAGGCATACGATTTGAAATTTC 57.990 33.333 11.41 11.41 0.00 2.17
2120 2124 7.973944 GGTTAGAAGGCATACGATTTGAAATTT 59.026 33.333 0.00 0.00 0.00 1.82
2121 2125 7.480810 GGTTAGAAGGCATACGATTTGAAATT 58.519 34.615 0.00 0.00 0.00 1.82
2122 2126 6.238374 CGGTTAGAAGGCATACGATTTGAAAT 60.238 38.462 0.00 0.00 0.00 2.17
2123 2127 5.064198 CGGTTAGAAGGCATACGATTTGAAA 59.936 40.000 0.00 0.00 0.00 2.69
2124 2128 4.569162 CGGTTAGAAGGCATACGATTTGAA 59.431 41.667 0.00 0.00 0.00 2.69
2125 2129 4.116961 CGGTTAGAAGGCATACGATTTGA 58.883 43.478 0.00 0.00 0.00 2.69
2126 2130 3.869246 ACGGTTAGAAGGCATACGATTTG 59.131 43.478 0.00 0.00 0.00 2.32
2127 2131 4.133013 ACGGTTAGAAGGCATACGATTT 57.867 40.909 0.00 0.00 0.00 2.17
2128 2132 3.814005 ACGGTTAGAAGGCATACGATT 57.186 42.857 0.00 0.00 0.00 3.34
2129 2133 6.579666 TTATACGGTTAGAAGGCATACGAT 57.420 37.500 0.00 0.00 0.00 3.73
2130 2134 6.579666 ATTATACGGTTAGAAGGCATACGA 57.420 37.500 0.00 0.00 0.00 3.43
2131 2135 7.647907 AAATTATACGGTTAGAAGGCATACG 57.352 36.000 0.00 0.00 0.00 3.06
2154 2158 9.695526 ACGTATGTTGAGTTGTACAGTATAAAA 57.304 29.630 0.00 0.00 0.00 1.52
2155 2159 9.345517 GACGTATGTTGAGTTGTACAGTATAAA 57.654 33.333 0.00 0.00 0.00 1.40
2156 2160 7.693536 CGACGTATGTTGAGTTGTACAGTATAA 59.306 37.037 0.00 0.00 0.00 0.98
2157 2161 7.182089 CGACGTATGTTGAGTTGTACAGTATA 58.818 38.462 0.00 0.00 0.00 1.47
2158 2162 6.025896 CGACGTATGTTGAGTTGTACAGTAT 58.974 40.000 0.00 0.00 0.00 2.12
2159 2163 5.384787 CGACGTATGTTGAGTTGTACAGTA 58.615 41.667 0.00 0.00 0.00 2.74
2160 2164 4.224433 CGACGTATGTTGAGTTGTACAGT 58.776 43.478 0.00 0.00 0.00 3.55
2161 2165 3.606777 CCGACGTATGTTGAGTTGTACAG 59.393 47.826 3.69 0.00 0.00 2.74
2162 2166 3.004629 ACCGACGTATGTTGAGTTGTACA 59.995 43.478 3.69 0.00 0.00 2.90
2163 2167 3.568538 ACCGACGTATGTTGAGTTGTAC 58.431 45.455 3.69 0.00 0.00 2.90
2164 2168 3.252944 TGACCGACGTATGTTGAGTTGTA 59.747 43.478 3.69 0.00 0.00 2.41
2165 2169 2.034939 TGACCGACGTATGTTGAGTTGT 59.965 45.455 3.69 0.00 0.00 3.32
2166 2170 2.668250 TGACCGACGTATGTTGAGTTG 58.332 47.619 3.69 0.00 0.00 3.16
2167 2171 3.374220 TTGACCGACGTATGTTGAGTT 57.626 42.857 3.69 0.00 0.00 3.01
2168 2172 3.054878 GTTTGACCGACGTATGTTGAGT 58.945 45.455 3.69 0.50 0.00 3.41
2169 2173 3.314553 AGTTTGACCGACGTATGTTGAG 58.685 45.455 3.69 0.00 0.00 3.02
2170 2174 3.374220 AGTTTGACCGACGTATGTTGA 57.626 42.857 3.69 0.00 0.00 3.18
2171 2175 4.032445 CCATAGTTTGACCGACGTATGTTG 59.968 45.833 0.00 0.00 0.00 3.33
2172 2176 4.082081 TCCATAGTTTGACCGACGTATGTT 60.082 41.667 0.00 0.00 0.00 2.71
2173 2177 3.444742 TCCATAGTTTGACCGACGTATGT 59.555 43.478 0.00 0.00 0.00 2.29
2174 2178 4.036567 TCCATAGTTTGACCGACGTATG 57.963 45.455 0.00 0.00 0.00 2.39
2175 2179 4.583489 AGATCCATAGTTTGACCGACGTAT 59.417 41.667 0.00 0.00 0.00 3.06
2176 2180 3.949754 AGATCCATAGTTTGACCGACGTA 59.050 43.478 0.00 0.00 0.00 3.57
2177 2181 2.758979 AGATCCATAGTTTGACCGACGT 59.241 45.455 0.00 0.00 0.00 4.34
2178 2182 3.438297 AGATCCATAGTTTGACCGACG 57.562 47.619 0.00 0.00 0.00 5.12
2179 2183 5.531659 TCTCTAGATCCATAGTTTGACCGAC 59.468 44.000 0.00 0.00 0.00 4.79
2180 2184 5.691896 TCTCTAGATCCATAGTTTGACCGA 58.308 41.667 0.00 0.00 0.00 4.69
2181 2185 6.582677 ATCTCTAGATCCATAGTTTGACCG 57.417 41.667 0.00 0.00 0.00 4.79
2182 2186 7.531716 CGTATCTCTAGATCCATAGTTTGACC 58.468 42.308 0.00 0.00 36.05 4.02
2183 2187 7.024768 GCGTATCTCTAGATCCATAGTTTGAC 58.975 42.308 0.00 0.00 36.05 3.18
2184 2188 6.128254 CGCGTATCTCTAGATCCATAGTTTGA 60.128 42.308 0.00 0.00 36.05 2.69
2185 2189 6.024664 CGCGTATCTCTAGATCCATAGTTTG 58.975 44.000 0.00 0.00 36.05 2.93
2186 2190 5.392165 GCGCGTATCTCTAGATCCATAGTTT 60.392 44.000 8.43 0.00 36.05 2.66
2187 2191 4.095185 GCGCGTATCTCTAGATCCATAGTT 59.905 45.833 8.43 0.00 36.05 2.24
2188 2192 3.623960 GCGCGTATCTCTAGATCCATAGT 59.376 47.826 8.43 0.00 36.05 2.12
2189 2193 3.623510 TGCGCGTATCTCTAGATCCATAG 59.376 47.826 8.43 0.00 36.05 2.23
2190 2194 3.606687 TGCGCGTATCTCTAGATCCATA 58.393 45.455 8.43 0.00 36.05 2.74
2191 2195 2.437413 TGCGCGTATCTCTAGATCCAT 58.563 47.619 8.43 0.00 36.05 3.41
2192 2196 1.892209 TGCGCGTATCTCTAGATCCA 58.108 50.000 8.43 0.00 36.05 3.41
2193 2197 2.484651 TCTTGCGCGTATCTCTAGATCC 59.515 50.000 8.43 0.00 36.05 3.36
2194 2198 3.187637 AGTCTTGCGCGTATCTCTAGATC 59.812 47.826 8.43 0.00 36.05 2.75
2195 2199 3.142951 AGTCTTGCGCGTATCTCTAGAT 58.857 45.455 8.43 0.00 38.51 1.98
2196 2200 2.562635 AGTCTTGCGCGTATCTCTAGA 58.437 47.619 8.43 0.00 0.00 2.43
2197 2201 3.341857 AAGTCTTGCGCGTATCTCTAG 57.658 47.619 8.43 0.00 0.00 2.43
2198 2202 3.624410 TGTAAGTCTTGCGCGTATCTCTA 59.376 43.478 8.43 0.00 0.00 2.43
2199 2203 2.422479 TGTAAGTCTTGCGCGTATCTCT 59.578 45.455 8.43 0.00 0.00 3.10
2200 2204 2.793933 TGTAAGTCTTGCGCGTATCTC 58.206 47.619 8.43 0.00 0.00 2.75
2201 2205 2.933495 TGTAAGTCTTGCGCGTATCT 57.067 45.000 8.43 0.00 0.00 1.98
2202 2206 3.483085 GGTTTGTAAGTCTTGCGCGTATC 60.483 47.826 8.43 0.00 0.00 2.24
2203 2207 2.414138 GGTTTGTAAGTCTTGCGCGTAT 59.586 45.455 8.43 0.00 0.00 3.06
2204 2208 1.794116 GGTTTGTAAGTCTTGCGCGTA 59.206 47.619 8.43 0.00 0.00 4.42
2205 2209 0.584876 GGTTTGTAAGTCTTGCGCGT 59.415 50.000 8.43 0.00 0.00 6.01
2206 2210 0.584396 TGGTTTGTAAGTCTTGCGCG 59.416 50.000 0.00 0.00 0.00 6.86
2207 2211 1.871039 TCTGGTTTGTAAGTCTTGCGC 59.129 47.619 0.00 0.00 0.00 6.09
2208 2212 4.527564 CTTTCTGGTTTGTAAGTCTTGCG 58.472 43.478 0.00 0.00 0.00 4.85
2209 2213 4.578928 TCCTTTCTGGTTTGTAAGTCTTGC 59.421 41.667 0.00 0.00 37.07 4.01
2210 2214 5.239525 CCTCCTTTCTGGTTTGTAAGTCTTG 59.760 44.000 0.00 0.00 37.07 3.02
2211 2215 5.104067 ACCTCCTTTCTGGTTTGTAAGTCTT 60.104 40.000 0.00 0.00 37.07 3.01
2212 2216 4.412528 ACCTCCTTTCTGGTTTGTAAGTCT 59.587 41.667 0.00 0.00 37.07 3.24
2213 2217 4.715713 ACCTCCTTTCTGGTTTGTAAGTC 58.284 43.478 0.00 0.00 37.07 3.01
2214 2218 4.790718 ACCTCCTTTCTGGTTTGTAAGT 57.209 40.909 0.00 0.00 37.07 2.24
2215 2219 5.866207 ACTACCTCCTTTCTGGTTTGTAAG 58.134 41.667 0.00 0.00 37.74 2.34
2216 2220 5.899631 ACTACCTCCTTTCTGGTTTGTAA 57.100 39.130 0.00 0.00 37.74 2.41
2217 2221 6.080009 AGTACTACCTCCTTTCTGGTTTGTA 58.920 40.000 0.00 0.00 37.74 2.41
2218 2222 4.906060 AGTACTACCTCCTTTCTGGTTTGT 59.094 41.667 0.00 0.00 37.74 2.83
2219 2223 5.485209 AGTACTACCTCCTTTCTGGTTTG 57.515 43.478 0.00 0.00 37.74 2.93
2221 2225 9.585369 GTATATAGTACTACCTCCTTTCTGGTT 57.415 37.037 4.31 0.00 37.74 3.67
2222 2226 8.730948 TGTATATAGTACTACCTCCTTTCTGGT 58.269 37.037 4.31 0.00 40.12 4.00
2223 2227 9.756571 ATGTATATAGTACTACCTCCTTTCTGG 57.243 37.037 4.31 0.00 37.10 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.