Multiple sequence alignment - TraesCS1B01G459600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G459600 chr1B 100.000 5809 0 0 1 5809 673740709 673746517 0.000000e+00 10728.0
1 TraesCS1B01G459600 chr1B 94.203 69 3 1 177 244 11931557 11931625 2.860000e-18 104.0
2 TraesCS1B01G459600 chr1D 92.455 4811 222 47 322 5085 483512332 483517048 0.000000e+00 6743.0
3 TraesCS1B01G459600 chr1D 90.551 381 22 9 5238 5613 483517336 483517707 5.230000e-135 492.0
4 TraesCS1B01G459600 chr1D 88.158 76 4 5 5173 5243 483519518 483519593 1.040000e-12 86.1
5 TraesCS1B01G459600 chr1A 91.191 4155 233 45 322 4415 580420190 580424272 0.000000e+00 5522.0
6 TraesCS1B01G459600 chr1A 94.730 797 28 10 4449 5240 580424266 580425053 0.000000e+00 1227.0
7 TraesCS1B01G459600 chr1A 86.939 490 19 16 5238 5703 580425091 580425559 5.190000e-140 508.0
8 TraesCS1B01G459600 chr3D 82.971 276 44 1 2761 3033 312889709 312889984 4.500000e-61 246.0
9 TraesCS1B01G459600 chr3B 85.652 230 33 0 2804 3033 407187263 407187034 5.820000e-60 243.0
10 TraesCS1B01G459600 chr3A 84.348 230 36 0 2804 3033 419540694 419540465 5.860000e-55 226.0
11 TraesCS1B01G459600 chr2B 92.222 90 6 1 158 246 41130864 41130953 6.110000e-25 126.0
12 TraesCS1B01G459600 chr2B 88.636 88 9 1 160 246 793327973 793328060 7.960000e-19 106.0
13 TraesCS1B01G459600 chr2B 86.207 87 10 1 160 246 657980191 657980275 6.200000e-15 93.5
14 TraesCS1B01G459600 chr5B 88.119 101 9 3 160 259 677578632 677578534 3.680000e-22 117.0
15 TraesCS1B01G459600 chr7B 89.888 89 8 1 159 246 372321938 372322026 4.760000e-21 113.0
16 TraesCS1B01G459600 chr4D 88.636 88 9 1 160 246 500680577 500680664 7.960000e-19 106.0
17 TraesCS1B01G459600 chr2D 84.466 103 10 5 156 257 602725638 602725541 4.790000e-16 97.1
18 TraesCS1B01G459600 chr4B 87.805 82 8 2 177 257 652965780 652965700 1.720000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G459600 chr1B 673740709 673746517 5808 False 10728.000000 10728 100.000000 1 5809 1 chr1B.!!$F2 5808
1 TraesCS1B01G459600 chr1D 483512332 483519593 7261 False 2440.366667 6743 90.388000 322 5613 3 chr1D.!!$F1 5291
2 TraesCS1B01G459600 chr1A 580420190 580425559 5369 False 2419.000000 5522 90.953333 322 5703 3 chr1A.!!$F1 5381

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
88 89 0.168128 GGATGCGAGTTTTTGTCGGG 59.832 55.0 0.00 0.0 37.91 5.14 F
290 291 0.251297 CCATTGTCAGTCCCAAGCCA 60.251 55.0 0.00 0.0 0.00 4.75 F
1707 1731 0.247736 AGTACTTCAGCAAGAGGGCG 59.752 55.0 0.00 0.0 39.27 6.13 F
2422 2452 0.320421 TGGAGAAACCGCGAAGAAGG 60.320 55.0 8.23 0.0 42.61 3.46 F
2940 2970 1.948104 TGGACAGTGTCAAGGTTTCG 58.052 50.0 24.20 0.0 33.68 3.46 F
3509 3569 2.178912 TTGTCCGCCTTTAACCAGAG 57.821 50.0 0.00 0.0 0.00 3.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1686 1710 1.276421 GCCCTCTTGCTGAAGTACTCA 59.724 52.381 0.00 0.00 0.00 3.41 R
2163 2193 0.177604 CCTGACTGTCTGCATCTCCC 59.822 60.000 9.51 0.00 0.00 4.30 R
3263 3301 0.107508 AGTGGAATCAGGCATGGTCG 60.108 55.000 0.00 0.00 0.00 4.79 R
4349 4435 0.042731 AGTCCCCTGCTGCTAGGTAA 59.957 55.000 14.25 2.91 36.02 2.85 R
4350 4436 0.687757 CAGTCCCCTGCTGCTAGGTA 60.688 60.000 14.25 3.17 36.02 3.08 R
5259 5494 0.391597 TCCGGAACAAGACAGGTGTC 59.608 55.000 0.00 1.60 45.08 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.853555 AGTATATTGCATTTCAACGAAATTTGA 57.146 25.926 0.00 0.00 39.82 2.69
29 30 7.712264 ATTGCATTTCAACGAAATTTGAAGA 57.288 28.000 0.00 0.00 44.33 2.87
30 31 6.509317 TGCATTTCAACGAAATTTGAAGAC 57.491 33.333 0.00 0.00 44.33 3.01
31 32 6.038985 TGCATTTCAACGAAATTTGAAGACA 58.961 32.000 0.00 0.00 44.33 3.41
32 33 6.533012 TGCATTTCAACGAAATTTGAAGACAA 59.467 30.769 0.00 0.00 44.33 3.18
33 34 7.063898 TGCATTTCAACGAAATTTGAAGACAAA 59.936 29.630 0.00 0.00 44.33 2.83
46 47 6.688073 TTGAAGACAAATTAGGGAGTCTCT 57.312 37.500 0.00 0.00 40.22 3.10
47 48 6.688073 TGAAGACAAATTAGGGAGTCTCTT 57.312 37.500 0.00 0.00 40.22 2.85
48 49 7.079451 TGAAGACAAATTAGGGAGTCTCTTT 57.921 36.000 0.00 0.00 40.22 2.52
49 50 7.162082 TGAAGACAAATTAGGGAGTCTCTTTC 58.838 38.462 0.00 0.00 40.22 2.62
50 51 6.688073 AGACAAATTAGGGAGTCTCTTTCA 57.312 37.500 0.00 0.00 36.69 2.69
51 52 6.706295 AGACAAATTAGGGAGTCTCTTTCAG 58.294 40.000 0.00 0.00 36.69 3.02
52 53 6.271159 AGACAAATTAGGGAGTCTCTTTCAGT 59.729 38.462 0.00 0.00 36.69 3.41
53 54 6.468543 ACAAATTAGGGAGTCTCTTTCAGTC 58.531 40.000 0.00 0.00 0.00 3.51
54 55 4.993029 ATTAGGGAGTCTCTTTCAGTCG 57.007 45.455 0.00 0.00 0.00 4.18
55 56 2.588464 AGGGAGTCTCTTTCAGTCGA 57.412 50.000 0.00 0.00 0.00 4.20
56 57 2.877866 AGGGAGTCTCTTTCAGTCGAA 58.122 47.619 0.00 0.00 0.00 3.71
57 58 3.231818 AGGGAGTCTCTTTCAGTCGAAA 58.768 45.455 0.00 0.00 38.83 3.46
58 59 3.641906 AGGGAGTCTCTTTCAGTCGAAAA 59.358 43.478 0.00 0.00 40.57 2.29
59 60 4.284746 AGGGAGTCTCTTTCAGTCGAAAAT 59.715 41.667 0.00 0.00 40.57 1.82
60 61 5.480772 AGGGAGTCTCTTTCAGTCGAAAATA 59.519 40.000 0.00 0.00 40.57 1.40
61 62 6.155393 AGGGAGTCTCTTTCAGTCGAAAATAT 59.845 38.462 0.00 0.00 40.57 1.28
62 63 6.477360 GGGAGTCTCTTTCAGTCGAAAATATC 59.523 42.308 0.00 0.00 40.57 1.63
63 64 7.262048 GGAGTCTCTTTCAGTCGAAAATATCT 58.738 38.462 0.00 0.00 40.57 1.98
64 65 7.221838 GGAGTCTCTTTCAGTCGAAAATATCTG 59.778 40.741 0.00 0.00 40.57 2.90
65 66 7.607250 AGTCTCTTTCAGTCGAAAATATCTGT 58.393 34.615 0.00 0.00 40.57 3.41
66 67 7.543868 AGTCTCTTTCAGTCGAAAATATCTGTG 59.456 37.037 0.00 0.00 40.57 3.66
67 68 6.813649 TCTCTTTCAGTCGAAAATATCTGTGG 59.186 38.462 0.00 0.00 40.57 4.17
68 69 6.464222 TCTTTCAGTCGAAAATATCTGTGGT 58.536 36.000 0.00 0.00 40.57 4.16
69 70 6.368791 TCTTTCAGTCGAAAATATCTGTGGTG 59.631 38.462 0.00 0.00 40.57 4.17
70 71 4.503910 TCAGTCGAAAATATCTGTGGTGG 58.496 43.478 0.00 0.00 0.00 4.61
71 72 4.221924 TCAGTCGAAAATATCTGTGGTGGA 59.778 41.667 0.00 0.00 0.00 4.02
72 73 5.104941 TCAGTCGAAAATATCTGTGGTGGAT 60.105 40.000 0.00 0.00 0.00 3.41
73 74 5.007039 CAGTCGAAAATATCTGTGGTGGATG 59.993 44.000 0.00 0.00 0.00 3.51
74 75 3.876914 TCGAAAATATCTGTGGTGGATGC 59.123 43.478 0.00 0.00 0.00 3.91
75 76 3.303329 CGAAAATATCTGTGGTGGATGCG 60.303 47.826 0.00 0.00 0.00 4.73
76 77 3.558931 AAATATCTGTGGTGGATGCGA 57.441 42.857 0.00 0.00 0.00 5.10
77 78 2.827800 ATATCTGTGGTGGATGCGAG 57.172 50.000 0.00 0.00 0.00 5.03
78 79 1.485124 TATCTGTGGTGGATGCGAGT 58.515 50.000 0.00 0.00 0.00 4.18
79 80 0.615331 ATCTGTGGTGGATGCGAGTT 59.385 50.000 0.00 0.00 0.00 3.01
80 81 0.396435 TCTGTGGTGGATGCGAGTTT 59.604 50.000 0.00 0.00 0.00 2.66
81 82 1.202758 TCTGTGGTGGATGCGAGTTTT 60.203 47.619 0.00 0.00 0.00 2.43
82 83 1.608590 CTGTGGTGGATGCGAGTTTTT 59.391 47.619 0.00 0.00 0.00 1.94
83 84 1.336440 TGTGGTGGATGCGAGTTTTTG 59.664 47.619 0.00 0.00 0.00 2.44
84 85 1.336755 GTGGTGGATGCGAGTTTTTGT 59.663 47.619 0.00 0.00 0.00 2.83
85 86 1.606668 TGGTGGATGCGAGTTTTTGTC 59.393 47.619 0.00 0.00 0.00 3.18
86 87 1.399727 GGTGGATGCGAGTTTTTGTCG 60.400 52.381 0.00 0.00 40.50 4.35
87 88 0.871722 TGGATGCGAGTTTTTGTCGG 59.128 50.000 0.00 0.00 37.91 4.79
88 89 0.168128 GGATGCGAGTTTTTGTCGGG 59.832 55.000 0.00 0.00 37.91 5.14
89 90 1.153353 GATGCGAGTTTTTGTCGGGA 58.847 50.000 0.00 0.00 37.91 5.14
90 91 1.533731 GATGCGAGTTTTTGTCGGGAA 59.466 47.619 0.00 0.00 37.91 3.97
91 92 0.941542 TGCGAGTTTTTGTCGGGAAG 59.058 50.000 0.00 0.00 37.91 3.46
92 93 1.223187 GCGAGTTTTTGTCGGGAAGA 58.777 50.000 0.00 0.00 37.91 2.87
101 102 3.606886 GTCGGGAAGACTCTGCAAA 57.393 52.632 0.00 0.00 46.13 3.68
102 103 2.100605 GTCGGGAAGACTCTGCAAAT 57.899 50.000 0.00 0.00 46.13 2.32
103 104 3.247006 GTCGGGAAGACTCTGCAAATA 57.753 47.619 0.00 0.00 46.13 1.40
104 105 3.190874 GTCGGGAAGACTCTGCAAATAG 58.809 50.000 0.00 0.00 46.13 1.73
105 106 3.096852 TCGGGAAGACTCTGCAAATAGA 58.903 45.455 0.00 0.00 0.00 1.98
106 107 3.513912 TCGGGAAGACTCTGCAAATAGAA 59.486 43.478 0.00 0.00 0.00 2.10
107 108 4.162320 TCGGGAAGACTCTGCAAATAGAAT 59.838 41.667 0.00 0.00 0.00 2.40
108 109 4.509600 CGGGAAGACTCTGCAAATAGAATC 59.490 45.833 0.00 0.00 0.00 2.52
109 110 5.431765 GGGAAGACTCTGCAAATAGAATCA 58.568 41.667 0.00 0.00 0.00 2.57
110 111 5.882557 GGGAAGACTCTGCAAATAGAATCAA 59.117 40.000 0.00 0.00 0.00 2.57
111 112 6.038050 GGGAAGACTCTGCAAATAGAATCAAG 59.962 42.308 0.00 0.00 0.00 3.02
112 113 6.820656 GGAAGACTCTGCAAATAGAATCAAGA 59.179 38.462 0.00 0.00 0.00 3.02
113 114 7.335422 GGAAGACTCTGCAAATAGAATCAAGAA 59.665 37.037 0.00 0.00 0.00 2.52
114 115 8.627208 AAGACTCTGCAAATAGAATCAAGAAA 57.373 30.769 0.00 0.00 0.00 2.52
115 116 8.627208 AGACTCTGCAAATAGAATCAAGAAAA 57.373 30.769 0.00 0.00 0.00 2.29
116 117 8.510505 AGACTCTGCAAATAGAATCAAGAAAAC 58.489 33.333 0.00 0.00 0.00 2.43
117 118 7.301054 ACTCTGCAAATAGAATCAAGAAAACG 58.699 34.615 0.00 0.00 0.00 3.60
118 119 6.611381 TCTGCAAATAGAATCAAGAAAACGG 58.389 36.000 0.00 0.00 0.00 4.44
119 120 6.429692 TCTGCAAATAGAATCAAGAAAACGGA 59.570 34.615 0.00 0.00 0.00 4.69
120 121 6.611381 TGCAAATAGAATCAAGAAAACGGAG 58.389 36.000 0.00 0.00 0.00 4.63
121 122 6.030228 GCAAATAGAATCAAGAAAACGGAGG 58.970 40.000 0.00 0.00 0.00 4.30
122 123 6.349363 GCAAATAGAATCAAGAAAACGGAGGT 60.349 38.462 0.00 0.00 0.00 3.85
123 124 6.743575 AATAGAATCAAGAAAACGGAGGTG 57.256 37.500 0.00 0.00 0.00 4.00
124 125 2.814336 AGAATCAAGAAAACGGAGGTGC 59.186 45.455 0.00 0.00 0.00 5.01
125 126 2.270352 ATCAAGAAAACGGAGGTGCA 57.730 45.000 0.00 0.00 0.00 4.57
126 127 2.270352 TCAAGAAAACGGAGGTGCAT 57.730 45.000 0.00 0.00 0.00 3.96
127 128 1.879380 TCAAGAAAACGGAGGTGCATG 59.121 47.619 0.00 0.00 0.00 4.06
128 129 1.879380 CAAGAAAACGGAGGTGCATGA 59.121 47.619 0.00 0.00 0.00 3.07
129 130 2.489329 CAAGAAAACGGAGGTGCATGAT 59.511 45.455 0.00 0.00 0.00 2.45
130 131 2.795329 AGAAAACGGAGGTGCATGATT 58.205 42.857 0.00 0.00 0.00 2.57
131 132 3.950397 AGAAAACGGAGGTGCATGATTA 58.050 40.909 0.00 0.00 0.00 1.75
132 133 4.331968 AGAAAACGGAGGTGCATGATTAA 58.668 39.130 0.00 0.00 0.00 1.40
133 134 4.949856 AGAAAACGGAGGTGCATGATTAAT 59.050 37.500 0.00 0.00 0.00 1.40
134 135 5.418840 AGAAAACGGAGGTGCATGATTAATT 59.581 36.000 0.00 0.00 0.00 1.40
135 136 6.601613 AGAAAACGGAGGTGCATGATTAATTA 59.398 34.615 0.00 0.00 0.00 1.40
136 137 6.767524 AAACGGAGGTGCATGATTAATTAA 57.232 33.333 0.00 0.00 0.00 1.40
137 138 6.959639 AACGGAGGTGCATGATTAATTAAT 57.040 33.333 10.51 10.51 0.00 1.40
138 139 6.959639 ACGGAGGTGCATGATTAATTAATT 57.040 33.333 11.92 5.89 0.00 1.40
139 140 6.738114 ACGGAGGTGCATGATTAATTAATTG 58.262 36.000 11.92 8.51 0.00 2.32
140 141 6.151691 CGGAGGTGCATGATTAATTAATTGG 58.848 40.000 11.92 6.31 0.00 3.16
141 142 6.458210 GGAGGTGCATGATTAATTAATTGGG 58.542 40.000 11.92 6.00 0.00 4.12
142 143 5.857268 AGGTGCATGATTAATTAATTGGGC 58.143 37.500 11.92 14.40 0.00 5.36
143 144 5.366186 AGGTGCATGATTAATTAATTGGGCA 59.634 36.000 19.19 19.19 0.00 5.36
144 145 6.043474 AGGTGCATGATTAATTAATTGGGCAT 59.957 34.615 22.85 14.95 32.18 4.40
145 146 6.711645 GGTGCATGATTAATTAATTGGGCATT 59.288 34.615 22.85 0.70 32.18 3.56
146 147 7.229106 GGTGCATGATTAATTAATTGGGCATTT 59.771 33.333 22.85 0.12 32.18 2.32
147 148 8.623030 GTGCATGATTAATTAATTGGGCATTTT 58.377 29.630 22.85 0.00 32.18 1.82
148 149 9.186837 TGCATGATTAATTAATTGGGCATTTTT 57.813 25.926 19.19 0.00 0.00 1.94
169 170 5.587388 TTTCTTGGGTACTACTACATCCG 57.413 43.478 0.00 0.00 0.00 4.18
170 171 4.240881 TCTTGGGTACTACTACATCCGT 57.759 45.455 0.00 0.00 0.00 4.69
171 172 4.202441 TCTTGGGTACTACTACATCCGTC 58.798 47.826 0.00 0.00 0.00 4.79
172 173 3.939740 TGGGTACTACTACATCCGTCT 57.060 47.619 0.00 0.00 0.00 4.18
173 174 4.240881 TGGGTACTACTACATCCGTCTT 57.759 45.455 0.00 0.00 0.00 3.01
174 175 4.603131 TGGGTACTACTACATCCGTCTTT 58.397 43.478 0.00 0.00 0.00 2.52
175 176 4.400251 TGGGTACTACTACATCCGTCTTTG 59.600 45.833 0.00 0.00 0.00 2.77
176 177 4.400567 GGGTACTACTACATCCGTCTTTGT 59.599 45.833 0.00 0.00 0.00 2.83
177 178 5.105595 GGGTACTACTACATCCGTCTTTGTT 60.106 44.000 0.00 0.00 0.00 2.83
178 179 6.393171 GGTACTACTACATCCGTCTTTGTTT 58.607 40.000 0.00 0.00 0.00 2.83
179 180 7.362920 GGGTACTACTACATCCGTCTTTGTTTA 60.363 40.741 0.00 0.00 0.00 2.01
180 181 8.193438 GGTACTACTACATCCGTCTTTGTTTAT 58.807 37.037 0.00 0.00 0.00 1.40
181 182 9.578439 GTACTACTACATCCGTCTTTGTTTATT 57.422 33.333 0.00 0.00 0.00 1.40
182 183 8.475331 ACTACTACATCCGTCTTTGTTTATTG 57.525 34.615 0.00 0.00 0.00 1.90
183 184 6.737254 ACTACATCCGTCTTTGTTTATTGG 57.263 37.500 0.00 0.00 0.00 3.16
184 185 6.235664 ACTACATCCGTCTTTGTTTATTGGT 58.764 36.000 0.00 0.00 0.00 3.67
185 186 5.622770 ACATCCGTCTTTGTTTATTGGTC 57.377 39.130 0.00 0.00 0.00 4.02
186 187 4.457949 ACATCCGTCTTTGTTTATTGGTCC 59.542 41.667 0.00 0.00 0.00 4.46
187 188 4.360951 TCCGTCTTTGTTTATTGGTCCT 57.639 40.909 0.00 0.00 0.00 3.85
188 189 4.320870 TCCGTCTTTGTTTATTGGTCCTC 58.679 43.478 0.00 0.00 0.00 3.71
189 190 4.041198 TCCGTCTTTGTTTATTGGTCCTCT 59.959 41.667 0.00 0.00 0.00 3.69
190 191 4.760204 CCGTCTTTGTTTATTGGTCCTCTT 59.240 41.667 0.00 0.00 0.00 2.85
191 192 5.106673 CCGTCTTTGTTTATTGGTCCTCTTC 60.107 44.000 0.00 0.00 0.00 2.87
192 193 5.389516 CGTCTTTGTTTATTGGTCCTCTTCG 60.390 44.000 0.00 0.00 0.00 3.79
193 194 5.469084 GTCTTTGTTTATTGGTCCTCTTCGT 59.531 40.000 0.00 0.00 0.00 3.85
194 195 6.017357 GTCTTTGTTTATTGGTCCTCTTCGTT 60.017 38.462 0.00 0.00 0.00 3.85
195 196 6.544564 TCTTTGTTTATTGGTCCTCTTCGTTT 59.455 34.615 0.00 0.00 0.00 3.60
196 197 6.702716 TTGTTTATTGGTCCTCTTCGTTTT 57.297 33.333 0.00 0.00 0.00 2.43
197 198 6.702716 TGTTTATTGGTCCTCTTCGTTTTT 57.297 33.333 0.00 0.00 0.00 1.94
198 199 6.500041 TGTTTATTGGTCCTCTTCGTTTTTG 58.500 36.000 0.00 0.00 0.00 2.44
199 200 6.095720 TGTTTATTGGTCCTCTTCGTTTTTGT 59.904 34.615 0.00 0.00 0.00 2.83
200 201 4.568152 ATTGGTCCTCTTCGTTTTTGTG 57.432 40.909 0.00 0.00 0.00 3.33
201 202 2.993937 TGGTCCTCTTCGTTTTTGTGT 58.006 42.857 0.00 0.00 0.00 3.72
202 203 2.940410 TGGTCCTCTTCGTTTTTGTGTC 59.060 45.455 0.00 0.00 0.00 3.67
203 204 2.940410 GGTCCTCTTCGTTTTTGTGTCA 59.060 45.455 0.00 0.00 0.00 3.58
204 205 3.375922 GGTCCTCTTCGTTTTTGTGTCAA 59.624 43.478 0.00 0.00 0.00 3.18
205 206 4.142556 GGTCCTCTTCGTTTTTGTGTCAAA 60.143 41.667 0.00 0.00 0.00 2.69
206 207 5.395642 GTCCTCTTCGTTTTTGTGTCAAAA 58.604 37.500 3.93 3.93 0.00 2.44
207 208 6.033966 GTCCTCTTCGTTTTTGTGTCAAAAT 58.966 36.000 8.18 0.00 0.00 1.82
208 209 6.530181 GTCCTCTTCGTTTTTGTGTCAAAATT 59.470 34.615 8.18 0.00 0.00 1.82
209 210 7.062956 GTCCTCTTCGTTTTTGTGTCAAAATTT 59.937 33.333 8.18 0.00 0.00 1.82
210 211 7.062839 TCCTCTTCGTTTTTGTGTCAAAATTTG 59.937 33.333 8.18 0.00 0.00 2.32
211 212 7.062839 CCTCTTCGTTTTTGTGTCAAAATTTGA 59.937 33.333 4.03 4.03 37.33 2.69
212 213 8.472683 TCTTCGTTTTTGTGTCAAAATTTGAT 57.527 26.923 11.87 0.00 42.47 2.57
213 214 8.591312 TCTTCGTTTTTGTGTCAAAATTTGATC 58.409 29.630 11.87 8.87 42.47 2.92
214 215 7.818493 TCGTTTTTGTGTCAAAATTTGATCA 57.182 28.000 11.87 11.15 42.47 2.92
215 216 8.417780 TCGTTTTTGTGTCAAAATTTGATCAT 57.582 26.923 11.87 0.00 42.47 2.45
216 217 9.521503 TCGTTTTTGTGTCAAAATTTGATCATA 57.478 25.926 11.87 7.48 42.47 2.15
217 218 9.782028 CGTTTTTGTGTCAAAATTTGATCATAG 57.218 29.630 11.87 2.57 42.47 2.23
248 249 8.659925 ACTGACAAAATTTTAATGCATGTTGA 57.340 26.923 0.00 0.00 0.00 3.18
249 250 9.275398 ACTGACAAAATTTTAATGCATGTTGAT 57.725 25.926 0.00 0.00 0.00 2.57
250 251 9.749490 CTGACAAAATTTTAATGCATGTTGATC 57.251 29.630 0.00 0.00 0.00 2.92
251 252 8.433893 TGACAAAATTTTAATGCATGTTGATCG 58.566 29.630 0.00 0.00 0.00 3.69
252 253 8.531622 ACAAAATTTTAATGCATGTTGATCGA 57.468 26.923 0.00 0.00 0.00 3.59
253 254 8.986847 ACAAAATTTTAATGCATGTTGATCGAA 58.013 25.926 0.00 0.00 0.00 3.71
254 255 9.808808 CAAAATTTTAATGCATGTTGATCGAAA 57.191 25.926 0.00 0.00 0.00 3.46
261 262 7.894376 AATGCATGTTGATCGAAAATTTTCT 57.106 28.000 24.53 10.33 35.07 2.52
262 263 7.894376 ATGCATGTTGATCGAAAATTTTCTT 57.106 28.000 24.53 14.21 35.07 2.52
263 264 7.107834 TGCATGTTGATCGAAAATTTTCTTG 57.892 32.000 24.53 12.89 35.07 3.02
264 265 6.145858 TGCATGTTGATCGAAAATTTTCTTGG 59.854 34.615 24.53 12.26 35.07 3.61
265 266 6.401367 GCATGTTGATCGAAAATTTTCTTGGG 60.401 38.462 24.53 11.95 35.07 4.12
266 267 6.155475 TGTTGATCGAAAATTTTCTTGGGT 57.845 33.333 24.53 9.13 35.07 4.51
267 268 7.278461 TGTTGATCGAAAATTTTCTTGGGTA 57.722 32.000 24.53 7.19 35.07 3.69
268 269 7.367285 TGTTGATCGAAAATTTTCTTGGGTAG 58.633 34.615 24.53 10.41 35.07 3.18
269 270 7.013846 TGTTGATCGAAAATTTTCTTGGGTAGT 59.986 33.333 24.53 5.50 35.07 2.73
270 271 6.908825 TGATCGAAAATTTTCTTGGGTAGTG 58.091 36.000 24.53 9.18 35.07 2.74
271 272 5.116069 TCGAAAATTTTCTTGGGTAGTGC 57.884 39.130 24.53 0.00 35.07 4.40
272 273 4.022676 TCGAAAATTTTCTTGGGTAGTGCC 60.023 41.667 24.53 0.00 35.07 5.01
273 274 4.261825 CGAAAATTTTCTTGGGTAGTGCCA 60.262 41.667 24.53 0.00 35.47 4.92
274 275 5.566627 CGAAAATTTTCTTGGGTAGTGCCAT 60.567 40.000 24.53 0.00 35.47 4.40
275 276 5.823861 AAATTTTCTTGGGTAGTGCCATT 57.176 34.783 0.00 0.00 39.65 3.16
276 277 4.806640 ATTTTCTTGGGTAGTGCCATTG 57.193 40.909 0.00 0.00 39.65 2.82
277 278 2.969821 TTCTTGGGTAGTGCCATTGT 57.030 45.000 0.00 0.00 39.65 2.71
278 279 2.489938 TCTTGGGTAGTGCCATTGTC 57.510 50.000 0.00 0.00 39.65 3.18
279 280 1.702401 TCTTGGGTAGTGCCATTGTCA 59.298 47.619 0.00 0.00 39.65 3.58
280 281 2.086869 CTTGGGTAGTGCCATTGTCAG 58.913 52.381 0.00 0.00 39.65 3.51
281 282 1.064003 TGGGTAGTGCCATTGTCAGT 58.936 50.000 0.00 0.00 39.65 3.41
282 283 1.003118 TGGGTAGTGCCATTGTCAGTC 59.997 52.381 0.00 0.00 39.65 3.51
283 284 1.679032 GGGTAGTGCCATTGTCAGTCC 60.679 57.143 0.00 0.00 39.65 3.85
284 285 1.679032 GGTAGTGCCATTGTCAGTCCC 60.679 57.143 0.00 0.00 37.17 4.46
285 286 1.003118 GTAGTGCCATTGTCAGTCCCA 59.997 52.381 0.00 0.00 0.00 4.37
286 287 0.478072 AGTGCCATTGTCAGTCCCAA 59.522 50.000 0.00 0.00 0.00 4.12
287 288 0.883833 GTGCCATTGTCAGTCCCAAG 59.116 55.000 0.00 0.00 0.00 3.61
288 289 0.895100 TGCCATTGTCAGTCCCAAGC 60.895 55.000 0.00 0.00 0.00 4.01
289 290 1.598701 GCCATTGTCAGTCCCAAGCC 61.599 60.000 0.00 0.00 0.00 4.35
290 291 0.251297 CCATTGTCAGTCCCAAGCCA 60.251 55.000 0.00 0.00 0.00 4.75
291 292 1.619654 CATTGTCAGTCCCAAGCCAA 58.380 50.000 0.00 0.00 0.00 4.52
292 293 1.270550 CATTGTCAGTCCCAAGCCAAC 59.729 52.381 0.00 0.00 0.00 3.77
293 294 0.257328 TTGTCAGTCCCAAGCCAACA 59.743 50.000 0.00 0.00 0.00 3.33
294 295 0.478072 TGTCAGTCCCAAGCCAACAT 59.522 50.000 0.00 0.00 0.00 2.71
295 296 1.133513 TGTCAGTCCCAAGCCAACATT 60.134 47.619 0.00 0.00 0.00 2.71
296 297 2.107378 TGTCAGTCCCAAGCCAACATTA 59.893 45.455 0.00 0.00 0.00 1.90
297 298 3.245229 TGTCAGTCCCAAGCCAACATTAT 60.245 43.478 0.00 0.00 0.00 1.28
298 299 3.129287 GTCAGTCCCAAGCCAACATTATG 59.871 47.826 0.00 0.00 0.00 1.90
299 300 2.428171 CAGTCCCAAGCCAACATTATGG 59.572 50.000 0.00 0.00 43.70 2.74
300 301 2.311542 AGTCCCAAGCCAACATTATGGA 59.688 45.455 0.00 0.00 43.54 3.41
301 302 3.052642 AGTCCCAAGCCAACATTATGGAT 60.053 43.478 0.00 0.00 43.54 3.41
303 304 4.892934 GTCCCAAGCCAACATTATGGATTA 59.107 41.667 0.00 0.00 46.84 1.75
304 305 5.362430 GTCCCAAGCCAACATTATGGATTAA 59.638 40.000 0.00 0.00 46.84 1.40
305 306 5.598005 TCCCAAGCCAACATTATGGATTAAG 59.402 40.000 0.00 0.00 46.84 1.85
306 307 5.291971 CCAAGCCAACATTATGGATTAAGC 58.708 41.667 0.00 0.00 46.84 3.09
307 308 5.163426 CCAAGCCAACATTATGGATTAAGCA 60.163 40.000 0.00 0.00 46.84 3.91
308 309 6.339730 CAAGCCAACATTATGGATTAAGCAA 58.660 36.000 0.00 0.00 46.84 3.91
309 310 6.736110 AGCCAACATTATGGATTAAGCAAT 57.264 33.333 0.00 0.00 43.54 3.56
310 311 6.518493 AGCCAACATTATGGATTAAGCAATG 58.482 36.000 0.00 0.00 43.54 2.82
311 312 5.178067 GCCAACATTATGGATTAAGCAATGC 59.822 40.000 0.00 0.00 43.54 3.56
312 313 5.697633 CCAACATTATGGATTAAGCAATGCC 59.302 40.000 0.00 0.00 43.54 4.40
313 314 6.282167 CAACATTATGGATTAAGCAATGCCA 58.718 36.000 0.00 0.00 31.81 4.92
314 315 5.846203 ACATTATGGATTAAGCAATGCCAC 58.154 37.500 0.00 0.00 31.81 5.01
315 316 5.599656 ACATTATGGATTAAGCAATGCCACT 59.400 36.000 0.00 0.00 31.81 4.00
316 317 5.772825 TTATGGATTAAGCAATGCCACTC 57.227 39.130 0.00 0.00 31.81 3.51
317 318 3.084536 TGGATTAAGCAATGCCACTCA 57.915 42.857 0.00 0.00 31.81 3.41
318 319 3.634504 TGGATTAAGCAATGCCACTCAT 58.365 40.909 0.00 0.00 36.87 2.90
319 320 4.790937 TGGATTAAGCAATGCCACTCATA 58.209 39.130 0.00 0.00 34.33 2.15
320 321 5.199723 TGGATTAAGCAATGCCACTCATAA 58.800 37.500 0.00 0.00 34.33 1.90
328 329 5.186409 AGCAATGCCACTCATAATTTCTTGT 59.814 36.000 0.00 0.00 34.33 3.16
330 331 5.587388 ATGCCACTCATAATTTCTTGTGG 57.413 39.130 12.87 12.87 45.33 4.17
337 338 4.406456 TCATAATTTCTTGTGGGTGCACT 58.594 39.130 17.98 0.00 0.00 4.40
355 359 9.435688 GGGTGCACTTTTTAATCATAAATTTCT 57.564 29.630 17.98 0.00 31.33 2.52
400 404 8.834004 AGTACTGATTAACCCATGTTACTCTA 57.166 34.615 0.00 0.00 37.46 2.43
401 405 8.915036 AGTACTGATTAACCCATGTTACTCTAG 58.085 37.037 0.00 0.00 37.46 2.43
402 406 7.125792 ACTGATTAACCCATGTTACTCTAGG 57.874 40.000 0.00 0.00 37.46 3.02
455 464 3.148084 CTGGACACCCCGTTCTGT 58.852 61.111 0.00 0.00 37.93 3.41
533 542 2.228914 GCCGGAGTATCGCGTTCAC 61.229 63.158 5.05 2.43 34.37 3.18
547 556 1.662876 CGTTCACGCCCTCAACAATTG 60.663 52.381 3.24 3.24 0.00 2.32
550 559 2.302260 TCACGCCCTCAACAATTGAAA 58.698 42.857 13.59 0.00 39.58 2.69
561 570 7.277098 CCCTCAACAATTGAAAATATTGCAGAG 59.723 37.037 13.59 0.00 39.58 3.35
851 863 1.592131 CTCTCTCTGCCATCGCTGC 60.592 63.158 0.00 0.00 35.36 5.25
867 879 1.537135 GCTGCTTAAGGCTCTCTACGG 60.537 57.143 4.29 0.00 42.39 4.02
878 893 3.009026 GCTCTCTACGGCCTATACCTAC 58.991 54.545 0.00 0.00 0.00 3.18
906 921 2.128035 CGTTGGTATTCTCTGATCCGC 58.872 52.381 0.00 0.00 0.00 5.54
937 952 1.285578 GCGGACTCTGCAGATTTCTC 58.714 55.000 18.63 9.32 0.00 2.87
942 957 3.307339 GGACTCTGCAGATTTCTCCAACT 60.307 47.826 18.63 0.00 0.00 3.16
943 958 3.932089 GACTCTGCAGATTTCTCCAACTC 59.068 47.826 18.63 0.00 0.00 3.01
945 960 2.639347 TCTGCAGATTTCTCCAACTCCA 59.361 45.455 13.74 0.00 0.00 3.86
946 961 3.072915 TCTGCAGATTTCTCCAACTCCAA 59.927 43.478 13.74 0.00 0.00 3.53
947 962 3.149196 TGCAGATTTCTCCAACTCCAAC 58.851 45.455 0.00 0.00 0.00 3.77
948 963 2.489722 GCAGATTTCTCCAACTCCAACC 59.510 50.000 0.00 0.00 0.00 3.77
949 964 2.744202 CAGATTTCTCCAACTCCAACCG 59.256 50.000 0.00 0.00 0.00 4.44
950 965 1.468914 GATTTCTCCAACTCCAACCGC 59.531 52.381 0.00 0.00 0.00 5.68
951 966 0.472471 TTTCTCCAACTCCAACCGCT 59.528 50.000 0.00 0.00 0.00 5.52
971 986 2.906691 TTTACGGTTCTTGGTTCCGA 57.093 45.000 9.75 0.00 46.05 4.55
981 996 2.045242 GGTTCCGAGAAAGGGGGC 60.045 66.667 0.00 0.00 0.00 5.80
982 997 2.436115 GTTCCGAGAAAGGGGGCG 60.436 66.667 0.00 0.00 0.00 6.13
983 998 3.712907 TTCCGAGAAAGGGGGCGG 61.713 66.667 0.00 0.00 44.83 6.13
1032 1047 4.678256 AGACCAAGGAGATGAAGTACAGA 58.322 43.478 0.00 0.00 0.00 3.41
1033 1048 5.087323 AGACCAAGGAGATGAAGTACAGAA 58.913 41.667 0.00 0.00 0.00 3.02
1457 1481 2.732658 GGATGGCTACGGGTACGG 59.267 66.667 0.00 0.00 46.48 4.02
1458 1482 2.028631 GATGGCTACGGGTACGGC 59.971 66.667 0.00 0.00 46.48 5.68
1459 1483 3.836176 GATGGCTACGGGTACGGCG 62.836 68.421 4.80 4.80 46.48 6.46
1548 1572 1.910722 GCAGGAGGAGAGCATTCCA 59.089 57.895 8.95 0.00 39.84 3.53
1668 1692 1.352156 CGCTGTACTCGCACCTTTCC 61.352 60.000 8.14 0.00 0.00 3.13
1686 1710 2.348472 TCCATGTCCAAGAGAAGGGTT 58.652 47.619 0.00 0.00 0.00 4.11
1707 1731 0.247736 AGTACTTCAGCAAGAGGGCG 59.752 55.000 0.00 0.00 39.27 6.13
1914 1944 4.688879 TCATCGTCATTCAGTGTACCAAAC 59.311 41.667 0.00 0.00 0.00 2.93
1929 1959 2.092968 ACCAAACAGTGTGAGAAGCTCA 60.093 45.455 0.00 0.00 38.25 4.26
2127 2157 2.234908 ACCTGTATCTGTCAGCAAGTCC 59.765 50.000 0.00 0.00 0.00 3.85
2183 2213 0.461693 GGAGATGCAGACAGTCAGGC 60.462 60.000 2.66 6.80 0.00 4.85
2235 2265 2.224793 ACAAGCCCCAGTTTTAGAGGAC 60.225 50.000 0.00 0.00 0.00 3.85
2421 2451 0.790814 GTGGAGAAACCGCGAAGAAG 59.209 55.000 8.23 0.00 42.61 2.85
2422 2452 0.320421 TGGAGAAACCGCGAAGAAGG 60.320 55.000 8.23 0.00 42.61 3.46
2588 2618 4.825546 AGAGCAAACAAGATGACAACAG 57.174 40.909 0.00 0.00 0.00 3.16
2601 2631 4.621068 TGACAACAGCTTTGAAGTTCAG 57.379 40.909 5.56 0.00 0.00 3.02
2602 2632 4.260985 TGACAACAGCTTTGAAGTTCAGA 58.739 39.130 5.56 0.30 0.00 3.27
2604 2634 4.265073 ACAACAGCTTTGAAGTTCAGAGT 58.735 39.130 20.94 8.42 31.85 3.24
2940 2970 1.948104 TGGACAGTGTCAAGGTTTCG 58.052 50.000 24.20 0.00 33.68 3.46
3034 3064 6.605594 TGGTTCATATTGGTAAGTCATTTCCC 59.394 38.462 0.00 0.00 0.00 3.97
3116 3146 6.680872 GCCTTAGTTCATCGTTTACTCTAGCT 60.681 42.308 0.00 0.00 0.00 3.32
3117 3147 6.693545 CCTTAGTTCATCGTTTACTCTAGCTG 59.306 42.308 0.00 0.00 0.00 4.24
3118 3148 5.646577 AGTTCATCGTTTACTCTAGCTGT 57.353 39.130 0.00 0.00 0.00 4.40
3119 3149 5.642686 AGTTCATCGTTTACTCTAGCTGTC 58.357 41.667 0.00 0.00 0.00 3.51
3266 3304 6.535274 ACTGAACCACTGTTATAAAACGAC 57.465 37.500 0.00 0.00 38.53 4.34
3292 3330 3.683847 GCCTGATTCCACTGCATAACTCT 60.684 47.826 0.00 0.00 0.00 3.24
3293 3331 4.521146 CCTGATTCCACTGCATAACTCTT 58.479 43.478 0.00 0.00 0.00 2.85
3294 3332 5.674525 CCTGATTCCACTGCATAACTCTTA 58.325 41.667 0.00 0.00 0.00 2.10
3330 3368 6.183360 CCTTCCATAAGCTAAAGAAAGAAGGC 60.183 42.308 11.47 0.00 40.84 4.35
3331 3369 6.067217 TCCATAAGCTAAAGAAAGAAGGCT 57.933 37.500 0.00 0.00 0.00 4.58
3333 3371 6.948309 TCCATAAGCTAAAGAAAGAAGGCTTT 59.052 34.615 0.00 0.00 46.62 3.51
3334 3372 7.031975 CCATAAGCTAAAGAAAGAAGGCTTTG 58.968 38.462 0.00 0.00 44.10 2.77
3335 3373 4.511617 AGCTAAAGAAAGAAGGCTTTGC 57.488 40.909 0.00 0.00 44.10 3.68
3387 3435 9.462174 CATCTTGAAATGATCACTAGACTAGTC 57.538 37.037 15.41 15.41 37.92 2.59
3495 3555 8.592105 TCAAAATCAGAATTCAATGTTTGTCC 57.408 30.769 8.44 0.00 0.00 4.02
3509 3569 2.178912 TTGTCCGCCTTTAACCAGAG 57.821 50.000 0.00 0.00 0.00 3.35
3523 3583 2.719739 ACCAGAGGCAACATTCTGATG 58.280 47.619 2.54 0.00 42.67 3.07
3794 3861 5.045578 AGCGGCATTATCCCTGTAAGATAAT 60.046 40.000 1.45 0.00 44.14 1.28
3814 3882 5.767277 AATTCTTTTCCATGGGATGCTTT 57.233 34.783 13.02 0.00 0.00 3.51
4047 4121 2.953466 ATGTGATTGATGCTGCAACC 57.047 45.000 6.36 2.14 0.00 3.77
4118 4192 3.372206 CCTTTACAGACTGCATTTCCTCG 59.628 47.826 1.25 0.00 0.00 4.63
4214 4300 3.988379 AACACTAGTGCAACATTGTGG 57.012 42.857 22.90 0.00 41.43 4.17
4227 4313 4.320608 ACATTGTGGCCAAGTAGTTTTG 57.679 40.909 7.24 0.00 33.17 2.44
4275 4361 5.660460 GGTAAAAATTCCCTGGCATTAGTG 58.340 41.667 0.00 0.00 0.00 2.74
4278 4364 7.286775 GGTAAAAATTCCCTGGCATTAGTGATA 59.713 37.037 0.00 0.00 0.00 2.15
4319 4405 7.161715 TCTAATGGCTTAATCAATTACCCCT 57.838 36.000 0.00 0.00 0.00 4.79
4339 4425 4.163078 CCCTCCTGTGATTCACTACTTGAT 59.837 45.833 17.26 0.00 35.11 2.57
4347 4433 9.987272 CTGTGATTCACTACTTGATATGGATTA 57.013 33.333 17.26 0.00 35.11 1.75
4379 4465 2.862780 AGGGGACTGCCTGTAAACA 58.137 52.632 0.00 0.00 41.13 2.83
4418 4504 3.701040 GTGTGGTCATGCCTTATTTCCAT 59.299 43.478 7.54 0.00 38.35 3.41
4462 4548 6.563422 TGTTCACTTTCTTCTTTGACCATTG 58.437 36.000 0.00 0.00 0.00 2.82
4478 4564 3.056607 ACCATTGCTTGCTGTGGTTATTC 60.057 43.478 13.69 0.00 42.03 1.75
4558 4644 2.423185 TGAACTTGTGCAAGGTTGTCAG 59.577 45.455 15.31 0.00 38.71 3.51
4572 4658 3.054878 GTTGTCAGTTTGGTCGTCGTAT 58.945 45.455 0.00 0.00 0.00 3.06
4593 4679 1.919918 GGAAACGTGCAAGCATTATGC 59.080 47.619 9.46 9.46 45.46 3.14
4793 4884 2.569354 TTTTGGCATGCACGTCCCC 61.569 57.895 21.36 0.00 0.00 4.81
4814 4905 4.339814 CCCGAAGAGATAAGTTAGCACTCT 59.660 45.833 0.28 6.16 39.21 3.24
4863 4956 0.618393 TTTCCTACCCCCACCCTACG 60.618 60.000 0.00 0.00 0.00 3.51
4867 4960 3.335410 TACCCCCACCCTACGCCAT 62.335 63.158 0.00 0.00 0.00 4.40
4925 5018 4.263683 ACTCTGCTATGGAAGAAAGCCTTT 60.264 41.667 0.00 0.00 34.68 3.11
4945 5038 6.037281 GCCTTTTAGACCATACTACTTCTTGC 59.963 42.308 0.00 0.00 0.00 4.01
4954 5047 3.622060 TACTTCTTGCGGCCTGGCC 62.622 63.158 28.17 28.17 46.75 5.36
5063 5252 4.202131 GGTATATTCGGGCAGAGGTATAGC 60.202 50.000 11.98 11.98 31.55 2.97
5135 5328 2.329267 TCTTGAAGCAGTTCTCCCTCA 58.671 47.619 0.00 0.00 33.38 3.86
5273 5508 2.291282 TGGTTTGGACACCTGTCTTGTT 60.291 45.455 5.44 0.00 44.20 2.83
5276 5511 0.105964 TGGACACCTGTCTTGTTCCG 59.894 55.000 5.44 0.00 44.20 4.30
5286 5521 1.993370 GTCTTGTTCCGGAGAATCACG 59.007 52.381 3.34 1.52 36.25 4.35
5289 5524 3.056107 TCTTGTTCCGGAGAATCACGATT 60.056 43.478 3.34 0.00 36.25 3.34
5290 5525 4.158949 TCTTGTTCCGGAGAATCACGATTA 59.841 41.667 3.34 0.00 36.25 1.75
5291 5526 3.777478 TGTTCCGGAGAATCACGATTAC 58.223 45.455 3.34 0.00 36.25 1.89
5306 5541 6.920817 TCACGATTACTATCTGTCAGTTTGT 58.079 36.000 0.00 1.72 0.00 2.83
5360 5606 4.691860 ACATATTGCTGCAACTCTGTTC 57.308 40.909 18.51 0.00 0.00 3.18
5482 5740 3.192001 AGCTGCATGTTTGAATCGATTGT 59.808 39.130 16.96 0.00 0.00 2.71
5498 5756 6.349973 TCGATTGTGTCAGCATATCTTTTC 57.650 37.500 0.00 0.00 0.00 2.29
5563 5821 5.781210 TCTTGCTATACAGTCAGAGATGG 57.219 43.478 0.00 0.00 0.00 3.51
5564 5822 5.449553 TCTTGCTATACAGTCAGAGATGGA 58.550 41.667 0.00 0.00 0.00 3.41
5565 5823 6.073981 TCTTGCTATACAGTCAGAGATGGAT 58.926 40.000 0.00 0.00 0.00 3.41
5566 5824 5.718724 TGCTATACAGTCAGAGATGGATG 57.281 43.478 0.00 0.00 0.00 3.51
5567 5825 5.388654 TGCTATACAGTCAGAGATGGATGA 58.611 41.667 0.00 0.00 0.00 2.92
5569 5827 6.152492 TGCTATACAGTCAGAGATGGATGATC 59.848 42.308 0.00 0.00 0.00 2.92
5570 5828 6.152492 GCTATACAGTCAGAGATGGATGATCA 59.848 42.308 0.00 0.00 32.86 2.92
5571 5829 4.940905 ACAGTCAGAGATGGATGATCAG 57.059 45.455 0.09 0.00 32.86 2.90
5572 5830 4.288398 ACAGTCAGAGATGGATGATCAGT 58.712 43.478 0.09 0.00 32.86 3.41
5573 5831 4.341806 ACAGTCAGAGATGGATGATCAGTC 59.658 45.833 0.09 0.00 32.86 3.51
5606 5865 1.220749 CTTGCTTACCGGGCTGCTA 59.779 57.895 6.32 2.52 0.00 3.49
5615 5874 2.089201 ACCGGGCTGCTAACATTTTAC 58.911 47.619 6.32 0.00 0.00 2.01
5646 5905 5.049749 GCGCTTTTCTTCTTCTTCTTCTTCT 60.050 40.000 0.00 0.00 0.00 2.85
5647 5906 6.512578 GCGCTTTTCTTCTTCTTCTTCTTCTT 60.513 38.462 0.00 0.00 0.00 2.52
5648 5907 7.068955 CGCTTTTCTTCTTCTTCTTCTTCTTC 58.931 38.462 0.00 0.00 0.00 2.87
5649 5908 7.042119 CGCTTTTCTTCTTCTTCTTCTTCTTCT 60.042 37.037 0.00 0.00 0.00 2.85
5650 5909 8.620416 GCTTTTCTTCTTCTTCTTCTTCTTCTT 58.380 33.333 0.00 0.00 0.00 2.52
5651 5910 9.934190 CTTTTCTTCTTCTTCTTCTTCTTCTTG 57.066 33.333 0.00 0.00 0.00 3.02
5652 5911 9.454859 TTTTCTTCTTCTTCTTCTTCTTCTTGT 57.545 29.630 0.00 0.00 0.00 3.16
5653 5912 9.454859 TTTCTTCTTCTTCTTCTTCTTCTTGTT 57.545 29.630 0.00 0.00 0.00 2.83
5654 5913 8.655651 TCTTCTTCTTCTTCTTCTTCTTGTTC 57.344 34.615 0.00 0.00 0.00 3.18
5655 5914 8.482128 TCTTCTTCTTCTTCTTCTTCTTGTTCT 58.518 33.333 0.00 0.00 0.00 3.01
5656 5915 9.108284 CTTCTTCTTCTTCTTCTTCTTGTTCTT 57.892 33.333 0.00 0.00 0.00 2.52
5657 5916 9.454859 TTCTTCTTCTTCTTCTTCTTGTTCTTT 57.545 29.630 0.00 0.00 0.00 2.52
5686 5945 7.384387 GGATACTAATGTTTATTCACCGGAGAC 59.616 40.741 9.46 0.00 0.00 3.36
5703 5962 1.454276 AGACGAAACACAACGTATGCG 59.546 47.619 0.19 0.19 42.74 4.73
5719 5978 5.718246 CGTATGCGTTCAAAAGTGATCTAG 58.282 41.667 0.00 0.00 32.48 2.43
5720 5979 5.515270 CGTATGCGTTCAAAAGTGATCTAGA 59.485 40.000 0.00 0.00 32.48 2.43
5721 5980 6.199154 CGTATGCGTTCAAAAGTGATCTAGAT 59.801 38.462 4.47 4.47 32.48 1.98
5722 5981 5.784750 TGCGTTCAAAAGTGATCTAGATG 57.215 39.130 10.74 0.00 32.48 2.90
5723 5982 4.093408 TGCGTTCAAAAGTGATCTAGATGC 59.907 41.667 10.74 3.20 32.48 3.91
5724 5983 4.093408 GCGTTCAAAAGTGATCTAGATGCA 59.907 41.667 10.74 5.42 32.48 3.96
5725 5984 5.554636 CGTTCAAAAGTGATCTAGATGCAC 58.445 41.667 10.74 16.51 32.48 4.57
5726 5985 5.349817 CGTTCAAAAGTGATCTAGATGCACT 59.650 40.000 22.02 22.02 44.15 4.40
5747 6006 8.956426 TGCACTTATATTTCTTTTTACAGAGGG 58.044 33.333 0.00 0.00 0.00 4.30
5767 6026 4.124970 GGGAGTAAGTTCGAACAACACTT 58.875 43.478 28.78 16.60 35.00 3.16
5771 6030 5.172934 AGTAAGTTCGAACAACACTTCACA 58.827 37.500 28.78 0.00 32.88 3.58
5776 6035 3.857052 TCGAACAACACTTCACAGACTT 58.143 40.909 0.00 0.00 0.00 3.01
5777 6036 5.001237 TCGAACAACACTTCACAGACTTA 57.999 39.130 0.00 0.00 0.00 2.24
5778 6037 5.597806 TCGAACAACACTTCACAGACTTAT 58.402 37.500 0.00 0.00 0.00 1.73
5793 6052 5.170021 CAGACTTATGCTCCAGCTGATATC 58.830 45.833 17.39 1.68 42.66 1.63
5801 6060 3.443681 GCTCCAGCTGATATCTAGGACTC 59.556 52.174 17.39 0.00 38.21 3.36
5802 6061 4.661222 CTCCAGCTGATATCTAGGACTCA 58.339 47.826 17.39 0.00 0.00 3.41
5805 6064 4.218200 CCAGCTGATATCTAGGACTCAGTG 59.782 50.000 17.39 11.42 37.90 3.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.853555 TCAAATTTCGTTGAAATGCAATATACT 57.146 25.926 5.61 0.00 40.77 2.12
3 4 9.421806 TCTTCAAATTTCGTTGAAATGCAATAT 57.578 25.926 5.61 0.00 44.66 1.28
4 5 8.698854 GTCTTCAAATTTCGTTGAAATGCAATA 58.301 29.630 5.61 0.00 44.66 1.90
5 6 7.224362 TGTCTTCAAATTTCGTTGAAATGCAAT 59.776 29.630 5.61 0.00 44.66 3.56
6 7 6.533012 TGTCTTCAAATTTCGTTGAAATGCAA 59.467 30.769 5.61 0.00 44.66 4.08
7 8 6.038985 TGTCTTCAAATTTCGTTGAAATGCA 58.961 32.000 5.61 0.00 44.66 3.96
8 9 6.509317 TGTCTTCAAATTTCGTTGAAATGC 57.491 33.333 5.61 0.00 44.66 3.56
22 23 7.079451 AGAGACTCCCTAATTTGTCTTCAAA 57.921 36.000 0.00 0.00 45.71 2.69
23 24 6.688073 AGAGACTCCCTAATTTGTCTTCAA 57.312 37.500 0.00 0.00 39.53 2.69
24 25 6.688073 AAGAGACTCCCTAATTTGTCTTCA 57.312 37.500 0.00 0.00 39.53 3.02
25 26 7.162082 TGAAAGAGACTCCCTAATTTGTCTTC 58.838 38.462 0.00 0.00 39.53 2.87
26 27 7.079451 TGAAAGAGACTCCCTAATTTGTCTT 57.921 36.000 0.00 0.00 39.53 3.01
27 28 6.271159 ACTGAAAGAGACTCCCTAATTTGTCT 59.729 38.462 0.00 0.00 41.76 3.41
28 29 6.468543 ACTGAAAGAGACTCCCTAATTTGTC 58.531 40.000 0.00 0.00 37.43 3.18
29 30 6.441088 ACTGAAAGAGACTCCCTAATTTGT 57.559 37.500 0.00 0.00 37.43 2.83
30 31 5.578727 CGACTGAAAGAGACTCCCTAATTTG 59.421 44.000 0.00 0.00 37.43 2.32
31 32 5.480772 TCGACTGAAAGAGACTCCCTAATTT 59.519 40.000 0.00 0.00 37.43 1.82
32 33 5.017490 TCGACTGAAAGAGACTCCCTAATT 58.983 41.667 0.00 0.00 37.43 1.40
33 34 4.601084 TCGACTGAAAGAGACTCCCTAAT 58.399 43.478 0.00 0.00 37.43 1.73
34 35 4.030314 TCGACTGAAAGAGACTCCCTAA 57.970 45.455 0.00 0.00 37.43 2.69
35 36 3.715638 TCGACTGAAAGAGACTCCCTA 57.284 47.619 0.00 0.00 37.43 3.53
36 37 2.588464 TCGACTGAAAGAGACTCCCT 57.412 50.000 0.00 0.00 37.43 4.20
37 38 3.662247 TTTCGACTGAAAGAGACTCCC 57.338 47.619 0.00 0.00 39.13 4.30
38 39 7.221838 CAGATATTTTCGACTGAAAGAGACTCC 59.778 40.741 0.00 0.00 44.46 3.85
39 40 7.757624 ACAGATATTTTCGACTGAAAGAGACTC 59.242 37.037 5.56 0.00 44.46 3.36
40 41 7.543868 CACAGATATTTTCGACTGAAAGAGACT 59.456 37.037 5.56 0.00 44.46 3.24
41 42 7.201478 CCACAGATATTTTCGACTGAAAGAGAC 60.201 40.741 5.56 0.00 44.46 3.36
42 43 6.813649 CCACAGATATTTTCGACTGAAAGAGA 59.186 38.462 5.56 0.00 44.46 3.10
43 44 6.591834 ACCACAGATATTTTCGACTGAAAGAG 59.408 38.462 5.56 0.00 44.46 2.85
44 45 6.368791 CACCACAGATATTTTCGACTGAAAGA 59.631 38.462 5.56 0.00 44.46 2.52
45 46 6.402550 CCACCACAGATATTTTCGACTGAAAG 60.403 42.308 5.56 0.00 44.46 2.62
46 47 5.411361 CCACCACAGATATTTTCGACTGAAA 59.589 40.000 5.56 0.00 42.21 2.69
47 48 4.935205 CCACCACAGATATTTTCGACTGAA 59.065 41.667 5.56 0.00 34.88 3.02
48 49 4.221924 TCCACCACAGATATTTTCGACTGA 59.778 41.667 5.56 0.00 34.88 3.41
49 50 4.503910 TCCACCACAGATATTTTCGACTG 58.496 43.478 0.00 0.00 36.58 3.51
50 51 4.819105 TCCACCACAGATATTTTCGACT 57.181 40.909 0.00 0.00 0.00 4.18
51 52 4.260784 GCATCCACCACAGATATTTTCGAC 60.261 45.833 0.00 0.00 0.00 4.20
52 53 3.876914 GCATCCACCACAGATATTTTCGA 59.123 43.478 0.00 0.00 0.00 3.71
53 54 3.303329 CGCATCCACCACAGATATTTTCG 60.303 47.826 0.00 0.00 0.00 3.46
54 55 3.876914 TCGCATCCACCACAGATATTTTC 59.123 43.478 0.00 0.00 0.00 2.29
55 56 3.879295 CTCGCATCCACCACAGATATTTT 59.121 43.478 0.00 0.00 0.00 1.82
56 57 3.118261 ACTCGCATCCACCACAGATATTT 60.118 43.478 0.00 0.00 0.00 1.40
57 58 2.435805 ACTCGCATCCACCACAGATATT 59.564 45.455 0.00 0.00 0.00 1.28
58 59 2.042464 ACTCGCATCCACCACAGATAT 58.958 47.619 0.00 0.00 0.00 1.63
59 60 1.485124 ACTCGCATCCACCACAGATA 58.515 50.000 0.00 0.00 0.00 1.98
60 61 0.615331 AACTCGCATCCACCACAGAT 59.385 50.000 0.00 0.00 0.00 2.90
61 62 0.396435 AAACTCGCATCCACCACAGA 59.604 50.000 0.00 0.00 0.00 3.41
62 63 1.238439 AAAACTCGCATCCACCACAG 58.762 50.000 0.00 0.00 0.00 3.66
63 64 1.336440 CAAAAACTCGCATCCACCACA 59.664 47.619 0.00 0.00 0.00 4.17
64 65 1.336755 ACAAAAACTCGCATCCACCAC 59.663 47.619 0.00 0.00 0.00 4.16
65 66 1.606668 GACAAAAACTCGCATCCACCA 59.393 47.619 0.00 0.00 0.00 4.17
66 67 1.399727 CGACAAAAACTCGCATCCACC 60.400 52.381 0.00 0.00 0.00 4.61
67 68 1.399727 CCGACAAAAACTCGCATCCAC 60.400 52.381 0.00 0.00 0.00 4.02
68 69 0.871722 CCGACAAAAACTCGCATCCA 59.128 50.000 0.00 0.00 0.00 3.41
69 70 0.168128 CCCGACAAAAACTCGCATCC 59.832 55.000 0.00 0.00 0.00 3.51
70 71 1.153353 TCCCGACAAAAACTCGCATC 58.847 50.000 0.00 0.00 0.00 3.91
71 72 1.535462 CTTCCCGACAAAAACTCGCAT 59.465 47.619 0.00 0.00 0.00 4.73
72 73 0.941542 CTTCCCGACAAAAACTCGCA 59.058 50.000 0.00 0.00 0.00 5.10
73 74 1.070108 GTCTTCCCGACAAAAACTCGC 60.070 52.381 0.00 0.00 42.37 5.03
74 75 2.475487 GAGTCTTCCCGACAAAAACTCG 59.525 50.000 0.00 0.00 45.32 4.18
75 76 3.495001 CAGAGTCTTCCCGACAAAAACTC 59.505 47.826 0.00 0.00 45.32 3.01
76 77 3.467803 CAGAGTCTTCCCGACAAAAACT 58.532 45.455 0.00 0.00 45.32 2.66
77 78 2.031944 GCAGAGTCTTCCCGACAAAAAC 60.032 50.000 0.00 0.00 45.32 2.43
78 79 2.218603 GCAGAGTCTTCCCGACAAAAA 58.781 47.619 0.00 0.00 45.32 1.94
79 80 1.140052 TGCAGAGTCTTCCCGACAAAA 59.860 47.619 0.00 0.00 45.32 2.44
80 81 0.756294 TGCAGAGTCTTCCCGACAAA 59.244 50.000 0.00 0.00 45.32 2.83
81 82 0.756294 TTGCAGAGTCTTCCCGACAA 59.244 50.000 0.00 0.00 45.32 3.18
82 83 0.756294 TTTGCAGAGTCTTCCCGACA 59.244 50.000 0.00 0.00 45.32 4.35
83 84 2.100605 ATTTGCAGAGTCTTCCCGAC 57.899 50.000 0.00 0.00 43.17 4.79
84 85 3.096852 TCTATTTGCAGAGTCTTCCCGA 58.903 45.455 0.00 0.00 0.00 5.14
85 86 3.526931 TCTATTTGCAGAGTCTTCCCG 57.473 47.619 0.00 0.00 0.00 5.14
86 87 5.431765 TGATTCTATTTGCAGAGTCTTCCC 58.568 41.667 0.00 0.00 33.64 3.97
87 88 6.820656 TCTTGATTCTATTTGCAGAGTCTTCC 59.179 38.462 0.00 0.00 33.64 3.46
88 89 7.840342 TCTTGATTCTATTTGCAGAGTCTTC 57.160 36.000 0.00 0.00 33.64 2.87
89 90 8.627208 TTTCTTGATTCTATTTGCAGAGTCTT 57.373 30.769 0.00 0.00 33.64 3.01
90 91 8.510505 GTTTTCTTGATTCTATTTGCAGAGTCT 58.489 33.333 0.00 0.00 33.64 3.24
91 92 7.479916 CGTTTTCTTGATTCTATTTGCAGAGTC 59.520 37.037 0.00 0.00 33.22 3.36
92 93 7.301054 CGTTTTCTTGATTCTATTTGCAGAGT 58.699 34.615 0.00 0.00 0.00 3.24
93 94 6.744537 CCGTTTTCTTGATTCTATTTGCAGAG 59.255 38.462 0.00 0.00 0.00 3.35
94 95 6.429692 TCCGTTTTCTTGATTCTATTTGCAGA 59.570 34.615 0.00 0.00 0.00 4.26
95 96 6.611381 TCCGTTTTCTTGATTCTATTTGCAG 58.389 36.000 0.00 0.00 0.00 4.41
96 97 6.349280 CCTCCGTTTTCTTGATTCTATTTGCA 60.349 38.462 0.00 0.00 0.00 4.08
97 98 6.030228 CCTCCGTTTTCTTGATTCTATTTGC 58.970 40.000 0.00 0.00 0.00 3.68
98 99 7.023575 CACCTCCGTTTTCTTGATTCTATTTG 58.976 38.462 0.00 0.00 0.00 2.32
99 100 6.349363 GCACCTCCGTTTTCTTGATTCTATTT 60.349 38.462 0.00 0.00 0.00 1.40
100 101 5.123979 GCACCTCCGTTTTCTTGATTCTATT 59.876 40.000 0.00 0.00 0.00 1.73
101 102 4.636206 GCACCTCCGTTTTCTTGATTCTAT 59.364 41.667 0.00 0.00 0.00 1.98
102 103 4.000988 GCACCTCCGTTTTCTTGATTCTA 58.999 43.478 0.00 0.00 0.00 2.10
103 104 2.814336 GCACCTCCGTTTTCTTGATTCT 59.186 45.455 0.00 0.00 0.00 2.40
104 105 2.552315 TGCACCTCCGTTTTCTTGATTC 59.448 45.455 0.00 0.00 0.00 2.52
105 106 2.582052 TGCACCTCCGTTTTCTTGATT 58.418 42.857 0.00 0.00 0.00 2.57
106 107 2.270352 TGCACCTCCGTTTTCTTGAT 57.730 45.000 0.00 0.00 0.00 2.57
107 108 1.879380 CATGCACCTCCGTTTTCTTGA 59.121 47.619 0.00 0.00 0.00 3.02
108 109 1.879380 TCATGCACCTCCGTTTTCTTG 59.121 47.619 0.00 0.00 0.00 3.02
109 110 2.270352 TCATGCACCTCCGTTTTCTT 57.730 45.000 0.00 0.00 0.00 2.52
110 111 2.496899 ATCATGCACCTCCGTTTTCT 57.503 45.000 0.00 0.00 0.00 2.52
111 112 4.695217 TTAATCATGCACCTCCGTTTTC 57.305 40.909 0.00 0.00 0.00 2.29
112 113 5.659440 AATTAATCATGCACCTCCGTTTT 57.341 34.783 0.00 0.00 0.00 2.43
113 114 6.767524 TTAATTAATCATGCACCTCCGTTT 57.232 33.333 0.00 0.00 0.00 3.60
114 115 6.959639 ATTAATTAATCATGCACCTCCGTT 57.040 33.333 4.81 0.00 0.00 4.44
115 116 6.239008 CCAATTAATTAATCATGCACCTCCGT 60.239 38.462 11.08 0.00 0.00 4.69
116 117 6.151691 CCAATTAATTAATCATGCACCTCCG 58.848 40.000 11.08 0.00 0.00 4.63
117 118 6.458210 CCCAATTAATTAATCATGCACCTCC 58.542 40.000 11.08 0.00 0.00 4.30
118 119 5.928264 GCCCAATTAATTAATCATGCACCTC 59.072 40.000 11.08 0.00 0.00 3.85
119 120 5.366186 TGCCCAATTAATTAATCATGCACCT 59.634 36.000 17.55 0.00 0.00 4.00
120 121 5.609423 TGCCCAATTAATTAATCATGCACC 58.391 37.500 17.55 5.64 0.00 5.01
121 122 7.733402 AATGCCCAATTAATTAATCATGCAC 57.267 32.000 21.11 9.98 30.47 4.57
122 123 8.749026 AAAATGCCCAATTAATTAATCATGCA 57.251 26.923 21.02 21.02 31.47 3.96
145 146 6.014327 ACGGATGTAGTAGTACCCAAGAAAAA 60.014 38.462 5.26 0.00 0.00 1.94
146 147 5.481473 ACGGATGTAGTAGTACCCAAGAAAA 59.519 40.000 5.26 0.00 0.00 2.29
147 148 5.018809 ACGGATGTAGTAGTACCCAAGAAA 58.981 41.667 5.26 0.00 0.00 2.52
148 149 4.603131 ACGGATGTAGTAGTACCCAAGAA 58.397 43.478 5.26 0.00 0.00 2.52
149 150 4.080129 AGACGGATGTAGTAGTACCCAAGA 60.080 45.833 5.26 0.00 0.00 3.02
150 151 4.205587 AGACGGATGTAGTAGTACCCAAG 58.794 47.826 5.26 0.00 0.00 3.61
151 152 4.240881 AGACGGATGTAGTAGTACCCAA 57.759 45.455 5.26 0.00 0.00 4.12
152 153 3.939740 AGACGGATGTAGTAGTACCCA 57.060 47.619 5.26 0.00 0.00 4.51
153 154 4.400567 ACAAAGACGGATGTAGTAGTACCC 59.599 45.833 5.26 0.00 0.00 3.69
154 155 5.573337 ACAAAGACGGATGTAGTAGTACC 57.427 43.478 5.26 0.00 0.00 3.34
155 156 9.578439 AATAAACAAAGACGGATGTAGTAGTAC 57.422 33.333 0.37 0.37 0.00 2.73
156 157 9.577110 CAATAAACAAAGACGGATGTAGTAGTA 57.423 33.333 0.00 0.00 0.00 1.82
157 158 7.548075 CCAATAAACAAAGACGGATGTAGTAGT 59.452 37.037 0.00 0.00 0.00 2.73
158 159 7.548075 ACCAATAAACAAAGACGGATGTAGTAG 59.452 37.037 0.00 0.00 0.00 2.57
159 160 7.388437 ACCAATAAACAAAGACGGATGTAGTA 58.612 34.615 0.00 0.00 0.00 1.82
160 161 6.235664 ACCAATAAACAAAGACGGATGTAGT 58.764 36.000 0.00 0.00 0.00 2.73
161 162 6.183360 GGACCAATAAACAAAGACGGATGTAG 60.183 42.308 0.00 0.00 0.00 2.74
162 163 5.644636 GGACCAATAAACAAAGACGGATGTA 59.355 40.000 0.00 0.00 0.00 2.29
163 164 4.457949 GGACCAATAAACAAAGACGGATGT 59.542 41.667 0.00 0.00 0.00 3.06
164 165 4.700213 AGGACCAATAAACAAAGACGGATG 59.300 41.667 0.00 0.00 0.00 3.51
165 166 4.918588 AGGACCAATAAACAAAGACGGAT 58.081 39.130 0.00 0.00 0.00 4.18
166 167 4.041198 AGAGGACCAATAAACAAAGACGGA 59.959 41.667 0.00 0.00 0.00 4.69
167 168 4.324267 AGAGGACCAATAAACAAAGACGG 58.676 43.478 0.00 0.00 0.00 4.79
168 169 5.389516 CGAAGAGGACCAATAAACAAAGACG 60.390 44.000 0.00 0.00 0.00 4.18
169 170 5.469084 ACGAAGAGGACCAATAAACAAAGAC 59.531 40.000 0.00 0.00 0.00 3.01
170 171 5.617252 ACGAAGAGGACCAATAAACAAAGA 58.383 37.500 0.00 0.00 0.00 2.52
171 172 5.941948 ACGAAGAGGACCAATAAACAAAG 57.058 39.130 0.00 0.00 0.00 2.77
172 173 6.702716 AAACGAAGAGGACCAATAAACAAA 57.297 33.333 0.00 0.00 0.00 2.83
173 174 6.702716 AAAACGAAGAGGACCAATAAACAA 57.297 33.333 0.00 0.00 0.00 2.83
174 175 6.095720 ACAAAAACGAAGAGGACCAATAAACA 59.904 34.615 0.00 0.00 0.00 2.83
175 176 6.416750 CACAAAAACGAAGAGGACCAATAAAC 59.583 38.462 0.00 0.00 0.00 2.01
176 177 6.095720 ACACAAAAACGAAGAGGACCAATAAA 59.904 34.615 0.00 0.00 0.00 1.40
177 178 5.591067 ACACAAAAACGAAGAGGACCAATAA 59.409 36.000 0.00 0.00 0.00 1.40
178 179 5.127491 ACACAAAAACGAAGAGGACCAATA 58.873 37.500 0.00 0.00 0.00 1.90
179 180 3.951680 ACACAAAAACGAAGAGGACCAAT 59.048 39.130 0.00 0.00 0.00 3.16
180 181 3.349022 ACACAAAAACGAAGAGGACCAA 58.651 40.909 0.00 0.00 0.00 3.67
181 182 2.940410 GACACAAAAACGAAGAGGACCA 59.060 45.455 0.00 0.00 0.00 4.02
182 183 2.940410 TGACACAAAAACGAAGAGGACC 59.060 45.455 0.00 0.00 0.00 4.46
183 184 4.609691 TTGACACAAAAACGAAGAGGAC 57.390 40.909 0.00 0.00 0.00 3.85
184 185 5.630661 TTTTGACACAAAAACGAAGAGGA 57.369 34.783 7.11 0.00 0.00 3.71
185 186 6.885735 AATTTTGACACAAAAACGAAGAGG 57.114 33.333 12.43 0.00 32.12 3.69
186 187 7.948137 TCAAATTTTGACACAAAAACGAAGAG 58.052 30.769 7.74 2.09 34.08 2.85
187 188 7.875316 TCAAATTTTGACACAAAAACGAAGA 57.125 28.000 7.74 5.70 34.08 2.87
188 189 8.379161 TGATCAAATTTTGACACAAAAACGAAG 58.621 29.630 13.80 3.94 43.48 3.79
189 190 8.244494 TGATCAAATTTTGACACAAAAACGAA 57.756 26.923 13.80 2.34 43.48 3.85
190 191 7.818493 TGATCAAATTTTGACACAAAAACGA 57.182 28.000 13.80 9.85 43.48 3.85
191 192 9.782028 CTATGATCAAATTTTGACACAAAAACG 57.218 29.630 13.80 5.82 43.48 3.60
222 223 9.107177 TCAACATGCATTAAAATTTTGTCAGTT 57.893 25.926 13.76 6.42 0.00 3.16
223 224 8.659925 TCAACATGCATTAAAATTTTGTCAGT 57.340 26.923 13.76 0.92 0.00 3.41
224 225 9.749490 GATCAACATGCATTAAAATTTTGTCAG 57.251 29.630 13.76 2.47 0.00 3.51
225 226 8.433893 CGATCAACATGCATTAAAATTTTGTCA 58.566 29.630 13.76 6.26 0.00 3.58
226 227 8.646356 TCGATCAACATGCATTAAAATTTTGTC 58.354 29.630 13.76 0.98 0.00 3.18
227 228 8.531622 TCGATCAACATGCATTAAAATTTTGT 57.468 26.923 13.76 0.00 0.00 2.83
228 229 9.808808 TTTCGATCAACATGCATTAAAATTTTG 57.191 25.926 13.76 0.00 0.00 2.44
235 236 9.421806 AGAAAATTTTCGATCAACATGCATTAA 57.578 25.926 21.98 0.00 41.92 1.40
236 237 8.984891 AGAAAATTTTCGATCAACATGCATTA 57.015 26.923 21.98 0.00 41.92 1.90
237 238 7.894376 AGAAAATTTTCGATCAACATGCATT 57.106 28.000 21.98 0.35 41.92 3.56
238 239 7.148540 CCAAGAAAATTTTCGATCAACATGCAT 60.149 33.333 21.98 0.00 41.92 3.96
239 240 6.145858 CCAAGAAAATTTTCGATCAACATGCA 59.854 34.615 21.98 0.00 41.92 3.96
240 241 6.401367 CCCAAGAAAATTTTCGATCAACATGC 60.401 38.462 21.98 0.00 41.92 4.06
241 242 6.646240 ACCCAAGAAAATTTTCGATCAACATG 59.354 34.615 21.98 12.73 41.92 3.21
242 243 6.758254 ACCCAAGAAAATTTTCGATCAACAT 58.242 32.000 21.98 2.74 41.92 2.71
243 244 6.155475 ACCCAAGAAAATTTTCGATCAACA 57.845 33.333 21.98 0.00 41.92 3.33
244 245 7.326063 CACTACCCAAGAAAATTTTCGATCAAC 59.674 37.037 21.98 0.90 41.92 3.18
245 246 7.367285 CACTACCCAAGAAAATTTTCGATCAA 58.633 34.615 21.98 9.18 41.92 2.57
246 247 6.569610 GCACTACCCAAGAAAATTTTCGATCA 60.570 38.462 21.98 8.45 41.92 2.92
247 248 5.800438 GCACTACCCAAGAAAATTTTCGATC 59.200 40.000 21.98 2.63 41.92 3.69
248 249 5.336451 GGCACTACCCAAGAAAATTTTCGAT 60.336 40.000 21.98 14.02 41.92 3.59
249 250 4.022676 GGCACTACCCAAGAAAATTTTCGA 60.023 41.667 21.98 6.82 41.92 3.71
250 251 4.234574 GGCACTACCCAAGAAAATTTTCG 58.765 43.478 21.98 12.25 41.92 3.46
251 252 5.208463 TGGCACTACCCAAGAAAATTTTC 57.792 39.130 21.00 21.00 37.83 2.29
252 253 5.823861 ATGGCACTACCCAAGAAAATTTT 57.176 34.783 2.28 2.28 38.61 1.82
253 254 5.071653 ACAATGGCACTACCCAAGAAAATTT 59.928 36.000 0.00 0.00 38.61 1.82
254 255 4.592778 ACAATGGCACTACCCAAGAAAATT 59.407 37.500 0.00 0.00 38.61 1.82
255 256 4.159557 ACAATGGCACTACCCAAGAAAAT 58.840 39.130 0.00 0.00 38.61 1.82
256 257 3.571590 ACAATGGCACTACCCAAGAAAA 58.428 40.909 0.00 0.00 38.61 2.29
257 258 3.153919 GACAATGGCACTACCCAAGAAA 58.846 45.455 0.00 0.00 38.61 2.52
258 259 2.107378 TGACAATGGCACTACCCAAGAA 59.893 45.455 0.00 0.00 38.61 2.52
259 260 1.702401 TGACAATGGCACTACCCAAGA 59.298 47.619 0.00 0.00 38.61 3.02
260 261 2.086869 CTGACAATGGCACTACCCAAG 58.913 52.381 0.00 0.00 38.61 3.61
261 262 1.423541 ACTGACAATGGCACTACCCAA 59.576 47.619 0.00 0.00 38.61 4.12
262 263 1.003118 GACTGACAATGGCACTACCCA 59.997 52.381 0.00 0.00 39.65 4.51
263 264 1.679032 GGACTGACAATGGCACTACCC 60.679 57.143 0.00 0.00 37.83 3.69
264 265 1.679032 GGGACTGACAATGGCACTACC 60.679 57.143 0.00 0.00 39.84 3.18
265 266 1.003118 TGGGACTGACAATGGCACTAC 59.997 52.381 0.00 0.00 0.00 2.73
266 267 1.357137 TGGGACTGACAATGGCACTA 58.643 50.000 0.00 0.00 0.00 2.74
267 268 0.478072 TTGGGACTGACAATGGCACT 59.522 50.000 0.00 0.00 0.00 4.40
268 269 0.883833 CTTGGGACTGACAATGGCAC 59.116 55.000 0.00 0.00 0.00 5.01
269 270 0.895100 GCTTGGGACTGACAATGGCA 60.895 55.000 0.00 0.00 0.00 4.92
270 271 1.598701 GGCTTGGGACTGACAATGGC 61.599 60.000 0.00 0.00 0.00 4.40
271 272 0.251297 TGGCTTGGGACTGACAATGG 60.251 55.000 0.00 0.00 0.00 3.16
272 273 1.270550 GTTGGCTTGGGACTGACAATG 59.729 52.381 0.00 0.00 33.89 2.82
273 274 1.133513 TGTTGGCTTGGGACTGACAAT 60.134 47.619 0.00 0.00 33.89 2.71
274 275 0.257328 TGTTGGCTTGGGACTGACAA 59.743 50.000 0.00 0.00 0.00 3.18
275 276 0.478072 ATGTTGGCTTGGGACTGACA 59.522 50.000 0.00 0.00 0.00 3.58
276 277 1.620822 AATGTTGGCTTGGGACTGAC 58.379 50.000 0.00 0.00 0.00 3.51
277 278 3.355378 CATAATGTTGGCTTGGGACTGA 58.645 45.455 0.00 0.00 0.00 3.41
278 279 2.428171 CCATAATGTTGGCTTGGGACTG 59.572 50.000 0.00 0.00 0.00 3.51
279 280 2.311542 TCCATAATGTTGGCTTGGGACT 59.688 45.455 0.00 0.00 36.66 3.85
280 281 2.733956 TCCATAATGTTGGCTTGGGAC 58.266 47.619 0.00 0.00 36.66 4.46
281 282 3.686227 ATCCATAATGTTGGCTTGGGA 57.314 42.857 0.00 0.00 36.66 4.37
282 283 5.739935 GCTTAATCCATAATGTTGGCTTGGG 60.740 44.000 0.00 0.00 36.66 4.12
283 284 5.163426 TGCTTAATCCATAATGTTGGCTTGG 60.163 40.000 0.00 0.00 36.66 3.61
284 285 5.904941 TGCTTAATCCATAATGTTGGCTTG 58.095 37.500 0.00 0.00 36.66 4.01
285 286 6.543430 TTGCTTAATCCATAATGTTGGCTT 57.457 33.333 0.00 0.00 36.66 4.35
286 287 6.518493 CATTGCTTAATCCATAATGTTGGCT 58.482 36.000 0.00 0.00 36.66 4.75
287 288 5.178067 GCATTGCTTAATCCATAATGTTGGC 59.822 40.000 0.16 0.00 36.66 4.52
288 289 5.697633 GGCATTGCTTAATCCATAATGTTGG 59.302 40.000 8.82 0.00 38.18 3.77
289 290 6.201425 GTGGCATTGCTTAATCCATAATGTTG 59.799 38.462 8.82 0.00 32.75 3.33
290 291 6.098695 AGTGGCATTGCTTAATCCATAATGTT 59.901 34.615 8.82 0.00 32.75 2.71
291 292 5.599656 AGTGGCATTGCTTAATCCATAATGT 59.400 36.000 8.82 0.00 32.75 2.71
292 293 6.092955 AGTGGCATTGCTTAATCCATAATG 57.907 37.500 8.82 0.00 33.18 1.90
293 294 5.834742 TGAGTGGCATTGCTTAATCCATAAT 59.165 36.000 8.82 0.00 0.00 1.28
294 295 5.199723 TGAGTGGCATTGCTTAATCCATAA 58.800 37.500 8.82 0.00 0.00 1.90
295 296 4.790937 TGAGTGGCATTGCTTAATCCATA 58.209 39.130 8.82 0.00 0.00 2.74
296 297 3.634504 TGAGTGGCATTGCTTAATCCAT 58.365 40.909 8.82 0.00 0.00 3.41
297 298 3.084536 TGAGTGGCATTGCTTAATCCA 57.915 42.857 8.82 0.00 0.00 3.41
298 299 5.772825 TTATGAGTGGCATTGCTTAATCC 57.227 39.130 8.82 0.00 38.44 3.01
299 300 8.139989 AGAAATTATGAGTGGCATTGCTTAATC 58.860 33.333 8.82 7.63 38.44 1.75
300 301 8.015185 AGAAATTATGAGTGGCATTGCTTAAT 57.985 30.769 8.82 0.00 38.44 1.40
301 302 7.408756 AGAAATTATGAGTGGCATTGCTTAA 57.591 32.000 8.82 0.00 38.44 1.85
302 303 7.093814 ACAAGAAATTATGAGTGGCATTGCTTA 60.094 33.333 8.82 0.00 38.44 3.09
303 304 5.927281 AGAAATTATGAGTGGCATTGCTT 57.073 34.783 8.82 0.00 38.44 3.91
304 305 5.186409 ACAAGAAATTATGAGTGGCATTGCT 59.814 36.000 8.82 0.00 38.44 3.91
305 306 5.290158 CACAAGAAATTATGAGTGGCATTGC 59.710 40.000 0.00 0.00 38.44 3.56
306 307 5.808540 CCACAAGAAATTATGAGTGGCATTG 59.191 40.000 0.00 0.00 39.89 2.82
307 308 5.105228 CCCACAAGAAATTATGAGTGGCATT 60.105 40.000 12.20 0.00 43.85 3.56
308 309 4.403432 CCCACAAGAAATTATGAGTGGCAT 59.597 41.667 12.20 0.00 43.85 4.40
309 310 3.763360 CCCACAAGAAATTATGAGTGGCA 59.237 43.478 12.20 0.00 43.85 4.92
310 311 3.763897 ACCCACAAGAAATTATGAGTGGC 59.236 43.478 12.20 0.00 43.85 5.01
311 312 4.380867 GCACCCACAAGAAATTATGAGTGG 60.381 45.833 11.18 11.18 44.58 4.00
312 313 4.218200 TGCACCCACAAGAAATTATGAGTG 59.782 41.667 0.00 0.00 0.00 3.51
313 314 4.218417 GTGCACCCACAAGAAATTATGAGT 59.782 41.667 5.22 0.00 41.67 3.41
314 315 4.460382 AGTGCACCCACAAGAAATTATGAG 59.540 41.667 14.63 0.00 44.53 2.90
315 316 4.406456 AGTGCACCCACAAGAAATTATGA 58.594 39.130 14.63 0.00 44.53 2.15
316 317 4.789012 AGTGCACCCACAAGAAATTATG 57.211 40.909 14.63 0.00 44.53 1.90
317 318 5.806654 AAAGTGCACCCACAAGAAATTAT 57.193 34.783 14.63 0.00 44.53 1.28
318 319 5.606348 AAAAGTGCACCCACAAGAAATTA 57.394 34.783 14.63 0.00 44.53 1.40
319 320 4.486125 AAAAGTGCACCCACAAGAAATT 57.514 36.364 14.63 0.00 44.53 1.82
320 321 4.486125 AAAAAGTGCACCCACAAGAAAT 57.514 36.364 14.63 0.00 44.53 2.17
328 329 9.213799 GAAATTTATGATTAAAAAGTGCACCCA 57.786 29.630 14.63 0.00 31.33 4.51
333 334 9.759259 GCCAAGAAATTTATGATTAAAAAGTGC 57.241 29.630 5.29 0.00 31.33 4.40
371 375 5.359194 ACATGGGTTAATCAGTACTCCTG 57.641 43.478 0.00 0.00 42.97 3.86
400 404 2.953821 CCACGCGCATTTGTTCCT 59.046 55.556 5.73 0.00 0.00 3.36
401 405 2.804931 GCCACGCGCATTTGTTCC 60.805 61.111 5.73 0.00 37.47 3.62
402 406 2.050533 TGCCACGCGCATTTGTTC 60.051 55.556 5.73 0.00 44.64 3.18
533 542 5.220453 GCAATATTTTCAATTGTTGAGGGCG 60.220 40.000 5.13 0.00 41.38 6.13
547 556 5.407995 CGAGGGATCTCTCTGCAATATTTTC 59.592 44.000 20.34 0.00 37.86 2.29
550 559 3.306641 GCGAGGGATCTCTCTGCAATATT 60.307 47.826 24.99 0.00 37.86 1.28
561 570 0.532573 TGTGACTTGCGAGGGATCTC 59.467 55.000 5.79 0.00 36.69 2.75
851 863 3.969995 GGCCGTAGAGAGCCTTAAG 57.030 57.895 0.00 0.00 46.14 1.85
867 879 5.105837 CCAACGGAAGATAGTAGGTATAGGC 60.106 48.000 0.00 0.00 0.00 3.93
869 881 8.804912 ATACCAACGGAAGATAGTAGGTATAG 57.195 38.462 0.00 0.00 38.82 1.31
874 889 6.490721 AGAGAATACCAACGGAAGATAGTAGG 59.509 42.308 0.00 0.00 0.00 3.18
878 893 6.392625 TCAGAGAATACCAACGGAAGATAG 57.607 41.667 0.00 0.00 0.00 2.08
923 938 3.269178 GGAGTTGGAGAAATCTGCAGAG 58.731 50.000 22.96 0.00 44.96 3.35
937 952 1.069500 CGTAAAAGCGGTTGGAGTTGG 60.069 52.381 0.00 0.00 0.00 3.77
948 963 2.350102 GGAACCAAGAACCGTAAAAGCG 60.350 50.000 0.00 0.00 0.00 4.68
949 964 2.350102 CGGAACCAAGAACCGTAAAAGC 60.350 50.000 0.00 0.00 41.47 3.51
950 965 3.132925 TCGGAACCAAGAACCGTAAAAG 58.867 45.455 0.00 0.00 45.71 2.27
951 966 3.132925 CTCGGAACCAAGAACCGTAAAA 58.867 45.455 0.00 0.00 45.71 1.52
984 999 4.256180 ATGCCGCCGGATTCTCCC 62.256 66.667 7.68 0.00 31.13 4.30
985 1000 2.974698 CATGCCGCCGGATTCTCC 60.975 66.667 7.68 0.00 0.00 3.71
998 1013 3.329542 TTGGTCTCGCTCCCCATGC 62.330 63.158 0.00 0.00 0.00 4.06
1012 1027 4.223923 CCTTCTGTACTTCATCTCCTTGGT 59.776 45.833 0.00 0.00 0.00 3.67
1292 1316 2.044650 AGCGGTAGTACTCCGGCA 60.045 61.111 25.19 0.00 46.90 5.69
1380 1404 4.111016 TGCCTCGCGTACCTGTCG 62.111 66.667 5.77 0.00 0.00 4.35
1602 1626 4.843101 GACGATATCGACGAGGCC 57.157 61.111 30.75 0.00 43.02 5.19
1620 1644 3.507290 GACCTCCGGTCGTACTCC 58.493 66.667 0.00 0.00 43.14 3.85
1653 1677 2.000447 GACATGGAAAGGTGCGAGTAC 59.000 52.381 0.00 0.00 0.00 2.73
1668 1692 3.244700 ACTCAACCCTTCTCTTGGACATG 60.245 47.826 0.00 0.00 0.00 3.21
1686 1710 1.276421 GCCCTCTTGCTGAAGTACTCA 59.724 52.381 0.00 0.00 0.00 3.41
1899 1929 4.776349 TCACACTGTTTGGTACACTGAAT 58.224 39.130 0.00 0.00 39.29 2.57
1914 1944 2.528125 CGATCTGAGCTTCTCACACTG 58.472 52.381 0.00 0.00 35.39 3.66
1929 1959 4.841617 TGAGGAGCCCGGCGATCT 62.842 66.667 9.30 4.17 0.00 2.75
2127 2157 4.400251 TCTTTTGGGCTATCTGCAAATCTG 59.600 41.667 0.00 0.00 45.15 2.90
2163 2193 0.177604 CCTGACTGTCTGCATCTCCC 59.822 60.000 9.51 0.00 0.00 4.30
2183 2213 1.999735 TGCGAATAACTGAAGCTTCGG 59.000 47.619 29.76 29.76 40.48 4.30
2235 2265 5.275067 TGGAAAAGGGATCAACAAGTTTG 57.725 39.130 0.00 0.00 0.00 2.93
2421 2451 7.229306 TGTTTGAGATATTTCTGTCCATATGCC 59.771 37.037 0.00 0.00 30.30 4.40
2422 2452 8.158169 TGTTTGAGATATTTCTGTCCATATGC 57.842 34.615 0.00 0.00 30.30 3.14
2530 2560 7.094634 CCTTTTGCTTGTAGCTTCATCTTCTAA 60.095 37.037 0.00 0.00 42.97 2.10
2532 2562 5.182760 CCTTTTGCTTGTAGCTTCATCTTCT 59.817 40.000 0.00 0.00 42.97 2.85
2588 2618 8.774586 TCTTATTAACACTCTGAACTTCAAAGC 58.225 33.333 0.00 0.00 0.00 3.51
2601 2631 9.011407 CAGTTGTCGTATCTCTTATTAACACTC 57.989 37.037 0.00 0.00 0.00 3.51
2602 2632 7.488471 GCAGTTGTCGTATCTCTTATTAACACT 59.512 37.037 0.00 0.00 0.00 3.55
2604 2634 7.317390 TGCAGTTGTCGTATCTCTTATTAACA 58.683 34.615 0.00 0.00 0.00 2.41
2940 2970 5.618236 TCAGAGATTGGATGACCATTGATC 58.382 41.667 0.00 0.00 46.34 2.92
3034 3064 6.276832 ACATGTTCTGAATTCCAAATGAGG 57.723 37.500 2.27 0.00 0.00 3.86
3134 3164 8.725148 CAGCATCTAAGAAAAGTGTATGTTCTT 58.275 33.333 3.63 3.63 42.65 2.52
3201 3239 9.729281 TCTCACCGTTAAACCTAATTTATTCTT 57.271 29.630 0.00 0.00 32.71 2.52
3211 3249 6.288941 TCATGATTCTCACCGTTAAACCTA 57.711 37.500 0.00 0.00 0.00 3.08
3212 3250 5.160607 TCATGATTCTCACCGTTAAACCT 57.839 39.130 0.00 0.00 0.00 3.50
3248 3286 4.155280 GCATGGTCGTTTTATAACAGTGGT 59.845 41.667 0.00 0.00 33.75 4.16
3263 3301 0.107508 AGTGGAATCAGGCATGGTCG 60.108 55.000 0.00 0.00 0.00 4.79
3266 3304 0.681887 TGCAGTGGAATCAGGCATGG 60.682 55.000 0.00 0.00 31.90 3.66
3315 3353 4.511617 AGCAAAGCCTTCTTTCTTTAGC 57.488 40.909 0.00 0.00 40.35 3.09
3509 3569 8.144478 TCTAAGTATACTCATCAGAATGTTGCC 58.856 37.037 5.70 0.00 35.81 4.52
3523 3583 8.624367 TCTGTATCTGCCTTCTAAGTATACTC 57.376 38.462 5.70 0.00 0.00 2.59
3600 3667 5.957842 AGATCTAACGGAATTGCAACAAA 57.042 34.783 0.00 0.00 0.00 2.83
3794 3861 3.515104 GGAAAGCATCCCATGGAAAAGAA 59.485 43.478 15.22 0.00 43.00 2.52
3814 3882 1.202592 TGCAAACACGCAGTTCTAGGA 60.203 47.619 0.00 0.00 41.61 2.94
4118 4192 6.841755 ACATATAGATATAGCCCACTCTTCCC 59.158 42.308 0.00 0.00 0.00 3.97
4214 4300 5.067954 TCTAGAAACCCAAAACTACTTGGC 58.932 41.667 0.00 0.00 43.97 4.52
4227 4313 7.308710 CCGAAGACTGTAGATATCTAGAAACCC 60.309 44.444 12.87 1.16 0.00 4.11
4259 4345 5.589367 ACATATCACTAATGCCAGGGAAT 57.411 39.130 0.00 0.00 30.04 3.01
4278 4364 9.139734 AGCCATTAGATGATTTGTCAAATACAT 57.860 29.630 10.80 14.36 38.10 2.29
4319 4405 6.611236 TCCATATCAAGTAGTGAATCACAGGA 59.389 38.462 16.38 5.67 40.50 3.86
4339 4425 6.296432 CCCTGCTGCTAGGTAATTAATCCATA 60.296 42.308 14.25 0.00 36.02 2.74
4347 4433 1.490910 GTCCCCTGCTGCTAGGTAATT 59.509 52.381 14.25 0.00 36.02 1.40
4348 4434 1.132500 GTCCCCTGCTGCTAGGTAAT 58.868 55.000 14.25 0.00 36.02 1.89
4349 4435 0.042731 AGTCCCCTGCTGCTAGGTAA 59.957 55.000 14.25 2.91 36.02 2.85
4350 4436 0.687757 CAGTCCCCTGCTGCTAGGTA 60.688 60.000 14.25 3.17 36.02 3.08
4374 4460 7.120579 CACACTGACTTTGGCCTATTATGTTTA 59.879 37.037 3.32 0.00 0.00 2.01
4375 4461 6.010219 ACACTGACTTTGGCCTATTATGTTT 58.990 36.000 3.32 0.00 0.00 2.83
4377 4463 4.943705 CACACTGACTTTGGCCTATTATGT 59.056 41.667 3.32 0.00 0.00 2.29
4378 4464 4.336433 CCACACTGACTTTGGCCTATTATG 59.664 45.833 3.32 0.00 0.00 1.90
4379 4465 4.018415 ACCACACTGACTTTGGCCTATTAT 60.018 41.667 3.32 0.00 33.25 1.28
4418 4504 4.397420 ACAAATGATGTTGACCTACTGCA 58.603 39.130 0.00 0.00 40.06 4.41
4462 4548 4.733850 GGTTTAGAATAACCACAGCAAGC 58.266 43.478 0.00 0.00 45.59 4.01
4478 4564 9.540431 CAAACAACAATTGAACAAAAGGTTTAG 57.460 29.630 13.59 3.20 40.63 1.85
4558 4644 2.159934 CGTTTCCATACGACGACCAAAC 60.160 50.000 0.00 2.64 43.99 2.93
4572 4658 2.670789 GCATAATGCTTGCACGTTTCCA 60.671 45.455 0.00 0.00 40.96 3.53
4593 4679 9.129209 GTGGCTAAAAGCAATAAAAAGTTCTAG 57.871 33.333 0.78 0.00 44.75 2.43
4724 4815 8.772705 TCATTTGAAAATTGAAATGGTTAGTGC 58.227 29.630 15.00 0.00 40.59 4.40
4793 4884 8.346300 TCATAAGAGTGCTAACTTATCTCTTCG 58.654 37.037 8.64 3.63 42.17 3.79
4814 4905 7.727634 AGGAGACATCATCATAGACTGTCATAA 59.272 37.037 10.88 0.00 38.90 1.90
4863 4956 2.667473 AAATGCAGCTTTCTGATGGC 57.333 45.000 0.00 0.00 42.95 4.40
4867 4960 2.034432 TCGCAAAAATGCAGCTTTCTGA 59.966 40.909 0.00 0.00 42.95 3.27
4925 5018 4.441079 GCCGCAAGAAGTAGTATGGTCTAA 60.441 45.833 0.00 0.00 43.02 2.10
5003 5096 4.579869 TCTCAAGTAAAGGAATGGAGTGC 58.420 43.478 0.00 0.00 0.00 4.40
5034 5127 2.969262 TCTGCCCGAATATACCATCACA 59.031 45.455 0.00 0.00 0.00 3.58
5063 5252 1.421646 ACAACAGGAGGAACTTGGAGG 59.578 52.381 0.00 0.00 41.55 4.30
5135 5328 3.139025 ACATTCCAATGCCTACCTATGCT 59.861 43.478 0.00 0.00 40.04 3.79
5259 5494 0.391597 TCCGGAACAAGACAGGTGTC 59.608 55.000 0.00 1.60 45.08 3.67
5273 5508 5.181433 CAGATAGTAATCGTGATTCTCCGGA 59.819 44.000 2.93 2.93 37.19 5.14
5276 5511 6.971602 TGACAGATAGTAATCGTGATTCTCC 58.028 40.000 0.00 0.00 37.19 3.71
5344 5590 2.754552 ACAAAGAACAGAGTTGCAGCAA 59.245 40.909 2.83 2.83 0.00 3.91
5360 5606 4.811024 TCAGACAAGAACAGCAGTACAAAG 59.189 41.667 0.00 0.00 0.00 2.77
5401 5650 1.539827 CAACATTGACCGGGAGAAACC 59.460 52.381 6.32 0.00 38.08 3.27
5498 5756 5.622378 GTCAGCTTGACTCGGATTAAAAAG 58.378 41.667 8.50 0.00 43.73 2.27
5567 5825 3.766591 AGACAACTGAAGATCGGACTGAT 59.233 43.478 0.00 0.00 41.06 2.90
5569 5827 3.584406 AGACAACTGAAGATCGGACTG 57.416 47.619 0.00 0.00 0.00 3.51
5570 5828 3.862642 GCAAGACAACTGAAGATCGGACT 60.863 47.826 0.00 0.00 0.00 3.85
5571 5829 2.413453 GCAAGACAACTGAAGATCGGAC 59.587 50.000 0.00 0.00 0.00 4.79
5572 5830 2.300152 AGCAAGACAACTGAAGATCGGA 59.700 45.455 0.00 0.00 0.00 4.55
5573 5831 2.693069 AGCAAGACAACTGAAGATCGG 58.307 47.619 0.00 0.00 0.00 4.18
5606 5865 2.177284 GCGCGGCGGTAAAATGTT 59.823 55.556 25.03 0.00 0.00 2.71
5646 5905 9.793259 AACATTAGTATCCTCAAAGAACAAGAA 57.207 29.630 0.00 0.00 0.00 2.52
5647 5906 9.793259 AAACATTAGTATCCTCAAAGAACAAGA 57.207 29.630 0.00 0.00 0.00 3.02
5655 5914 9.104965 CGGTGAATAAACATTAGTATCCTCAAA 57.895 33.333 0.00 0.00 0.00 2.69
5656 5915 7.713507 CCGGTGAATAAACATTAGTATCCTCAA 59.286 37.037 0.00 0.00 0.00 3.02
5657 5916 7.070198 TCCGGTGAATAAACATTAGTATCCTCA 59.930 37.037 0.00 0.00 0.00 3.86
5703 5962 6.734104 AGTGCATCTAGATCACTTTTGAAC 57.266 37.500 22.02 9.94 37.78 3.18
5721 5980 8.956426 CCCTCTGTAAAAAGAAATATAAGTGCA 58.044 33.333 0.00 0.00 0.00 4.57
5722 5981 9.174166 TCCCTCTGTAAAAAGAAATATAAGTGC 57.826 33.333 0.00 0.00 0.00 4.40
5730 5989 9.286170 GAACTTACTCCCTCTGTAAAAAGAAAT 57.714 33.333 0.00 0.00 30.72 2.17
5731 5990 7.440255 CGAACTTACTCCCTCTGTAAAAAGAAA 59.560 37.037 0.00 0.00 30.72 2.52
5732 5991 6.927381 CGAACTTACTCCCTCTGTAAAAAGAA 59.073 38.462 0.00 0.00 30.72 2.52
5733 5992 6.266103 TCGAACTTACTCCCTCTGTAAAAAGA 59.734 38.462 0.00 0.00 30.72 2.52
5734 5993 6.453092 TCGAACTTACTCCCTCTGTAAAAAG 58.547 40.000 0.00 0.00 30.72 2.27
5735 5994 6.409524 TCGAACTTACTCCCTCTGTAAAAA 57.590 37.500 0.00 0.00 30.72 1.94
5736 5995 6.183360 TGTTCGAACTTACTCCCTCTGTAAAA 60.183 38.462 27.32 0.00 30.72 1.52
5737 5996 5.302568 TGTTCGAACTTACTCCCTCTGTAAA 59.697 40.000 27.32 0.00 30.72 2.01
5738 5997 4.828939 TGTTCGAACTTACTCCCTCTGTAA 59.171 41.667 27.32 0.00 0.00 2.41
5739 5998 4.401022 TGTTCGAACTTACTCCCTCTGTA 58.599 43.478 27.32 0.52 0.00 2.74
5740 5999 3.228453 TGTTCGAACTTACTCCCTCTGT 58.772 45.455 27.32 0.00 0.00 3.41
5741 6000 3.936372 TGTTCGAACTTACTCCCTCTG 57.064 47.619 27.32 0.00 0.00 3.35
5742 6001 3.640029 TGTTGTTCGAACTTACTCCCTCT 59.360 43.478 27.32 0.00 0.00 3.69
5743 6002 3.739810 GTGTTGTTCGAACTTACTCCCTC 59.260 47.826 27.32 11.52 0.00 4.30
5744 6003 3.387050 AGTGTTGTTCGAACTTACTCCCT 59.613 43.478 27.32 17.50 0.00 4.20
5745 6004 3.725490 AGTGTTGTTCGAACTTACTCCC 58.275 45.455 27.32 16.01 0.00 4.30
5746 6005 4.807304 TGAAGTGTTGTTCGAACTTACTCC 59.193 41.667 27.32 16.77 34.37 3.85
5747 6006 5.290158 TGTGAAGTGTTGTTCGAACTTACTC 59.710 40.000 27.32 22.51 34.37 2.59
5752 6011 3.617263 GTCTGTGAAGTGTTGTTCGAACT 59.383 43.478 27.32 7.52 0.00 3.01
5767 6026 2.093816 CAGCTGGAGCATAAGTCTGTGA 60.094 50.000 5.57 0.00 45.16 3.58
5771 6030 5.085920 AGATATCAGCTGGAGCATAAGTCT 58.914 41.667 15.13 2.57 45.16 3.24
5776 6035 4.952957 GTCCTAGATATCAGCTGGAGCATA 59.047 45.833 15.13 4.51 45.16 3.14
5777 6036 3.768757 GTCCTAGATATCAGCTGGAGCAT 59.231 47.826 15.13 2.01 45.16 3.79
5778 6037 3.161067 GTCCTAGATATCAGCTGGAGCA 58.839 50.000 15.13 0.00 45.16 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.