Multiple sequence alignment - TraesCS1B01G455800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G455800 chr1B 100.000 3566 0 0 1 3566 670746203 670742638 0.000000e+00 6586
1 TraesCS1B01G455800 chr1B 86.236 1780 170 32 922 2680 675648006 675649731 0.000000e+00 1860
2 TraesCS1B01G455800 chr1B 77.883 1587 268 56 1000 2564 675697901 675699426 0.000000e+00 909
3 TraesCS1B01G455800 chr1B 87.761 719 66 10 2854 3566 61630774 61631476 0.000000e+00 821
4 TraesCS1B01G455800 chr1B 99.197 249 2 0 2853 3101 670738142 670737894 1.950000e-122 449
5 TraesCS1B01G455800 chr1B 92.308 117 9 0 2736 2852 675649737 675649853 2.200000e-37 167
6 TraesCS1B01G455800 chr1D 94.137 2439 77 22 450 2852 481058010 481060418 0.000000e+00 3651
7 TraesCS1B01G455800 chr1D 83.532 1761 176 58 816 2523 485249038 485250737 0.000000e+00 1541
8 TraesCS1B01G455800 chr1D 87.344 719 82 9 2853 3566 445255468 445256182 0.000000e+00 815
9 TraesCS1B01G455800 chr1D 92.655 531 36 3 3038 3566 449307716 449307187 0.000000e+00 761
10 TraesCS1B01G455800 chr1D 94.636 261 9 3 2511 2769 481072567 481072824 1.990000e-107 399
11 TraesCS1B01G455800 chr1D 89.179 268 24 4 2586 2852 485250738 485251001 2.650000e-86 329
12 TraesCS1B01G455800 chr1D 81.627 381 50 14 1814 2191 485324004 485324367 7.480000e-77 298
13 TraesCS1B01G455800 chr1D 96.899 129 4 0 450 578 481036241 481036369 2.160000e-52 217
14 TraesCS1B01G455800 chr1A 88.213 1069 96 13 1784 2851 582543185 582544224 0.000000e+00 1249
15 TraesCS1B01G455800 chr1A 84.052 928 95 18 869 1781 582534675 582535564 0.000000e+00 845
16 TraesCS1B01G455800 chr1A 85.253 217 30 1 1977 2191 582507609 582507825 4.630000e-54 222
17 TraesCS1B01G455800 chr3B 92.448 715 41 5 2853 3566 808523766 808523064 0.000000e+00 1009
18 TraesCS1B01G455800 chr3B 91.061 716 60 4 2853 3566 188434342 188433629 0.000000e+00 965
19 TraesCS1B01G455800 chr3B 92.248 516 38 2 3052 3566 50190660 50191174 0.000000e+00 730
20 TraesCS1B01G455800 chr3B 91.475 434 36 1 16 449 115557482 115557050 2.370000e-166 595
21 TraesCS1B01G455800 chr3B 91.667 432 32 4 16 447 598225706 598225279 2.370000e-166 595
22 TraesCS1B01G455800 chr2A 86.269 721 87 11 2852 3566 467947765 467947051 0.000000e+00 773
23 TraesCS1B01G455800 chr7D 86.150 722 86 13 2853 3566 166300759 166300044 0.000000e+00 767
24 TraesCS1B01G455800 chr2D 83.380 710 95 21 2867 3566 411614299 411613603 1.400000e-178 636
25 TraesCS1B01G455800 chr2D 91.954 435 33 2 16 449 549067199 549067632 3.040000e-170 608
26 TraesCS1B01G455800 chr2D 80.078 256 36 12 2853 3100 43100719 43100471 3.660000e-40 176
27 TraesCS1B01G455800 chr2B 91.818 440 35 1 16 455 360966581 360966143 2.350000e-171 612
28 TraesCS1B01G455800 chr6B 91.743 436 34 2 16 450 237201917 237201483 3.940000e-169 604
29 TraesCS1B01G455800 chr5B 91.705 434 35 1 16 449 243518948 243518516 5.090000e-168 601
30 TraesCS1B01G455800 chr5B 90.909 440 39 1 16 455 243666207 243665769 1.100000e-164 590
31 TraesCS1B01G455800 chr7B 91.841 429 33 2 16 444 435922073 435922499 6.590000e-167 597
32 TraesCS1B01G455800 chr7B 90.000 460 40 2 1 455 92550740 92550282 1.100000e-164 590
33 TraesCS1B01G455800 chr4B 93.902 82 4 1 2876 2956 223133677 223133758 4.830000e-24 122


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G455800 chr1B 670742638 670746203 3565 True 6586.0 6586 100.0000 1 3566 1 chr1B.!!$R2 3565
1 TraesCS1B01G455800 chr1B 675648006 675649853 1847 False 1013.5 1860 89.2720 922 2852 2 chr1B.!!$F3 1930
2 TraesCS1B01G455800 chr1B 675697901 675699426 1525 False 909.0 909 77.8830 1000 2564 1 chr1B.!!$F2 1564
3 TraesCS1B01G455800 chr1B 61630774 61631476 702 False 821.0 821 87.7610 2854 3566 1 chr1B.!!$F1 712
4 TraesCS1B01G455800 chr1D 481058010 481060418 2408 False 3651.0 3651 94.1370 450 2852 1 chr1D.!!$F3 2402
5 TraesCS1B01G455800 chr1D 485249038 485251001 1963 False 935.0 1541 86.3555 816 2852 2 chr1D.!!$F6 2036
6 TraesCS1B01G455800 chr1D 445255468 445256182 714 False 815.0 815 87.3440 2853 3566 1 chr1D.!!$F1 713
7 TraesCS1B01G455800 chr1D 449307187 449307716 529 True 761.0 761 92.6550 3038 3566 1 chr1D.!!$R1 528
8 TraesCS1B01G455800 chr1A 582543185 582544224 1039 False 1249.0 1249 88.2130 1784 2851 1 chr1A.!!$F3 1067
9 TraesCS1B01G455800 chr1A 582534675 582535564 889 False 845.0 845 84.0520 869 1781 1 chr1A.!!$F2 912
10 TraesCS1B01G455800 chr3B 808523064 808523766 702 True 1009.0 1009 92.4480 2853 3566 1 chr3B.!!$R4 713
11 TraesCS1B01G455800 chr3B 188433629 188434342 713 True 965.0 965 91.0610 2853 3566 1 chr3B.!!$R2 713
12 TraesCS1B01G455800 chr3B 50190660 50191174 514 False 730.0 730 92.2480 3052 3566 1 chr3B.!!$F1 514
13 TraesCS1B01G455800 chr2A 467947051 467947765 714 True 773.0 773 86.2690 2852 3566 1 chr2A.!!$R1 714
14 TraesCS1B01G455800 chr7D 166300044 166300759 715 True 767.0 767 86.1500 2853 3566 1 chr7D.!!$R1 713
15 TraesCS1B01G455800 chr2D 411613603 411614299 696 True 636.0 636 83.3800 2867 3566 1 chr2D.!!$R2 699

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
56 57 0.040204 CCAAGGCCCAAGGATGACTT 59.960 55.0 0.00 0.00 41.00 3.01 F
700 726 0.104304 ATGGGACCACGCGTTATCTC 59.896 55.0 10.22 11.12 0.00 2.75 F
1327 1372 0.179009 CCACGGCTGGATGGATGAAT 60.179 55.0 0.00 0.00 40.55 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1610 1682 0.172578 TACATCGTCAGCGGTTCCAG 59.827 55.0 0.00 0.00 38.89 3.86 R
2419 2521 0.451783 GCTACCATTGAACAAGGGCG 59.548 55.0 16.42 9.98 45.45 6.13 R
3250 3392 0.106335 TTTCTTCGCCGTGGTTACCA 59.894 50.0 0.00 0.00 0.00 3.25 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.260844 CATGAGGATACATGGCGGTT 57.739 50.000 0.00 0.00 42.45 4.44
24 25 2.146342 CATGAGGATACATGGCGGTTC 58.854 52.381 0.00 0.00 42.45 3.62
25 26 1.199615 TGAGGATACATGGCGGTTCA 58.800 50.000 0.00 0.00 41.41 3.18
26 27 1.134521 TGAGGATACATGGCGGTTCAC 60.135 52.381 0.00 0.00 41.41 3.18
27 28 0.908910 AGGATACATGGCGGTTCACA 59.091 50.000 0.00 0.00 41.41 3.58
28 29 1.134401 AGGATACATGGCGGTTCACAG 60.134 52.381 0.00 0.00 41.41 3.66
29 30 1.299541 GATACATGGCGGTTCACAGG 58.700 55.000 0.00 0.00 0.00 4.00
30 31 0.748005 ATACATGGCGGTTCACAGGC 60.748 55.000 0.00 0.00 37.15 4.85
33 34 2.594303 TGGCGGTTCACAGGCAAG 60.594 61.111 3.85 0.00 42.77 4.01
34 35 3.365265 GGCGGTTCACAGGCAAGG 61.365 66.667 0.00 0.00 36.67 3.61
35 36 3.365265 GCGGTTCACAGGCAAGGG 61.365 66.667 0.00 0.00 0.00 3.95
36 37 3.365265 CGGTTCACAGGCAAGGGC 61.365 66.667 0.00 0.00 40.13 5.19
52 53 2.761213 GCCCAAGGCCCAAGGATG 60.761 66.667 0.00 0.00 44.06 3.51
53 54 3.099171 CCCAAGGCCCAAGGATGA 58.901 61.111 0.00 0.00 0.00 2.92
54 55 1.380380 CCCAAGGCCCAAGGATGAC 60.380 63.158 0.00 0.00 0.00 3.06
55 56 1.693640 CCAAGGCCCAAGGATGACT 59.306 57.895 0.00 0.00 0.00 3.41
56 57 0.040204 CCAAGGCCCAAGGATGACTT 59.960 55.000 0.00 0.00 41.00 3.01
57 58 1.284785 CCAAGGCCCAAGGATGACTTA 59.715 52.381 0.00 0.00 37.29 2.24
58 59 2.291540 CCAAGGCCCAAGGATGACTTAA 60.292 50.000 0.00 0.00 37.29 1.85
59 60 3.019564 CAAGGCCCAAGGATGACTTAAG 58.980 50.000 0.00 0.00 37.29 1.85
60 61 1.566231 AGGCCCAAGGATGACTTAAGG 59.434 52.381 7.53 0.00 37.29 2.69
61 62 1.393603 GCCCAAGGATGACTTAAGGC 58.606 55.000 7.53 3.92 45.21 4.35
62 63 2.024306 GCCCAAGGATGACTTAAGGCC 61.024 57.143 5.69 0.00 45.44 5.19
63 64 1.410224 CCCAAGGATGACTTAAGGCCC 60.410 57.143 5.69 0.00 37.29 5.80
64 65 1.284785 CCAAGGATGACTTAAGGCCCA 59.715 52.381 5.69 1.40 37.29 5.36
65 66 2.091665 CCAAGGATGACTTAAGGCCCAT 60.092 50.000 5.69 6.43 37.29 4.00
66 67 3.138283 CCAAGGATGACTTAAGGCCCATA 59.862 47.826 5.69 0.00 37.29 2.74
67 68 4.392940 CAAGGATGACTTAAGGCCCATAG 58.607 47.826 5.69 0.00 37.29 2.23
68 69 3.941629 AGGATGACTTAAGGCCCATAGA 58.058 45.455 5.69 0.00 0.00 1.98
69 70 4.307259 AGGATGACTTAAGGCCCATAGAA 58.693 43.478 5.69 0.00 0.00 2.10
70 71 4.349342 AGGATGACTTAAGGCCCATAGAAG 59.651 45.833 5.69 0.00 0.00 2.85
71 72 4.103311 GGATGACTTAAGGCCCATAGAAGT 59.897 45.833 5.69 1.69 33.14 3.01
72 73 5.307196 GGATGACTTAAGGCCCATAGAAGTA 59.693 44.000 5.69 0.00 30.66 2.24
73 74 6.183361 GGATGACTTAAGGCCCATAGAAGTAA 60.183 42.308 5.69 0.00 30.66 2.24
74 75 6.630203 TGACTTAAGGCCCATAGAAGTAAA 57.370 37.500 5.69 0.00 30.66 2.01
75 76 6.412214 TGACTTAAGGCCCATAGAAGTAAAC 58.588 40.000 5.69 0.00 30.66 2.01
76 77 5.752650 ACTTAAGGCCCATAGAAGTAAACC 58.247 41.667 7.53 0.00 0.00 3.27
77 78 3.277142 AAGGCCCATAGAAGTAAACCG 57.723 47.619 0.00 0.00 0.00 4.44
78 79 1.134189 AGGCCCATAGAAGTAAACCGC 60.134 52.381 0.00 0.00 0.00 5.68
79 80 1.306148 GCCCATAGAAGTAAACCGCC 58.694 55.000 0.00 0.00 0.00 6.13
80 81 1.407712 GCCCATAGAAGTAAACCGCCA 60.408 52.381 0.00 0.00 0.00 5.69
81 82 2.748465 GCCCATAGAAGTAAACCGCCAT 60.748 50.000 0.00 0.00 0.00 4.40
82 83 3.495453 GCCCATAGAAGTAAACCGCCATA 60.495 47.826 0.00 0.00 0.00 2.74
83 84 4.806286 GCCCATAGAAGTAAACCGCCATAT 60.806 45.833 0.00 0.00 0.00 1.78
84 85 4.695455 CCCATAGAAGTAAACCGCCATATG 59.305 45.833 0.00 0.00 0.00 1.78
85 86 5.305585 CCATAGAAGTAAACCGCCATATGT 58.694 41.667 1.24 0.00 0.00 2.29
86 87 5.179368 CCATAGAAGTAAACCGCCATATGTG 59.821 44.000 1.24 0.00 0.00 3.21
87 88 4.216411 AGAAGTAAACCGCCATATGTGT 57.784 40.909 1.24 0.00 0.00 3.72
88 89 5.347620 AGAAGTAAACCGCCATATGTGTA 57.652 39.130 1.24 0.00 0.00 2.90
89 90 5.736813 AGAAGTAAACCGCCATATGTGTAA 58.263 37.500 1.24 0.00 0.00 2.41
90 91 5.815740 AGAAGTAAACCGCCATATGTGTAAG 59.184 40.000 1.24 0.00 0.00 2.34
91 92 5.347620 AGTAAACCGCCATATGTGTAAGA 57.652 39.130 1.24 0.00 0.00 2.10
92 93 5.114081 AGTAAACCGCCATATGTGTAAGAC 58.886 41.667 1.24 0.00 0.00 3.01
93 94 3.906720 AACCGCCATATGTGTAAGACT 57.093 42.857 1.24 0.00 0.00 3.24
94 95 3.906720 ACCGCCATATGTGTAAGACTT 57.093 42.857 1.24 0.00 0.00 3.01
95 96 3.531538 ACCGCCATATGTGTAAGACTTG 58.468 45.455 1.24 0.00 0.00 3.16
96 97 3.055385 ACCGCCATATGTGTAAGACTTGT 60.055 43.478 1.24 0.00 0.00 3.16
97 98 4.160814 ACCGCCATATGTGTAAGACTTGTA 59.839 41.667 1.24 0.00 0.00 2.41
98 99 5.163343 ACCGCCATATGTGTAAGACTTGTAT 60.163 40.000 1.24 0.00 0.00 2.29
99 100 5.177511 CCGCCATATGTGTAAGACTTGTATG 59.822 44.000 1.24 0.05 0.00 2.39
100 101 5.177511 CGCCATATGTGTAAGACTTGTATGG 59.822 44.000 1.24 14.53 37.79 2.74
101 102 6.055588 GCCATATGTGTAAGACTTGTATGGT 58.944 40.000 17.29 0.00 37.46 3.55
102 103 7.214381 GCCATATGTGTAAGACTTGTATGGTA 58.786 38.462 17.29 1.60 37.46 3.25
103 104 7.713507 GCCATATGTGTAAGACTTGTATGGTAA 59.286 37.037 17.29 0.00 37.46 2.85
104 105 9.261180 CCATATGTGTAAGACTTGTATGGTAAG 57.739 37.037 1.24 0.00 34.25 2.34
105 106 9.261180 CATATGTGTAAGACTTGTATGGTAAGG 57.739 37.037 0.00 0.00 0.00 2.69
106 107 5.484715 TGTGTAAGACTTGTATGGTAAGGC 58.515 41.667 0.00 0.00 33.25 4.35
107 108 5.012251 TGTGTAAGACTTGTATGGTAAGGCA 59.988 40.000 0.00 0.00 35.58 4.75
108 109 6.113411 GTGTAAGACTTGTATGGTAAGGCAT 58.887 40.000 0.00 0.00 35.58 4.40
109 110 6.037172 GTGTAAGACTTGTATGGTAAGGCATG 59.963 42.308 0.00 0.00 35.58 4.06
110 111 4.844349 AGACTTGTATGGTAAGGCATGT 57.156 40.909 0.00 0.00 35.58 3.21
111 112 5.950544 AGACTTGTATGGTAAGGCATGTA 57.049 39.130 0.00 0.00 35.58 2.29
112 113 6.500589 AGACTTGTATGGTAAGGCATGTAT 57.499 37.500 0.00 0.00 35.58 2.29
113 114 7.612065 AGACTTGTATGGTAAGGCATGTATA 57.388 36.000 0.00 0.00 35.58 1.47
114 115 7.671302 AGACTTGTATGGTAAGGCATGTATAG 58.329 38.462 0.00 0.00 35.58 1.31
115 116 7.290248 AGACTTGTATGGTAAGGCATGTATAGT 59.710 37.037 0.00 0.00 35.58 2.12
116 117 7.802117 ACTTGTATGGTAAGGCATGTATAGTT 58.198 34.615 0.00 0.00 0.00 2.24
117 118 8.930527 ACTTGTATGGTAAGGCATGTATAGTTA 58.069 33.333 0.00 0.00 0.00 2.24
118 119 9.424319 CTTGTATGGTAAGGCATGTATAGTTAG 57.576 37.037 0.00 0.00 0.00 2.34
119 120 8.486942 TGTATGGTAAGGCATGTATAGTTAGT 57.513 34.615 0.00 0.00 0.00 2.24
120 121 8.582437 TGTATGGTAAGGCATGTATAGTTAGTC 58.418 37.037 0.00 0.00 0.00 2.59
121 122 7.612065 ATGGTAAGGCATGTATAGTTAGTCA 57.388 36.000 0.00 0.00 0.00 3.41
122 123 6.812998 TGGTAAGGCATGTATAGTTAGTCAC 58.187 40.000 0.00 0.00 0.00 3.67
123 124 6.183360 TGGTAAGGCATGTATAGTTAGTCACC 60.183 42.308 0.00 0.00 0.00 4.02
124 125 4.585955 AGGCATGTATAGTTAGTCACCG 57.414 45.455 0.00 0.00 0.00 4.94
125 126 4.212716 AGGCATGTATAGTTAGTCACCGA 58.787 43.478 0.00 0.00 0.00 4.69
126 127 4.278669 AGGCATGTATAGTTAGTCACCGAG 59.721 45.833 0.00 0.00 0.00 4.63
127 128 3.982058 GCATGTATAGTTAGTCACCGAGC 59.018 47.826 0.00 0.00 0.00 5.03
128 129 4.547532 CATGTATAGTTAGTCACCGAGCC 58.452 47.826 0.00 0.00 0.00 4.70
129 130 2.615447 TGTATAGTTAGTCACCGAGCCG 59.385 50.000 0.00 0.00 0.00 5.52
140 141 3.993103 CGAGCCGGACACGTTATC 58.007 61.111 5.05 0.00 38.78 1.75
141 142 1.432251 CGAGCCGGACACGTTATCT 59.568 57.895 5.05 0.00 38.78 1.98
142 143 0.659427 CGAGCCGGACACGTTATCTA 59.341 55.000 5.05 0.00 38.78 1.98
143 144 1.266175 CGAGCCGGACACGTTATCTAT 59.734 52.381 5.05 0.00 38.78 1.98
144 145 2.662700 GAGCCGGACACGTTATCTATG 58.337 52.381 5.05 0.00 38.78 2.23
145 146 2.292569 GAGCCGGACACGTTATCTATGA 59.707 50.000 5.05 0.00 38.78 2.15
146 147 2.293677 AGCCGGACACGTTATCTATGAG 59.706 50.000 5.05 0.00 38.78 2.90
147 148 2.034305 GCCGGACACGTTATCTATGAGT 59.966 50.000 5.05 0.00 38.78 3.41
148 149 3.852572 GCCGGACACGTTATCTATGAGTC 60.853 52.174 5.05 0.00 38.78 3.36
149 150 3.542690 CGGACACGTTATCTATGAGTCG 58.457 50.000 0.00 0.00 35.09 4.18
150 151 3.606384 CGGACACGTTATCTATGAGTCGG 60.606 52.174 0.00 0.00 35.09 4.79
151 152 3.298317 GACACGTTATCTATGAGTCGGC 58.702 50.000 0.00 0.00 0.00 5.54
152 153 2.034305 ACACGTTATCTATGAGTCGGCC 59.966 50.000 0.00 0.00 0.00 6.13
153 154 1.266175 ACGTTATCTATGAGTCGGCCG 59.734 52.381 22.12 22.12 0.00 6.13
154 155 1.401148 CGTTATCTATGAGTCGGCCGG 60.401 57.143 27.83 7.21 0.00 6.13
155 156 1.067776 GTTATCTATGAGTCGGCCGGG 60.068 57.143 27.83 7.12 0.00 5.73
156 157 0.402887 TATCTATGAGTCGGCCGGGA 59.597 55.000 27.83 3.06 0.00 5.14
157 158 1.179814 ATCTATGAGTCGGCCGGGAC 61.180 60.000 27.83 17.75 37.19 4.46
159 160 1.380785 TATGAGTCGGCCGGGACTT 60.381 57.895 27.83 15.94 46.85 3.01
160 161 1.389609 TATGAGTCGGCCGGGACTTC 61.390 60.000 27.83 15.60 46.85 3.01
161 162 4.493747 GAGTCGGCCGGGACTTCG 62.494 72.222 27.83 0.00 46.85 3.79
165 166 4.796231 CGGCCGGGACTTCGTGAG 62.796 72.222 20.10 0.00 0.00 3.51
168 169 4.796231 CCGGGACTTCGTGAGCCG 62.796 72.222 0.00 0.00 32.66 5.52
170 171 4.070552 GGGACTTCGTGAGCCGCT 62.071 66.667 0.00 0.00 36.19 5.52
171 172 2.811317 GGACTTCGTGAGCCGCTG 60.811 66.667 0.00 0.00 36.19 5.18
172 173 2.811317 GACTTCGTGAGCCGCTGG 60.811 66.667 0.00 0.00 36.19 4.85
173 174 4.379243 ACTTCGTGAGCCGCTGGG 62.379 66.667 0.00 0.00 36.19 4.45
183 184 3.136123 CCGCTGGGCATCAACCTG 61.136 66.667 0.00 0.00 0.00 4.00
184 185 2.360350 CGCTGGGCATCAACCTGT 60.360 61.111 0.00 0.00 0.00 4.00
185 186 2.693762 CGCTGGGCATCAACCTGTG 61.694 63.158 0.00 0.00 0.00 3.66
186 187 1.604593 GCTGGGCATCAACCTGTGT 60.605 57.895 0.00 0.00 0.00 3.72
187 188 0.322456 GCTGGGCATCAACCTGTGTA 60.322 55.000 0.00 0.00 0.00 2.90
188 189 1.683011 GCTGGGCATCAACCTGTGTAT 60.683 52.381 0.00 0.00 0.00 2.29
189 190 2.421388 GCTGGGCATCAACCTGTGTATA 60.421 50.000 0.00 0.00 0.00 1.47
190 191 3.748668 GCTGGGCATCAACCTGTGTATAT 60.749 47.826 0.00 0.00 0.00 0.86
191 192 4.504864 GCTGGGCATCAACCTGTGTATATA 60.505 45.833 0.00 0.00 0.00 0.86
192 193 5.620206 CTGGGCATCAACCTGTGTATATAA 58.380 41.667 0.00 0.00 0.00 0.98
193 194 6.007485 TGGGCATCAACCTGTGTATATAAA 57.993 37.500 0.00 0.00 0.00 1.40
194 195 6.061441 TGGGCATCAACCTGTGTATATAAAG 58.939 40.000 0.00 0.00 0.00 1.85
195 196 5.473504 GGGCATCAACCTGTGTATATAAAGG 59.526 44.000 4.18 4.18 35.82 3.11
196 197 5.473504 GGCATCAACCTGTGTATATAAAGGG 59.526 44.000 10.28 0.00 33.87 3.95
197 198 6.296026 GCATCAACCTGTGTATATAAAGGGA 58.704 40.000 10.28 0.00 33.87 4.20
198 199 6.204882 GCATCAACCTGTGTATATAAAGGGAC 59.795 42.308 10.28 0.00 33.87 4.46
199 200 5.909477 TCAACCTGTGTATATAAAGGGACG 58.091 41.667 10.28 0.00 33.87 4.79
200 201 5.657745 TCAACCTGTGTATATAAAGGGACGA 59.342 40.000 10.28 1.26 33.87 4.20
201 202 5.526506 ACCTGTGTATATAAAGGGACGAC 57.473 43.478 10.28 0.00 33.87 4.34
202 203 4.343239 ACCTGTGTATATAAAGGGACGACC 59.657 45.833 10.28 0.00 40.67 4.79
223 224 4.697756 CGGCGGTTCAGGGCAAGA 62.698 66.667 0.00 0.00 0.00 3.02
224 225 2.282180 GGCGGTTCAGGGCAAGAA 60.282 61.111 0.00 0.00 0.00 2.52
225 226 1.901464 GGCGGTTCAGGGCAAGAAA 60.901 57.895 0.00 0.00 0.00 2.52
226 227 1.285950 GCGGTTCAGGGCAAGAAAC 59.714 57.895 0.00 0.00 0.00 2.78
227 228 1.452145 GCGGTTCAGGGCAAGAAACA 61.452 55.000 6.94 0.00 32.26 2.83
228 229 1.028905 CGGTTCAGGGCAAGAAACAA 58.971 50.000 6.94 0.00 32.26 2.83
229 230 1.001378 CGGTTCAGGGCAAGAAACAAG 60.001 52.381 6.94 0.00 32.26 3.16
230 231 2.306847 GGTTCAGGGCAAGAAACAAGA 58.693 47.619 1.87 0.00 32.98 3.02
231 232 2.294512 GGTTCAGGGCAAGAAACAAGAG 59.705 50.000 1.87 0.00 32.98 2.85
232 233 3.214328 GTTCAGGGCAAGAAACAAGAGA 58.786 45.455 0.00 0.00 0.00 3.10
233 234 3.795688 TCAGGGCAAGAAACAAGAGAT 57.204 42.857 0.00 0.00 0.00 2.75
234 235 4.104383 TCAGGGCAAGAAACAAGAGATT 57.896 40.909 0.00 0.00 0.00 2.40
235 236 3.822735 TCAGGGCAAGAAACAAGAGATTG 59.177 43.478 0.00 0.00 0.00 2.67
236 237 3.822735 CAGGGCAAGAAACAAGAGATTGA 59.177 43.478 0.00 0.00 0.00 2.57
237 238 4.279169 CAGGGCAAGAAACAAGAGATTGAA 59.721 41.667 0.00 0.00 0.00 2.69
238 239 4.895297 AGGGCAAGAAACAAGAGATTGAAA 59.105 37.500 0.00 0.00 0.00 2.69
239 240 5.363580 AGGGCAAGAAACAAGAGATTGAAAA 59.636 36.000 0.00 0.00 0.00 2.29
240 241 5.463392 GGGCAAGAAACAAGAGATTGAAAAC 59.537 40.000 0.00 0.00 0.00 2.43
241 242 6.276091 GGCAAGAAACAAGAGATTGAAAACT 58.724 36.000 0.00 0.00 0.00 2.66
242 243 7.425606 GGCAAGAAACAAGAGATTGAAAACTA 58.574 34.615 0.00 0.00 0.00 2.24
243 244 7.592903 GGCAAGAAACAAGAGATTGAAAACTAG 59.407 37.037 0.00 0.00 0.00 2.57
244 245 8.345565 GCAAGAAACAAGAGATTGAAAACTAGA 58.654 33.333 0.00 0.00 0.00 2.43
247 248 9.784531 AGAAACAAGAGATTGAAAACTAGATCA 57.215 29.630 0.00 0.00 0.00 2.92
250 251 9.784531 AACAAGAGATTGAAAACTAGATCAAGA 57.215 29.630 0.00 0.00 38.80 3.02
251 252 9.784531 ACAAGAGATTGAAAACTAGATCAAGAA 57.215 29.630 0.00 0.00 38.80 2.52
257 258 9.913451 GATTGAAAACTAGATCAAGAAGATTCG 57.087 33.333 0.00 0.00 38.80 3.34
258 259 7.295952 TGAAAACTAGATCAAGAAGATTCGC 57.704 36.000 0.00 0.00 37.00 4.70
259 260 7.099764 TGAAAACTAGATCAAGAAGATTCGCT 58.900 34.615 0.00 0.00 37.00 4.93
260 261 7.276658 TGAAAACTAGATCAAGAAGATTCGCTC 59.723 37.037 0.00 0.00 37.00 5.03
261 262 5.195001 ACTAGATCAAGAAGATTCGCTCC 57.805 43.478 0.00 0.00 37.00 4.70
262 263 3.467374 AGATCAAGAAGATTCGCTCCC 57.533 47.619 0.00 0.00 37.00 4.30
263 264 3.037549 AGATCAAGAAGATTCGCTCCCT 58.962 45.455 0.00 0.00 37.00 4.20
264 265 2.680312 TCAAGAAGATTCGCTCCCTG 57.320 50.000 0.00 0.00 0.00 4.45
265 266 1.012841 CAAGAAGATTCGCTCCCTGC 58.987 55.000 0.00 0.00 38.57 4.85
266 267 0.908198 AAGAAGATTCGCTCCCTGCT 59.092 50.000 0.00 0.00 40.11 4.24
267 268 1.781786 AGAAGATTCGCTCCCTGCTA 58.218 50.000 0.00 0.00 40.11 3.49
268 269 2.111384 AGAAGATTCGCTCCCTGCTAA 58.889 47.619 0.00 0.00 40.11 3.09
269 270 2.703007 AGAAGATTCGCTCCCTGCTAAT 59.297 45.455 0.00 0.00 39.36 1.73
271 272 1.423395 GATTCGCTCCCTGCTAATCG 58.577 55.000 0.00 0.00 41.67 3.34
272 273 1.000163 GATTCGCTCCCTGCTAATCGA 60.000 52.381 0.00 0.00 41.67 3.59
273 274 0.385751 TTCGCTCCCTGCTAATCGAG 59.614 55.000 0.00 0.00 40.11 4.04
274 275 0.465642 TCGCTCCCTGCTAATCGAGA 60.466 55.000 0.00 0.00 40.11 4.04
275 276 0.318275 CGCTCCCTGCTAATCGAGAC 60.318 60.000 0.00 0.00 40.11 3.36
276 277 0.747255 GCTCCCTGCTAATCGAGACA 59.253 55.000 0.00 0.00 38.95 3.41
277 278 1.342819 GCTCCCTGCTAATCGAGACAT 59.657 52.381 0.00 0.00 38.95 3.06
278 279 2.558795 GCTCCCTGCTAATCGAGACATA 59.441 50.000 0.00 0.00 38.95 2.29
279 280 3.005897 GCTCCCTGCTAATCGAGACATAA 59.994 47.826 0.00 0.00 38.95 1.90
280 281 4.804108 CTCCCTGCTAATCGAGACATAAG 58.196 47.826 0.00 0.00 0.00 1.73
281 282 3.005897 TCCCTGCTAATCGAGACATAAGC 59.994 47.826 0.00 0.00 0.00 3.09
282 283 3.243873 CCCTGCTAATCGAGACATAAGCA 60.244 47.826 0.00 0.00 37.62 3.91
283 284 4.371786 CCTGCTAATCGAGACATAAGCAA 58.628 43.478 0.00 0.00 39.29 3.91
284 285 4.993584 CCTGCTAATCGAGACATAAGCAAT 59.006 41.667 0.00 0.00 39.29 3.56
285 286 6.159293 CCTGCTAATCGAGACATAAGCAATA 58.841 40.000 0.00 0.00 39.29 1.90
286 287 6.090088 CCTGCTAATCGAGACATAAGCAATAC 59.910 42.308 0.00 0.00 39.29 1.89
287 288 5.926542 TGCTAATCGAGACATAAGCAATACC 59.073 40.000 0.00 0.00 37.05 2.73
288 289 5.926542 GCTAATCGAGACATAAGCAATACCA 59.073 40.000 0.00 0.00 0.00 3.25
289 290 6.128795 GCTAATCGAGACATAAGCAATACCAC 60.129 42.308 0.00 0.00 0.00 4.16
290 291 4.054780 TCGAGACATAAGCAATACCACC 57.945 45.455 0.00 0.00 0.00 4.61
291 292 3.704566 TCGAGACATAAGCAATACCACCT 59.295 43.478 0.00 0.00 0.00 4.00
292 293 4.051922 CGAGACATAAGCAATACCACCTC 58.948 47.826 0.00 0.00 0.00 3.85
293 294 4.441495 CGAGACATAAGCAATACCACCTCA 60.441 45.833 0.00 0.00 0.00 3.86
294 295 5.428253 GAGACATAAGCAATACCACCTCAA 58.572 41.667 0.00 0.00 0.00 3.02
295 296 5.815581 AGACATAAGCAATACCACCTCAAA 58.184 37.500 0.00 0.00 0.00 2.69
296 297 5.648092 AGACATAAGCAATACCACCTCAAAC 59.352 40.000 0.00 0.00 0.00 2.93
297 298 5.570320 ACATAAGCAATACCACCTCAAACT 58.430 37.500 0.00 0.00 0.00 2.66
298 299 5.415701 ACATAAGCAATACCACCTCAAACTG 59.584 40.000 0.00 0.00 0.00 3.16
299 300 2.795329 AGCAATACCACCTCAAACTGG 58.205 47.619 0.00 0.00 0.00 4.00
300 301 2.375174 AGCAATACCACCTCAAACTGGA 59.625 45.455 0.00 0.00 0.00 3.86
301 302 3.010584 AGCAATACCACCTCAAACTGGAT 59.989 43.478 0.00 0.00 0.00 3.41
302 303 3.763897 GCAATACCACCTCAAACTGGATT 59.236 43.478 0.00 0.00 0.00 3.01
303 304 4.947388 GCAATACCACCTCAAACTGGATTA 59.053 41.667 0.00 0.00 0.00 1.75
304 305 5.066505 GCAATACCACCTCAAACTGGATTAG 59.933 44.000 0.00 0.00 0.00 1.73
305 306 3.721087 ACCACCTCAAACTGGATTAGG 57.279 47.619 0.00 0.00 0.00 2.69
306 307 2.290960 ACCACCTCAAACTGGATTAGGC 60.291 50.000 0.00 0.00 0.00 3.93
307 308 2.369394 CACCTCAAACTGGATTAGGCC 58.631 52.381 0.00 0.00 0.00 5.19
308 309 2.025887 CACCTCAAACTGGATTAGGCCT 60.026 50.000 11.78 11.78 0.00 5.19
309 310 2.649816 ACCTCAAACTGGATTAGGCCTT 59.350 45.455 12.58 0.00 0.00 4.35
310 311 3.076032 ACCTCAAACTGGATTAGGCCTTT 59.924 43.478 12.58 0.00 0.00 3.11
311 312 4.089361 CCTCAAACTGGATTAGGCCTTTT 58.911 43.478 12.58 0.00 0.00 2.27
312 313 5.222254 ACCTCAAACTGGATTAGGCCTTTTA 60.222 40.000 12.58 0.00 0.00 1.52
313 314 5.125578 CCTCAAACTGGATTAGGCCTTTTAC 59.874 44.000 12.58 0.00 0.00 2.01
314 315 5.014202 TCAAACTGGATTAGGCCTTTTACC 58.986 41.667 12.58 10.79 0.00 2.85
315 316 4.948062 AACTGGATTAGGCCTTTTACCT 57.052 40.909 12.58 0.00 41.57 3.08
316 317 4.948062 ACTGGATTAGGCCTTTTACCTT 57.052 40.909 12.58 0.00 38.81 3.50
317 318 4.856509 ACTGGATTAGGCCTTTTACCTTC 58.143 43.478 12.58 0.00 38.81 3.46
318 319 4.291249 ACTGGATTAGGCCTTTTACCTTCA 59.709 41.667 12.58 0.00 38.81 3.02
319 320 4.595986 TGGATTAGGCCTTTTACCTTCAC 58.404 43.478 12.58 0.00 38.81 3.18
320 321 3.952323 GGATTAGGCCTTTTACCTTCACC 59.048 47.826 12.58 0.00 38.81 4.02
321 322 2.773993 TAGGCCTTTTACCTTCACCG 57.226 50.000 12.58 0.00 38.81 4.94
322 323 0.608308 AGGCCTTTTACCTTCACCGC 60.608 55.000 0.00 0.00 31.87 5.68
323 324 0.891904 GGCCTTTTACCTTCACCGCA 60.892 55.000 0.00 0.00 0.00 5.69
324 325 0.955905 GCCTTTTACCTTCACCGCAA 59.044 50.000 0.00 0.00 0.00 4.85
325 326 1.068541 GCCTTTTACCTTCACCGCAAG 60.069 52.381 0.00 0.00 0.00 4.01
338 339 4.660938 GCAAGGGGCCGAACCAGT 62.661 66.667 0.00 0.00 42.05 4.00
339 340 3.074281 CAAGGGGCCGAACCAGTA 58.926 61.111 0.00 0.00 42.05 2.74
340 341 1.607612 CAAGGGGCCGAACCAGTAT 59.392 57.895 0.00 0.00 42.05 2.12
341 342 0.834612 CAAGGGGCCGAACCAGTATA 59.165 55.000 0.00 0.00 42.05 1.47
342 343 1.210967 CAAGGGGCCGAACCAGTATAA 59.789 52.381 0.00 0.00 42.05 0.98
343 344 1.587066 AGGGGCCGAACCAGTATAAA 58.413 50.000 0.00 0.00 42.05 1.40
344 345 1.211212 AGGGGCCGAACCAGTATAAAC 59.789 52.381 0.00 0.00 42.05 2.01
345 346 1.211212 GGGGCCGAACCAGTATAAACT 59.789 52.381 0.00 0.00 42.05 2.66
346 347 2.558378 GGGCCGAACCAGTATAAACTC 58.442 52.381 0.00 0.00 42.05 3.01
347 348 2.558378 GGCCGAACCAGTATAAACTCC 58.442 52.381 0.00 0.00 38.86 3.85
348 349 2.169978 GGCCGAACCAGTATAAACTCCT 59.830 50.000 0.00 0.00 38.86 3.69
349 350 3.195661 GCCGAACCAGTATAAACTCCTG 58.804 50.000 0.00 0.00 31.97 3.86
350 351 3.369157 GCCGAACCAGTATAAACTCCTGT 60.369 47.826 0.00 0.00 31.97 4.00
351 352 4.181578 CCGAACCAGTATAAACTCCTGTG 58.818 47.826 0.00 0.00 31.97 3.66
352 353 4.322499 CCGAACCAGTATAAACTCCTGTGT 60.322 45.833 0.00 0.00 31.97 3.72
353 354 4.863131 CGAACCAGTATAAACTCCTGTGTC 59.137 45.833 0.00 0.00 31.97 3.67
354 355 4.820894 ACCAGTATAAACTCCTGTGTCC 57.179 45.455 0.00 0.00 31.97 4.02
355 356 4.426704 ACCAGTATAAACTCCTGTGTCCT 58.573 43.478 0.00 0.00 31.97 3.85
356 357 4.844655 ACCAGTATAAACTCCTGTGTCCTT 59.155 41.667 0.00 0.00 31.97 3.36
357 358 5.309806 ACCAGTATAAACTCCTGTGTCCTTT 59.690 40.000 0.00 0.00 31.97 3.11
358 359 5.643777 CCAGTATAAACTCCTGTGTCCTTTG 59.356 44.000 0.00 0.00 31.97 2.77
359 360 6.231211 CAGTATAAACTCCTGTGTCCTTTGT 58.769 40.000 0.00 0.00 31.97 2.83
360 361 6.369065 CAGTATAAACTCCTGTGTCCTTTGTC 59.631 42.308 0.00 0.00 31.97 3.18
361 362 2.640316 AACTCCTGTGTCCTTTGTCC 57.360 50.000 0.00 0.00 0.00 4.02
362 363 0.765510 ACTCCTGTGTCCTTTGTCCC 59.234 55.000 0.00 0.00 0.00 4.46
363 364 0.320771 CTCCTGTGTCCTTTGTCCCG 60.321 60.000 0.00 0.00 0.00 5.14
364 365 1.052124 TCCTGTGTCCTTTGTCCCGT 61.052 55.000 0.00 0.00 0.00 5.28
365 366 0.179029 CCTGTGTCCTTTGTCCCGTT 60.179 55.000 0.00 0.00 0.00 4.44
366 367 1.675552 CTGTGTCCTTTGTCCCGTTT 58.324 50.000 0.00 0.00 0.00 3.60
367 368 2.485835 CCTGTGTCCTTTGTCCCGTTTA 60.486 50.000 0.00 0.00 0.00 2.01
368 369 3.207778 CTGTGTCCTTTGTCCCGTTTAA 58.792 45.455 0.00 0.00 0.00 1.52
369 370 2.944349 TGTGTCCTTTGTCCCGTTTAAC 59.056 45.455 0.00 0.00 0.00 2.01
370 371 2.291465 GTGTCCTTTGTCCCGTTTAACC 59.709 50.000 0.00 0.00 0.00 2.85
371 372 1.881973 GTCCTTTGTCCCGTTTAACCC 59.118 52.381 0.00 0.00 0.00 4.11
372 373 1.202915 TCCTTTGTCCCGTTTAACCCC 60.203 52.381 0.00 0.00 0.00 4.95
373 374 1.250328 CTTTGTCCCGTTTAACCCCC 58.750 55.000 0.00 0.00 0.00 5.40
374 375 0.852155 TTTGTCCCGTTTAACCCCCT 59.148 50.000 0.00 0.00 0.00 4.79
375 376 0.852155 TTGTCCCGTTTAACCCCCTT 59.148 50.000 0.00 0.00 0.00 3.95
376 377 1.739750 TGTCCCGTTTAACCCCCTTA 58.260 50.000 0.00 0.00 0.00 2.69
377 378 2.061061 TGTCCCGTTTAACCCCCTTAA 58.939 47.619 0.00 0.00 0.00 1.85
378 379 2.040145 TGTCCCGTTTAACCCCCTTAAG 59.960 50.000 0.00 0.00 0.00 1.85
379 380 1.004628 TCCCGTTTAACCCCCTTAAGC 59.995 52.381 0.00 0.00 0.00 3.09
380 381 1.005097 CCCGTTTAACCCCCTTAAGCT 59.995 52.381 0.00 0.00 0.00 3.74
381 382 2.239402 CCCGTTTAACCCCCTTAAGCTA 59.761 50.000 0.00 0.00 0.00 3.32
382 383 3.308331 CCCGTTTAACCCCCTTAAGCTAA 60.308 47.826 0.00 0.00 0.00 3.09
383 384 3.691118 CCGTTTAACCCCCTTAAGCTAAC 59.309 47.826 0.00 0.00 0.00 2.34
384 385 3.691118 CGTTTAACCCCCTTAAGCTAACC 59.309 47.826 0.00 0.00 0.00 2.85
385 386 4.566278 CGTTTAACCCCCTTAAGCTAACCT 60.566 45.833 0.00 0.00 0.00 3.50
386 387 5.338300 CGTTTAACCCCCTTAAGCTAACCTA 60.338 44.000 0.00 0.00 0.00 3.08
387 388 5.963214 TTAACCCCCTTAAGCTAACCTAG 57.037 43.478 0.00 0.00 0.00 3.02
388 389 3.503773 ACCCCCTTAAGCTAACCTAGT 57.496 47.619 0.00 0.00 0.00 2.57
389 390 3.811842 ACCCCCTTAAGCTAACCTAGTT 58.188 45.455 0.00 0.00 0.00 2.24
390 391 3.522343 ACCCCCTTAAGCTAACCTAGTTG 59.478 47.826 0.00 0.00 0.00 3.16
391 392 3.542648 CCCCTTAAGCTAACCTAGTTGC 58.457 50.000 0.00 0.00 0.00 4.17
392 393 3.195661 CCCTTAAGCTAACCTAGTTGCG 58.804 50.000 0.00 0.00 0.00 4.85
393 394 3.118884 CCCTTAAGCTAACCTAGTTGCGA 60.119 47.826 0.00 0.00 0.00 5.10
394 395 4.443034 CCCTTAAGCTAACCTAGTTGCGAT 60.443 45.833 0.00 0.00 0.00 4.58
395 396 4.508124 CCTTAAGCTAACCTAGTTGCGATG 59.492 45.833 0.00 0.00 0.00 3.84
396 397 3.887621 AAGCTAACCTAGTTGCGATGA 57.112 42.857 0.00 0.00 0.00 2.92
397 398 4.408182 AAGCTAACCTAGTTGCGATGAT 57.592 40.909 0.00 0.00 0.00 2.45
398 399 4.408182 AGCTAACCTAGTTGCGATGATT 57.592 40.909 0.00 0.00 0.00 2.57
399 400 4.770795 AGCTAACCTAGTTGCGATGATTT 58.229 39.130 0.00 0.00 0.00 2.17
400 401 4.811557 AGCTAACCTAGTTGCGATGATTTC 59.188 41.667 0.00 0.00 0.00 2.17
401 402 4.570772 GCTAACCTAGTTGCGATGATTTCA 59.429 41.667 0.00 0.00 0.00 2.69
402 403 4.946784 AACCTAGTTGCGATGATTTCAC 57.053 40.909 0.00 0.00 0.00 3.18
403 404 4.207891 ACCTAGTTGCGATGATTTCACT 57.792 40.909 0.00 0.00 0.00 3.41
404 405 5.339008 ACCTAGTTGCGATGATTTCACTA 57.661 39.130 0.00 0.00 0.00 2.74
405 406 5.109903 ACCTAGTTGCGATGATTTCACTAC 58.890 41.667 0.00 0.00 0.00 2.73
406 407 5.105310 ACCTAGTTGCGATGATTTCACTACT 60.105 40.000 0.00 0.00 0.00 2.57
407 408 6.096423 ACCTAGTTGCGATGATTTCACTACTA 59.904 38.462 0.00 0.00 0.00 1.82
408 409 6.978659 CCTAGTTGCGATGATTTCACTACTAA 59.021 38.462 0.00 0.00 28.81 2.24
409 410 6.893958 AGTTGCGATGATTTCACTACTAAG 57.106 37.500 0.00 0.00 0.00 2.18
410 411 6.398918 AGTTGCGATGATTTCACTACTAAGT 58.601 36.000 0.00 0.00 35.91 2.24
411 412 6.531948 AGTTGCGATGATTTCACTACTAAGTC 59.468 38.462 0.00 0.00 31.97 3.01
412 413 5.348986 TGCGATGATTTCACTACTAAGTCC 58.651 41.667 0.00 0.00 31.97 3.85
413 414 5.127194 TGCGATGATTTCACTACTAAGTCCT 59.873 40.000 0.00 0.00 31.97 3.85
414 415 6.043411 GCGATGATTTCACTACTAAGTCCTT 58.957 40.000 0.00 0.00 31.97 3.36
415 416 7.147966 TGCGATGATTTCACTACTAAGTCCTTA 60.148 37.037 0.00 0.00 31.97 2.69
416 417 7.167801 GCGATGATTTCACTACTAAGTCCTTAC 59.832 40.741 0.00 0.00 31.97 2.34
417 418 7.376336 CGATGATTTCACTACTAAGTCCTTACG 59.624 40.741 0.00 0.00 31.97 3.18
418 419 6.327934 TGATTTCACTACTAAGTCCTTACGC 58.672 40.000 0.00 0.00 31.97 4.42
419 420 5.972107 TTTCACTACTAAGTCCTTACGCT 57.028 39.130 0.00 0.00 31.97 5.07
420 421 7.337689 TGATTTCACTACTAAGTCCTTACGCTA 59.662 37.037 0.00 0.00 31.97 4.26
421 422 6.674694 TTCACTACTAAGTCCTTACGCTAG 57.325 41.667 0.00 0.00 31.97 3.42
422 423 5.121811 TCACTACTAAGTCCTTACGCTAGG 58.878 45.833 0.00 0.00 31.97 3.02
423 424 5.104776 TCACTACTAAGTCCTTACGCTAGGA 60.105 44.000 2.14 2.14 42.02 2.94
430 431 1.681793 TCCTTACGCTAGGACATCTGC 59.318 52.381 2.14 0.00 39.40 4.26
431 432 1.269831 CCTTACGCTAGGACATCTGCC 60.270 57.143 0.00 0.00 37.50 4.85
432 433 0.384309 TTACGCTAGGACATCTGCCG 59.616 55.000 0.00 0.00 0.00 5.69
433 434 0.750546 TACGCTAGGACATCTGCCGT 60.751 55.000 0.00 0.00 37.33 5.68
434 435 0.750546 ACGCTAGGACATCTGCCGTA 60.751 55.000 0.00 0.00 33.81 4.02
435 436 0.384309 CGCTAGGACATCTGCCGTAA 59.616 55.000 0.00 0.00 0.00 3.18
436 437 1.854227 GCTAGGACATCTGCCGTAAC 58.146 55.000 0.00 0.00 0.00 2.50
437 438 1.409427 GCTAGGACATCTGCCGTAACT 59.591 52.381 0.00 0.00 0.00 2.24
438 439 2.621998 GCTAGGACATCTGCCGTAACTA 59.378 50.000 0.00 0.00 0.00 2.24
439 440 3.256136 GCTAGGACATCTGCCGTAACTAT 59.744 47.826 0.00 0.00 0.00 2.12
440 441 4.262079 GCTAGGACATCTGCCGTAACTATT 60.262 45.833 0.00 0.00 0.00 1.73
441 442 4.323553 AGGACATCTGCCGTAACTATTC 57.676 45.455 0.00 0.00 0.00 1.75
442 443 3.069729 AGGACATCTGCCGTAACTATTCC 59.930 47.826 0.00 0.00 0.00 3.01
443 444 3.181469 GGACATCTGCCGTAACTATTCCA 60.181 47.826 0.00 0.00 0.00 3.53
444 445 4.503296 GGACATCTGCCGTAACTATTCCAT 60.503 45.833 0.00 0.00 0.00 3.41
445 446 4.380531 ACATCTGCCGTAACTATTCCATG 58.619 43.478 0.00 0.00 0.00 3.66
446 447 4.100963 ACATCTGCCGTAACTATTCCATGA 59.899 41.667 0.00 0.00 0.00 3.07
447 448 4.054780 TCTGCCGTAACTATTCCATGAC 57.945 45.455 0.00 0.00 0.00 3.06
448 449 3.449377 TCTGCCGTAACTATTCCATGACA 59.551 43.478 0.00 0.00 0.00 3.58
455 456 6.183360 CCGTAACTATTCCATGACAATTTGCT 60.183 38.462 0.00 0.00 0.00 3.91
568 569 8.045176 TCGAGTCGAATATATGAAGTCATCAT 57.955 34.615 13.98 0.00 41.59 2.45
593 594 3.700038 AGCTTTCACCTACTAGCACGTAT 59.300 43.478 0.00 0.00 36.11 3.06
642 647 5.242838 TCTTAAAAACAGCCGGATGATTTGT 59.757 36.000 29.47 19.04 0.00 2.83
646 651 0.734889 CAGCCGGATGATTTGTGGAC 59.265 55.000 16.48 0.00 0.00 4.02
662 667 0.179084 GGACGAAATCATCCGCCTCA 60.179 55.000 0.00 0.00 0.00 3.86
681 686 2.664851 CCGCTTGCCACGTCTTGA 60.665 61.111 0.00 0.00 0.00 3.02
690 695 0.673644 CCACGTCTTGATGGGACCAC 60.674 60.000 0.00 0.00 31.83 4.16
700 726 0.104304 ATGGGACCACGCGTTATCTC 59.896 55.000 10.22 11.12 0.00 2.75
714 740 0.968901 TATCTCCAGGTCCAACGCGT 60.969 55.000 5.58 5.58 0.00 6.01
724 750 4.354212 CAACGCGTGTGCCACTCG 62.354 66.667 14.98 14.44 46.07 4.18
774 800 6.527423 AGAGTACAAGTTTTATCCGGTTTCA 58.473 36.000 0.00 0.00 0.00 2.69
785 811 7.556733 TTTATCCGGTTTCATGTGGTAATAC 57.443 36.000 0.00 0.00 0.00 1.89
857 883 1.915614 CTCATGCCAACACGCAGGAC 61.916 60.000 0.00 0.00 44.01 3.85
859 885 3.196207 ATGCCAACACGCAGGACCT 62.196 57.895 0.00 0.00 43.26 3.85
864 890 0.737715 CAACACGCAGGACCTAGCTC 60.738 60.000 12.27 0.00 0.00 4.09
866 892 2.055042 CACGCAGGACCTAGCTCCT 61.055 63.158 0.24 0.24 41.84 3.69
992 1028 4.771684 CGTCTACGTAACGGTGGG 57.228 61.111 17.09 0.00 36.51 4.61
993 1029 1.137404 CGTCTACGTAACGGTGGGG 59.863 63.158 17.09 0.00 36.51 4.96
1242 1287 1.538512 CACATCACCAGCAACCTTGAG 59.461 52.381 0.00 0.00 0.00 3.02
1271 1316 0.730494 GACAACCGGTTAGACGTCCG 60.730 60.000 21.79 9.36 45.42 4.79
1327 1372 0.179009 CCACGGCTGGATGGATGAAT 60.179 55.000 0.00 0.00 40.55 2.57
1347 1392 2.341846 TCAGGGTCAAGGTTGTCAAC 57.658 50.000 7.20 7.20 0.00 3.18
1452 1500 2.273538 ACCGCTACCTCGTCTATGAT 57.726 50.000 0.00 0.00 0.00 2.45
1509 1571 0.591741 CTCGTATTCTCGCCGACACC 60.592 60.000 0.00 0.00 0.00 4.16
1570 1636 2.554893 GTCTTCTCGTCAAGGACAGACT 59.445 50.000 7.11 0.00 33.89 3.24
1610 1682 4.742201 TCGAGAAGGTGCTGCCGC 62.742 66.667 0.00 0.00 43.70 6.53
1642 1717 3.762288 TGACGATGTAAACTCCTGTAGCT 59.238 43.478 0.00 0.00 0.00 3.32
1761 1839 8.932945 ATGTATGTAATGTGTTACTCTCACAG 57.067 34.615 5.11 0.00 46.54 3.66
1762 1840 7.892609 TGTATGTAATGTGTTACTCTCACAGT 58.107 34.615 5.11 4.85 46.54 3.55
1983 2082 6.588756 CGAGTGACAAGTACCAGCTAATTAAA 59.411 38.462 0.00 0.00 0.00 1.52
2002 2101 4.499037 AAATTGCCAAAAGGACGAGTAC 57.501 40.909 0.00 0.00 0.00 2.73
2010 2109 2.915738 AAGGACGAGTACGATCACAC 57.084 50.000 0.00 0.00 42.66 3.82
2119 2218 1.459348 TGTGGTCTGGCAGACTGGA 60.459 57.895 38.04 23.64 44.46 3.86
2355 2457 7.752239 CCTAAAAAGTGTGATGCTTACATTGAG 59.248 37.037 0.00 0.00 36.35 3.02
2523 2625 4.039124 TCAATGGAAGAGGTTTCTTTTGCC 59.961 41.667 0.00 0.00 43.63 4.52
2564 2666 2.224523 TGGACTTACCTGGAAGCAACTG 60.225 50.000 0.00 0.00 39.86 3.16
2599 2701 9.405587 CATGTGGTTGAAGTATTTCGTTTTTAT 57.594 29.630 0.00 0.00 36.04 1.40
2600 2702 9.974980 ATGTGGTTGAAGTATTTCGTTTTTATT 57.025 25.926 0.00 0.00 36.04 1.40
2705 2807 1.006832 GCGGTGCTCGTATGTGATTT 58.993 50.000 2.43 0.00 41.72 2.17
2787 2889 4.271049 CCGTGCATCTTTTCTACATACCTG 59.729 45.833 0.00 0.00 0.00 4.00
2839 2942 5.173664 GTCTATGCACCGTTTTTAGGTAGT 58.826 41.667 0.00 0.00 40.59 2.73
2919 3023 2.484241 GCCCACCGTACTCCGATAAATT 60.484 50.000 0.00 0.00 39.56 1.82
2943 3048 1.295423 GGCGTGTGTAGGTGTGGAT 59.705 57.895 0.00 0.00 0.00 3.41
2961 3068 6.019479 GTGTGGATCAAAAAGAGATAGTAGCG 60.019 42.308 0.00 0.00 0.00 4.26
2979 3088 2.494073 AGCGAATCGAGATCTTATCCCC 59.506 50.000 6.91 0.00 0.00 4.81
2994 3103 1.645710 TCCCCGAGCTTCTTCTTCTT 58.354 50.000 0.00 0.00 0.00 2.52
3009 3118 2.040412 TCTTCTTCAAGCTTTCCTCCCC 59.960 50.000 0.00 0.00 0.00 4.81
3019 3134 2.687014 GCTTTCCTCCCCCTGTAATTCC 60.687 54.545 0.00 0.00 0.00 3.01
3048 3185 7.214381 TGTAATTCTCTTCGAAACCTTGAGAA 58.786 34.615 21.80 21.80 44.43 2.87
3053 3190 6.622549 TCTCTTCGAAACCTTGAGAATCTAC 58.377 40.000 10.62 0.00 34.92 2.59
3068 3205 0.538057 TCTACGAACCACACCCTCGT 60.538 55.000 1.72 1.72 46.72 4.18
3341 3485 1.222766 CGGAGATGCAGCAGCTGATC 61.223 60.000 27.39 22.46 42.74 2.92
3538 3682 1.428448 CTTCTCATCGCCAACAACGA 58.572 50.000 0.00 0.00 44.75 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 2.146342 GAACCGCCATGTATCCTCATG 58.854 52.381 0.00 0.00 43.14 3.07
5 6 1.768275 TGAACCGCCATGTATCCTCAT 59.232 47.619 0.00 0.00 0.00 2.90
6 7 1.134521 GTGAACCGCCATGTATCCTCA 60.135 52.381 0.00 0.00 0.00 3.86
7 8 1.134521 TGTGAACCGCCATGTATCCTC 60.135 52.381 0.00 0.00 0.00 3.71
8 9 0.908910 TGTGAACCGCCATGTATCCT 59.091 50.000 0.00 0.00 0.00 3.24
9 10 1.299541 CTGTGAACCGCCATGTATCC 58.700 55.000 0.00 0.00 0.00 2.59
10 11 1.299541 CCTGTGAACCGCCATGTATC 58.700 55.000 0.00 0.00 0.00 2.24
11 12 0.748005 GCCTGTGAACCGCCATGTAT 60.748 55.000 0.00 0.00 0.00 2.29
12 13 1.376683 GCCTGTGAACCGCCATGTA 60.377 57.895 0.00 0.00 0.00 2.29
13 14 2.672996 GCCTGTGAACCGCCATGT 60.673 61.111 0.00 0.00 0.00 3.21
14 15 2.203972 CTTGCCTGTGAACCGCCATG 62.204 60.000 0.00 0.00 0.00 3.66
15 16 1.973281 CTTGCCTGTGAACCGCCAT 60.973 57.895 0.00 0.00 0.00 4.40
16 17 2.594303 CTTGCCTGTGAACCGCCA 60.594 61.111 0.00 0.00 0.00 5.69
17 18 3.365265 CCTTGCCTGTGAACCGCC 61.365 66.667 0.00 0.00 0.00 6.13
18 19 3.365265 CCCTTGCCTGTGAACCGC 61.365 66.667 0.00 0.00 0.00 5.68
19 20 3.365265 GCCCTTGCCTGTGAACCG 61.365 66.667 0.00 0.00 0.00 4.44
36 37 1.380380 GTCATCCTTGGGCCTTGGG 60.380 63.158 4.53 4.27 0.00 4.12
37 38 0.040204 AAGTCATCCTTGGGCCTTGG 59.960 55.000 4.53 7.10 30.18 3.61
38 39 2.806945 TAAGTCATCCTTGGGCCTTG 57.193 50.000 4.53 0.00 34.46 3.61
39 40 2.024941 CCTTAAGTCATCCTTGGGCCTT 60.025 50.000 4.53 0.00 34.46 4.35
40 41 1.566231 CCTTAAGTCATCCTTGGGCCT 59.434 52.381 4.53 0.00 34.46 5.19
41 42 2.024306 GCCTTAAGTCATCCTTGGGCC 61.024 57.143 0.00 0.00 42.48 5.80
42 43 1.393603 GCCTTAAGTCATCCTTGGGC 58.606 55.000 0.97 0.00 42.12 5.36
43 44 1.410224 GGGCCTTAAGTCATCCTTGGG 60.410 57.143 0.84 0.00 34.46 4.12
44 45 1.284785 TGGGCCTTAAGTCATCCTTGG 59.715 52.381 4.53 0.00 34.46 3.61
45 46 2.806945 TGGGCCTTAAGTCATCCTTG 57.193 50.000 4.53 0.00 34.46 3.61
46 47 4.307259 TCTATGGGCCTTAAGTCATCCTT 58.693 43.478 4.53 0.00 37.17 3.36
47 48 3.941629 TCTATGGGCCTTAAGTCATCCT 58.058 45.455 4.53 0.00 0.00 3.24
48 49 4.103311 ACTTCTATGGGCCTTAAGTCATCC 59.897 45.833 4.53 0.00 0.00 3.51
49 50 5.297569 ACTTCTATGGGCCTTAAGTCATC 57.702 43.478 4.53 0.00 0.00 2.92
50 51 6.824958 TTACTTCTATGGGCCTTAAGTCAT 57.175 37.500 4.53 0.00 32.85 3.06
51 52 6.412214 GTTTACTTCTATGGGCCTTAAGTCA 58.588 40.000 4.53 0.00 32.85 3.41
52 53 5.821470 GGTTTACTTCTATGGGCCTTAAGTC 59.179 44.000 4.53 0.00 32.85 3.01
53 54 5.628433 CGGTTTACTTCTATGGGCCTTAAGT 60.628 44.000 4.53 8.84 34.86 2.24
54 55 4.814771 CGGTTTACTTCTATGGGCCTTAAG 59.185 45.833 4.53 2.63 0.00 1.85
55 56 4.773013 CGGTTTACTTCTATGGGCCTTAA 58.227 43.478 4.53 0.00 0.00 1.85
56 57 3.432608 GCGGTTTACTTCTATGGGCCTTA 60.433 47.826 4.53 1.19 0.00 2.69
57 58 2.682858 GCGGTTTACTTCTATGGGCCTT 60.683 50.000 4.53 0.00 0.00 4.35
58 59 1.134189 GCGGTTTACTTCTATGGGCCT 60.134 52.381 4.53 0.00 0.00 5.19
59 60 1.306148 GCGGTTTACTTCTATGGGCC 58.694 55.000 0.00 0.00 0.00 5.80
60 61 1.306148 GGCGGTTTACTTCTATGGGC 58.694 55.000 0.00 0.00 0.00 5.36
61 62 2.702592 TGGCGGTTTACTTCTATGGG 57.297 50.000 0.00 0.00 0.00 4.00
62 63 5.179368 CACATATGGCGGTTTACTTCTATGG 59.821 44.000 7.80 0.00 0.00 2.74
63 64 5.758296 ACACATATGGCGGTTTACTTCTATG 59.242 40.000 7.80 0.00 0.00 2.23
64 65 5.925509 ACACATATGGCGGTTTACTTCTAT 58.074 37.500 7.80 0.00 0.00 1.98
65 66 5.347620 ACACATATGGCGGTTTACTTCTA 57.652 39.130 7.80 0.00 0.00 2.10
66 67 4.216411 ACACATATGGCGGTTTACTTCT 57.784 40.909 7.80 0.00 0.00 2.85
67 68 5.813672 TCTTACACATATGGCGGTTTACTTC 59.186 40.000 7.80 0.00 0.00 3.01
68 69 5.583457 GTCTTACACATATGGCGGTTTACTT 59.417 40.000 7.80 0.00 0.00 2.24
69 70 5.105064 AGTCTTACACATATGGCGGTTTACT 60.105 40.000 7.80 0.00 0.00 2.24
70 71 5.114081 AGTCTTACACATATGGCGGTTTAC 58.886 41.667 7.80 0.00 0.00 2.01
71 72 5.347620 AGTCTTACACATATGGCGGTTTA 57.652 39.130 7.80 0.00 0.00 2.01
72 73 4.216411 AGTCTTACACATATGGCGGTTT 57.784 40.909 7.80 0.00 0.00 3.27
73 74 3.906720 AGTCTTACACATATGGCGGTT 57.093 42.857 7.80 0.00 0.00 4.44
74 75 3.055385 ACAAGTCTTACACATATGGCGGT 60.055 43.478 7.80 5.03 0.00 5.68
75 76 3.531538 ACAAGTCTTACACATATGGCGG 58.468 45.455 7.80 0.00 0.00 6.13
76 77 5.177511 CCATACAAGTCTTACACATATGGCG 59.822 44.000 7.80 0.02 33.94 5.69
77 78 6.055588 ACCATACAAGTCTTACACATATGGC 58.944 40.000 7.80 0.00 39.33 4.40
78 79 9.261180 CTTACCATACAAGTCTTACACATATGG 57.739 37.037 7.80 5.95 40.43 2.74
79 80 9.261180 CCTTACCATACAAGTCTTACACATATG 57.739 37.037 0.00 0.00 0.00 1.78
80 81 7.931948 GCCTTACCATACAAGTCTTACACATAT 59.068 37.037 0.00 0.00 0.00 1.78
81 82 7.093245 TGCCTTACCATACAAGTCTTACACATA 60.093 37.037 0.00 0.00 0.00 2.29
82 83 6.113411 GCCTTACCATACAAGTCTTACACAT 58.887 40.000 0.00 0.00 0.00 3.21
83 84 5.012251 TGCCTTACCATACAAGTCTTACACA 59.988 40.000 0.00 0.00 0.00 3.72
84 85 5.484715 TGCCTTACCATACAAGTCTTACAC 58.515 41.667 0.00 0.00 0.00 2.90
85 86 5.748670 TGCCTTACCATACAAGTCTTACA 57.251 39.130 0.00 0.00 0.00 2.41
86 87 6.113411 ACATGCCTTACCATACAAGTCTTAC 58.887 40.000 0.00 0.00 0.00 2.34
87 88 6.308015 ACATGCCTTACCATACAAGTCTTA 57.692 37.500 0.00 0.00 0.00 2.10
88 89 5.179452 ACATGCCTTACCATACAAGTCTT 57.821 39.130 0.00 0.00 0.00 3.01
89 90 4.844349 ACATGCCTTACCATACAAGTCT 57.156 40.909 0.00 0.00 0.00 3.24
90 91 7.442656 ACTATACATGCCTTACCATACAAGTC 58.557 38.462 0.00 0.00 0.00 3.01
91 92 7.374975 ACTATACATGCCTTACCATACAAGT 57.625 36.000 0.00 0.00 0.00 3.16
92 93 9.424319 CTAACTATACATGCCTTACCATACAAG 57.576 37.037 0.00 0.00 0.00 3.16
93 94 8.930527 ACTAACTATACATGCCTTACCATACAA 58.069 33.333 0.00 0.00 0.00 2.41
94 95 8.486942 ACTAACTATACATGCCTTACCATACA 57.513 34.615 0.00 0.00 0.00 2.29
95 96 8.582437 TGACTAACTATACATGCCTTACCATAC 58.418 37.037 0.00 0.00 0.00 2.39
96 97 8.582437 GTGACTAACTATACATGCCTTACCATA 58.418 37.037 0.00 0.00 0.00 2.74
97 98 7.442656 GTGACTAACTATACATGCCTTACCAT 58.557 38.462 0.00 0.00 0.00 3.55
98 99 6.183360 GGTGACTAACTATACATGCCTTACCA 60.183 42.308 0.00 0.00 0.00 3.25
99 100 6.221659 GGTGACTAACTATACATGCCTTACC 58.778 44.000 0.00 0.00 0.00 2.85
100 101 5.919141 CGGTGACTAACTATACATGCCTTAC 59.081 44.000 0.00 0.00 0.00 2.34
101 102 5.829391 TCGGTGACTAACTATACATGCCTTA 59.171 40.000 0.00 0.00 0.00 2.69
102 103 4.647853 TCGGTGACTAACTATACATGCCTT 59.352 41.667 0.00 0.00 0.00 4.35
103 104 4.212716 TCGGTGACTAACTATACATGCCT 58.787 43.478 0.00 0.00 0.00 4.75
104 105 4.547532 CTCGGTGACTAACTATACATGCC 58.452 47.826 0.00 0.00 0.00 4.40
105 106 3.982058 GCTCGGTGACTAACTATACATGC 59.018 47.826 0.00 0.00 0.00 4.06
106 107 4.547532 GGCTCGGTGACTAACTATACATG 58.452 47.826 0.00 0.00 0.00 3.21
107 108 3.252701 CGGCTCGGTGACTAACTATACAT 59.747 47.826 0.00 0.00 0.00 2.29
108 109 2.615447 CGGCTCGGTGACTAACTATACA 59.385 50.000 0.00 0.00 0.00 2.29
109 110 2.031333 CCGGCTCGGTGACTAACTATAC 60.031 54.545 5.56 0.00 42.73 1.47
110 111 2.224606 CCGGCTCGGTGACTAACTATA 58.775 52.381 5.56 0.00 42.73 1.31
111 112 1.030457 CCGGCTCGGTGACTAACTAT 58.970 55.000 5.56 0.00 42.73 2.12
112 113 2.485677 CCGGCTCGGTGACTAACTA 58.514 57.895 5.56 0.00 42.73 2.24
113 114 3.285371 CCGGCTCGGTGACTAACT 58.715 61.111 5.56 0.00 42.73 2.24
123 124 0.659427 TAGATAACGTGTCCGGCTCG 59.341 55.000 15.42 15.42 38.78 5.03
124 125 2.292569 TCATAGATAACGTGTCCGGCTC 59.707 50.000 0.00 0.00 38.78 4.70
125 126 2.293677 CTCATAGATAACGTGTCCGGCT 59.706 50.000 0.00 0.00 38.78 5.52
126 127 2.034305 ACTCATAGATAACGTGTCCGGC 59.966 50.000 0.00 0.00 38.78 6.13
127 128 3.606384 CGACTCATAGATAACGTGTCCGG 60.606 52.174 0.00 0.00 38.78 5.14
128 129 3.542690 CGACTCATAGATAACGTGTCCG 58.457 50.000 0.00 0.00 40.83 4.79
129 130 3.852572 GCCGACTCATAGATAACGTGTCC 60.853 52.174 0.00 0.00 0.00 4.02
130 131 3.298317 GCCGACTCATAGATAACGTGTC 58.702 50.000 0.00 0.00 0.00 3.67
131 132 2.034305 GGCCGACTCATAGATAACGTGT 59.966 50.000 0.00 0.00 0.00 4.49
132 133 2.662700 GGCCGACTCATAGATAACGTG 58.337 52.381 0.00 0.00 0.00 4.49
133 134 1.266175 CGGCCGACTCATAGATAACGT 59.734 52.381 24.07 0.00 0.00 3.99
134 135 1.401148 CCGGCCGACTCATAGATAACG 60.401 57.143 30.73 0.00 0.00 3.18
135 136 1.067776 CCCGGCCGACTCATAGATAAC 60.068 57.143 30.73 0.00 0.00 1.89
136 137 1.202964 TCCCGGCCGACTCATAGATAA 60.203 52.381 30.73 0.00 0.00 1.75
137 138 0.402887 TCCCGGCCGACTCATAGATA 59.597 55.000 30.73 0.00 0.00 1.98
138 139 1.153061 TCCCGGCCGACTCATAGAT 59.847 57.895 30.73 0.00 0.00 1.98
139 140 1.826921 GTCCCGGCCGACTCATAGA 60.827 63.158 30.73 8.37 0.00 1.98
140 141 1.392710 AAGTCCCGGCCGACTCATAG 61.393 60.000 30.73 7.66 42.35 2.23
141 142 1.380785 AAGTCCCGGCCGACTCATA 60.381 57.895 30.73 1.33 42.35 2.15
142 143 2.683933 AAGTCCCGGCCGACTCAT 60.684 61.111 30.73 5.99 42.35 2.90
143 144 3.379445 GAAGTCCCGGCCGACTCA 61.379 66.667 30.73 3.56 42.35 3.41
144 145 4.493747 CGAAGTCCCGGCCGACTC 62.494 72.222 30.73 15.85 42.35 3.36
148 149 4.796231 CTCACGAAGTCCCGGCCG 62.796 72.222 21.04 21.04 41.61 6.13
166 167 3.136123 CAGGTTGATGCCCAGCGG 61.136 66.667 0.00 0.00 0.00 5.52
167 168 2.360350 ACAGGTTGATGCCCAGCG 60.360 61.111 0.00 0.00 0.00 5.18
168 169 0.322456 TACACAGGTTGATGCCCAGC 60.322 55.000 0.00 0.00 0.00 4.85
169 170 2.425143 ATACACAGGTTGATGCCCAG 57.575 50.000 0.00 0.00 0.00 4.45
170 171 5.638530 TTATATACACAGGTTGATGCCCA 57.361 39.130 0.00 0.00 0.00 5.36
171 172 5.473504 CCTTTATATACACAGGTTGATGCCC 59.526 44.000 0.00 0.00 0.00 5.36
172 173 5.473504 CCCTTTATATACACAGGTTGATGCC 59.526 44.000 2.52 0.00 0.00 4.40
173 174 6.204882 GTCCCTTTATATACACAGGTTGATGC 59.795 42.308 2.52 0.00 0.00 3.91
174 175 6.423905 CGTCCCTTTATATACACAGGTTGATG 59.576 42.308 2.52 0.00 0.00 3.07
175 176 6.325545 TCGTCCCTTTATATACACAGGTTGAT 59.674 38.462 2.52 0.00 0.00 2.57
176 177 5.657745 TCGTCCCTTTATATACACAGGTTGA 59.342 40.000 2.52 0.00 0.00 3.18
177 178 5.751990 GTCGTCCCTTTATATACACAGGTTG 59.248 44.000 2.52 0.00 0.00 3.77
178 179 5.163374 GGTCGTCCCTTTATATACACAGGTT 60.163 44.000 0.00 0.00 0.00 3.50
179 180 4.343239 GGTCGTCCCTTTATATACACAGGT 59.657 45.833 0.00 0.00 0.00 4.00
180 181 4.879598 GGTCGTCCCTTTATATACACAGG 58.120 47.826 0.00 0.00 0.00 4.00
206 207 4.697756 TCTTGCCCTGAACCGCCG 62.698 66.667 0.00 0.00 0.00 6.46
207 208 1.901464 TTTCTTGCCCTGAACCGCC 60.901 57.895 0.00 0.00 0.00 6.13
208 209 1.285950 GTTTCTTGCCCTGAACCGC 59.714 57.895 0.00 0.00 0.00 5.68
209 210 1.001378 CTTGTTTCTTGCCCTGAACCG 60.001 52.381 0.00 0.00 0.00 4.44
210 211 2.294512 CTCTTGTTTCTTGCCCTGAACC 59.705 50.000 0.00 0.00 0.00 3.62
211 212 3.214328 TCTCTTGTTTCTTGCCCTGAAC 58.786 45.455 0.00 0.00 0.00 3.18
212 213 3.576078 TCTCTTGTTTCTTGCCCTGAA 57.424 42.857 0.00 0.00 0.00 3.02
213 214 3.795688 ATCTCTTGTTTCTTGCCCTGA 57.204 42.857 0.00 0.00 0.00 3.86
214 215 3.822735 TCAATCTCTTGTTTCTTGCCCTG 59.177 43.478 0.00 0.00 33.87 4.45
215 216 4.104383 TCAATCTCTTGTTTCTTGCCCT 57.896 40.909 0.00 0.00 33.87 5.19
216 217 4.853924 TTCAATCTCTTGTTTCTTGCCC 57.146 40.909 0.00 0.00 33.87 5.36
217 218 6.276091 AGTTTTCAATCTCTTGTTTCTTGCC 58.724 36.000 0.00 0.00 33.87 4.52
218 219 8.345565 TCTAGTTTTCAATCTCTTGTTTCTTGC 58.654 33.333 0.00 0.00 33.87 4.01
221 222 9.784531 TGATCTAGTTTTCAATCTCTTGTTTCT 57.215 29.630 0.00 0.00 33.87 2.52
224 225 9.784531 TCTTGATCTAGTTTTCAATCTCTTGTT 57.215 29.630 4.06 0.00 31.83 2.83
225 226 9.784531 TTCTTGATCTAGTTTTCAATCTCTTGT 57.215 29.630 4.06 0.00 31.83 3.16
231 232 9.913451 CGAATCTTCTTGATCTAGTTTTCAATC 57.087 33.333 4.06 0.00 33.57 2.67
232 233 8.394121 GCGAATCTTCTTGATCTAGTTTTCAAT 58.606 33.333 4.06 0.00 33.57 2.57
233 234 7.604164 AGCGAATCTTCTTGATCTAGTTTTCAA 59.396 33.333 4.06 0.00 33.57 2.69
234 235 7.099764 AGCGAATCTTCTTGATCTAGTTTTCA 58.900 34.615 4.06 0.00 33.57 2.69
235 236 7.254286 GGAGCGAATCTTCTTGATCTAGTTTTC 60.254 40.741 4.06 3.57 33.57 2.29
236 237 6.536941 GGAGCGAATCTTCTTGATCTAGTTTT 59.463 38.462 4.06 0.00 33.57 2.43
237 238 6.045955 GGAGCGAATCTTCTTGATCTAGTTT 58.954 40.000 4.06 0.00 33.57 2.66
238 239 5.452636 GGGAGCGAATCTTCTTGATCTAGTT 60.453 44.000 4.06 0.00 33.57 2.24
239 240 4.038642 GGGAGCGAATCTTCTTGATCTAGT 59.961 45.833 4.06 0.00 33.57 2.57
240 241 4.280677 AGGGAGCGAATCTTCTTGATCTAG 59.719 45.833 0.00 0.00 33.57 2.43
241 242 4.038522 CAGGGAGCGAATCTTCTTGATCTA 59.961 45.833 0.00 0.00 33.57 1.98
242 243 3.037549 AGGGAGCGAATCTTCTTGATCT 58.962 45.455 0.00 0.00 33.57 2.75
243 244 3.129871 CAGGGAGCGAATCTTCTTGATC 58.870 50.000 0.00 0.00 33.57 2.92
244 245 2.744494 GCAGGGAGCGAATCTTCTTGAT 60.744 50.000 0.00 0.00 36.89 2.57
245 246 1.406069 GCAGGGAGCGAATCTTCTTGA 60.406 52.381 0.00 0.00 29.20 3.02
246 247 1.012841 GCAGGGAGCGAATCTTCTTG 58.987 55.000 0.00 0.00 30.91 3.02
247 248 3.467776 GCAGGGAGCGAATCTTCTT 57.532 52.632 0.00 0.00 0.00 2.52
257 258 0.747255 TGTCTCGATTAGCAGGGAGC 59.253 55.000 0.00 0.00 46.19 4.70
258 259 4.804108 CTTATGTCTCGATTAGCAGGGAG 58.196 47.826 0.00 0.00 0.00 4.30
259 260 3.005897 GCTTATGTCTCGATTAGCAGGGA 59.994 47.826 0.00 0.00 0.00 4.20
260 261 3.243873 TGCTTATGTCTCGATTAGCAGGG 60.244 47.826 0.00 0.00 34.05 4.45
261 262 3.982475 TGCTTATGTCTCGATTAGCAGG 58.018 45.455 0.00 0.00 34.05 4.85
262 263 6.090088 GGTATTGCTTATGTCTCGATTAGCAG 59.910 42.308 0.00 0.00 39.49 4.24
263 264 5.926542 GGTATTGCTTATGTCTCGATTAGCA 59.073 40.000 0.00 0.00 36.90 3.49
264 265 5.926542 TGGTATTGCTTATGTCTCGATTAGC 59.073 40.000 0.00 0.00 0.00 3.09
265 266 6.366332 GGTGGTATTGCTTATGTCTCGATTAG 59.634 42.308 0.00 0.00 0.00 1.73
266 267 6.041637 AGGTGGTATTGCTTATGTCTCGATTA 59.958 38.462 0.00 0.00 0.00 1.75
267 268 5.057149 GGTGGTATTGCTTATGTCTCGATT 58.943 41.667 0.00 0.00 0.00 3.34
268 269 4.345257 AGGTGGTATTGCTTATGTCTCGAT 59.655 41.667 0.00 0.00 0.00 3.59
269 270 3.704566 AGGTGGTATTGCTTATGTCTCGA 59.295 43.478 0.00 0.00 0.00 4.04
270 271 4.051922 GAGGTGGTATTGCTTATGTCTCG 58.948 47.826 0.00 0.00 0.00 4.04
271 272 5.023533 TGAGGTGGTATTGCTTATGTCTC 57.976 43.478 0.00 0.00 0.00 3.36
272 273 5.435686 TTGAGGTGGTATTGCTTATGTCT 57.564 39.130 0.00 0.00 0.00 3.41
273 274 5.648092 AGTTTGAGGTGGTATTGCTTATGTC 59.352 40.000 0.00 0.00 0.00 3.06
274 275 5.415701 CAGTTTGAGGTGGTATTGCTTATGT 59.584 40.000 0.00 0.00 0.00 2.29
275 276 5.163622 CCAGTTTGAGGTGGTATTGCTTATG 60.164 44.000 0.00 0.00 0.00 1.90
276 277 4.949856 CCAGTTTGAGGTGGTATTGCTTAT 59.050 41.667 0.00 0.00 0.00 1.73
277 278 4.042311 TCCAGTTTGAGGTGGTATTGCTTA 59.958 41.667 0.00 0.00 35.14 3.09
278 279 3.157087 CCAGTTTGAGGTGGTATTGCTT 58.843 45.455 0.00 0.00 0.00 3.91
279 280 2.375174 TCCAGTTTGAGGTGGTATTGCT 59.625 45.455 0.00 0.00 35.14 3.91
280 281 2.790433 TCCAGTTTGAGGTGGTATTGC 58.210 47.619 0.00 0.00 35.14 3.56
281 282 5.590259 CCTAATCCAGTTTGAGGTGGTATTG 59.410 44.000 0.00 0.00 35.14 1.90
282 283 5.755849 CCTAATCCAGTTTGAGGTGGTATT 58.244 41.667 0.00 0.00 35.14 1.89
283 284 4.385310 GCCTAATCCAGTTTGAGGTGGTAT 60.385 45.833 0.00 0.00 35.14 2.73
284 285 3.054655 GCCTAATCCAGTTTGAGGTGGTA 60.055 47.826 0.00 0.00 35.14 3.25
285 286 2.290960 GCCTAATCCAGTTTGAGGTGGT 60.291 50.000 0.00 0.00 35.14 4.16
286 287 2.369394 GCCTAATCCAGTTTGAGGTGG 58.631 52.381 0.00 0.00 34.87 4.61
287 288 2.025887 AGGCCTAATCCAGTTTGAGGTG 60.026 50.000 1.29 0.00 0.00 4.00
288 289 2.279173 AGGCCTAATCCAGTTTGAGGT 58.721 47.619 1.29 0.00 0.00 3.85
289 290 3.372440 AAGGCCTAATCCAGTTTGAGG 57.628 47.619 5.16 0.00 0.00 3.86
290 291 5.125578 GGTAAAAGGCCTAATCCAGTTTGAG 59.874 44.000 5.16 0.00 0.00 3.02
291 292 5.014202 GGTAAAAGGCCTAATCCAGTTTGA 58.986 41.667 5.16 0.00 0.00 2.69
292 293 5.016831 AGGTAAAAGGCCTAATCCAGTTTG 58.983 41.667 5.16 0.00 33.97 2.93
293 294 5.270979 AGGTAAAAGGCCTAATCCAGTTT 57.729 39.130 5.16 3.23 33.97 2.66
294 295 4.948062 AGGTAAAAGGCCTAATCCAGTT 57.052 40.909 5.16 0.00 33.97 3.16
295 296 4.291249 TGAAGGTAAAAGGCCTAATCCAGT 59.709 41.667 5.16 0.00 34.81 4.00
296 297 4.640647 GTGAAGGTAAAAGGCCTAATCCAG 59.359 45.833 5.16 0.00 34.81 3.86
297 298 4.569015 GGTGAAGGTAAAAGGCCTAATCCA 60.569 45.833 5.16 0.00 34.81 3.41
298 299 3.952323 GGTGAAGGTAAAAGGCCTAATCC 59.048 47.826 5.16 6.90 34.81 3.01
299 300 3.626217 CGGTGAAGGTAAAAGGCCTAATC 59.374 47.826 5.16 0.00 34.81 1.75
300 301 3.617284 CGGTGAAGGTAAAAGGCCTAAT 58.383 45.455 5.16 0.00 34.81 1.73
301 302 2.876892 GCGGTGAAGGTAAAAGGCCTAA 60.877 50.000 5.16 0.00 34.81 2.69
302 303 1.339342 GCGGTGAAGGTAAAAGGCCTA 60.339 52.381 5.16 0.00 34.81 3.93
303 304 0.608308 GCGGTGAAGGTAAAAGGCCT 60.608 55.000 0.00 0.00 38.11 5.19
304 305 0.891904 TGCGGTGAAGGTAAAAGGCC 60.892 55.000 0.00 0.00 0.00 5.19
305 306 0.955905 TTGCGGTGAAGGTAAAAGGC 59.044 50.000 0.00 0.00 0.00 4.35
306 307 1.539827 CCTTGCGGTGAAGGTAAAAGG 59.460 52.381 0.00 0.00 38.19 3.11
307 308 1.539827 CCCTTGCGGTGAAGGTAAAAG 59.460 52.381 0.00 0.00 41.02 2.27
308 309 1.611519 CCCTTGCGGTGAAGGTAAAA 58.388 50.000 0.00 0.00 41.02 1.52
309 310 0.250989 CCCCTTGCGGTGAAGGTAAA 60.251 55.000 0.00 0.00 41.02 2.01
310 311 1.377229 CCCCTTGCGGTGAAGGTAA 59.623 57.895 0.00 0.00 41.02 2.85
311 312 3.074281 CCCCTTGCGGTGAAGGTA 58.926 61.111 0.00 0.00 41.02 3.08
312 313 4.660938 GCCCCTTGCGGTGAAGGT 62.661 66.667 0.00 0.00 41.02 3.50
321 322 2.552231 ATACTGGTTCGGCCCCTTGC 62.552 60.000 0.00 0.00 40.16 4.01
322 323 0.834612 TATACTGGTTCGGCCCCTTG 59.165 55.000 0.00 0.00 36.04 3.61
323 324 1.587066 TTATACTGGTTCGGCCCCTT 58.413 50.000 0.00 0.00 36.04 3.95
324 325 1.211212 GTTTATACTGGTTCGGCCCCT 59.789 52.381 0.00 0.00 36.04 4.79
325 326 1.211212 AGTTTATACTGGTTCGGCCCC 59.789 52.381 0.00 0.00 36.04 5.80
326 327 2.558378 GAGTTTATACTGGTTCGGCCC 58.442 52.381 0.00 0.00 33.84 5.80
327 328 2.169978 AGGAGTTTATACTGGTTCGGCC 59.830 50.000 0.00 0.00 33.84 6.13
328 329 3.195661 CAGGAGTTTATACTGGTTCGGC 58.804 50.000 0.00 0.00 33.84 5.54
329 330 4.181578 CACAGGAGTTTATACTGGTTCGG 58.818 47.826 0.00 0.00 36.57 4.30
330 331 4.817517 ACACAGGAGTTTATACTGGTTCG 58.182 43.478 0.00 0.00 36.57 3.95
331 332 5.046520 AGGACACAGGAGTTTATACTGGTTC 60.047 44.000 0.00 0.00 36.57 3.62
332 333 4.844655 AGGACACAGGAGTTTATACTGGTT 59.155 41.667 0.00 0.00 36.57 3.67
333 334 4.426704 AGGACACAGGAGTTTATACTGGT 58.573 43.478 0.00 0.00 36.57 4.00
334 335 5.422214 AAGGACACAGGAGTTTATACTGG 57.578 43.478 0.00 0.00 36.57 4.00
335 336 6.231211 ACAAAGGACACAGGAGTTTATACTG 58.769 40.000 0.00 0.00 33.84 2.74
336 337 6.435292 ACAAAGGACACAGGAGTTTATACT 57.565 37.500 0.00 0.00 37.31 2.12
337 338 5.642491 GGACAAAGGACACAGGAGTTTATAC 59.358 44.000 0.00 0.00 0.00 1.47
338 339 5.280317 GGGACAAAGGACACAGGAGTTTATA 60.280 44.000 0.00 0.00 0.00 0.98
339 340 4.506802 GGGACAAAGGACACAGGAGTTTAT 60.507 45.833 0.00 0.00 0.00 1.40
340 341 3.181448 GGGACAAAGGACACAGGAGTTTA 60.181 47.826 0.00 0.00 0.00 2.01
341 342 2.422945 GGGACAAAGGACACAGGAGTTT 60.423 50.000 0.00 0.00 0.00 2.66
342 343 1.143073 GGGACAAAGGACACAGGAGTT 59.857 52.381 0.00 0.00 0.00 3.01
343 344 0.765510 GGGACAAAGGACACAGGAGT 59.234 55.000 0.00 0.00 0.00 3.85
344 345 0.320771 CGGGACAAAGGACACAGGAG 60.321 60.000 0.00 0.00 0.00 3.69
345 346 1.052124 ACGGGACAAAGGACACAGGA 61.052 55.000 0.00 0.00 0.00 3.86
346 347 0.179029 AACGGGACAAAGGACACAGG 60.179 55.000 0.00 0.00 0.00 4.00
347 348 1.675552 AAACGGGACAAAGGACACAG 58.324 50.000 0.00 0.00 0.00 3.66
348 349 2.944349 GTTAAACGGGACAAAGGACACA 59.056 45.455 0.00 0.00 0.00 3.72
349 350 2.291465 GGTTAAACGGGACAAAGGACAC 59.709 50.000 0.00 0.00 0.00 3.67
350 351 2.574450 GGTTAAACGGGACAAAGGACA 58.426 47.619 0.00 0.00 0.00 4.02
351 352 1.881973 GGGTTAAACGGGACAAAGGAC 59.118 52.381 0.00 0.00 0.00 3.85
352 353 1.202915 GGGGTTAAACGGGACAAAGGA 60.203 52.381 0.00 0.00 0.00 3.36
353 354 1.250328 GGGGTTAAACGGGACAAAGG 58.750 55.000 0.00 0.00 0.00 3.11
354 355 1.202964 AGGGGGTTAAACGGGACAAAG 60.203 52.381 0.00 0.00 0.00 2.77
355 356 0.852155 AGGGGGTTAAACGGGACAAA 59.148 50.000 0.00 0.00 0.00 2.83
356 357 0.852155 AAGGGGGTTAAACGGGACAA 59.148 50.000 0.00 0.00 0.00 3.18
357 358 1.739750 TAAGGGGGTTAAACGGGACA 58.260 50.000 0.00 0.00 0.00 4.02
358 359 2.715046 CTTAAGGGGGTTAAACGGGAC 58.285 52.381 0.00 0.00 29.93 4.46
359 360 1.004628 GCTTAAGGGGGTTAAACGGGA 59.995 52.381 4.29 0.00 29.93 5.14
360 361 1.005097 AGCTTAAGGGGGTTAAACGGG 59.995 52.381 4.29 0.00 29.93 5.28
361 362 2.502142 AGCTTAAGGGGGTTAAACGG 57.498 50.000 4.29 0.00 29.93 4.44
362 363 3.691118 GGTTAGCTTAAGGGGGTTAAACG 59.309 47.826 4.29 0.00 29.93 3.60
363 364 4.927049 AGGTTAGCTTAAGGGGGTTAAAC 58.073 43.478 4.29 0.00 29.93 2.01
364 365 5.792188 ACTAGGTTAGCTTAAGGGGGTTAAA 59.208 40.000 4.29 0.00 29.93 1.52
365 366 5.353125 ACTAGGTTAGCTTAAGGGGGTTAA 58.647 41.667 4.29 0.00 0.00 2.01
366 367 4.964095 ACTAGGTTAGCTTAAGGGGGTTA 58.036 43.478 4.29 0.00 0.00 2.85
367 368 3.811842 ACTAGGTTAGCTTAAGGGGGTT 58.188 45.455 4.29 0.00 0.00 4.11
368 369 3.503773 ACTAGGTTAGCTTAAGGGGGT 57.496 47.619 4.29 0.00 0.00 4.95
369 370 3.684697 GCAACTAGGTTAGCTTAAGGGGG 60.685 52.174 4.29 0.00 0.00 5.40
370 371 3.542648 GCAACTAGGTTAGCTTAAGGGG 58.457 50.000 4.29 0.00 0.00 4.79
371 372 3.118884 TCGCAACTAGGTTAGCTTAAGGG 60.119 47.826 4.29 0.00 0.00 3.95
372 373 4.119442 TCGCAACTAGGTTAGCTTAAGG 57.881 45.455 4.29 0.00 0.00 2.69
373 374 5.348986 TCATCGCAACTAGGTTAGCTTAAG 58.651 41.667 0.00 0.00 0.00 1.85
374 375 5.333299 TCATCGCAACTAGGTTAGCTTAA 57.667 39.130 0.00 0.00 0.00 1.85
375 376 4.994907 TCATCGCAACTAGGTTAGCTTA 57.005 40.909 0.00 0.00 0.00 3.09
376 377 3.887621 TCATCGCAACTAGGTTAGCTT 57.112 42.857 0.00 0.00 0.00 3.74
377 378 4.408182 AATCATCGCAACTAGGTTAGCT 57.592 40.909 0.00 0.00 0.00 3.32
378 379 4.570772 TGAAATCATCGCAACTAGGTTAGC 59.429 41.667 0.00 0.00 0.00 3.09
379 380 5.812642 AGTGAAATCATCGCAACTAGGTTAG 59.187 40.000 0.00 0.00 41.18 2.34
380 381 5.730550 AGTGAAATCATCGCAACTAGGTTA 58.269 37.500 0.00 0.00 41.18 2.85
381 382 4.579869 AGTGAAATCATCGCAACTAGGTT 58.420 39.130 0.00 0.00 41.18 3.50
382 383 4.207891 AGTGAAATCATCGCAACTAGGT 57.792 40.909 0.00 0.00 41.18 3.08
383 384 5.352284 AGTAGTGAAATCATCGCAACTAGG 58.648 41.667 0.00 0.00 41.18 3.02
384 385 7.702772 ACTTAGTAGTGAAATCATCGCAACTAG 59.297 37.037 0.00 0.00 41.18 2.57
385 386 7.544622 ACTTAGTAGTGAAATCATCGCAACTA 58.455 34.615 0.00 0.00 41.18 2.24
386 387 6.398918 ACTTAGTAGTGAAATCATCGCAACT 58.601 36.000 0.00 0.00 41.18 3.16
387 388 6.237861 GGACTTAGTAGTGAAATCATCGCAAC 60.238 42.308 0.00 0.00 41.18 4.17
388 389 5.810587 GGACTTAGTAGTGAAATCATCGCAA 59.189 40.000 0.00 0.00 41.18 4.85
389 390 5.127194 AGGACTTAGTAGTGAAATCATCGCA 59.873 40.000 0.00 0.00 41.18 5.10
390 391 5.593010 AGGACTTAGTAGTGAAATCATCGC 58.407 41.667 0.00 0.00 38.91 4.58
391 392 7.376336 CGTAAGGACTTAGTAGTGAAATCATCG 59.624 40.741 0.00 0.00 33.84 3.84
392 393 7.167801 GCGTAAGGACTTAGTAGTGAAATCATC 59.832 40.741 0.00 0.00 33.61 2.92
393 394 6.979238 GCGTAAGGACTTAGTAGTGAAATCAT 59.021 38.462 0.00 0.00 33.61 2.45
394 395 6.152323 AGCGTAAGGACTTAGTAGTGAAATCA 59.848 38.462 0.00 0.00 33.61 2.57
395 396 6.562518 AGCGTAAGGACTTAGTAGTGAAATC 58.437 40.000 0.00 0.00 33.61 2.17
396 397 6.527057 AGCGTAAGGACTTAGTAGTGAAAT 57.473 37.500 0.00 0.00 33.61 2.17
397 398 5.972107 AGCGTAAGGACTTAGTAGTGAAA 57.028 39.130 0.00 0.00 33.61 2.69
398 399 5.587844 CCTAGCGTAAGGACTTAGTAGTGAA 59.412 44.000 0.00 0.00 39.15 3.18
399 400 5.104776 TCCTAGCGTAAGGACTTAGTAGTGA 60.105 44.000 4.00 0.00 40.86 3.41
400 401 5.121811 TCCTAGCGTAAGGACTTAGTAGTG 58.878 45.833 4.00 0.00 40.86 2.74
401 402 5.365021 TCCTAGCGTAAGGACTTAGTAGT 57.635 43.478 4.00 0.00 40.86 2.73
410 411 1.681793 GCAGATGTCCTAGCGTAAGGA 59.318 52.381 4.00 4.00 43.58 3.36
411 412 1.269831 GGCAGATGTCCTAGCGTAAGG 60.270 57.143 0.00 0.00 38.06 2.69
412 413 1.600663 CGGCAGATGTCCTAGCGTAAG 60.601 57.143 0.00 0.00 43.44 2.34
413 414 0.384309 CGGCAGATGTCCTAGCGTAA 59.616 55.000 0.00 0.00 0.00 3.18
414 415 0.750546 ACGGCAGATGTCCTAGCGTA 60.751 55.000 0.00 0.00 0.00 4.42
415 416 0.750546 TACGGCAGATGTCCTAGCGT 60.751 55.000 0.00 0.00 0.00 5.07
416 417 0.384309 TTACGGCAGATGTCCTAGCG 59.616 55.000 0.00 0.00 0.00 4.26
417 418 1.409427 AGTTACGGCAGATGTCCTAGC 59.591 52.381 0.00 0.00 0.00 3.42
418 419 5.455056 AATAGTTACGGCAGATGTCCTAG 57.545 43.478 0.00 0.00 0.00 3.02
419 420 4.280174 GGAATAGTTACGGCAGATGTCCTA 59.720 45.833 0.00 0.00 0.00 2.94
420 421 3.069729 GGAATAGTTACGGCAGATGTCCT 59.930 47.826 0.00 0.00 0.00 3.85
421 422 3.181469 TGGAATAGTTACGGCAGATGTCC 60.181 47.826 0.00 0.00 0.00 4.02
422 423 4.054780 TGGAATAGTTACGGCAGATGTC 57.945 45.455 0.00 0.00 0.00 3.06
423 424 4.100963 TCATGGAATAGTTACGGCAGATGT 59.899 41.667 0.00 0.00 0.00 3.06
424 425 4.449068 GTCATGGAATAGTTACGGCAGATG 59.551 45.833 0.00 0.00 0.00 2.90
425 426 4.100963 TGTCATGGAATAGTTACGGCAGAT 59.899 41.667 0.00 0.00 0.00 2.90
426 427 3.449377 TGTCATGGAATAGTTACGGCAGA 59.551 43.478 0.00 0.00 0.00 4.26
427 428 3.792401 TGTCATGGAATAGTTACGGCAG 58.208 45.455 0.00 0.00 0.00 4.85
428 429 3.897141 TGTCATGGAATAGTTACGGCA 57.103 42.857 0.00 0.00 0.00 5.69
429 430 5.751243 AATTGTCATGGAATAGTTACGGC 57.249 39.130 0.00 0.00 0.00 5.68
430 431 5.971202 GCAAATTGTCATGGAATAGTTACGG 59.029 40.000 0.00 0.00 0.00 4.02
431 432 6.785191 AGCAAATTGTCATGGAATAGTTACG 58.215 36.000 0.00 0.00 0.00 3.18
432 433 7.702348 GGAAGCAAATTGTCATGGAATAGTTAC 59.298 37.037 0.00 0.00 0.00 2.50
433 434 7.415095 CGGAAGCAAATTGTCATGGAATAGTTA 60.415 37.037 0.00 0.00 0.00 2.24
434 435 6.625740 CGGAAGCAAATTGTCATGGAATAGTT 60.626 38.462 0.00 0.00 0.00 2.24
435 436 5.163622 CGGAAGCAAATTGTCATGGAATAGT 60.164 40.000 0.00 0.00 0.00 2.12
436 437 5.163622 ACGGAAGCAAATTGTCATGGAATAG 60.164 40.000 0.00 0.00 0.00 1.73
437 438 4.704540 ACGGAAGCAAATTGTCATGGAATA 59.295 37.500 0.00 0.00 0.00 1.75
438 439 3.511146 ACGGAAGCAAATTGTCATGGAAT 59.489 39.130 0.00 0.00 0.00 3.01
439 440 2.890311 ACGGAAGCAAATTGTCATGGAA 59.110 40.909 0.00 0.00 0.00 3.53
440 441 2.513753 ACGGAAGCAAATTGTCATGGA 58.486 42.857 0.00 0.00 0.00 3.41
441 442 3.244976 GAACGGAAGCAAATTGTCATGG 58.755 45.455 0.00 0.00 0.00 3.66
442 443 2.910482 CGAACGGAAGCAAATTGTCATG 59.090 45.455 0.00 0.00 0.00 3.07
443 444 2.811431 TCGAACGGAAGCAAATTGTCAT 59.189 40.909 0.00 0.00 0.00 3.06
444 445 2.214347 TCGAACGGAAGCAAATTGTCA 58.786 42.857 0.00 0.00 0.00 3.58
445 446 2.478894 TCTCGAACGGAAGCAAATTGTC 59.521 45.455 0.00 0.00 0.00 3.18
446 447 2.489971 TCTCGAACGGAAGCAAATTGT 58.510 42.857 0.00 0.00 0.00 2.71
447 448 3.536158 TTCTCGAACGGAAGCAAATTG 57.464 42.857 0.00 0.00 0.00 2.32
448 449 4.561735 TTTTCTCGAACGGAAGCAAATT 57.438 36.364 0.00 0.00 0.00 1.82
455 456 6.702723 TCAAATACTCTTTTTCTCGAACGGAA 59.297 34.615 0.00 0.00 0.00 4.30
550 551 7.612668 AGCTGCATGATGACTTCATATATTC 57.387 36.000 1.02 0.00 43.40 1.75
611 616 5.313712 TCCGGCTGTTTTTAAGAGATTTCT 58.686 37.500 0.00 0.00 34.29 2.52
617 622 5.567138 AATCATCCGGCTGTTTTTAAGAG 57.433 39.130 5.00 0.00 0.00 2.85
646 651 1.160329 GGGTGAGGCGGATGATTTCG 61.160 60.000 0.00 0.00 0.00 3.46
662 667 4.250305 AAGACGTGGCAAGCGGGT 62.250 61.111 0.00 0.00 0.00 5.28
681 686 0.104304 GAGATAACGCGTGGTCCCAT 59.896 55.000 14.98 0.00 0.00 4.00
690 695 0.174845 TTGGACCTGGAGATAACGCG 59.825 55.000 3.53 3.53 0.00 6.01
700 726 3.345808 CACACGCGTTGGACCTGG 61.346 66.667 10.22 0.00 0.00 4.45
714 740 1.819928 ATGCATTTACGAGTGGCACA 58.180 45.000 21.41 0.00 37.30 4.57
785 811 5.176958 CGCCCGTTTAAATCTAGACCTATTG 59.823 44.000 0.00 0.00 0.00 1.90
857 883 6.438741 TGATGGATTAGTTATCAGGAGCTAGG 59.561 42.308 0.00 0.00 34.77 3.02
859 885 7.148000 CGATGATGGATTAGTTATCAGGAGCTA 60.148 40.741 0.00 0.00 34.64 3.32
864 890 6.591834 GGAACGATGATGGATTAGTTATCAGG 59.408 42.308 0.00 0.00 34.64 3.86
866 892 7.303182 AGGAACGATGATGGATTAGTTATCA 57.697 36.000 0.00 0.00 34.77 2.15
867 893 6.814146 GGAGGAACGATGATGGATTAGTTATC 59.186 42.308 0.00 0.00 0.00 1.75
992 1028 1.683943 CACCATGTCCATGATGTCCC 58.316 55.000 8.82 0.00 41.20 4.46
993 1029 1.027357 GCACCATGTCCATGATGTCC 58.973 55.000 8.82 0.00 41.20 4.02
1271 1316 1.878522 CAGTGATCCTGTACGCCGC 60.879 63.158 0.00 0.00 36.37 6.53
1327 1372 2.025793 TGTTGACAACCTTGACCCTGAA 60.026 45.455 15.59 0.00 0.00 3.02
1452 1500 0.473694 AGTGTGGTGAGATGGTGGGA 60.474 55.000 0.00 0.00 0.00 4.37
1570 1636 3.138304 CAAATGACGTCTCCTTCCAACA 58.862 45.455 17.92 0.00 0.00 3.33
1610 1682 0.172578 TACATCGTCAGCGGTTCCAG 59.827 55.000 0.00 0.00 38.89 3.86
1619 1694 4.106197 GCTACAGGAGTTTACATCGTCAG 58.894 47.826 0.00 0.00 0.00 3.51
1642 1717 3.071892 TGCATGTGCTCATCAGGATCATA 59.928 43.478 6.55 0.00 42.66 2.15
1760 1838 3.857383 GCATTGTCGAGTGTGTGAGTACT 60.857 47.826 0.00 0.00 0.00 2.73
1761 1839 2.408704 GCATTGTCGAGTGTGTGAGTAC 59.591 50.000 0.00 0.00 0.00 2.73
1762 1840 2.035321 TGCATTGTCGAGTGTGTGAGTA 59.965 45.455 0.00 0.00 0.00 2.59
1983 2082 2.073816 CGTACTCGTCCTTTTGGCAAT 58.926 47.619 0.00 0.00 40.12 3.56
2010 2109 4.174009 TCTTCGATTTGCCTAGACGAAAG 58.826 43.478 0.00 0.00 41.17 2.62
2119 2218 9.485206 CTCAAGGTTGATTTCATTCTTCAAAAT 57.515 29.630 0.00 0.00 36.46 1.82
2355 2457 2.231716 AACCAAGACAATAAGGGCCC 57.768 50.000 16.46 16.46 0.00 5.80
2419 2521 0.451783 GCTACCATTGAACAAGGGCG 59.548 55.000 16.42 9.98 45.45 6.13
2523 2625 3.628942 CCATCATCCAACATGGTGTGTAG 59.371 47.826 10.47 0.00 41.14 2.74
2564 2666 0.463654 TCAACCACATGGCGCCTATC 60.464 55.000 29.70 0.05 39.32 2.08
2613 2715 5.183713 TCACATTGATCCTCGCTGAATTTTT 59.816 36.000 0.00 0.00 0.00 1.94
2615 2717 4.264253 TCACATTGATCCTCGCTGAATTT 58.736 39.130 0.00 0.00 0.00 1.82
2616 2718 3.875727 CTCACATTGATCCTCGCTGAATT 59.124 43.478 0.00 0.00 0.00 2.17
2617 2719 3.464907 CTCACATTGATCCTCGCTGAAT 58.535 45.455 0.00 0.00 0.00 2.57
2705 2807 2.666272 TTCCACCAGCACCACAAATA 57.334 45.000 0.00 0.00 0.00 1.40
2787 2889 8.314021 ACAAATGAAAAAGGGAATAACAGATCC 58.686 33.333 0.00 0.00 34.85 3.36
2839 2942 4.213270 CAGTCGTTGCAGAATAAAACCAGA 59.787 41.667 0.00 0.00 0.00 3.86
2903 3006 3.484649 CACGTCAATTTATCGGAGTACGG 59.515 47.826 0.00 0.00 44.45 4.02
2911 3014 1.392168 ACACGCCACGTCAATTTATCG 59.608 47.619 0.00 0.00 38.32 2.92
2919 3023 2.337170 CCTACACACGCCACGTCA 59.663 61.111 0.00 0.00 38.32 4.35
2943 3048 6.792326 TCGATTCGCTACTATCTCTTTTTGA 58.208 36.000 0.00 0.00 0.00 2.69
2961 3068 3.428316 GCTCGGGGATAAGATCTCGATTC 60.428 52.174 0.00 0.00 35.66 2.52
2979 3088 3.324993 AGCTTGAAGAAGAAGAAGCTCG 58.675 45.455 0.00 0.00 46.42 5.03
2994 3103 0.772124 ACAGGGGGAGGAAAGCTTGA 60.772 55.000 0.00 0.00 0.00 3.02
3000 3109 1.927371 GGGAATTACAGGGGGAGGAAA 59.073 52.381 0.00 0.00 0.00 3.13
3009 3118 7.130681 AGAGAATTACAGAGGGAATTACAGG 57.869 40.000 0.00 0.00 0.00 4.00
3019 3134 5.725362 AGGTTTCGAAGAGAATTACAGAGG 58.275 41.667 0.00 0.00 38.86 3.69
3048 3185 0.815734 CGAGGGTGTGGTTCGTAGAT 59.184 55.000 0.00 0.00 35.04 1.98
3053 3190 1.014044 CATGACGAGGGTGTGGTTCG 61.014 60.000 0.00 0.00 40.02 3.95
3090 3227 5.049129 GGCTCTGATACCAAATGCTACAATC 60.049 44.000 0.00 0.00 0.00 2.67
3250 3392 0.106335 TTTCTTCGCCGTGGTTACCA 59.894 50.000 0.00 0.00 0.00 3.25
3369 3513 2.437359 CGCCCCTGCCTCTGAAAG 60.437 66.667 0.00 0.00 0.00 2.62
3428 3572 2.805546 GAGGACGACGCATAGCCA 59.194 61.111 0.00 0.00 0.00 4.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.