Multiple sequence alignment - TraesCS1B01G460900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G460900 chr1B 100.000 2201 0 0 1 2201 674075719 674077919 0.000000e+00 4065.0
1 TraesCS1B01G460900 chr1B 81.456 1003 135 32 555 1547 674053458 674054419 0.000000e+00 774.0
2 TraesCS1B01G460900 chr1B 81.096 894 136 23 638 1523 674065485 674066353 0.000000e+00 684.0
3 TraesCS1B01G460900 chr1B 84.082 490 62 10 1 489 674053757 674054231 1.990000e-125 459.0
4 TraesCS1B01G460900 chr1B 95.349 172 7 1 1735 1906 38330462 38330292 2.780000e-69 272.0
5 TraesCS1B01G460900 chr1B 100.000 41 0 0 415 455 674076095 674076135 2.340000e-10 76.8
6 TraesCS1B01G460900 chr1B 100.000 41 0 0 377 417 674076133 674076173 2.340000e-10 76.8
7 TraesCS1B01G460900 chr1D 94.672 1708 66 14 1 1699 484113547 484115238 0.000000e+00 2627.0
8 TraesCS1B01G460900 chr1D 85.234 833 99 19 529 1349 484113195 484114015 0.000000e+00 835.0
9 TraesCS1B01G460900 chr1D 82.025 790 127 13 712 1494 484030225 484031006 0.000000e+00 658.0
10 TraesCS1B01G460900 chr1D 84.490 490 64 9 1 489 484004872 484005350 7.110000e-130 473.0
11 TraesCS1B01G460900 chr1D 81.911 492 73 11 1 489 484030390 484030868 3.400000e-108 401.0
12 TraesCS1B01G460900 chr1D 86.932 352 46 0 2 353 484114420 484114771 1.580000e-106 396.0
13 TraesCS1B01G460900 chr1D 97.115 208 4 2 1984 2190 484115733 484115939 1.250000e-92 350.0
14 TraesCS1B01G460900 chr1D 94.118 170 7 2 1735 1903 20238846 20239013 2.800000e-64 255.0
15 TraesCS1B01G460900 chr1D 87.079 178 12 4 2015 2186 484174195 484174367 8.020000e-45 191.0
16 TraesCS1B01G460900 chr1D 92.632 95 2 1 1903 1992 484115236 484115330 4.930000e-27 132.0
17 TraesCS1B01G460900 chr1D 88.298 94 4 4 1903 1995 484174044 484174131 2.990000e-19 106.0
18 TraesCS1B01G460900 chr1A 94.438 1708 71 13 1 1699 581255218 581256910 0.000000e+00 2606.0
19 TraesCS1B01G460900 chr1A 81.449 1035 157 22 522 1547 581205727 581206735 0.000000e+00 815.0
20 TraesCS1B01G460900 chr1A 84.034 833 111 18 529 1349 581254864 581255686 0.000000e+00 782.0
21 TraesCS1B01G460900 chr1A 81.950 482 71 8 2 480 581256091 581256559 5.700000e-106 394.0
22 TraesCS1B01G460900 chr1A 81.579 494 71 12 1 489 581206066 581206544 7.370000e-105 390.0
23 TraesCS1B01G460900 chr1A 86.957 345 44 1 1 345 581433600 581433943 9.530000e-104 387.0
24 TraesCS1B01G460900 chr1A 95.417 240 7 3 1961 2199 581257007 581257243 1.590000e-101 379.0
25 TraesCS1B01G460900 chr1A 91.139 79 2 1 1903 1976 581256908 581256986 3.870000e-18 102.0
26 TraesCS1B01G460900 chr3B 94.675 169 8 1 1735 1903 586382159 586382326 6.030000e-66 261.0
27 TraesCS1B01G460900 chr3B 91.667 180 13 1 1724 1903 605510055 605510232 4.690000e-62 248.0
28 TraesCS1B01G460900 chr2B 94.118 170 8 2 1735 1903 155149214 155149382 7.800000e-65 257.0
29 TraesCS1B01G460900 chr7B 93.605 172 9 1 1735 1906 414025121 414024952 2.800000e-64 255.0
30 TraesCS1B01G460900 chr6B 94.083 169 8 1 1735 1903 94347637 94347803 2.800000e-64 255.0
31 TraesCS1B01G460900 chr3D 93.143 175 10 2 1730 1903 85484672 85484845 2.800000e-64 255.0
32 TraesCS1B01G460900 chr5B 91.257 183 15 1 1724 1906 359412507 359412326 4.690000e-62 248.0
33 TraesCS1B01G460900 chr5B 71.820 511 126 16 1015 1521 648287360 648287856 1.770000e-26 130.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G460900 chr1B 674075719 674077919 2200 False 1406.2 4065 100.0000 1 2201 3 chr1B.!!$F3 2200
1 TraesCS1B01G460900 chr1B 674065485 674066353 868 False 684.0 684 81.0960 638 1523 1 chr1B.!!$F1 885
2 TraesCS1B01G460900 chr1B 674053458 674054419 961 False 616.5 774 82.7690 1 1547 2 chr1B.!!$F2 1546
3 TraesCS1B01G460900 chr1D 484113195 484115939 2744 False 868.0 2627 91.3170 1 2190 5 chr1D.!!$F4 2189
4 TraesCS1B01G460900 chr1D 484030225 484031006 781 False 529.5 658 81.9680 1 1494 2 chr1D.!!$F3 1493
5 TraesCS1B01G460900 chr1A 581254864 581257243 2379 False 852.6 2606 89.3956 1 2199 5 chr1A.!!$F3 2198
6 TraesCS1B01G460900 chr1A 581205727 581206735 1008 False 602.5 815 81.5140 1 1547 2 chr1A.!!$F2 1546

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
260 261 0.034089 GTTTGCTGCCCTAGGGACAT 60.034 55.0 33.21 0.0 37.5 3.06 F
314 315 0.038166 GGAACTGCATCCTCCACCAA 59.962 55.0 0.00 0.0 36.5 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1114 1139 0.181350 CTAGGGCAACAGGGTGGATC 59.819 60.0 0.0 0.0 39.74 3.36 R
1712 2614 0.250467 CGAAGGTATGATGCAGGGGG 60.250 60.0 0.0 0.0 0.00 5.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.826637 GCACAAGCTTGATGCCATT 57.173 47.368 32.50 5.49 44.23 3.16
22 23 1.355971 GCACAAGCTTGATGCCATTG 58.644 50.000 32.50 18.48 44.23 2.82
23 24 1.337447 GCACAAGCTTGATGCCATTGT 60.337 47.619 32.50 4.61 44.23 2.71
24 25 2.094597 GCACAAGCTTGATGCCATTGTA 60.095 45.455 32.50 0.00 44.23 2.41
25 26 3.429822 GCACAAGCTTGATGCCATTGTAT 60.430 43.478 32.50 2.52 44.23 2.29
26 27 4.357142 CACAAGCTTGATGCCATTGTATC 58.643 43.478 32.50 0.00 44.23 2.24
27 28 4.097437 CACAAGCTTGATGCCATTGTATCT 59.903 41.667 32.50 1.82 44.23 1.98
28 29 5.297527 CACAAGCTTGATGCCATTGTATCTA 59.702 40.000 32.50 0.00 44.23 1.98
29 30 6.016527 CACAAGCTTGATGCCATTGTATCTAT 60.017 38.462 32.50 0.70 44.23 1.98
30 31 7.173735 CACAAGCTTGATGCCATTGTATCTATA 59.826 37.037 32.50 0.00 44.23 1.31
31 32 7.886970 ACAAGCTTGATGCCATTGTATCTATAT 59.113 33.333 32.50 0.00 44.23 0.86
32 33 9.387257 CAAGCTTGATGCCATTGTATCTATATA 57.613 33.333 22.31 0.00 44.23 0.86
33 34 9.964354 AAGCTTGATGCCATTGTATCTATATAA 57.036 29.630 0.00 0.00 44.23 0.98
34 35 9.964354 AGCTTGATGCCATTGTATCTATATAAA 57.036 29.630 0.00 0.00 44.23 1.40
69 70 9.442062 TTTCTAGGATAAACCATAGACATACCA 57.558 33.333 0.00 0.00 42.04 3.25
70 71 8.651589 TCTAGGATAAACCATAGACATACCAG 57.348 38.462 0.00 0.00 42.04 4.00
71 72 6.115448 AGGATAAACCATAGACATACCAGC 57.885 41.667 0.00 0.00 42.04 4.85
72 73 4.929808 GGATAAACCATAGACATACCAGCG 59.070 45.833 0.00 0.00 38.79 5.18
73 74 5.279306 GGATAAACCATAGACATACCAGCGA 60.279 44.000 0.00 0.00 38.79 4.93
74 75 4.481368 AAACCATAGACATACCAGCGAA 57.519 40.909 0.00 0.00 0.00 4.70
75 76 4.481368 AACCATAGACATACCAGCGAAA 57.519 40.909 0.00 0.00 0.00 3.46
76 77 4.060038 ACCATAGACATACCAGCGAAAG 57.940 45.455 0.00 0.00 0.00 2.62
77 78 3.181465 ACCATAGACATACCAGCGAAAGG 60.181 47.826 0.00 0.00 0.00 3.11
78 79 3.069586 CCATAGACATACCAGCGAAAGGA 59.930 47.826 0.00 0.00 0.00 3.36
79 80 2.969628 AGACATACCAGCGAAAGGAG 57.030 50.000 0.00 0.00 0.00 3.69
80 81 2.180276 AGACATACCAGCGAAAGGAGT 58.820 47.619 0.00 0.00 0.00 3.85
81 82 3.362706 AGACATACCAGCGAAAGGAGTA 58.637 45.455 0.00 0.00 0.00 2.59
82 83 3.961408 AGACATACCAGCGAAAGGAGTAT 59.039 43.478 0.00 0.00 0.00 2.12
83 84 4.406003 AGACATACCAGCGAAAGGAGTATT 59.594 41.667 0.00 0.00 0.00 1.89
84 85 5.597182 AGACATACCAGCGAAAGGAGTATTA 59.403 40.000 0.00 0.00 0.00 0.98
85 86 5.598769 ACATACCAGCGAAAGGAGTATTAC 58.401 41.667 0.00 0.00 0.00 1.89
86 87 5.128171 ACATACCAGCGAAAGGAGTATTACA 59.872 40.000 0.00 0.00 0.00 2.41
87 88 4.755266 ACCAGCGAAAGGAGTATTACAT 57.245 40.909 0.00 0.00 0.00 2.29
88 89 5.864418 ACCAGCGAAAGGAGTATTACATA 57.136 39.130 0.00 0.00 0.00 2.29
89 90 5.844004 ACCAGCGAAAGGAGTATTACATAG 58.156 41.667 0.00 0.00 0.00 2.23
90 91 5.363005 ACCAGCGAAAGGAGTATTACATAGT 59.637 40.000 0.00 0.00 0.00 2.12
91 92 5.692204 CCAGCGAAAGGAGTATTACATAGTG 59.308 44.000 0.00 0.00 0.00 2.74
92 93 6.273825 CAGCGAAAGGAGTATTACATAGTGT 58.726 40.000 0.00 0.00 0.00 3.55
93 94 6.757010 CAGCGAAAGGAGTATTACATAGTGTT 59.243 38.462 0.00 0.00 0.00 3.32
94 95 6.979238 AGCGAAAGGAGTATTACATAGTGTTC 59.021 38.462 0.00 0.00 0.00 3.18
95 96 6.979238 GCGAAAGGAGTATTACATAGTGTTCT 59.021 38.462 0.00 0.00 0.00 3.01
96 97 7.167801 GCGAAAGGAGTATTACATAGTGTTCTC 59.832 40.741 0.00 0.00 0.00 2.87
97 98 8.407064 CGAAAGGAGTATTACATAGTGTTCTCT 58.593 37.037 0.00 0.00 0.00 3.10
100 101 8.694581 AGGAGTATTACATAGTGTTCTCTACC 57.305 38.462 0.00 0.00 0.00 3.18
101 102 8.280084 AGGAGTATTACATAGTGTTCTCTACCA 58.720 37.037 0.00 0.00 0.00 3.25
102 103 8.351461 GGAGTATTACATAGTGTTCTCTACCAC 58.649 40.741 0.00 0.00 0.00 4.16
103 104 9.122779 GAGTATTACATAGTGTTCTCTACCACT 57.877 37.037 0.00 0.00 0.00 4.00
104 105 9.122779 AGTATTACATAGTGTTCTCTACCACTC 57.877 37.037 0.00 0.00 0.00 3.51
105 106 9.122779 GTATTACATAGTGTTCTCTACCACTCT 57.877 37.037 0.00 0.00 0.00 3.24
106 107 7.627298 TTACATAGTGTTCTCTACCACTCTC 57.373 40.000 0.00 0.00 0.00 3.20
107 108 5.822204 ACATAGTGTTCTCTACCACTCTCT 58.178 41.667 0.00 0.00 0.00 3.10
108 109 5.650266 ACATAGTGTTCTCTACCACTCTCTG 59.350 44.000 0.00 0.00 0.00 3.35
109 110 4.107127 AGTGTTCTCTACCACTCTCTGT 57.893 45.455 0.00 0.00 0.00 3.41
110 111 3.823873 AGTGTTCTCTACCACTCTCTGTG 59.176 47.826 0.00 0.00 45.80 3.66
122 123 4.899352 ACTCTCTGTGAACTTAGGCAAT 57.101 40.909 0.00 0.00 0.00 3.56
123 124 4.573900 ACTCTCTGTGAACTTAGGCAATG 58.426 43.478 0.00 0.00 0.00 2.82
124 125 3.937706 CTCTCTGTGAACTTAGGCAATGG 59.062 47.826 0.00 0.00 0.00 3.16
125 126 2.421424 CTCTGTGAACTTAGGCAATGGC 59.579 50.000 0.00 0.00 40.13 4.40
126 127 2.161855 CTGTGAACTTAGGCAATGGCA 58.838 47.619 10.05 0.00 43.71 4.92
127 128 2.557924 CTGTGAACTTAGGCAATGGCAA 59.442 45.455 10.05 0.69 43.71 4.52
128 129 2.961741 TGTGAACTTAGGCAATGGCAAA 59.038 40.909 10.05 0.00 43.71 3.68
129 130 3.577848 TGTGAACTTAGGCAATGGCAAAT 59.422 39.130 10.05 0.00 43.71 2.32
130 131 4.769488 TGTGAACTTAGGCAATGGCAAATA 59.231 37.500 10.05 0.00 43.71 1.40
131 132 5.102313 GTGAACTTAGGCAATGGCAAATAC 58.898 41.667 10.05 0.00 43.71 1.89
132 133 5.016173 TGAACTTAGGCAATGGCAAATACT 58.984 37.500 10.05 0.00 43.71 2.12
133 134 6.094881 GTGAACTTAGGCAATGGCAAATACTA 59.905 38.462 10.05 0.00 43.71 1.82
134 135 6.318648 TGAACTTAGGCAATGGCAAATACTAG 59.681 38.462 10.05 0.00 43.71 2.57
135 136 4.580580 ACTTAGGCAATGGCAAATACTAGC 59.419 41.667 10.05 0.00 43.71 3.42
136 137 3.017048 AGGCAATGGCAAATACTAGCA 57.983 42.857 10.05 0.00 43.71 3.49
137 138 3.569491 AGGCAATGGCAAATACTAGCAT 58.431 40.909 10.05 0.00 43.71 3.79
138 139 3.571401 AGGCAATGGCAAATACTAGCATC 59.429 43.478 10.05 0.00 43.71 3.91
139 140 3.305608 GGCAATGGCAAATACTAGCATCC 60.306 47.826 0.58 0.00 43.71 3.51
140 141 3.571401 GCAATGGCAAATACTAGCATCCT 59.429 43.478 0.00 0.00 40.72 3.24
141 142 4.320788 GCAATGGCAAATACTAGCATCCTC 60.321 45.833 0.00 0.00 40.72 3.71
142 143 3.492102 TGGCAAATACTAGCATCCTCC 57.508 47.619 0.00 0.00 0.00 4.30
143 144 2.777114 TGGCAAATACTAGCATCCTCCA 59.223 45.455 0.00 0.00 0.00 3.86
144 145 3.201930 TGGCAAATACTAGCATCCTCCAA 59.798 43.478 0.00 0.00 0.00 3.53
145 146 3.817647 GGCAAATACTAGCATCCTCCAAG 59.182 47.826 0.00 0.00 0.00 3.61
146 147 4.455606 GCAAATACTAGCATCCTCCAAGT 58.544 43.478 0.00 0.00 0.00 3.16
147 148 4.513318 GCAAATACTAGCATCCTCCAAGTC 59.487 45.833 0.00 0.00 0.00 3.01
148 149 5.686124 GCAAATACTAGCATCCTCCAAGTCT 60.686 44.000 0.00 0.00 0.00 3.24
149 150 6.352516 CAAATACTAGCATCCTCCAAGTCTT 58.647 40.000 0.00 0.00 0.00 3.01
150 151 5.799827 ATACTAGCATCCTCCAAGTCTTC 57.200 43.478 0.00 0.00 0.00 2.87
151 152 3.445008 ACTAGCATCCTCCAAGTCTTCA 58.555 45.455 0.00 0.00 0.00 3.02
152 153 4.036518 ACTAGCATCCTCCAAGTCTTCAT 58.963 43.478 0.00 0.00 0.00 2.57
153 154 4.472833 ACTAGCATCCTCCAAGTCTTCATT 59.527 41.667 0.00 0.00 0.00 2.57
154 155 3.618351 AGCATCCTCCAAGTCTTCATTG 58.382 45.455 0.00 0.00 0.00 2.82
155 156 3.009916 AGCATCCTCCAAGTCTTCATTGT 59.990 43.478 0.00 0.00 0.00 2.71
156 157 3.760684 GCATCCTCCAAGTCTTCATTGTT 59.239 43.478 0.00 0.00 0.00 2.83
157 158 4.219288 GCATCCTCCAAGTCTTCATTGTTT 59.781 41.667 0.00 0.00 0.00 2.83
158 159 5.279156 GCATCCTCCAAGTCTTCATTGTTTT 60.279 40.000 0.00 0.00 0.00 2.43
159 160 6.739565 GCATCCTCCAAGTCTTCATTGTTTTT 60.740 38.462 0.00 0.00 0.00 1.94
160 161 7.523709 GCATCCTCCAAGTCTTCATTGTTTTTA 60.524 37.037 0.00 0.00 0.00 1.52
161 162 8.526147 CATCCTCCAAGTCTTCATTGTTTTTAT 58.474 33.333 0.00 0.00 0.00 1.40
162 163 8.110860 TCCTCCAAGTCTTCATTGTTTTTATC 57.889 34.615 0.00 0.00 0.00 1.75
163 164 7.723616 TCCTCCAAGTCTTCATTGTTTTTATCA 59.276 33.333 0.00 0.00 0.00 2.15
164 165 8.526147 CCTCCAAGTCTTCATTGTTTTTATCAT 58.474 33.333 0.00 0.00 0.00 2.45
165 166 9.918630 CTCCAAGTCTTCATTGTTTTTATCATT 57.081 29.630 0.00 0.00 0.00 2.57
166 167 9.695526 TCCAAGTCTTCATTGTTTTTATCATTG 57.304 29.630 0.00 0.00 0.00 2.82
167 168 8.437742 CCAAGTCTTCATTGTTTTTATCATTGC 58.562 33.333 0.00 0.00 0.00 3.56
168 169 7.801547 AGTCTTCATTGTTTTTATCATTGCG 57.198 32.000 0.00 0.00 0.00 4.85
169 170 6.308766 AGTCTTCATTGTTTTTATCATTGCGC 59.691 34.615 0.00 0.00 0.00 6.09
170 171 6.089283 GTCTTCATTGTTTTTATCATTGCGCA 59.911 34.615 5.66 5.66 0.00 6.09
171 172 6.644181 TCTTCATTGTTTTTATCATTGCGCAA 59.356 30.769 27.24 27.24 0.00 4.85
172 173 6.392353 TCATTGTTTTTATCATTGCGCAAG 57.608 33.333 28.62 19.22 43.44 4.01
173 174 5.925397 TCATTGTTTTTATCATTGCGCAAGT 59.075 32.000 28.62 18.23 41.68 3.16
174 175 5.820926 TTGTTTTTATCATTGCGCAAGTC 57.179 34.783 28.62 10.29 41.68 3.01
175 176 5.119931 TGTTTTTATCATTGCGCAAGTCT 57.880 34.783 28.62 16.41 41.68 3.24
176 177 4.916831 TGTTTTTATCATTGCGCAAGTCTG 59.083 37.500 28.62 21.12 41.68 3.51
177 178 2.830772 TTATCATTGCGCAAGTCTGC 57.169 45.000 28.62 0.00 45.75 4.26
189 190 4.533225 GCAAGTCTGCTTACTCATGATG 57.467 45.455 0.00 0.00 45.74 3.07
190 191 4.186926 GCAAGTCTGCTTACTCATGATGA 58.813 43.478 0.00 0.00 45.74 2.92
191 192 4.815308 GCAAGTCTGCTTACTCATGATGAT 59.185 41.667 0.00 0.00 45.74 2.45
192 193 5.277393 GCAAGTCTGCTTACTCATGATGATG 60.277 44.000 0.00 0.00 45.74 3.07
193 194 4.958509 AGTCTGCTTACTCATGATGATGG 58.041 43.478 0.00 0.00 0.00 3.51
194 195 3.497640 GTCTGCTTACTCATGATGATGGC 59.502 47.826 0.00 0.00 0.00 4.40
195 196 3.135167 TCTGCTTACTCATGATGATGGCA 59.865 43.478 0.00 3.92 0.00 4.92
196 197 3.881089 CTGCTTACTCATGATGATGGCAA 59.119 43.478 0.00 0.00 0.00 4.52
197 198 3.628942 TGCTTACTCATGATGATGGCAAC 59.371 43.478 0.00 0.00 0.00 4.17
208 209 2.817834 TGGCAACACCGATAGCGC 60.818 61.111 0.00 0.00 46.17 5.92
209 210 2.817834 GGCAACACCGATAGCGCA 60.818 61.111 11.47 0.00 35.83 6.09
210 211 2.703409 GCAACACCGATAGCGCAG 59.297 61.111 11.47 0.00 35.83 5.18
211 212 2.813179 GCAACACCGATAGCGCAGG 61.813 63.158 11.47 10.07 35.83 4.85
212 213 2.511600 AACACCGATAGCGCAGGC 60.512 61.111 11.47 0.00 40.37 4.85
213 214 3.309436 AACACCGATAGCGCAGGCA 62.309 57.895 11.47 0.00 43.41 4.75
214 215 2.963854 CACCGATAGCGCAGGCAG 60.964 66.667 11.47 0.00 43.41 4.85
215 216 4.899239 ACCGATAGCGCAGGCAGC 62.899 66.667 11.47 0.00 43.41 5.25
232 233 2.839098 CCGGCAGGCTTATGGGAT 59.161 61.111 0.00 0.00 0.00 3.85
233 234 2.066340 CCGGCAGGCTTATGGGATA 58.934 57.895 0.00 0.00 0.00 2.59
234 235 0.321653 CCGGCAGGCTTATGGGATAC 60.322 60.000 0.00 0.00 0.00 2.24
235 236 0.396435 CGGCAGGCTTATGGGATACA 59.604 55.000 0.00 0.00 39.74 2.29
236 237 1.202758 CGGCAGGCTTATGGGATACAA 60.203 52.381 0.00 0.00 39.74 2.41
237 238 2.553028 CGGCAGGCTTATGGGATACAAT 60.553 50.000 0.00 0.00 39.74 2.71
238 239 3.084786 GGCAGGCTTATGGGATACAATC 58.915 50.000 0.00 0.00 39.74 2.67
250 251 3.427161 GATACAATCCAGTTTGCTGCC 57.573 47.619 0.00 0.00 41.26 4.85
251 252 1.544724 TACAATCCAGTTTGCTGCCC 58.455 50.000 0.00 0.00 41.26 5.36
252 253 0.178953 ACAATCCAGTTTGCTGCCCT 60.179 50.000 0.00 0.00 41.26 5.19
253 254 1.075374 ACAATCCAGTTTGCTGCCCTA 59.925 47.619 0.00 0.00 41.26 3.53
254 255 1.747355 CAATCCAGTTTGCTGCCCTAG 59.253 52.381 0.00 0.00 41.26 3.02
255 256 0.257039 ATCCAGTTTGCTGCCCTAGG 59.743 55.000 0.06 0.06 41.26 3.02
256 257 1.379044 CCAGTTTGCTGCCCTAGGG 60.379 63.158 24.89 24.89 41.26 3.53
257 258 1.685224 CAGTTTGCTGCCCTAGGGA 59.315 57.895 33.21 15.40 35.77 4.20
258 259 0.678048 CAGTTTGCTGCCCTAGGGAC 60.678 60.000 33.21 22.13 35.77 4.46
259 260 1.133809 AGTTTGCTGCCCTAGGGACA 61.134 55.000 33.21 25.31 37.50 4.02
260 261 0.034089 GTTTGCTGCCCTAGGGACAT 60.034 55.000 33.21 0.00 37.50 3.06
261 262 0.255890 TTTGCTGCCCTAGGGACATC 59.744 55.000 33.21 22.37 37.50 3.06
262 263 0.621571 TTGCTGCCCTAGGGACATCT 60.622 55.000 33.21 0.00 37.50 2.90
263 264 0.264657 TGCTGCCCTAGGGACATCTA 59.735 55.000 33.21 13.82 37.50 1.98
264 265 0.682292 GCTGCCCTAGGGACATCTAC 59.318 60.000 33.21 12.25 37.50 2.59
265 266 1.759562 GCTGCCCTAGGGACATCTACT 60.760 57.143 33.21 0.00 37.50 2.57
266 267 1.967066 CTGCCCTAGGGACATCTACTG 59.033 57.143 33.21 11.58 37.50 2.74
267 268 1.291033 TGCCCTAGGGACATCTACTGT 59.709 52.381 33.21 0.00 42.15 3.55
268 269 2.292918 TGCCCTAGGGACATCTACTGTT 60.293 50.000 33.21 0.00 38.54 3.16
269 270 2.103263 GCCCTAGGGACATCTACTGTTG 59.897 54.545 33.21 0.00 38.54 3.33
270 271 3.375699 CCCTAGGGACATCTACTGTTGT 58.624 50.000 24.99 0.00 38.54 3.32
271 272 3.133003 CCCTAGGGACATCTACTGTTGTG 59.867 52.174 24.99 0.00 38.54 3.33
272 273 3.133003 CCTAGGGACATCTACTGTTGTGG 59.867 52.174 0.00 0.00 38.54 4.17
273 274 1.909302 AGGGACATCTACTGTTGTGGG 59.091 52.381 0.00 0.00 38.54 4.61
274 275 1.628846 GGGACATCTACTGTTGTGGGT 59.371 52.381 0.00 0.00 38.54 4.51
275 276 2.039879 GGGACATCTACTGTTGTGGGTT 59.960 50.000 0.00 0.00 38.54 4.11
276 277 3.497942 GGGACATCTACTGTTGTGGGTTT 60.498 47.826 0.00 0.00 38.54 3.27
277 278 3.502211 GGACATCTACTGTTGTGGGTTTG 59.498 47.826 0.00 0.00 38.54 2.93
278 279 3.486383 ACATCTACTGTTGTGGGTTTGG 58.514 45.455 0.00 0.00 32.90 3.28
279 280 1.975660 TCTACTGTTGTGGGTTTGGC 58.024 50.000 0.00 0.00 0.00 4.52
280 281 0.591170 CTACTGTTGTGGGTTTGGCG 59.409 55.000 0.00 0.00 0.00 5.69
281 282 0.820074 TACTGTTGTGGGTTTGGCGG 60.820 55.000 0.00 0.00 0.00 6.13
282 283 2.043852 TGTTGTGGGTTTGGCGGT 60.044 55.556 0.00 0.00 0.00 5.68
283 284 2.348605 CTGTTGTGGGTTTGGCGGTG 62.349 60.000 0.00 0.00 0.00 4.94
284 285 2.043852 TTGTGGGTTTGGCGGTGT 60.044 55.556 0.00 0.00 0.00 4.16
285 286 2.418910 TTGTGGGTTTGGCGGTGTG 61.419 57.895 0.00 0.00 0.00 3.82
286 287 2.517402 GTGGGTTTGGCGGTGTGA 60.517 61.111 0.00 0.00 0.00 3.58
287 288 1.901464 GTGGGTTTGGCGGTGTGAT 60.901 57.895 0.00 0.00 0.00 3.06
288 289 1.900981 TGGGTTTGGCGGTGTGATG 60.901 57.895 0.00 0.00 0.00 3.07
289 290 2.635443 GGGTTTGGCGGTGTGATGG 61.635 63.158 0.00 0.00 0.00 3.51
290 291 2.258286 GTTTGGCGGTGTGATGGC 59.742 61.111 0.00 0.00 0.00 4.40
294 295 2.755469 GGCGGTGTGATGGCCAAT 60.755 61.111 10.96 0.00 46.13 3.16
295 296 2.491152 GCGGTGTGATGGCCAATG 59.509 61.111 10.96 0.00 0.00 2.82
296 297 3.067480 GCGGTGTGATGGCCAATGG 62.067 63.158 10.96 0.00 0.00 3.16
297 298 1.378382 CGGTGTGATGGCCAATGGA 60.378 57.895 10.96 0.00 0.00 3.41
298 299 0.964860 CGGTGTGATGGCCAATGGAA 60.965 55.000 10.96 0.00 0.00 3.53
299 300 0.532115 GGTGTGATGGCCAATGGAAC 59.468 55.000 10.96 4.85 0.00 3.62
300 301 1.549203 GTGTGATGGCCAATGGAACT 58.451 50.000 10.96 0.00 0.00 3.01
301 302 1.203052 GTGTGATGGCCAATGGAACTG 59.797 52.381 10.96 0.00 0.00 3.16
302 303 0.174162 GTGATGGCCAATGGAACTGC 59.826 55.000 10.96 0.00 0.00 4.40
303 304 0.251698 TGATGGCCAATGGAACTGCA 60.252 50.000 10.96 0.00 0.00 4.41
304 305 1.117150 GATGGCCAATGGAACTGCAT 58.883 50.000 10.96 0.00 0.00 3.96
305 306 1.068127 GATGGCCAATGGAACTGCATC 59.932 52.381 10.96 0.00 0.00 3.91
306 307 0.971959 TGGCCAATGGAACTGCATCC 60.972 55.000 0.61 0.00 40.10 3.51
307 308 0.685458 GGCCAATGGAACTGCATCCT 60.685 55.000 2.05 0.00 40.35 3.24
308 309 0.743097 GCCAATGGAACTGCATCCTC 59.257 55.000 2.05 0.00 40.35 3.71
309 310 1.396653 CCAATGGAACTGCATCCTCC 58.603 55.000 7.83 5.09 40.35 4.30
310 311 1.341285 CCAATGGAACTGCATCCTCCA 60.341 52.381 12.47 12.47 43.26 3.86
311 312 1.747355 CAATGGAACTGCATCCTCCAC 59.253 52.381 12.37 0.00 41.95 4.02
312 313 0.257039 ATGGAACTGCATCCTCCACC 59.743 55.000 12.37 0.00 41.95 4.61
313 314 1.133181 TGGAACTGCATCCTCCACCA 61.133 55.000 7.83 0.00 40.35 4.17
314 315 0.038166 GGAACTGCATCCTCCACCAA 59.962 55.000 0.00 0.00 36.50 3.67
315 316 1.457346 GAACTGCATCCTCCACCAAG 58.543 55.000 0.00 0.00 0.00 3.61
316 317 0.610232 AACTGCATCCTCCACCAAGC 60.610 55.000 0.00 0.00 0.00 4.01
317 318 1.751927 CTGCATCCTCCACCAAGCC 60.752 63.158 0.00 0.00 0.00 4.35
318 319 2.207501 CTGCATCCTCCACCAAGCCT 62.208 60.000 0.00 0.00 0.00 4.58
319 320 1.000396 GCATCCTCCACCAAGCCTT 60.000 57.895 0.00 0.00 0.00 4.35
320 321 1.318158 GCATCCTCCACCAAGCCTTG 61.318 60.000 0.00 0.00 0.00 3.61
321 322 0.329261 CATCCTCCACCAAGCCTTGA 59.671 55.000 5.89 0.00 0.00 3.02
322 323 1.064166 CATCCTCCACCAAGCCTTGAT 60.064 52.381 5.89 0.00 0.00 2.57
323 324 1.965414 TCCTCCACCAAGCCTTGATA 58.035 50.000 5.89 0.00 0.00 2.15
324 325 1.839994 TCCTCCACCAAGCCTTGATAG 59.160 52.381 5.89 0.00 0.00 2.08
325 326 1.133976 CCTCCACCAAGCCTTGATAGG 60.134 57.143 5.89 4.82 45.02 2.57
326 327 1.561542 CTCCACCAAGCCTTGATAGGT 59.438 52.381 5.89 0.00 44.00 3.08
328 329 1.755179 CACCAAGCCTTGATAGGTGG 58.245 55.000 5.89 0.00 44.55 4.61
329 330 1.004745 CACCAAGCCTTGATAGGTGGT 59.995 52.381 5.89 0.00 46.60 4.16
330 331 1.710809 ACCAAGCCTTGATAGGTGGTT 59.289 47.619 5.89 0.00 44.49 3.67
331 332 2.110011 ACCAAGCCTTGATAGGTGGTTT 59.890 45.455 5.89 0.00 44.49 3.27
332 333 2.755103 CCAAGCCTTGATAGGTGGTTTC 59.245 50.000 5.89 0.00 44.00 2.78
333 334 3.420893 CAAGCCTTGATAGGTGGTTTCA 58.579 45.455 0.00 0.00 44.00 2.69
334 335 4.019174 CAAGCCTTGATAGGTGGTTTCAT 58.981 43.478 0.00 0.00 44.00 2.57
335 336 4.322057 AGCCTTGATAGGTGGTTTCATT 57.678 40.909 0.00 0.00 44.00 2.57
336 337 4.273318 AGCCTTGATAGGTGGTTTCATTC 58.727 43.478 0.00 0.00 44.00 2.67
337 338 4.018050 AGCCTTGATAGGTGGTTTCATTCT 60.018 41.667 0.00 0.00 44.00 2.40
338 339 4.336713 GCCTTGATAGGTGGTTTCATTCTC 59.663 45.833 0.00 0.00 44.00 2.87
339 340 4.884164 CCTTGATAGGTGGTTTCATTCTCC 59.116 45.833 0.00 0.00 36.74 3.71
340 341 5.339530 CCTTGATAGGTGGTTTCATTCTCCT 60.340 44.000 0.00 0.00 36.74 3.69
341 342 5.359194 TGATAGGTGGTTTCATTCTCCTC 57.641 43.478 0.00 0.00 0.00 3.71
342 343 4.164221 TGATAGGTGGTTTCATTCTCCTCC 59.836 45.833 0.00 0.00 35.77 4.30
343 344 1.279271 AGGTGGTTTCATTCTCCTCCG 59.721 52.381 0.00 0.00 39.14 4.63
344 345 1.278127 GGTGGTTTCATTCTCCTCCGA 59.722 52.381 0.00 0.00 0.00 4.55
345 346 2.622436 GTGGTTTCATTCTCCTCCGAG 58.378 52.381 0.00 0.00 37.48 4.63
346 347 1.066143 TGGTTTCATTCTCCTCCGAGC 60.066 52.381 0.00 0.00 35.94 5.03
347 348 1.208293 GGTTTCATTCTCCTCCGAGCT 59.792 52.381 0.00 0.00 35.94 4.09
348 349 2.431057 GGTTTCATTCTCCTCCGAGCTA 59.569 50.000 0.00 0.00 35.94 3.32
349 350 3.070302 GGTTTCATTCTCCTCCGAGCTAT 59.930 47.826 0.00 0.00 35.94 2.97
350 351 4.281182 GGTTTCATTCTCCTCCGAGCTATA 59.719 45.833 0.00 0.00 35.94 1.31
351 352 5.221461 GGTTTCATTCTCCTCCGAGCTATAA 60.221 44.000 0.00 0.00 35.94 0.98
352 353 5.713792 TTCATTCTCCTCCGAGCTATAAG 57.286 43.478 0.00 0.00 35.94 1.73
353 354 4.730966 TCATTCTCCTCCGAGCTATAAGT 58.269 43.478 0.00 0.00 35.94 2.24
354 355 5.141182 TCATTCTCCTCCGAGCTATAAGTT 58.859 41.667 0.00 0.00 35.94 2.66
355 356 4.920640 TTCTCCTCCGAGCTATAAGTTG 57.079 45.455 0.00 0.00 35.94 3.16
356 357 3.899726 TCTCCTCCGAGCTATAAGTTGT 58.100 45.455 0.00 0.00 35.94 3.32
357 358 3.632604 TCTCCTCCGAGCTATAAGTTGTG 59.367 47.826 0.00 0.00 35.94 3.33
358 359 3.362706 TCCTCCGAGCTATAAGTTGTGT 58.637 45.455 0.00 0.00 0.00 3.72
359 360 3.767673 TCCTCCGAGCTATAAGTTGTGTT 59.232 43.478 0.00 0.00 0.00 3.32
360 361 3.865745 CCTCCGAGCTATAAGTTGTGTTG 59.134 47.826 0.00 0.00 0.00 3.33
361 362 4.495422 CTCCGAGCTATAAGTTGTGTTGT 58.505 43.478 0.00 0.00 0.00 3.32
362 363 4.890088 TCCGAGCTATAAGTTGTGTTGTT 58.110 39.130 0.00 0.00 0.00 2.83
363 364 5.302360 TCCGAGCTATAAGTTGTGTTGTTT 58.698 37.500 0.00 0.00 0.00 2.83
364 365 5.761234 TCCGAGCTATAAGTTGTGTTGTTTT 59.239 36.000 0.00 0.00 0.00 2.43
365 366 6.261381 TCCGAGCTATAAGTTGTGTTGTTTTT 59.739 34.615 0.00 0.00 0.00 1.94
366 367 6.577427 CCGAGCTATAAGTTGTGTTGTTTTTC 59.423 38.462 0.00 0.00 0.00 2.29
367 368 7.129622 CGAGCTATAAGTTGTGTTGTTTTTCA 58.870 34.615 0.00 0.00 0.00 2.69
368 369 7.803189 CGAGCTATAAGTTGTGTTGTTTTTCAT 59.197 33.333 0.00 0.00 0.00 2.57
474 475 9.190317 AGCTATTTTTCTAATAAAAGTGGGAGG 57.810 33.333 0.00 0.00 31.14 4.30
475 476 9.185680 GCTATTTTTCTAATAAAAGTGGGAGGA 57.814 33.333 0.00 0.00 31.14 3.71
478 479 9.997172 ATTTTTCTAATAAAAGTGGGAGGAGAT 57.003 29.630 0.00 0.00 31.14 2.75
479 480 9.822727 TTTTTCTAATAAAAGTGGGAGGAGATT 57.177 29.630 0.00 0.00 0.00 2.40
480 481 9.822727 TTTTCTAATAAAAGTGGGAGGAGATTT 57.177 29.630 0.00 0.00 0.00 2.17
481 482 9.822727 TTTCTAATAAAAGTGGGAGGAGATTTT 57.177 29.630 0.00 0.00 0.00 1.82
482 483 9.822727 TTCTAATAAAAGTGGGAGGAGATTTTT 57.177 29.630 0.00 0.00 0.00 1.94
508 509 8.783833 ATATATTACCTGTCTCAATGCACATC 57.216 34.615 0.00 0.00 0.00 3.06
509 510 4.558226 TTACCTGTCTCAATGCACATCT 57.442 40.909 0.00 0.00 0.00 2.90
510 511 2.983229 ACCTGTCTCAATGCACATCTC 58.017 47.619 0.00 0.00 0.00 2.75
511 512 2.570752 ACCTGTCTCAATGCACATCTCT 59.429 45.455 0.00 0.00 0.00 3.10
512 513 3.196463 CCTGTCTCAATGCACATCTCTC 58.804 50.000 0.00 0.00 0.00 3.20
513 514 3.118702 CCTGTCTCAATGCACATCTCTCT 60.119 47.826 0.00 0.00 0.00 3.10
514 515 3.858247 TGTCTCAATGCACATCTCTCTG 58.142 45.455 0.00 0.00 0.00 3.35
515 516 3.260128 TGTCTCAATGCACATCTCTCTGT 59.740 43.478 0.00 0.00 0.00 3.41
516 517 3.864583 GTCTCAATGCACATCTCTCTGTC 59.135 47.826 0.00 0.00 0.00 3.51
517 518 3.768215 TCTCAATGCACATCTCTCTGTCT 59.232 43.478 0.00 0.00 0.00 3.41
518 519 4.222366 TCTCAATGCACATCTCTCTGTCTT 59.778 41.667 0.00 0.00 0.00 3.01
519 520 4.251268 TCAATGCACATCTCTCTGTCTTG 58.749 43.478 0.00 0.00 0.00 3.02
520 521 4.020839 TCAATGCACATCTCTCTGTCTTGA 60.021 41.667 0.00 0.00 0.00 3.02
521 522 3.309961 TGCACATCTCTCTGTCTTGAC 57.690 47.619 0.00 0.00 0.00 3.18
522 523 2.629617 TGCACATCTCTCTGTCTTGACA 59.370 45.455 3.32 3.32 0.00 3.58
523 524 3.070015 TGCACATCTCTCTGTCTTGACAA 59.930 43.478 4.95 0.00 0.00 3.18
524 525 3.679025 GCACATCTCTCTGTCTTGACAAG 59.321 47.826 9.03 9.03 0.00 3.16
525 526 4.560311 GCACATCTCTCTGTCTTGACAAGA 60.560 45.833 13.99 13.99 34.51 3.02
548 549 3.430453 CCAAAAGTTGGCATCCCTTAGA 58.570 45.455 0.00 0.00 45.17 2.10
549 550 4.026052 CCAAAAGTTGGCATCCCTTAGAT 58.974 43.478 0.00 0.00 45.17 1.98
550 551 5.200483 CCAAAAGTTGGCATCCCTTAGATA 58.800 41.667 0.00 0.00 45.17 1.98
551 552 5.835280 CCAAAAGTTGGCATCCCTTAGATAT 59.165 40.000 0.00 0.00 45.17 1.63
552 553 6.324770 CCAAAAGTTGGCATCCCTTAGATATT 59.675 38.462 0.00 0.00 45.17 1.28
558 559 4.202461 TGGCATCCCTTAGATATTGTGTCC 60.202 45.833 0.00 0.00 32.37 4.02
643 649 7.349859 TCCAACATACCCTAAATACAAGAGGAT 59.650 37.037 0.00 0.00 31.45 3.24
649 655 6.494059 ACCCTAAATACAAGAGGATTTTGCT 58.506 36.000 0.00 0.00 31.45 3.91
661 667 5.187772 AGAGGATTTTGCTTGGTTAATTCCC 59.812 40.000 0.00 0.00 0.00 3.97
708 714 8.953990 GTGGATTTGTTTTTATATCGAATTCGG 58.046 33.333 26.47 9.26 40.29 4.30
716 722 2.197792 TATCGAATTCGGTGGTCACG 57.802 50.000 26.47 0.00 40.29 4.35
725 734 2.103042 GGTGGTCACGAGATGCAGC 61.103 63.158 0.00 0.00 0.00 5.25
879 899 8.792830 TCTGTTTCAGTGGAATTTATTAGGAG 57.207 34.615 0.00 0.00 31.93 3.69
885 905 7.577303 TCAGTGGAATTTATTAGGAGAAGCAT 58.423 34.615 0.00 0.00 0.00 3.79
941 966 2.421751 TTTCTTGGACCAAACACGGA 57.578 45.000 8.59 0.00 0.00 4.69
942 967 1.961793 TTCTTGGACCAAACACGGAG 58.038 50.000 8.59 0.00 0.00 4.63
959 984 3.024547 CGGAGATACCAGTGAAAGGAGA 58.975 50.000 0.00 0.00 38.90 3.71
975 1000 6.149973 TGAAAGGAGAATTGCATAGTGTTCTG 59.850 38.462 0.00 0.00 31.51 3.02
991 1016 2.724977 TCTGTACCGCTCTTTGTGAG 57.275 50.000 0.00 0.00 45.33 3.51
1011 1036 6.030228 GTGAGCTTAGACAATGGCAAATAAC 58.970 40.000 0.00 0.00 0.00 1.89
1013 1038 6.208402 TGAGCTTAGACAATGGCAAATAACAA 59.792 34.615 0.00 0.00 0.00 2.83
1060 1085 2.602211 CTCATCGCACAAGTCTGCTTAG 59.398 50.000 0.00 0.00 34.77 2.18
1074 1099 2.812591 CTGCTTAGTCATGATGATGGCC 59.187 50.000 0.00 0.00 34.42 5.36
1076 1101 3.181437 TGCTTAGTCATGATGATGGCCAT 60.181 43.478 20.96 20.96 34.42 4.40
1077 1102 3.190744 GCTTAGTCATGATGATGGCCATG 59.809 47.826 26.56 9.57 40.97 3.66
1138 1163 2.998949 CCTGTTGCCCTAGGGACC 59.001 66.667 33.21 17.57 37.50 4.46
1139 1164 2.680370 CCTGTTGCCCTAGGGACCC 61.680 68.421 33.21 17.20 37.50 4.46
1159 1184 3.292159 GGTGTTGTGGGTTCGGCC 61.292 66.667 0.00 0.00 0.00 6.13
1181 1206 1.838112 GTGATGGCCAATGGAACTGA 58.162 50.000 10.96 0.00 0.00 3.41
1211 1236 4.704540 CACCAAGCCTTGATATGTGGTTTA 59.295 41.667 5.89 0.00 37.26 2.01
1222 1247 7.206789 TGATATGTGGTTTAATTCTCCTCCA 57.793 36.000 0.00 0.00 0.00 3.86
1259 1284 3.252215 TCCTACAAAATGTGCTTCAACGG 59.748 43.478 0.00 0.00 0.00 4.44
1260 1285 3.004315 CCTACAAAATGTGCTTCAACGGT 59.996 43.478 0.00 0.00 0.00 4.83
1262 1287 2.126467 CAAAATGTGCTTCAACGGTGG 58.874 47.619 0.00 0.00 0.00 4.61
1307 1333 7.754069 TTTGTGTTGCTAGTTTCAAGAAATG 57.246 32.000 0.00 0.00 32.36 2.32
1308 1334 6.691754 TGTGTTGCTAGTTTCAAGAAATGA 57.308 33.333 0.00 0.00 35.85 2.57
1365 2264 7.093552 GGAGGAGATTGCTATCTATCTTGCTTA 60.094 40.741 10.76 0.00 41.23 3.09
1375 2274 4.842574 TCTATCTTGCTTACAATGTGCCA 58.157 39.130 0.00 0.00 34.61 4.92
1399 2300 5.812127 ACAAAGAGATTCAAAAGTGTTTGCC 59.188 36.000 0.00 0.00 43.30 4.52
1405 2306 5.761234 AGATTCAAAAGTGTTTGCCGTAGTA 59.239 36.000 0.00 0.00 43.30 1.82
1637 2538 4.483476 AGTGTTATTCGCACAAGGTTTC 57.517 40.909 0.00 0.00 39.17 2.78
1647 2549 2.418609 GCACAAGGTTTCTTTTGGCAGT 60.419 45.455 0.00 0.00 32.80 4.40
1701 2603 5.924475 AAAAATCGTTCAAGAGTCGACAT 57.076 34.783 19.50 2.44 36.46 3.06
1703 2605 7.596749 AAAAATCGTTCAAGAGTCGACATAT 57.403 32.000 19.50 0.00 36.46 1.78
1704 2606 8.697846 AAAAATCGTTCAAGAGTCGACATATA 57.302 30.769 19.50 0.00 36.46 0.86
1705 2607 7.916128 AAATCGTTCAAGAGTCGACATATAG 57.084 36.000 19.50 3.54 36.46 1.31
1706 2608 6.862711 ATCGTTCAAGAGTCGACATATAGA 57.137 37.500 19.50 6.00 36.46 1.98
1707 2609 6.862711 TCGTTCAAGAGTCGACATATAGAT 57.137 37.500 19.50 0.00 0.00 1.98
1708 2610 7.260558 TCGTTCAAGAGTCGACATATAGATT 57.739 36.000 19.50 0.00 0.00 2.40
1709 2611 8.374327 TCGTTCAAGAGTCGACATATAGATTA 57.626 34.615 19.50 0.00 0.00 1.75
1710 2612 9.000486 TCGTTCAAGAGTCGACATATAGATTAT 58.000 33.333 19.50 0.00 0.00 1.28
1711 2613 9.056306 CGTTCAAGAGTCGACATATAGATTATG 57.944 37.037 19.50 2.24 0.00 1.90
1712 2614 8.855279 GTTCAAGAGTCGACATATAGATTATGC 58.145 37.037 19.50 0.00 0.00 3.14
1713 2615 7.539436 TCAAGAGTCGACATATAGATTATGCC 58.461 38.462 19.50 0.00 0.00 4.40
1714 2616 6.458232 AGAGTCGACATATAGATTATGCCC 57.542 41.667 19.50 0.00 0.00 5.36
1715 2617 5.361285 AGAGTCGACATATAGATTATGCCCC 59.639 44.000 19.50 0.00 0.00 5.80
1716 2618 4.406003 AGTCGACATATAGATTATGCCCCC 59.594 45.833 19.50 0.00 0.00 5.40
1717 2619 4.406003 GTCGACATATAGATTATGCCCCCT 59.594 45.833 11.55 0.00 0.00 4.79
1718 2620 4.405680 TCGACATATAGATTATGCCCCCTG 59.594 45.833 0.00 0.00 0.00 4.45
1719 2621 4.455606 GACATATAGATTATGCCCCCTGC 58.544 47.826 0.00 0.00 41.77 4.85
1728 2630 3.255032 GCCCCCTGCATCATACCT 58.745 61.111 0.00 0.00 40.77 3.08
1729 2631 1.538666 GCCCCCTGCATCATACCTT 59.461 57.895 0.00 0.00 40.77 3.50
1730 2632 0.538287 GCCCCCTGCATCATACCTTC 60.538 60.000 0.00 0.00 40.77 3.46
1731 2633 0.250467 CCCCCTGCATCATACCTTCG 60.250 60.000 0.00 0.00 0.00 3.79
1732 2634 0.469917 CCCCTGCATCATACCTTCGT 59.530 55.000 0.00 0.00 0.00 3.85
1733 2635 1.134098 CCCCTGCATCATACCTTCGTT 60.134 52.381 0.00 0.00 0.00 3.85
1734 2636 2.643551 CCCTGCATCATACCTTCGTTT 58.356 47.619 0.00 0.00 0.00 3.60
1735 2637 2.355756 CCCTGCATCATACCTTCGTTTG 59.644 50.000 0.00 0.00 0.00 2.93
1736 2638 3.270027 CCTGCATCATACCTTCGTTTGA 58.730 45.455 0.00 0.00 34.93 2.69
1737 2639 3.879295 CCTGCATCATACCTTCGTTTGAT 59.121 43.478 0.00 0.00 40.15 2.57
1740 2642 4.214980 CATCATACCTTCGTTTGATGCC 57.785 45.455 9.65 0.00 45.34 4.40
1741 2643 2.639065 TCATACCTTCGTTTGATGCCC 58.361 47.619 0.00 0.00 0.00 5.36
1742 2644 1.676006 CATACCTTCGTTTGATGCCCC 59.324 52.381 0.00 0.00 0.00 5.80
1743 2645 0.988832 TACCTTCGTTTGATGCCCCT 59.011 50.000 0.00 0.00 0.00 4.79
1744 2646 0.609131 ACCTTCGTTTGATGCCCCTG 60.609 55.000 0.00 0.00 0.00 4.45
1745 2647 0.322456 CCTTCGTTTGATGCCCCTGA 60.322 55.000 0.00 0.00 0.00 3.86
1746 2648 1.683011 CCTTCGTTTGATGCCCCTGAT 60.683 52.381 0.00 0.00 0.00 2.90
1747 2649 2.094675 CTTCGTTTGATGCCCCTGATT 58.905 47.619 0.00 0.00 0.00 2.57
1748 2650 3.278574 CTTCGTTTGATGCCCCTGATTA 58.721 45.455 0.00 0.00 0.00 1.75
1749 2651 3.358111 TCGTTTGATGCCCCTGATTAA 57.642 42.857 0.00 0.00 0.00 1.40
1750 2652 3.691575 TCGTTTGATGCCCCTGATTAAA 58.308 40.909 0.00 0.00 0.00 1.52
1751 2653 4.277476 TCGTTTGATGCCCCTGATTAAAT 58.723 39.130 0.00 0.00 0.00 1.40
1752 2654 4.338118 TCGTTTGATGCCCCTGATTAAATC 59.662 41.667 0.00 0.00 0.00 2.17
1753 2655 4.097741 CGTTTGATGCCCCTGATTAAATCA 59.902 41.667 0.00 0.00 37.76 2.57
1754 2656 5.221303 CGTTTGATGCCCCTGATTAAATCAT 60.221 40.000 0.00 0.00 38.85 2.45
1755 2657 6.016360 CGTTTGATGCCCCTGATTAAATCATA 60.016 38.462 0.00 0.00 38.85 2.15
1756 2658 6.899393 TTGATGCCCCTGATTAAATCATAC 57.101 37.500 0.00 0.00 38.85 2.39
1757 2659 5.951204 TGATGCCCCTGATTAAATCATACA 58.049 37.500 0.00 0.00 38.85 2.29
1758 2660 5.769662 TGATGCCCCTGATTAAATCATACAC 59.230 40.000 0.00 0.00 38.85 2.90
1759 2661 5.387113 TGCCCCTGATTAAATCATACACT 57.613 39.130 0.00 0.00 38.85 3.55
1760 2662 6.508030 TGCCCCTGATTAAATCATACACTA 57.492 37.500 0.00 0.00 38.85 2.74
1761 2663 6.905736 TGCCCCTGATTAAATCATACACTAA 58.094 36.000 0.00 0.00 38.85 2.24
1762 2664 7.526041 TGCCCCTGATTAAATCATACACTAAT 58.474 34.615 0.00 0.00 38.85 1.73
1763 2665 8.004215 TGCCCCTGATTAAATCATACACTAATT 58.996 33.333 0.00 0.00 38.85 1.40
1764 2666 9.515226 GCCCCTGATTAAATCATACACTAATTA 57.485 33.333 0.00 0.00 38.85 1.40
1777 2679 9.320352 TCATACACTAATTATACACGCAAATGT 57.680 29.630 0.00 0.00 36.56 2.71
1778 2680 9.368921 CATACACTAATTATACACGCAAATGTG 57.631 33.333 0.00 0.00 45.41 3.21
1789 2691 5.198116 CACGCAAATGTGTACGATTAAGA 57.802 39.130 0.00 0.00 36.94 2.10
1790 2692 5.795766 CACGCAAATGTGTACGATTAAGAT 58.204 37.500 0.00 0.00 36.94 2.40
1791 2693 5.896432 CACGCAAATGTGTACGATTAAGATC 59.104 40.000 0.00 0.00 36.94 2.75
1792 2694 5.579119 ACGCAAATGTGTACGATTAAGATCA 59.421 36.000 0.00 0.00 36.94 2.92
1793 2695 6.122782 CGCAAATGTGTACGATTAAGATCAG 58.877 40.000 0.00 0.00 32.33 2.90
1794 2696 6.019881 CGCAAATGTGTACGATTAAGATCAGA 60.020 38.462 0.00 0.00 32.33 3.27
1795 2697 7.340699 GCAAATGTGTACGATTAAGATCAGAG 58.659 38.462 0.00 0.00 32.33 3.35
1796 2698 7.222805 GCAAATGTGTACGATTAAGATCAGAGA 59.777 37.037 0.00 0.00 32.33 3.10
1797 2699 8.535592 CAAATGTGTACGATTAAGATCAGAGAC 58.464 37.037 0.00 0.00 32.33 3.36
1798 2700 7.575414 ATGTGTACGATTAAGATCAGAGACT 57.425 36.000 0.00 0.00 32.33 3.24
1799 2701 7.017498 TGTGTACGATTAAGATCAGAGACTC 57.983 40.000 0.00 0.00 32.33 3.36
1800 2702 6.598064 TGTGTACGATTAAGATCAGAGACTCA 59.402 38.462 5.02 0.00 32.33 3.41
1801 2703 6.908284 GTGTACGATTAAGATCAGAGACTCAC 59.092 42.308 5.02 0.00 32.33 3.51
1802 2704 5.163302 ACGATTAAGATCAGAGACTCACG 57.837 43.478 5.02 0.00 32.33 4.35
1803 2705 4.035792 ACGATTAAGATCAGAGACTCACGG 59.964 45.833 5.02 0.00 32.33 4.94
1804 2706 4.555708 CGATTAAGATCAGAGACTCACGGG 60.556 50.000 5.02 0.00 32.33 5.28
1805 2707 2.516227 AAGATCAGAGACTCACGGGA 57.484 50.000 5.02 0.00 0.00 5.14
1806 2708 2.516227 AGATCAGAGACTCACGGGAA 57.484 50.000 5.02 0.00 0.00 3.97
1807 2709 2.374184 AGATCAGAGACTCACGGGAAG 58.626 52.381 5.02 0.00 0.00 3.46
1808 2710 2.025793 AGATCAGAGACTCACGGGAAGA 60.026 50.000 5.02 0.00 0.00 2.87
1809 2711 2.516227 TCAGAGACTCACGGGAAGAT 57.484 50.000 5.02 0.00 0.00 2.40
1810 2712 3.646736 TCAGAGACTCACGGGAAGATA 57.353 47.619 5.02 0.00 0.00 1.98
1811 2713 4.171878 TCAGAGACTCACGGGAAGATAT 57.828 45.455 5.02 0.00 0.00 1.63
1812 2714 4.138290 TCAGAGACTCACGGGAAGATATC 58.862 47.826 5.02 0.00 0.00 1.63
1813 2715 3.885901 CAGAGACTCACGGGAAGATATCA 59.114 47.826 5.32 0.00 0.00 2.15
1814 2716 3.886505 AGAGACTCACGGGAAGATATCAC 59.113 47.826 5.32 0.00 0.00 3.06
1815 2717 3.632333 AGACTCACGGGAAGATATCACA 58.368 45.455 5.32 0.00 0.00 3.58
1816 2718 4.023980 AGACTCACGGGAAGATATCACAA 58.976 43.478 5.32 0.00 0.00 3.33
1817 2719 4.113354 GACTCACGGGAAGATATCACAAC 58.887 47.826 5.32 0.00 0.00 3.32
1818 2720 3.513912 ACTCACGGGAAGATATCACAACA 59.486 43.478 5.32 0.00 0.00 3.33
1819 2721 3.857052 TCACGGGAAGATATCACAACAC 58.143 45.455 5.32 0.00 0.00 3.32
1820 2722 3.259625 TCACGGGAAGATATCACAACACA 59.740 43.478 5.32 0.00 0.00 3.72
1821 2723 4.000325 CACGGGAAGATATCACAACACAA 59.000 43.478 5.32 0.00 0.00 3.33
1822 2724 4.000988 ACGGGAAGATATCACAACACAAC 58.999 43.478 5.32 0.00 0.00 3.32
1823 2725 4.000325 CGGGAAGATATCACAACACAACA 59.000 43.478 5.32 0.00 0.00 3.33
1824 2726 4.142902 CGGGAAGATATCACAACACAACAC 60.143 45.833 5.32 0.00 0.00 3.32
1825 2727 5.003804 GGGAAGATATCACAACACAACACT 58.996 41.667 5.32 0.00 0.00 3.55
1826 2728 6.170506 GGGAAGATATCACAACACAACACTA 58.829 40.000 5.32 0.00 0.00 2.74
1827 2729 6.313905 GGGAAGATATCACAACACAACACTAG 59.686 42.308 5.32 0.00 0.00 2.57
1828 2730 7.097192 GGAAGATATCACAACACAACACTAGA 58.903 38.462 5.32 0.00 0.00 2.43
1829 2731 7.063544 GGAAGATATCACAACACAACACTAGAC 59.936 40.741 5.32 0.00 0.00 2.59
1830 2732 6.993079 AGATATCACAACACAACACTAGACA 58.007 36.000 5.32 0.00 0.00 3.41
1831 2733 6.868864 AGATATCACAACACAACACTAGACAC 59.131 38.462 5.32 0.00 0.00 3.67
1832 2734 4.195225 TCACAACACAACACTAGACACA 57.805 40.909 0.00 0.00 0.00 3.72
1833 2735 4.570930 TCACAACACAACACTAGACACAA 58.429 39.130 0.00 0.00 0.00 3.33
1834 2736 4.998033 TCACAACACAACACTAGACACAAA 59.002 37.500 0.00 0.00 0.00 2.83
1835 2737 5.645929 TCACAACACAACACTAGACACAAAT 59.354 36.000 0.00 0.00 0.00 2.32
1836 2738 6.150307 TCACAACACAACACTAGACACAAATT 59.850 34.615 0.00 0.00 0.00 1.82
1837 2739 6.806249 CACAACACAACACTAGACACAAATTT 59.194 34.615 0.00 0.00 0.00 1.82
1838 2740 7.965655 CACAACACAACACTAGACACAAATTTA 59.034 33.333 0.00 0.00 0.00 1.40
1839 2741 8.516234 ACAACACAACACTAGACACAAATTTAA 58.484 29.630 0.00 0.00 0.00 1.52
1840 2742 9.347934 CAACACAACACTAGACACAAATTTAAA 57.652 29.630 0.00 0.00 0.00 1.52
1841 2743 9.915629 AACACAACACTAGACACAAATTTAAAA 57.084 25.926 0.00 0.00 0.00 1.52
1870 2772 7.404671 ACAAGTTTTATATTACAAGCCAGGG 57.595 36.000 0.00 0.00 0.00 4.45
1871 2773 6.379988 ACAAGTTTTATATTACAAGCCAGGGG 59.620 38.462 0.00 0.00 0.00 4.79
1895 2797 1.859383 GAGGGCTCGAATACAAGCTC 58.141 55.000 0.00 0.00 39.39 4.09
1896 2798 0.103208 AGGGCTCGAATACAAGCTCG 59.897 55.000 0.00 0.00 43.97 5.03
1897 2799 0.102481 GGGCTCGAATACAAGCTCGA 59.898 55.000 0.00 0.00 41.54 4.04
1898 2800 1.269831 GGGCTCGAATACAAGCTCGAT 60.270 52.381 0.00 0.00 42.73 3.59
1899 2801 2.030185 GGGCTCGAATACAAGCTCGATA 60.030 50.000 0.00 0.00 42.73 2.92
1900 2802 2.981140 GGCTCGAATACAAGCTCGATAC 59.019 50.000 0.00 0.00 42.73 2.24
1901 2803 3.550233 GGCTCGAATACAAGCTCGATACA 60.550 47.826 0.00 0.00 42.73 2.29
2110 3463 2.825836 CGCCAGTTCCATCAGGCC 60.826 66.667 0.00 0.00 44.18 5.19
2190 3544 2.807967 CAGACGTTGGAGAAAATGCTCA 59.192 45.455 0.00 0.00 36.62 4.26
2195 3549 3.149196 GTTGGAGAAAATGCTCAGGTCA 58.851 45.455 0.00 0.00 36.62 4.02
2199 3553 1.074405 AGAAAATGCTCAGGTCAGGCA 59.926 47.619 0.00 0.00 40.32 4.75
2200 3554 1.200948 GAAAATGCTCAGGTCAGGCAC 59.799 52.381 0.00 0.00 38.83 5.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 4.913335 AGATACAATGGCATCAAGCTTG 57.087 40.909 20.81 20.81 44.79 4.01
7 8 9.964354 TTATATAGATACAATGGCATCAAGCTT 57.036 29.630 0.00 0.00 44.79 3.74
8 9 9.964354 TTTATATAGATACAATGGCATCAAGCT 57.036 29.630 0.00 0.00 44.79 3.74
43 44 9.442062 TGGTATGTCTATGGTTTATCCTAGAAA 57.558 33.333 0.00 0.00 37.07 2.52
44 45 9.090103 CTGGTATGTCTATGGTTTATCCTAGAA 57.910 37.037 0.00 0.00 37.07 2.10
45 46 7.178628 GCTGGTATGTCTATGGTTTATCCTAGA 59.821 40.741 0.00 0.00 37.07 2.43
46 47 7.324178 GCTGGTATGTCTATGGTTTATCCTAG 58.676 42.308 0.00 0.00 37.07 3.02
47 48 6.071560 CGCTGGTATGTCTATGGTTTATCCTA 60.072 42.308 0.00 0.00 37.07 2.94
48 49 5.279506 CGCTGGTATGTCTATGGTTTATCCT 60.280 44.000 0.00 0.00 37.07 3.24
49 50 4.929808 CGCTGGTATGTCTATGGTTTATCC 59.070 45.833 0.00 0.00 0.00 2.59
50 51 5.779922 TCGCTGGTATGTCTATGGTTTATC 58.220 41.667 0.00 0.00 0.00 1.75
51 52 5.801531 TCGCTGGTATGTCTATGGTTTAT 57.198 39.130 0.00 0.00 0.00 1.40
52 53 5.601583 TTCGCTGGTATGTCTATGGTTTA 57.398 39.130 0.00 0.00 0.00 2.01
53 54 4.481368 TTCGCTGGTATGTCTATGGTTT 57.519 40.909 0.00 0.00 0.00 3.27
54 55 4.442706 CTTTCGCTGGTATGTCTATGGTT 58.557 43.478 0.00 0.00 0.00 3.67
55 56 3.181465 CCTTTCGCTGGTATGTCTATGGT 60.181 47.826 0.00 0.00 0.00 3.55
56 57 3.069586 TCCTTTCGCTGGTATGTCTATGG 59.930 47.826 0.00 0.00 0.00 2.74
57 58 4.202161 ACTCCTTTCGCTGGTATGTCTATG 60.202 45.833 0.00 0.00 0.00 2.23
58 59 3.961408 ACTCCTTTCGCTGGTATGTCTAT 59.039 43.478 0.00 0.00 0.00 1.98
59 60 3.362706 ACTCCTTTCGCTGGTATGTCTA 58.637 45.455 0.00 0.00 0.00 2.59
60 61 2.180276 ACTCCTTTCGCTGGTATGTCT 58.820 47.619 0.00 0.00 0.00 3.41
61 62 2.674796 ACTCCTTTCGCTGGTATGTC 57.325 50.000 0.00 0.00 0.00 3.06
62 63 4.755266 AATACTCCTTTCGCTGGTATGT 57.245 40.909 0.00 0.00 0.00 2.29
63 64 5.597806 TGTAATACTCCTTTCGCTGGTATG 58.402 41.667 0.00 0.00 0.00 2.39
64 65 5.864418 TGTAATACTCCTTTCGCTGGTAT 57.136 39.130 0.00 0.00 0.00 2.73
65 66 5.864418 ATGTAATACTCCTTTCGCTGGTA 57.136 39.130 0.00 0.00 0.00 3.25
66 67 4.755266 ATGTAATACTCCTTTCGCTGGT 57.245 40.909 0.00 0.00 0.00 4.00
67 68 5.692204 CACTATGTAATACTCCTTTCGCTGG 59.308 44.000 0.00 0.00 0.00 4.85
68 69 6.273825 ACACTATGTAATACTCCTTTCGCTG 58.726 40.000 0.00 0.00 0.00 5.18
69 70 6.466885 ACACTATGTAATACTCCTTTCGCT 57.533 37.500 0.00 0.00 0.00 4.93
70 71 6.979238 AGAACACTATGTAATACTCCTTTCGC 59.021 38.462 0.00 0.00 0.00 4.70
71 72 8.407064 AGAGAACACTATGTAATACTCCTTTCG 58.593 37.037 0.00 0.00 0.00 3.46
74 75 9.134055 GGTAGAGAACACTATGTAATACTCCTT 57.866 37.037 0.00 0.00 0.00 3.36
75 76 8.280084 TGGTAGAGAACACTATGTAATACTCCT 58.720 37.037 0.00 0.00 0.00 3.69
76 77 8.351461 GTGGTAGAGAACACTATGTAATACTCC 58.649 40.741 0.00 0.00 34.84 3.85
77 78 9.122779 AGTGGTAGAGAACACTATGTAATACTC 57.877 37.037 0.00 0.00 45.45 2.59
89 90 4.167554 CACAGAGAGTGGTAGAGAACAC 57.832 50.000 0.00 0.00 44.69 3.32
101 102 4.564406 CCATTGCCTAAGTTCACAGAGAGT 60.564 45.833 0.00 0.00 0.00 3.24
102 103 3.937706 CCATTGCCTAAGTTCACAGAGAG 59.062 47.826 0.00 0.00 0.00 3.20
103 104 3.869912 GCCATTGCCTAAGTTCACAGAGA 60.870 47.826 0.00 0.00 0.00 3.10
104 105 2.421424 GCCATTGCCTAAGTTCACAGAG 59.579 50.000 0.00 0.00 0.00 3.35
105 106 2.224744 TGCCATTGCCTAAGTTCACAGA 60.225 45.455 0.00 0.00 36.33 3.41
106 107 2.161855 TGCCATTGCCTAAGTTCACAG 58.838 47.619 0.00 0.00 36.33 3.66
107 108 2.284754 TGCCATTGCCTAAGTTCACA 57.715 45.000 0.00 0.00 36.33 3.58
108 109 3.658757 TTTGCCATTGCCTAAGTTCAC 57.341 42.857 0.00 0.00 36.33 3.18
109 110 5.016173 AGTATTTGCCATTGCCTAAGTTCA 58.984 37.500 0.00 0.00 36.33 3.18
110 111 5.582689 AGTATTTGCCATTGCCTAAGTTC 57.417 39.130 0.00 0.00 36.33 3.01
111 112 5.067805 GCTAGTATTTGCCATTGCCTAAGTT 59.932 40.000 0.00 0.00 36.33 2.66
112 113 4.580580 GCTAGTATTTGCCATTGCCTAAGT 59.419 41.667 0.00 0.00 36.33 2.24
113 114 4.580167 TGCTAGTATTTGCCATTGCCTAAG 59.420 41.667 0.00 0.00 36.33 2.18
114 115 4.531854 TGCTAGTATTTGCCATTGCCTAA 58.468 39.130 0.00 0.00 36.33 2.69
115 116 4.163441 TGCTAGTATTTGCCATTGCCTA 57.837 40.909 0.00 0.00 36.33 3.93
116 117 3.017048 TGCTAGTATTTGCCATTGCCT 57.983 42.857 0.00 0.00 36.33 4.75
117 118 3.305608 GGATGCTAGTATTTGCCATTGCC 60.306 47.826 0.00 0.00 36.33 4.52
118 119 3.571401 AGGATGCTAGTATTTGCCATTGC 59.429 43.478 0.00 0.00 38.26 3.56
119 120 4.217118 GGAGGATGCTAGTATTTGCCATTG 59.783 45.833 0.00 0.00 0.00 2.82
120 121 4.141181 TGGAGGATGCTAGTATTTGCCATT 60.141 41.667 0.00 0.00 0.00 3.16
121 122 3.395607 TGGAGGATGCTAGTATTTGCCAT 59.604 43.478 0.00 0.00 0.00 4.40
122 123 2.777114 TGGAGGATGCTAGTATTTGCCA 59.223 45.455 0.00 0.54 0.00 4.92
123 124 3.492102 TGGAGGATGCTAGTATTTGCC 57.508 47.619 0.00 0.00 0.00 4.52
124 125 4.455606 ACTTGGAGGATGCTAGTATTTGC 58.544 43.478 0.00 0.00 41.03 3.68
125 126 5.923204 AGACTTGGAGGATGCTAGTATTTG 58.077 41.667 0.00 0.00 43.02 2.32
126 127 6.156949 TGAAGACTTGGAGGATGCTAGTATTT 59.843 38.462 0.00 0.00 42.56 1.40
127 128 5.663106 TGAAGACTTGGAGGATGCTAGTATT 59.337 40.000 0.00 0.00 44.68 1.89
128 129 5.211973 TGAAGACTTGGAGGATGCTAGTAT 58.788 41.667 0.00 0.00 43.02 2.12
129 130 4.610333 TGAAGACTTGGAGGATGCTAGTA 58.390 43.478 0.00 0.00 43.02 1.82
130 131 3.445008 TGAAGACTTGGAGGATGCTAGT 58.555 45.455 0.00 0.00 45.87 2.57
131 132 4.686191 ATGAAGACTTGGAGGATGCTAG 57.314 45.455 0.00 0.00 35.12 3.42
132 133 4.225942 ACAATGAAGACTTGGAGGATGCTA 59.774 41.667 0.00 0.00 0.00 3.49
133 134 3.009916 ACAATGAAGACTTGGAGGATGCT 59.990 43.478 0.00 0.00 0.00 3.79
134 135 3.350833 ACAATGAAGACTTGGAGGATGC 58.649 45.455 0.00 0.00 0.00 3.91
135 136 5.972107 AAACAATGAAGACTTGGAGGATG 57.028 39.130 0.00 0.00 0.00 3.51
136 137 6.983906 AAAAACAATGAAGACTTGGAGGAT 57.016 33.333 0.00 0.00 0.00 3.24
137 138 7.723616 TGATAAAAACAATGAAGACTTGGAGGA 59.276 33.333 0.00 0.00 0.00 3.71
138 139 7.885297 TGATAAAAACAATGAAGACTTGGAGG 58.115 34.615 0.00 0.00 0.00 4.30
139 140 9.918630 AATGATAAAAACAATGAAGACTTGGAG 57.081 29.630 0.00 0.00 0.00 3.86
140 141 9.695526 CAATGATAAAAACAATGAAGACTTGGA 57.304 29.630 0.00 0.00 0.00 3.53
141 142 8.437742 GCAATGATAAAAACAATGAAGACTTGG 58.562 33.333 0.00 0.00 0.00 3.61
142 143 8.157813 CGCAATGATAAAAACAATGAAGACTTG 58.842 33.333 0.00 0.00 0.00 3.16
143 144 7.148755 GCGCAATGATAAAAACAATGAAGACTT 60.149 33.333 0.30 0.00 0.00 3.01
144 145 6.308766 GCGCAATGATAAAAACAATGAAGACT 59.691 34.615 0.30 0.00 0.00 3.24
145 146 6.089283 TGCGCAATGATAAAAACAATGAAGAC 59.911 34.615 8.16 0.00 0.00 3.01
146 147 6.155136 TGCGCAATGATAAAAACAATGAAGA 58.845 32.000 8.16 0.00 0.00 2.87
147 148 6.392353 TGCGCAATGATAAAAACAATGAAG 57.608 33.333 8.16 0.00 0.00 3.02
148 149 6.423302 ACTTGCGCAATGATAAAAACAATGAA 59.577 30.769 25.26 0.00 0.00 2.57
149 150 5.925397 ACTTGCGCAATGATAAAAACAATGA 59.075 32.000 25.26 0.00 0.00 2.57
150 151 6.089820 AGACTTGCGCAATGATAAAAACAATG 59.910 34.615 25.26 8.98 0.00 2.82
151 152 6.089820 CAGACTTGCGCAATGATAAAAACAAT 59.910 34.615 25.26 0.00 0.00 2.71
152 153 5.401972 CAGACTTGCGCAATGATAAAAACAA 59.598 36.000 25.26 0.00 0.00 2.83
153 154 4.916831 CAGACTTGCGCAATGATAAAAACA 59.083 37.500 25.26 0.00 0.00 2.83
154 155 4.201523 GCAGACTTGCGCAATGATAAAAAC 60.202 41.667 25.26 7.28 41.13 2.43
155 156 3.919804 GCAGACTTGCGCAATGATAAAAA 59.080 39.130 25.26 0.00 41.13 1.94
156 157 3.500982 GCAGACTTGCGCAATGATAAAA 58.499 40.909 25.26 0.00 41.13 1.52
157 158 3.135414 GCAGACTTGCGCAATGATAAA 57.865 42.857 25.26 0.00 41.13 1.40
158 159 2.830772 GCAGACTTGCGCAATGATAA 57.169 45.000 25.26 0.00 41.13 1.75
167 168 8.405221 CATCATCATGAGTAAGCAGACTTGCG 62.405 46.154 0.09 0.00 43.03 4.85
168 169 5.277393 CATCATCATGAGTAAGCAGACTTGC 60.277 44.000 0.09 0.00 40.51 4.01
169 170 5.236695 CCATCATCATGAGTAAGCAGACTTG 59.763 44.000 0.09 0.00 32.84 3.16
170 171 5.366460 CCATCATCATGAGTAAGCAGACTT 58.634 41.667 0.09 0.00 34.32 3.01
171 172 4.743045 GCCATCATCATGAGTAAGCAGACT 60.743 45.833 0.09 0.00 30.57 3.24
172 173 3.497640 GCCATCATCATGAGTAAGCAGAC 59.502 47.826 0.09 0.00 30.57 3.51
173 174 3.135167 TGCCATCATCATGAGTAAGCAGA 59.865 43.478 0.09 0.00 30.57 4.26
174 175 3.473625 TGCCATCATCATGAGTAAGCAG 58.526 45.455 0.09 0.00 30.57 4.24
175 176 3.564053 TGCCATCATCATGAGTAAGCA 57.436 42.857 0.09 3.88 30.57 3.91
176 177 3.628942 TGTTGCCATCATCATGAGTAAGC 59.371 43.478 0.09 1.09 30.57 3.09
177 178 4.036027 GGTGTTGCCATCATCATGAGTAAG 59.964 45.833 0.09 0.00 37.17 2.34
178 179 3.947196 GGTGTTGCCATCATCATGAGTAA 59.053 43.478 0.09 0.00 37.17 2.24
179 180 3.544684 GGTGTTGCCATCATCATGAGTA 58.455 45.455 0.09 0.00 37.17 2.59
180 181 2.372264 GGTGTTGCCATCATCATGAGT 58.628 47.619 0.09 0.00 37.17 3.41
181 182 1.332686 CGGTGTTGCCATCATCATGAG 59.667 52.381 0.09 0.00 36.97 2.90
182 183 1.065564 TCGGTGTTGCCATCATCATGA 60.066 47.619 0.00 0.00 36.97 3.07
183 184 1.381522 TCGGTGTTGCCATCATCATG 58.618 50.000 0.00 0.00 36.97 3.07
184 185 2.353357 ATCGGTGTTGCCATCATCAT 57.647 45.000 0.00 0.00 36.97 2.45
185 186 2.837498 CTATCGGTGTTGCCATCATCA 58.163 47.619 0.00 0.00 36.97 3.07
186 187 1.532868 GCTATCGGTGTTGCCATCATC 59.467 52.381 0.00 0.00 36.97 2.92
187 188 1.597742 GCTATCGGTGTTGCCATCAT 58.402 50.000 0.00 0.00 36.97 2.45
188 189 0.809636 CGCTATCGGTGTTGCCATCA 60.810 55.000 0.00 0.00 36.97 3.07
189 190 1.934463 CGCTATCGGTGTTGCCATC 59.066 57.895 0.00 0.00 36.97 3.51
190 191 2.180204 GCGCTATCGGTGTTGCCAT 61.180 57.895 0.00 0.00 36.97 4.40
191 192 2.817834 GCGCTATCGGTGTTGCCA 60.818 61.111 0.00 0.00 36.97 4.92
192 193 2.813179 CTGCGCTATCGGTGTTGCC 61.813 63.158 9.73 0.00 35.95 4.52
193 194 2.703409 CTGCGCTATCGGTGTTGC 59.297 61.111 9.73 0.00 35.95 4.17
194 195 2.813179 GCCTGCGCTATCGGTGTTG 61.813 63.158 9.73 0.00 35.95 3.33
195 196 2.511600 GCCTGCGCTATCGGTGTT 60.512 61.111 9.73 0.00 35.95 3.32
196 197 3.723235 CTGCCTGCGCTATCGGTGT 62.723 63.158 9.73 0.00 35.95 4.16
197 198 2.963854 CTGCCTGCGCTATCGGTG 60.964 66.667 9.73 0.00 35.95 4.94
198 199 4.899239 GCTGCCTGCGCTATCGGT 62.899 66.667 9.73 0.00 35.95 4.69
215 216 0.321653 GTATCCCATAAGCCTGCCGG 60.322 60.000 0.00 0.00 0.00 6.13
216 217 0.396435 TGTATCCCATAAGCCTGCCG 59.604 55.000 0.00 0.00 0.00 5.69
217 218 2.656947 TTGTATCCCATAAGCCTGCC 57.343 50.000 0.00 0.00 0.00 4.85
218 219 3.084786 GGATTGTATCCCATAAGCCTGC 58.915 50.000 0.00 0.00 43.88 4.85
230 231 2.099756 GGGCAGCAAACTGGATTGTATC 59.900 50.000 0.00 0.00 44.63 2.24
231 232 2.102578 GGGCAGCAAACTGGATTGTAT 58.897 47.619 0.00 0.00 44.63 2.29
232 233 1.075374 AGGGCAGCAAACTGGATTGTA 59.925 47.619 0.00 0.00 44.63 2.41
233 234 0.178953 AGGGCAGCAAACTGGATTGT 60.179 50.000 0.00 0.00 44.63 2.71
234 235 1.747355 CTAGGGCAGCAAACTGGATTG 59.253 52.381 0.00 0.00 44.63 2.67
235 236 1.341383 CCTAGGGCAGCAAACTGGATT 60.341 52.381 0.00 0.00 44.63 3.01
236 237 0.257039 CCTAGGGCAGCAAACTGGAT 59.743 55.000 0.00 0.00 44.63 3.41
237 238 1.685224 CCTAGGGCAGCAAACTGGA 59.315 57.895 0.00 0.00 44.63 3.86
238 239 1.379044 CCCTAGGGCAGCAAACTGG 60.379 63.158 16.90 0.00 44.63 4.00
240 241 1.133809 TGTCCCTAGGGCAGCAAACT 61.134 55.000 24.42 0.00 34.68 2.66
241 242 0.034089 ATGTCCCTAGGGCAGCAAAC 60.034 55.000 24.42 15.21 34.68 2.93
242 243 0.255890 GATGTCCCTAGGGCAGCAAA 59.744 55.000 26.00 7.46 34.68 3.68
243 244 0.621571 AGATGTCCCTAGGGCAGCAA 60.622 55.000 29.80 11.73 32.83 3.91
244 245 0.264657 TAGATGTCCCTAGGGCAGCA 59.735 55.000 29.80 24.21 32.83 4.41
245 246 0.682292 GTAGATGTCCCTAGGGCAGC 59.318 60.000 24.42 24.47 34.68 5.25
246 247 1.967066 CAGTAGATGTCCCTAGGGCAG 59.033 57.143 24.42 7.59 34.68 4.85
247 248 1.291033 ACAGTAGATGTCCCTAGGGCA 59.709 52.381 24.42 23.14 37.75 5.36
248 249 2.089600 ACAGTAGATGTCCCTAGGGC 57.910 55.000 24.42 18.20 37.75 5.19
249 250 3.133003 CACAACAGTAGATGTCCCTAGGG 59.867 52.174 23.22 23.22 43.00 3.53
250 251 3.133003 CCACAACAGTAGATGTCCCTAGG 59.867 52.174 0.06 0.06 43.00 3.02
251 252 3.133003 CCCACAACAGTAGATGTCCCTAG 59.867 52.174 0.00 0.00 43.00 3.02
252 253 3.104512 CCCACAACAGTAGATGTCCCTA 58.895 50.000 0.00 0.00 43.00 3.53
253 254 1.909302 CCCACAACAGTAGATGTCCCT 59.091 52.381 0.00 0.00 43.00 4.20
254 255 1.628846 ACCCACAACAGTAGATGTCCC 59.371 52.381 0.00 0.00 43.00 4.46
255 256 3.418684 AACCCACAACAGTAGATGTCC 57.581 47.619 0.00 0.00 43.00 4.02
256 257 3.502211 CCAAACCCACAACAGTAGATGTC 59.498 47.826 0.00 0.00 43.00 3.06
257 258 3.486383 CCAAACCCACAACAGTAGATGT 58.514 45.455 0.00 0.00 46.97 3.06
258 259 2.228822 GCCAAACCCACAACAGTAGATG 59.771 50.000 0.00 0.00 0.00 2.90
259 260 2.514803 GCCAAACCCACAACAGTAGAT 58.485 47.619 0.00 0.00 0.00 1.98
260 261 1.812324 CGCCAAACCCACAACAGTAGA 60.812 52.381 0.00 0.00 0.00 2.59
261 262 0.591170 CGCCAAACCCACAACAGTAG 59.409 55.000 0.00 0.00 0.00 2.57
262 263 0.820074 CCGCCAAACCCACAACAGTA 60.820 55.000 0.00 0.00 0.00 2.74
263 264 2.124693 CCGCCAAACCCACAACAGT 61.125 57.895 0.00 0.00 0.00 3.55
264 265 2.124693 ACCGCCAAACCCACAACAG 61.125 57.895 0.00 0.00 0.00 3.16
265 266 2.043852 ACCGCCAAACCCACAACA 60.044 55.556 0.00 0.00 0.00 3.33
266 267 2.415426 CACCGCCAAACCCACAAC 59.585 61.111 0.00 0.00 0.00 3.32
267 268 2.043852 ACACCGCCAAACCCACAA 60.044 55.556 0.00 0.00 0.00 3.33
268 269 2.632602 ATCACACCGCCAAACCCACA 62.633 55.000 0.00 0.00 0.00 4.17
269 270 1.901464 ATCACACCGCCAAACCCAC 60.901 57.895 0.00 0.00 0.00 4.61
270 271 1.900981 CATCACACCGCCAAACCCA 60.901 57.895 0.00 0.00 0.00 4.51
271 272 2.635443 CCATCACACCGCCAAACCC 61.635 63.158 0.00 0.00 0.00 4.11
272 273 2.961768 CCATCACACCGCCAAACC 59.038 61.111 0.00 0.00 0.00 3.27
273 274 2.258286 GCCATCACACCGCCAAAC 59.742 61.111 0.00 0.00 0.00 2.93
274 275 2.988684 GGCCATCACACCGCCAAA 60.989 61.111 0.00 0.00 42.52 3.28
277 278 2.755469 ATTGGCCATCACACCGCC 60.755 61.111 6.09 0.00 43.32 6.13
278 279 2.491152 CATTGGCCATCACACCGC 59.509 61.111 6.09 0.00 0.00 5.68
279 280 0.964860 TTCCATTGGCCATCACACCG 60.965 55.000 6.09 0.00 0.00 4.94
280 281 0.532115 GTTCCATTGGCCATCACACC 59.468 55.000 6.09 0.00 0.00 4.16
281 282 1.203052 CAGTTCCATTGGCCATCACAC 59.797 52.381 6.09 0.00 0.00 3.82
282 283 1.548081 CAGTTCCATTGGCCATCACA 58.452 50.000 6.09 0.00 0.00 3.58
283 284 0.174162 GCAGTTCCATTGGCCATCAC 59.826 55.000 6.09 0.00 0.00 3.06
284 285 0.251698 TGCAGTTCCATTGGCCATCA 60.252 50.000 6.09 0.00 0.00 3.07
285 286 1.068127 GATGCAGTTCCATTGGCCATC 59.932 52.381 6.09 0.00 0.00 3.51
286 287 1.117150 GATGCAGTTCCATTGGCCAT 58.883 50.000 6.09 0.00 0.00 4.40
287 288 0.971959 GGATGCAGTTCCATTGGCCA 60.972 55.000 0.00 0.00 35.72 5.36
288 289 0.685458 AGGATGCAGTTCCATTGGCC 60.685 55.000 9.02 0.00 38.32 5.36
289 290 0.743097 GAGGATGCAGTTCCATTGGC 59.257 55.000 9.02 0.00 38.32 4.52
290 291 1.341285 TGGAGGATGCAGTTCCATTGG 60.341 52.381 9.02 0.00 38.32 3.16
291 292 1.747355 GTGGAGGATGCAGTTCCATTG 59.253 52.381 16.71 0.00 42.54 2.82
292 293 1.341383 GGTGGAGGATGCAGTTCCATT 60.341 52.381 16.71 0.00 42.54 3.16
293 294 0.257039 GGTGGAGGATGCAGTTCCAT 59.743 55.000 16.71 0.18 42.54 3.41
294 295 1.133181 TGGTGGAGGATGCAGTTCCA 61.133 55.000 9.02 10.30 36.81 3.53
295 296 0.038166 TTGGTGGAGGATGCAGTTCC 59.962 55.000 0.00 0.00 36.81 3.62
296 297 1.457346 CTTGGTGGAGGATGCAGTTC 58.543 55.000 0.00 0.00 36.81 3.01
297 298 0.610232 GCTTGGTGGAGGATGCAGTT 60.610 55.000 0.00 0.00 36.81 3.16
298 299 1.001641 GCTTGGTGGAGGATGCAGT 60.002 57.895 0.00 0.00 36.81 4.40
299 300 1.751927 GGCTTGGTGGAGGATGCAG 60.752 63.158 0.00 0.00 36.81 4.41
300 301 1.792757 AAGGCTTGGTGGAGGATGCA 61.793 55.000 0.00 0.00 0.00 3.96
301 302 1.000396 AAGGCTTGGTGGAGGATGC 60.000 57.895 0.00 0.00 0.00 3.91
302 303 0.329261 TCAAGGCTTGGTGGAGGATG 59.671 55.000 25.92 0.00 0.00 3.51
303 304 1.302907 ATCAAGGCTTGGTGGAGGAT 58.697 50.000 25.92 8.34 0.00 3.24
304 305 1.839994 CTATCAAGGCTTGGTGGAGGA 59.160 52.381 25.92 6.20 0.00 3.71
305 306 1.133976 CCTATCAAGGCTTGGTGGAGG 60.134 57.143 23.65 18.37 35.64 4.30
306 307 2.338577 CCTATCAAGGCTTGGTGGAG 57.661 55.000 23.65 13.54 35.64 3.86
309 310 1.004745 ACCACCTATCAAGGCTTGGTG 59.995 52.381 25.92 23.43 45.90 4.17
317 318 5.749462 AGGAGAATGAAACCACCTATCAAG 58.251 41.667 0.00 0.00 0.00 3.02
318 319 5.339200 GGAGGAGAATGAAACCACCTATCAA 60.339 44.000 0.00 0.00 32.98 2.57
319 320 4.164221 GGAGGAGAATGAAACCACCTATCA 59.836 45.833 0.00 0.00 32.98 2.15
320 321 4.709250 GGAGGAGAATGAAACCACCTATC 58.291 47.826 0.00 0.00 32.98 2.08
321 322 3.134804 CGGAGGAGAATGAAACCACCTAT 59.865 47.826 0.00 0.00 33.44 2.57
322 323 2.500098 CGGAGGAGAATGAAACCACCTA 59.500 50.000 0.00 0.00 33.44 3.08
323 324 1.279271 CGGAGGAGAATGAAACCACCT 59.721 52.381 0.00 0.00 33.44 4.00
324 325 1.278127 TCGGAGGAGAATGAAACCACC 59.722 52.381 0.00 0.00 0.00 4.61
325 326 2.622436 CTCGGAGGAGAATGAAACCAC 58.378 52.381 0.00 0.00 43.27 4.16
326 327 1.066143 GCTCGGAGGAGAATGAAACCA 60.066 52.381 7.20 0.00 43.27 3.67
327 328 1.208293 AGCTCGGAGGAGAATGAAACC 59.792 52.381 7.20 0.00 43.27 3.27
328 329 2.682155 AGCTCGGAGGAGAATGAAAC 57.318 50.000 7.20 0.00 43.27 2.78
329 330 5.598830 ACTTATAGCTCGGAGGAGAATGAAA 59.401 40.000 7.20 0.00 43.27 2.69
330 331 5.141182 ACTTATAGCTCGGAGGAGAATGAA 58.859 41.667 7.20 0.00 43.27 2.57
331 332 4.730966 ACTTATAGCTCGGAGGAGAATGA 58.269 43.478 7.20 0.00 43.27 2.57
332 333 5.221342 ACAACTTATAGCTCGGAGGAGAATG 60.221 44.000 7.20 0.00 43.27 2.67
333 334 4.896482 ACAACTTATAGCTCGGAGGAGAAT 59.104 41.667 7.20 0.00 43.27 2.40
334 335 4.098044 CACAACTTATAGCTCGGAGGAGAA 59.902 45.833 7.20 0.00 43.27 2.87
335 336 3.632604 CACAACTTATAGCTCGGAGGAGA 59.367 47.826 7.20 0.00 43.27 3.71
336 337 3.381908 ACACAACTTATAGCTCGGAGGAG 59.618 47.826 7.20 0.00 43.46 3.69
337 338 3.362706 ACACAACTTATAGCTCGGAGGA 58.637 45.455 7.20 0.00 0.00 3.71
338 339 3.802948 ACACAACTTATAGCTCGGAGG 57.197 47.619 7.20 0.00 0.00 4.30
339 340 4.495422 ACAACACAACTTATAGCTCGGAG 58.505 43.478 0.00 0.00 0.00 4.63
340 341 4.530710 ACAACACAACTTATAGCTCGGA 57.469 40.909 0.00 0.00 0.00 4.55
341 342 5.607119 AAACAACACAACTTATAGCTCGG 57.393 39.130 0.00 0.00 0.00 4.63
342 343 7.129622 TGAAAAACAACACAACTTATAGCTCG 58.870 34.615 0.00 0.00 0.00 5.03
448 449 9.190317 CCTCCCACTTTTATTAGAAAAATAGCT 57.810 33.333 0.00 0.00 0.00 3.32
449 450 9.185680 TCCTCCCACTTTTATTAGAAAAATAGC 57.814 33.333 0.00 0.00 0.00 2.97
452 453 9.997172 ATCTCCTCCCACTTTTATTAGAAAAAT 57.003 29.630 0.00 0.00 0.00 1.82
453 454 9.822727 AATCTCCTCCCACTTTTATTAGAAAAA 57.177 29.630 0.00 0.00 0.00 1.94
454 455 9.822727 AAATCTCCTCCCACTTTTATTAGAAAA 57.177 29.630 0.00 0.00 0.00 2.29
455 456 9.822727 AAAATCTCCTCCCACTTTTATTAGAAA 57.177 29.630 0.00 0.00 0.00 2.52
456 457 9.822727 AAAAATCTCCTCCCACTTTTATTAGAA 57.177 29.630 0.00 0.00 0.00 2.10
482 483 9.875691 GATGTGCATTGAGACAGGTAATATATA 57.124 33.333 0.00 0.00 0.00 0.86
483 484 8.600668 AGATGTGCATTGAGACAGGTAATATAT 58.399 33.333 0.00 0.00 0.00 0.86
484 485 7.966812 AGATGTGCATTGAGACAGGTAATATA 58.033 34.615 0.00 0.00 0.00 0.86
485 486 6.835174 AGATGTGCATTGAGACAGGTAATAT 58.165 36.000 0.00 0.00 0.00 1.28
486 487 6.098838 AGAGATGTGCATTGAGACAGGTAATA 59.901 38.462 0.00 0.00 0.00 0.98
487 488 5.104610 AGAGATGTGCATTGAGACAGGTAAT 60.105 40.000 0.00 0.00 0.00 1.89
488 489 4.223700 AGAGATGTGCATTGAGACAGGTAA 59.776 41.667 0.00 0.00 0.00 2.85
489 490 3.771479 AGAGATGTGCATTGAGACAGGTA 59.229 43.478 0.00 0.00 0.00 3.08
490 491 2.570752 AGAGATGTGCATTGAGACAGGT 59.429 45.455 0.00 0.00 0.00 4.00
491 492 3.118702 AGAGAGATGTGCATTGAGACAGG 60.119 47.826 0.00 0.00 0.00 4.00
492 493 3.866327 CAGAGAGATGTGCATTGAGACAG 59.134 47.826 0.00 0.00 0.00 3.51
493 494 3.260128 ACAGAGAGATGTGCATTGAGACA 59.740 43.478 0.00 0.00 30.46 3.41
494 495 3.859443 ACAGAGAGATGTGCATTGAGAC 58.141 45.455 0.00 0.00 30.46 3.36
495 496 3.768215 AGACAGAGAGATGTGCATTGAGA 59.232 43.478 0.00 0.00 32.25 3.27
496 497 4.126208 AGACAGAGAGATGTGCATTGAG 57.874 45.455 0.00 0.00 32.25 3.02
497 498 4.020839 TCAAGACAGAGAGATGTGCATTGA 60.021 41.667 0.00 0.00 32.25 2.57
498 499 4.093115 GTCAAGACAGAGAGATGTGCATTG 59.907 45.833 0.00 0.00 32.25 2.82
499 500 4.252073 GTCAAGACAGAGAGATGTGCATT 58.748 43.478 0.00 0.00 32.25 3.56
500 501 3.260128 TGTCAAGACAGAGAGATGTGCAT 59.740 43.478 0.00 0.00 36.21 3.96
501 502 2.629617 TGTCAAGACAGAGAGATGTGCA 59.370 45.455 0.00 0.00 36.21 4.57
502 503 3.309961 TGTCAAGACAGAGAGATGTGC 57.690 47.619 0.00 0.00 36.21 4.57
503 504 5.131594 TCTTGTCAAGACAGAGAGATGTG 57.868 43.478 11.36 0.00 42.94 3.21
504 505 5.105392 GGATCTTGTCAAGACAGAGAGATGT 60.105 44.000 17.49 0.00 42.94 3.06
505 506 5.105432 TGGATCTTGTCAAGACAGAGAGATG 60.105 44.000 17.49 0.47 42.94 2.90
506 507 5.022122 TGGATCTTGTCAAGACAGAGAGAT 58.978 41.667 17.49 13.06 42.94 2.75
507 508 4.411013 TGGATCTTGTCAAGACAGAGAGA 58.589 43.478 17.49 11.18 42.94 3.10
508 509 4.797800 TGGATCTTGTCAAGACAGAGAG 57.202 45.455 17.49 7.33 42.94 3.20
509 510 5.551305 TTTGGATCTTGTCAAGACAGAGA 57.449 39.130 17.49 13.48 42.94 3.10
510 511 5.762218 ACTTTTGGATCTTGTCAAGACAGAG 59.238 40.000 17.49 14.16 42.94 3.35
511 512 5.684704 ACTTTTGGATCTTGTCAAGACAGA 58.315 37.500 17.49 5.05 42.94 3.41
512 513 6.204359 CAACTTTTGGATCTTGTCAAGACAG 58.796 40.000 17.49 9.11 42.94 3.51
513 514 6.135290 CAACTTTTGGATCTTGTCAAGACA 57.865 37.500 17.49 9.36 41.01 3.41
524 525 8.126041 TATCTAAGGGATGCCAACTTTTGGATC 61.126 40.741 5.86 8.46 43.19 3.36
525 526 6.354741 TATCTAAGGGATGCCAACTTTTGGAT 60.355 38.462 5.86 6.18 43.19 3.41
575 576 9.601217 GTACAAGATAATTCACCATTAGTCACT 57.399 33.333 0.00 0.00 30.48 3.41
622 624 8.352942 GCAAAATCCTCTTGTATTTAGGGTATG 58.647 37.037 0.00 0.00 0.00 2.39
625 627 6.494059 AGCAAAATCCTCTTGTATTTAGGGT 58.506 36.000 0.00 0.00 0.00 4.34
661 667 9.705103 ATCCACAAGATATGATAATTAATGGGG 57.295 33.333 0.00 0.00 31.60 4.96
684 690 8.953990 CACCGAATTCGATATAAAAACAAATCC 58.046 33.333 28.76 0.00 43.02 3.01
701 707 1.927174 CATCTCGTGACCACCGAATTC 59.073 52.381 0.00 0.00 33.34 2.17
708 714 2.447887 CGCTGCATCTCGTGACCAC 61.448 63.158 0.00 0.00 0.00 4.16
716 722 1.649664 AGACACATTCGCTGCATCTC 58.350 50.000 0.00 0.00 0.00 2.75
861 881 7.814264 ATGCTTCTCCTAATAAATTCCACTG 57.186 36.000 0.00 0.00 0.00 3.66
863 883 8.293157 GCTTATGCTTCTCCTAATAAATTCCAC 58.707 37.037 0.00 0.00 36.03 4.02
912 933 4.214986 TGGTCCAAGAAAATGCTCGATA 57.785 40.909 0.00 0.00 0.00 2.92
919 940 3.067461 TCCGTGTTTGGTCCAAGAAAATG 59.933 43.478 4.09 0.00 0.00 2.32
927 948 1.276989 GGTATCTCCGTGTTTGGTCCA 59.723 52.381 0.00 0.00 0.00 4.02
941 966 5.189180 GCAATTCTCCTTTCACTGGTATCT 58.811 41.667 0.00 0.00 0.00 1.98
942 967 4.943705 TGCAATTCTCCTTTCACTGGTATC 59.056 41.667 0.00 0.00 0.00 2.24
959 984 3.374058 GCGGTACAGAACACTATGCAATT 59.626 43.478 0.00 0.00 0.00 2.32
991 1016 6.155827 TGTTGTTATTTGCCATTGTCTAAGC 58.844 36.000 0.00 0.00 0.00 3.09
997 1022 5.337491 GGAGGATGTTGTTATTTGCCATTGT 60.337 40.000 0.00 0.00 0.00 2.71
1011 1036 4.763793 ACAATGAAGACTTGGAGGATGTTG 59.236 41.667 0.00 0.00 0.00 3.33
1013 1038 4.647564 ACAATGAAGACTTGGAGGATGT 57.352 40.909 0.00 0.00 0.00 3.06
1074 1099 3.337619 GCCTGCACTATCGGCATG 58.662 61.111 8.94 0.00 43.25 4.06
1077 1102 3.275338 GCTGCCTGCACTATCGGC 61.275 66.667 6.96 6.96 44.02 5.54
1113 1138 0.548926 TAGGGCAACAGGGTGGATCA 60.549 55.000 0.00 0.00 39.74 2.92
1114 1139 0.181350 CTAGGGCAACAGGGTGGATC 59.819 60.000 0.00 0.00 39.74 3.36
1121 1146 2.680370 GGGTCCCTAGGGCAACAGG 61.680 68.421 24.42 0.00 39.74 4.00
1122 1147 2.680370 GGGGTCCCTAGGGCAACAG 61.680 68.421 24.42 0.00 39.74 3.16
1125 1150 2.286121 CAGGGGTCCCTAGGGCAA 60.286 66.667 24.42 3.54 46.28 4.52
1139 1164 1.896660 CCGAACCCACAACACCAGG 60.897 63.158 0.00 0.00 0.00 4.45
1142 1167 3.292159 GGCCGAACCCACAACACC 61.292 66.667 0.00 0.00 0.00 4.16
1143 1168 3.656045 CGGCCGAACCCACAACAC 61.656 66.667 24.07 0.00 33.26 3.32
1159 1184 2.405805 TTCCATTGGCCATCACGCG 61.406 57.895 6.09 3.53 0.00 6.01
1181 1206 1.075601 TCAAGGCTTGGTGGAGGATT 58.924 50.000 25.92 0.00 0.00 3.01
1235 1260 4.260990 CGTTGAAGCACATTTTGTAGGACA 60.261 41.667 0.00 0.00 0.00 4.02
1237 1262 3.252215 CCGTTGAAGCACATTTTGTAGGA 59.748 43.478 0.00 0.00 0.00 2.94
1242 1267 2.126467 CCACCGTTGAAGCACATTTTG 58.874 47.619 0.00 0.00 0.00 2.44
1323 1349 5.497474 TCTCCTCCCACTTTTATTAGCAAC 58.503 41.667 0.00 0.00 0.00 4.17
1365 2264 3.890756 TGAATCTCTTTGTGGCACATTGT 59.109 39.130 22.73 2.72 44.52 2.71
1375 2274 5.812127 GGCAAACACTTTTGAATCTCTTTGT 59.188 36.000 1.29 0.00 44.38 2.83
1445 2346 3.131396 CCTTTATGACCGTAGCATGTCC 58.869 50.000 0.00 0.00 0.00 4.02
1637 2538 1.961277 AGCGTCGGACTGCCAAAAG 60.961 57.895 17.10 0.00 0.00 2.27
1647 2549 1.134818 AGCAAATACATCAGCGTCGGA 60.135 47.619 0.00 0.00 0.00 4.55
1688 2590 7.363007 GGGCATAATCTATATGTCGACTCTTGA 60.363 40.741 17.92 8.92 30.75 3.02
1696 2598 4.697514 CAGGGGGCATAATCTATATGTCG 58.302 47.826 0.00 0.00 30.75 4.35
1697 2599 4.455606 GCAGGGGGCATAATCTATATGTC 58.544 47.826 0.00 0.00 43.97 3.06
1698 2600 4.510167 GCAGGGGGCATAATCTATATGT 57.490 45.455 0.00 0.00 43.97 2.29
1711 2613 0.538287 GAAGGTATGATGCAGGGGGC 60.538 60.000 0.00 0.00 45.13 5.80
1712 2614 0.250467 CGAAGGTATGATGCAGGGGG 60.250 60.000 0.00 0.00 0.00 5.40
1713 2615 0.469917 ACGAAGGTATGATGCAGGGG 59.530 55.000 0.00 0.00 0.00 4.79
1714 2616 2.332063 AACGAAGGTATGATGCAGGG 57.668 50.000 0.00 0.00 0.00 4.45
1715 2617 3.270027 TCAAACGAAGGTATGATGCAGG 58.730 45.455 0.00 0.00 0.00 4.85
1716 2618 4.840911 CATCAAACGAAGGTATGATGCAG 58.159 43.478 0.00 0.00 41.69 4.41
1717 2619 4.880886 CATCAAACGAAGGTATGATGCA 57.119 40.909 0.00 0.00 41.69 3.96
1720 2622 3.214328 GGGCATCAAACGAAGGTATGAT 58.786 45.455 0.00 0.00 32.94 2.45
1721 2623 2.639065 GGGCATCAAACGAAGGTATGA 58.361 47.619 0.00 0.00 0.00 2.15
1722 2624 1.676006 GGGGCATCAAACGAAGGTATG 59.324 52.381 0.00 0.00 0.00 2.39
1723 2625 1.564348 AGGGGCATCAAACGAAGGTAT 59.436 47.619 0.00 0.00 0.00 2.73
1724 2626 0.988832 AGGGGCATCAAACGAAGGTA 59.011 50.000 0.00 0.00 0.00 3.08
1725 2627 0.609131 CAGGGGCATCAAACGAAGGT 60.609 55.000 0.00 0.00 0.00 3.50
1726 2628 0.322456 TCAGGGGCATCAAACGAAGG 60.322 55.000 0.00 0.00 0.00 3.46
1727 2629 1.755179 ATCAGGGGCATCAAACGAAG 58.245 50.000 0.00 0.00 0.00 3.79
1728 2630 2.214376 AATCAGGGGCATCAAACGAA 57.786 45.000 0.00 0.00 0.00 3.85
1729 2631 3.358111 TTAATCAGGGGCATCAAACGA 57.642 42.857 0.00 0.00 0.00 3.85
1730 2632 4.097741 TGATTTAATCAGGGGCATCAAACG 59.902 41.667 3.20 0.00 33.59 3.60
1731 2633 5.596836 TGATTTAATCAGGGGCATCAAAC 57.403 39.130 3.20 0.00 33.59 2.93
1732 2634 6.838090 TGTATGATTTAATCAGGGGCATCAAA 59.162 34.615 13.29 0.00 43.53 2.69
1733 2635 6.265196 GTGTATGATTTAATCAGGGGCATCAA 59.735 38.462 13.29 0.00 43.53 2.57
1734 2636 5.769662 GTGTATGATTTAATCAGGGGCATCA 59.230 40.000 13.29 2.70 43.53 3.07
1735 2637 6.006449 AGTGTATGATTTAATCAGGGGCATC 58.994 40.000 13.29 1.31 43.53 3.91
1736 2638 5.957132 AGTGTATGATTTAATCAGGGGCAT 58.043 37.500 13.29 0.00 43.53 4.40
1737 2639 5.387113 AGTGTATGATTTAATCAGGGGCA 57.613 39.130 13.29 6.61 43.53 5.36
1738 2640 8.409358 AATTAGTGTATGATTTAATCAGGGGC 57.591 34.615 13.29 4.48 43.53 5.80
1751 2653 9.320352 ACATTTGCGTGTATAATTAGTGTATGA 57.680 29.630 0.00 0.00 0.00 2.15
1752 2654 9.368921 CACATTTGCGTGTATAATTAGTGTATG 57.631 33.333 0.00 0.00 32.00 2.39
1766 2668 8.736499 TGATCTTAATCGTACACATTTGCGTGT 61.736 37.037 1.95 1.95 42.61 4.49
1767 2669 5.198116 TCTTAATCGTACACATTTGCGTG 57.802 39.130 0.00 0.00 42.81 5.34
1768 2670 5.579119 TGATCTTAATCGTACACATTTGCGT 59.421 36.000 0.00 0.00 34.39 5.24
1769 2671 6.019881 TCTGATCTTAATCGTACACATTTGCG 60.020 38.462 0.00 0.00 34.39 4.85
1770 2672 7.222805 TCTCTGATCTTAATCGTACACATTTGC 59.777 37.037 0.00 0.00 34.39 3.68
1771 2673 8.535592 GTCTCTGATCTTAATCGTACACATTTG 58.464 37.037 0.00 0.00 34.39 2.32
1772 2674 8.470805 AGTCTCTGATCTTAATCGTACACATTT 58.529 33.333 0.00 0.00 34.39 2.32
1773 2675 8.001881 AGTCTCTGATCTTAATCGTACACATT 57.998 34.615 0.00 0.00 34.39 2.71
1774 2676 7.283354 TGAGTCTCTGATCTTAATCGTACACAT 59.717 37.037 0.65 0.00 34.39 3.21
1775 2677 6.598064 TGAGTCTCTGATCTTAATCGTACACA 59.402 38.462 0.65 0.00 34.39 3.72
1776 2678 6.908284 GTGAGTCTCTGATCTTAATCGTACAC 59.092 42.308 0.65 0.00 34.39 2.90
1777 2679 6.238130 CGTGAGTCTCTGATCTTAATCGTACA 60.238 42.308 0.65 0.00 34.39 2.90
1778 2680 6.130723 CGTGAGTCTCTGATCTTAATCGTAC 58.869 44.000 0.65 0.00 34.39 3.67
1779 2681 5.236695 CCGTGAGTCTCTGATCTTAATCGTA 59.763 44.000 0.65 0.00 34.39 3.43
1780 2682 4.035792 CCGTGAGTCTCTGATCTTAATCGT 59.964 45.833 0.65 0.00 34.39 3.73
1781 2683 4.532276 CCGTGAGTCTCTGATCTTAATCG 58.468 47.826 0.65 0.00 34.39 3.34
1782 2684 4.580995 TCCCGTGAGTCTCTGATCTTAATC 59.419 45.833 0.65 0.00 0.00 1.75
1783 2685 4.537751 TCCCGTGAGTCTCTGATCTTAAT 58.462 43.478 0.65 0.00 0.00 1.40
1784 2686 3.964411 TCCCGTGAGTCTCTGATCTTAA 58.036 45.455 0.65 0.00 0.00 1.85
1785 2687 3.646736 TCCCGTGAGTCTCTGATCTTA 57.353 47.619 0.65 0.00 0.00 2.10
1786 2688 2.516227 TCCCGTGAGTCTCTGATCTT 57.484 50.000 0.65 0.00 0.00 2.40
1787 2689 2.025793 TCTTCCCGTGAGTCTCTGATCT 60.026 50.000 0.65 0.00 0.00 2.75
1788 2690 2.370349 TCTTCCCGTGAGTCTCTGATC 58.630 52.381 0.65 0.00 0.00 2.92
1789 2691 2.516227 TCTTCCCGTGAGTCTCTGAT 57.484 50.000 0.65 0.00 0.00 2.90
1790 2692 2.516227 ATCTTCCCGTGAGTCTCTGA 57.484 50.000 0.65 0.00 0.00 3.27
1791 2693 3.885901 TGATATCTTCCCGTGAGTCTCTG 59.114 47.826 3.98 0.00 0.00 3.35
1792 2694 3.886505 GTGATATCTTCCCGTGAGTCTCT 59.113 47.826 3.98 0.00 0.00 3.10
1793 2695 3.632604 TGTGATATCTTCCCGTGAGTCTC 59.367 47.826 3.98 0.00 0.00 3.36
1794 2696 3.632333 TGTGATATCTTCCCGTGAGTCT 58.368 45.455 3.98 0.00 0.00 3.24
1795 2697 4.113354 GTTGTGATATCTTCCCGTGAGTC 58.887 47.826 3.98 0.00 0.00 3.36
1796 2698 3.513912 TGTTGTGATATCTTCCCGTGAGT 59.486 43.478 3.98 0.00 0.00 3.41
1797 2699 3.865745 GTGTTGTGATATCTTCCCGTGAG 59.134 47.826 3.98 0.00 0.00 3.51
1798 2700 3.259625 TGTGTTGTGATATCTTCCCGTGA 59.740 43.478 3.98 0.00 0.00 4.35
1799 2701 3.595173 TGTGTTGTGATATCTTCCCGTG 58.405 45.455 3.98 0.00 0.00 4.94
1800 2702 3.973206 TGTGTTGTGATATCTTCCCGT 57.027 42.857 3.98 0.00 0.00 5.28
1801 2703 4.000325 TGTTGTGTTGTGATATCTTCCCG 59.000 43.478 3.98 0.00 0.00 5.14
1802 2704 5.003804 AGTGTTGTGTTGTGATATCTTCCC 58.996 41.667 3.98 0.00 0.00 3.97
1803 2705 7.063544 GTCTAGTGTTGTGTTGTGATATCTTCC 59.936 40.741 3.98 0.00 0.00 3.46
1804 2706 7.598869 TGTCTAGTGTTGTGTTGTGATATCTTC 59.401 37.037 3.98 0.00 0.00 2.87
1805 2707 7.385205 GTGTCTAGTGTTGTGTTGTGATATCTT 59.615 37.037 3.98 0.00 0.00 2.40
1806 2708 6.868864 GTGTCTAGTGTTGTGTTGTGATATCT 59.131 38.462 3.98 0.00 0.00 1.98
1807 2709 6.645003 TGTGTCTAGTGTTGTGTTGTGATATC 59.355 38.462 0.00 0.00 0.00 1.63
1808 2710 6.521162 TGTGTCTAGTGTTGTGTTGTGATAT 58.479 36.000 0.00 0.00 0.00 1.63
1809 2711 5.908341 TGTGTCTAGTGTTGTGTTGTGATA 58.092 37.500 0.00 0.00 0.00 2.15
1810 2712 4.765273 TGTGTCTAGTGTTGTGTTGTGAT 58.235 39.130 0.00 0.00 0.00 3.06
1811 2713 4.195225 TGTGTCTAGTGTTGTGTTGTGA 57.805 40.909 0.00 0.00 0.00 3.58
1812 2714 4.937696 TTGTGTCTAGTGTTGTGTTGTG 57.062 40.909 0.00 0.00 0.00 3.33
1813 2715 6.509418 AATTTGTGTCTAGTGTTGTGTTGT 57.491 33.333 0.00 0.00 0.00 3.32
1814 2716 8.903570 TTAAATTTGTGTCTAGTGTTGTGTTG 57.096 30.769 0.00 0.00 0.00 3.33
1815 2717 9.915629 TTTTAAATTTGTGTCTAGTGTTGTGTT 57.084 25.926 0.00 0.00 0.00 3.32
1844 2746 9.131791 CCCTGGCTTGTAATATAAAACTTGTAT 57.868 33.333 0.00 0.00 0.00 2.29
1845 2747 7.558444 CCCCTGGCTTGTAATATAAAACTTGTA 59.442 37.037 0.00 0.00 0.00 2.41
1846 2748 6.379988 CCCCTGGCTTGTAATATAAAACTTGT 59.620 38.462 0.00 0.00 0.00 3.16
1847 2749 6.682861 GCCCCTGGCTTGTAATATAAAACTTG 60.683 42.308 0.00 0.00 46.69 3.16
1848 2750 5.362717 GCCCCTGGCTTGTAATATAAAACTT 59.637 40.000 0.00 0.00 46.69 2.66
1849 2751 4.893524 GCCCCTGGCTTGTAATATAAAACT 59.106 41.667 0.00 0.00 46.69 2.66
1850 2752 5.196341 GCCCCTGGCTTGTAATATAAAAC 57.804 43.478 0.00 0.00 46.69 2.43
1883 2785 3.614588 TCGTGTATCGAGCTTGTATTCG 58.385 45.455 0.00 2.04 44.01 3.34
1894 2796 3.504863 GGTTAAGTTGCTCGTGTATCGA 58.495 45.455 0.00 0.00 46.83 3.59
1895 2797 2.601763 GGGTTAAGTTGCTCGTGTATCG 59.398 50.000 0.00 0.00 41.41 2.92
1896 2798 2.934553 GGGGTTAAGTTGCTCGTGTATC 59.065 50.000 0.00 0.00 0.00 2.24
1897 2799 2.303600 TGGGGTTAAGTTGCTCGTGTAT 59.696 45.455 0.00 0.00 0.00 2.29
1898 2800 1.693062 TGGGGTTAAGTTGCTCGTGTA 59.307 47.619 0.00 0.00 0.00 2.90
1899 2801 0.470766 TGGGGTTAAGTTGCTCGTGT 59.529 50.000 0.00 0.00 0.00 4.49
1900 2802 1.468520 CATGGGGTTAAGTTGCTCGTG 59.531 52.381 0.00 0.00 0.00 4.35
1901 2803 1.821216 CATGGGGTTAAGTTGCTCGT 58.179 50.000 0.00 0.00 0.00 4.18
1936 2843 4.379499 GGTTGAGTAAGATTTCTTTGGCGG 60.379 45.833 0.00 0.00 37.40 6.13
2019 3372 0.897401 TGCCATGAAACAATCGGCCA 60.897 50.000 2.24 0.00 42.27 5.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.