Multiple sequence alignment - TraesCS1B01G454500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G454500 chr1B 100.000 3894 0 0 1 3894 670157940 670161833 0.000000e+00 7191.0
1 TraesCS1B01G454500 chr1B 86.007 1758 202 21 1161 2894 669922764 669924501 0.000000e+00 1844.0
2 TraesCS1B01G454500 chr1B 81.528 1126 167 31 1157 2266 670142833 670143933 0.000000e+00 889.0
3 TraesCS1B01G454500 chr1B 83.916 429 38 13 391 799 670139334 670138917 7.900000e-102 381.0
4 TraesCS1B01G454500 chr1B 92.576 229 17 0 2270 2498 670149475 670149703 2.900000e-86 329.0
5 TraesCS1B01G454500 chr1D 87.162 2368 202 56 662 2980 481454200 481451886 0.000000e+00 2595.0
6 TraesCS1B01G454500 chr1D 85.557 1821 202 29 1161 2949 481550717 481552508 0.000000e+00 1849.0
7 TraesCS1B01G454500 chr1D 82.192 1387 197 35 1129 2501 481501657 481500307 0.000000e+00 1147.0
8 TraesCS1B01G454500 chr1D 86.965 537 56 11 3360 3894 58931576 58931052 3.350000e-165 592.0
9 TraesCS1B01G454500 chr1D 90.094 424 36 3 245 662 481454658 481454235 2.650000e-151 545.0
10 TraesCS1B01G454500 chr1D 86.555 238 30 2 2260 2496 481488935 481488699 1.070000e-65 261.0
11 TraesCS1B01G454500 chr1D 86.813 182 19 4 662 839 481550187 481550367 8.530000e-47 198.0
12 TraesCS1B01G454500 chr1D 88.636 132 15 0 4 135 491070521 491070652 1.120000e-35 161.0
13 TraesCS1B01G454500 chr1D 85.714 119 13 2 423 537 481549347 481549465 5.280000e-24 122.0
14 TraesCS1B01G454500 chr1D 83.898 118 18 1 1232 1349 481489247 481489131 1.140000e-20 111.0
15 TraesCS1B01G454500 chr1A 85.479 1818 204 25 1161 2949 577985496 577987282 0.000000e+00 1840.0
16 TraesCS1B01G454500 chr1A 82.439 1361 193 31 1157 2503 578208267 578206939 0.000000e+00 1147.0
17 TraesCS1B01G454500 chr1A 82.895 456 48 10 2500 2952 578206863 578206435 2.200000e-102 383.0
18 TraesCS1B01G454500 chr1A 77.863 131 10 11 429 552 578209143 578209025 3.250000e-06 63.9
19 TraesCS1B01G454500 chr5D 87.151 537 57 10 3360 3894 434943754 434944280 2.000000e-167 599.0
20 TraesCS1B01G454500 chr3D 87.151 537 55 12 3360 3894 593604797 593604273 7.200000e-167 597.0
21 TraesCS1B01G454500 chr3D 86.965 537 58 10 3360 3894 48055150 48055676 9.320000e-166 593.0
22 TraesCS1B01G454500 chr3D 86.965 537 58 10 3360 3894 48096544 48096018 9.320000e-166 593.0
23 TraesCS1B01G454500 chr3D 88.372 129 15 0 10 138 558680535 558680407 5.210000e-34 156.0
24 TraesCS1B01G454500 chr7D 86.965 537 58 11 3360 3894 160920834 160921360 9.320000e-166 593.0
25 TraesCS1B01G454500 chr6D 86.965 537 57 11 3360 3894 464459839 464459314 3.350000e-165 592.0
26 TraesCS1B01G454500 chr6D 87.402 127 16 0 7 133 286001892 286002018 3.140000e-31 147.0
27 TraesCS1B01G454500 chr2D 86.965 537 56 11 3360 3894 25665442 25665966 3.350000e-165 592.0
28 TraesCS1B01G454500 chr6A 86.542 535 59 12 3362 3894 336254080 336253557 9.380000e-161 577.0
29 TraesCS1B01G454500 chr7B 79.644 393 63 10 2080 2468 520417452 520417831 2.310000e-67 267.0
30 TraesCS1B01G454500 chr7B 81.498 227 39 3 2501 2727 520417958 520418181 2.390000e-42 183.0
31 TraesCS1B01G454500 chr7B 90.152 132 13 0 4 135 316359949 316360080 5.170000e-39 172.0
32 TraesCS1B01G454500 chr3B 92.920 113 8 0 23 135 479886918 479887030 8.660000e-37 165.0
33 TraesCS1B01G454500 chr3B 91.964 112 9 0 24 135 71792539 71792650 1.450000e-34 158.0
34 TraesCS1B01G454500 chr6B 89.683 126 13 0 10 135 223248963 223248838 1.120000e-35 161.0
35 TraesCS1B01G454500 chr5B 88.636 132 15 0 4 135 575036494 575036625 1.120000e-35 161.0
36 TraesCS1B01G454500 chr5B 92.035 113 9 0 23 135 659537359 659537247 4.030000e-35 159.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G454500 chr1B 670157940 670161833 3893 False 7191.0 7191 100.000000 1 3894 1 chr1B.!!$F4 3893
1 TraesCS1B01G454500 chr1B 669922764 669924501 1737 False 1844.0 1844 86.007000 1161 2894 1 chr1B.!!$F1 1733
2 TraesCS1B01G454500 chr1B 670142833 670143933 1100 False 889.0 889 81.528000 1157 2266 1 chr1B.!!$F2 1109
3 TraesCS1B01G454500 chr1D 481451886 481454658 2772 True 1570.0 2595 88.628000 245 2980 2 chr1D.!!$R3 2735
4 TraesCS1B01G454500 chr1D 481500307 481501657 1350 True 1147.0 1147 82.192000 1129 2501 1 chr1D.!!$R2 1372
5 TraesCS1B01G454500 chr1D 481549347 481552508 3161 False 723.0 1849 86.028000 423 2949 3 chr1D.!!$F2 2526
6 TraesCS1B01G454500 chr1D 58931052 58931576 524 True 592.0 592 86.965000 3360 3894 1 chr1D.!!$R1 534
7 TraesCS1B01G454500 chr1A 577985496 577987282 1786 False 1840.0 1840 85.479000 1161 2949 1 chr1A.!!$F1 1788
8 TraesCS1B01G454500 chr1A 578206435 578209143 2708 True 531.3 1147 81.065667 429 2952 3 chr1A.!!$R1 2523
9 TraesCS1B01G454500 chr5D 434943754 434944280 526 False 599.0 599 87.151000 3360 3894 1 chr5D.!!$F1 534
10 TraesCS1B01G454500 chr3D 593604273 593604797 524 True 597.0 597 87.151000 3360 3894 1 chr3D.!!$R3 534
11 TraesCS1B01G454500 chr3D 48055150 48055676 526 False 593.0 593 86.965000 3360 3894 1 chr3D.!!$F1 534
12 TraesCS1B01G454500 chr3D 48096018 48096544 526 True 593.0 593 86.965000 3360 3894 1 chr3D.!!$R1 534
13 TraesCS1B01G454500 chr7D 160920834 160921360 526 False 593.0 593 86.965000 3360 3894 1 chr7D.!!$F1 534
14 TraesCS1B01G454500 chr6D 464459314 464459839 525 True 592.0 592 86.965000 3360 3894 1 chr6D.!!$R1 534
15 TraesCS1B01G454500 chr2D 25665442 25665966 524 False 592.0 592 86.965000 3360 3894 1 chr2D.!!$F1 534
16 TraesCS1B01G454500 chr6A 336253557 336254080 523 True 577.0 577 86.542000 3362 3894 1 chr6A.!!$R1 532
17 TraesCS1B01G454500 chr7B 520417452 520418181 729 False 225.0 267 80.571000 2080 2727 2 chr7B.!!$F2 647


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
152 153 0.035739 TTGCCCGGTGGTAAGTTCTC 59.964 55.0 0.00 0.00 31.96 2.87 F
154 155 0.035739 GCCCGGTGGTAAGTTCTCAA 59.964 55.0 0.00 0.00 0.00 3.02 F
1690 2533 0.251077 ACAGACCGGTTCGTACCTCT 60.251 55.0 9.42 3.53 42.66 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1918 2761 0.032130 TCTGAAACTCGCGCTTCTGT 59.968 50.0 5.56 0.0 0.00 3.41 R
1960 2803 0.034477 GGGGTTCCCACGTCATGATT 60.034 55.0 10.25 0.0 44.65 2.57 R
3031 4117 0.185901 AGACACAAGGTTGGCATGGT 59.814 50.0 0.00 0.0 0.00 3.55 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.921119 TGCATTAGTTGAAAGTGCAGG 57.079 42.857 0.00 0.00 40.51 4.85
23 24 3.485394 TGCATTAGTTGAAAGTGCAGGA 58.515 40.909 0.00 0.00 40.51 3.86
24 25 4.081406 TGCATTAGTTGAAAGTGCAGGAT 58.919 39.130 0.00 0.00 40.51 3.24
25 26 4.156556 TGCATTAGTTGAAAGTGCAGGATC 59.843 41.667 0.00 0.00 40.51 3.36
26 27 4.156556 GCATTAGTTGAAAGTGCAGGATCA 59.843 41.667 0.00 0.00 35.93 2.92
27 28 5.163581 GCATTAGTTGAAAGTGCAGGATCAT 60.164 40.000 0.00 0.00 35.93 2.45
28 29 5.885230 TTAGTTGAAAGTGCAGGATCATG 57.115 39.130 2.22 2.22 0.00 3.07
29 30 3.759581 AGTTGAAAGTGCAGGATCATGT 58.240 40.909 9.42 0.00 0.00 3.21
30 31 3.504906 AGTTGAAAGTGCAGGATCATGTG 59.495 43.478 9.42 0.00 0.00 3.21
31 32 1.814394 TGAAAGTGCAGGATCATGTGC 59.186 47.619 9.42 8.01 40.29 4.57
37 38 3.286329 TGCAGGATCATGTGCATAGTT 57.714 42.857 9.42 0.00 44.70 2.24
38 39 2.946990 TGCAGGATCATGTGCATAGTTG 59.053 45.455 9.42 0.00 44.70 3.16
39 40 3.208594 GCAGGATCATGTGCATAGTTGA 58.791 45.455 9.42 0.00 39.62 3.18
40 41 3.628942 GCAGGATCATGTGCATAGTTGAA 59.371 43.478 9.42 0.00 39.62 2.69
41 42 4.096833 GCAGGATCATGTGCATAGTTGAAA 59.903 41.667 9.42 0.00 39.62 2.69
42 43 5.575957 CAGGATCATGTGCATAGTTGAAAC 58.424 41.667 0.00 0.00 0.00 2.78
43 44 5.124297 CAGGATCATGTGCATAGTTGAAACA 59.876 40.000 0.00 0.00 0.00 2.83
44 45 5.124457 AGGATCATGTGCATAGTTGAAACAC 59.876 40.000 0.00 0.00 0.00 3.32
45 46 5.106197 GGATCATGTGCATAGTTGAAACACA 60.106 40.000 0.00 0.00 44.56 3.72
46 47 5.107109 TCATGTGCATAGTTGAAACACAC 57.893 39.130 0.00 0.00 43.39 3.82
47 48 4.578105 TCATGTGCATAGTTGAAACACACA 59.422 37.500 11.24 11.24 43.39 3.72
48 49 4.972514 TGTGCATAGTTGAAACACACAA 57.027 36.364 0.00 0.00 36.39 3.33
49 50 5.316327 TGTGCATAGTTGAAACACACAAA 57.684 34.783 0.00 0.00 36.39 2.83
50 51 5.714047 TGTGCATAGTTGAAACACACAAAA 58.286 33.333 0.00 0.00 36.39 2.44
51 52 6.159293 TGTGCATAGTTGAAACACACAAAAA 58.841 32.000 0.00 0.00 36.39 1.94
69 70 3.351794 AAAATCTTCTCCCTTCCGTCC 57.648 47.619 0.00 0.00 0.00 4.79
70 71 1.952621 AATCTTCTCCCTTCCGTCCA 58.047 50.000 0.00 0.00 0.00 4.02
71 72 2.182516 ATCTTCTCCCTTCCGTCCAT 57.817 50.000 0.00 0.00 0.00 3.41
72 73 1.195115 TCTTCTCCCTTCCGTCCATG 58.805 55.000 0.00 0.00 0.00 3.66
73 74 1.195115 CTTCTCCCTTCCGTCCATGA 58.805 55.000 0.00 0.00 0.00 3.07
74 75 0.902531 TTCTCCCTTCCGTCCATGAC 59.097 55.000 0.00 0.00 0.00 3.06
75 76 0.041238 TCTCCCTTCCGTCCATGACT 59.959 55.000 0.00 0.00 0.00 3.41
76 77 0.905357 CTCCCTTCCGTCCATGACTT 59.095 55.000 0.00 0.00 0.00 3.01
77 78 0.902531 TCCCTTCCGTCCATGACTTC 59.097 55.000 0.00 0.00 0.00 3.01
78 79 0.905357 CCCTTCCGTCCATGACTTCT 59.095 55.000 0.00 0.00 0.00 2.85
79 80 1.279271 CCCTTCCGTCCATGACTTCTT 59.721 52.381 0.00 0.00 0.00 2.52
80 81 2.622436 CCTTCCGTCCATGACTTCTTC 58.378 52.381 0.00 0.00 0.00 2.87
81 82 2.622436 CTTCCGTCCATGACTTCTTCC 58.378 52.381 0.00 0.00 0.00 3.46
82 83 0.530744 TCCGTCCATGACTTCTTCCG 59.469 55.000 0.00 0.00 0.00 4.30
83 84 0.460284 CCGTCCATGACTTCTTCCGG 60.460 60.000 0.00 0.00 0.00 5.14
84 85 0.246635 CGTCCATGACTTCTTCCGGT 59.753 55.000 0.00 0.00 0.00 5.28
85 86 1.736032 CGTCCATGACTTCTTCCGGTC 60.736 57.143 0.00 0.00 0.00 4.79
86 87 0.530744 TCCATGACTTCTTCCGGTCG 59.469 55.000 0.00 0.00 35.45 4.79
87 88 0.460284 CCATGACTTCTTCCGGTCGG 60.460 60.000 0.00 2.52 35.45 4.79
88 89 0.246635 CATGACTTCTTCCGGTCGGT 59.753 55.000 9.36 0.00 35.45 4.69
89 90 0.246635 ATGACTTCTTCCGGTCGGTG 59.753 55.000 9.36 4.36 35.45 4.94
90 91 1.080025 GACTTCTTCCGGTCGGTGG 60.080 63.158 9.36 4.03 36.47 4.61
91 92 1.530013 GACTTCTTCCGGTCGGTGGA 61.530 60.000 9.36 6.20 36.47 4.02
92 93 1.080025 CTTCTTCCGGTCGGTGGAC 60.080 63.158 9.36 0.00 42.66 4.02
93 94 1.812686 CTTCTTCCGGTCGGTGGACA 61.813 60.000 9.36 0.00 45.28 4.02
94 95 1.189524 TTCTTCCGGTCGGTGGACAT 61.190 55.000 9.36 0.00 45.28 3.06
95 96 1.153628 CTTCCGGTCGGTGGACATC 60.154 63.158 9.36 0.00 45.28 3.06
96 97 1.605058 CTTCCGGTCGGTGGACATCT 61.605 60.000 9.36 0.00 45.28 2.90
97 98 1.189524 TTCCGGTCGGTGGACATCTT 61.190 55.000 9.36 0.00 45.28 2.40
98 99 1.153628 CCGGTCGGTGGACATCTTC 60.154 63.158 0.55 0.00 45.28 2.87
99 100 1.589630 CGGTCGGTGGACATCTTCA 59.410 57.895 0.00 0.00 45.28 3.02
100 101 0.736325 CGGTCGGTGGACATCTTCAC 60.736 60.000 0.00 0.00 45.28 3.18
101 102 0.320374 GGTCGGTGGACATCTTCACA 59.680 55.000 0.00 0.00 45.28 3.58
102 103 1.066143 GGTCGGTGGACATCTTCACAT 60.066 52.381 0.00 0.00 45.28 3.21
103 104 2.615493 GGTCGGTGGACATCTTCACATT 60.615 50.000 0.00 0.00 45.28 2.71
104 105 2.416547 GTCGGTGGACATCTTCACATTG 59.583 50.000 0.00 0.00 42.91 2.82
105 106 1.131126 CGGTGGACATCTTCACATTGC 59.869 52.381 0.00 0.00 35.74 3.56
106 107 2.161855 GGTGGACATCTTCACATTGCA 58.838 47.619 0.00 0.00 35.74 4.08
107 108 2.557924 GGTGGACATCTTCACATTGCAA 59.442 45.455 0.00 0.00 35.74 4.08
108 109 3.005684 GGTGGACATCTTCACATTGCAAA 59.994 43.478 1.71 0.00 35.74 3.68
109 110 3.983344 GTGGACATCTTCACATTGCAAAC 59.017 43.478 1.71 0.00 34.32 2.93
110 111 3.635836 TGGACATCTTCACATTGCAAACA 59.364 39.130 1.71 0.00 0.00 2.83
111 112 4.281435 TGGACATCTTCACATTGCAAACAT 59.719 37.500 1.71 0.00 0.00 2.71
112 113 4.860907 GGACATCTTCACATTGCAAACATC 59.139 41.667 1.71 0.00 0.00 3.06
113 114 5.336213 GGACATCTTCACATTGCAAACATCT 60.336 40.000 1.71 0.00 0.00 2.90
114 115 5.706916 ACATCTTCACATTGCAAACATCTC 58.293 37.500 1.71 0.00 0.00 2.75
115 116 4.771590 TCTTCACATTGCAAACATCTCC 57.228 40.909 1.71 0.00 0.00 3.71
116 117 4.143543 TCTTCACATTGCAAACATCTCCA 58.856 39.130 1.71 0.00 0.00 3.86
117 118 3.921119 TCACATTGCAAACATCTCCAC 57.079 42.857 1.71 0.00 0.00 4.02
118 119 3.220940 TCACATTGCAAACATCTCCACA 58.779 40.909 1.71 0.00 0.00 4.17
119 120 3.635836 TCACATTGCAAACATCTCCACAA 59.364 39.130 1.71 0.00 0.00 3.33
120 121 3.737266 CACATTGCAAACATCTCCACAAC 59.263 43.478 1.71 0.00 0.00 3.32
121 122 3.384146 ACATTGCAAACATCTCCACAACA 59.616 39.130 1.71 0.00 0.00 3.33
122 123 4.141981 ACATTGCAAACATCTCCACAACAA 60.142 37.500 1.71 0.00 0.00 2.83
123 124 3.435105 TGCAAACATCTCCACAACAAC 57.565 42.857 0.00 0.00 0.00 3.32
124 125 2.757314 TGCAAACATCTCCACAACAACA 59.243 40.909 0.00 0.00 0.00 3.33
125 126 3.384146 TGCAAACATCTCCACAACAACAT 59.616 39.130 0.00 0.00 0.00 2.71
126 127 3.737266 GCAAACATCTCCACAACAACATG 59.263 43.478 0.00 0.00 0.00 3.21
127 128 4.300803 CAAACATCTCCACAACAACATGG 58.699 43.478 0.00 0.00 37.32 3.66
128 129 3.228188 ACATCTCCACAACAACATGGT 57.772 42.857 0.00 0.00 37.27 3.55
129 130 2.886523 ACATCTCCACAACAACATGGTG 59.113 45.455 9.83 9.83 41.80 4.17
133 134 2.819477 CACAACAACATGGTGGGGT 58.181 52.632 16.70 9.75 39.97 4.95
134 135 1.118838 CACAACAACATGGTGGGGTT 58.881 50.000 16.70 0.00 39.97 4.11
136 137 0.249826 CAACAACATGGTGGGGTTGC 60.250 55.000 16.70 0.00 46.31 4.17
137 138 1.406860 AACAACATGGTGGGGTTGCC 61.407 55.000 16.70 0.00 46.31 4.52
138 139 2.203773 AACATGGTGGGGTTGCCC 60.204 61.111 0.00 0.00 44.51 5.36
139 140 4.676951 ACATGGTGGGGTTGCCCG 62.677 66.667 0.00 0.00 46.66 6.13
146 147 3.969119 GGGGTTGCCCGGTGGTAA 61.969 66.667 0.00 0.00 46.66 2.85
147 148 2.360726 GGGTTGCCCGGTGGTAAG 60.361 66.667 0.00 0.00 36.87 2.34
148 149 2.433004 GGTTGCCCGGTGGTAAGT 59.567 61.111 0.00 0.00 36.87 2.24
149 150 1.228337 GGTTGCCCGGTGGTAAGTT 60.228 57.895 0.00 0.00 36.87 2.66
150 151 1.239296 GGTTGCCCGGTGGTAAGTTC 61.239 60.000 0.00 0.00 36.87 3.01
151 152 0.250597 GTTGCCCGGTGGTAAGTTCT 60.251 55.000 0.00 0.00 36.87 3.01
152 153 0.035739 TTGCCCGGTGGTAAGTTCTC 59.964 55.000 0.00 0.00 31.96 2.87
153 154 1.122632 TGCCCGGTGGTAAGTTCTCA 61.123 55.000 0.00 0.00 0.00 3.27
154 155 0.035739 GCCCGGTGGTAAGTTCTCAA 59.964 55.000 0.00 0.00 0.00 3.02
155 156 1.543871 GCCCGGTGGTAAGTTCTCAAA 60.544 52.381 0.00 0.00 0.00 2.69
156 157 2.878526 GCCCGGTGGTAAGTTCTCAAAT 60.879 50.000 0.00 0.00 0.00 2.32
157 158 3.620472 GCCCGGTGGTAAGTTCTCAAATA 60.620 47.826 0.00 0.00 0.00 1.40
158 159 4.189231 CCCGGTGGTAAGTTCTCAAATAG 58.811 47.826 0.00 0.00 0.00 1.73
159 160 3.621715 CCGGTGGTAAGTTCTCAAATAGC 59.378 47.826 0.00 0.00 0.00 2.97
160 161 3.621715 CGGTGGTAAGTTCTCAAATAGCC 59.378 47.826 0.00 0.00 0.00 3.93
161 162 3.621715 GGTGGTAAGTTCTCAAATAGCCG 59.378 47.826 0.00 0.00 0.00 5.52
162 163 3.063588 GTGGTAAGTTCTCAAATAGCCGC 59.936 47.826 0.00 0.00 0.00 6.53
163 164 3.055385 TGGTAAGTTCTCAAATAGCCGCT 60.055 43.478 0.00 0.00 0.00 5.52
164 165 4.160814 TGGTAAGTTCTCAAATAGCCGCTA 59.839 41.667 1.73 1.73 0.00 4.26
165 166 4.745620 GGTAAGTTCTCAAATAGCCGCTAG 59.254 45.833 6.23 0.00 0.00 3.42
166 167 4.737855 AAGTTCTCAAATAGCCGCTAGA 57.262 40.909 6.23 0.00 0.00 2.43
167 168 4.314740 AGTTCTCAAATAGCCGCTAGAG 57.685 45.455 6.23 7.42 0.00 2.43
168 169 2.797719 GTTCTCAAATAGCCGCTAGAGC 59.202 50.000 6.23 0.00 37.78 4.09
169 170 2.031870 TCTCAAATAGCCGCTAGAGCA 58.968 47.619 6.23 0.00 42.21 4.26
170 171 2.131183 CTCAAATAGCCGCTAGAGCAC 58.869 52.381 6.23 0.00 42.21 4.40
171 172 1.202533 TCAAATAGCCGCTAGAGCACC 60.203 52.381 6.23 0.00 42.21 5.01
172 173 0.830648 AAATAGCCGCTAGAGCACCA 59.169 50.000 6.23 0.00 42.21 4.17
173 174 0.830648 AATAGCCGCTAGAGCACCAA 59.169 50.000 6.23 0.00 42.21 3.67
174 175 0.390860 ATAGCCGCTAGAGCACCAAG 59.609 55.000 6.23 0.00 42.21 3.61
175 176 2.298158 TAGCCGCTAGAGCACCAAGC 62.298 60.000 7.80 0.00 46.19 4.01
204 205 4.735132 CGGCCAGGCGAACTCGAA 62.735 66.667 8.02 0.00 43.02 3.71
205 206 2.815647 GGCCAGGCGAACTCGAAG 60.816 66.667 5.00 0.00 43.02 3.79
206 207 3.491652 GCCAGGCGAACTCGAAGC 61.492 66.667 2.69 0.00 43.02 3.86
207 208 2.048222 CCAGGCGAACTCGAAGCA 60.048 61.111 2.69 0.00 43.02 3.91
208 209 1.667830 CCAGGCGAACTCGAAGCAA 60.668 57.895 2.69 0.00 43.02 3.91
209 210 1.630244 CCAGGCGAACTCGAAGCAAG 61.630 60.000 2.69 0.00 43.02 4.01
210 211 1.374758 AGGCGAACTCGAAGCAAGG 60.375 57.895 2.69 0.00 43.02 3.61
211 212 2.476499 GCGAACTCGAAGCAAGGC 59.524 61.111 2.69 0.00 43.02 4.35
212 213 2.029844 GCGAACTCGAAGCAAGGCT 61.030 57.895 2.69 0.00 43.02 4.58
213 214 1.960994 GCGAACTCGAAGCAAGGCTC 61.961 60.000 2.69 0.00 43.02 4.70
214 215 0.389166 CGAACTCGAAGCAAGGCTCT 60.389 55.000 0.00 0.00 38.25 4.09
215 216 1.355005 GAACTCGAAGCAAGGCTCTC 58.645 55.000 0.00 0.00 38.25 3.20
216 217 0.389166 AACTCGAAGCAAGGCTCTCG 60.389 55.000 13.00 13.00 38.25 4.04
217 218 1.518133 CTCGAAGCAAGGCTCTCGG 60.518 63.158 16.60 8.58 38.25 4.63
218 219 3.191539 CGAAGCAAGGCTCTCGGC 61.192 66.667 11.98 0.00 38.25 5.54
227 228 4.087892 GCTCTCGGCCCTCTGCAA 62.088 66.667 0.00 0.00 43.89 4.08
228 229 2.125350 CTCTCGGCCCTCTGCAAC 60.125 66.667 0.00 0.00 43.89 4.17
229 230 3.672295 CTCTCGGCCCTCTGCAACC 62.672 68.421 0.00 0.00 43.89 3.77
234 235 4.329545 GCCCTCTGCAACCGTCCA 62.330 66.667 0.00 0.00 40.77 4.02
235 236 2.429930 CCCTCTGCAACCGTCCAA 59.570 61.111 0.00 0.00 0.00 3.53
236 237 1.966451 CCCTCTGCAACCGTCCAAC 60.966 63.158 0.00 0.00 0.00 3.77
237 238 1.071471 CCTCTGCAACCGTCCAACT 59.929 57.895 0.00 0.00 0.00 3.16
238 239 0.320374 CCTCTGCAACCGTCCAACTA 59.680 55.000 0.00 0.00 0.00 2.24
239 240 1.066143 CCTCTGCAACCGTCCAACTAT 60.066 52.381 0.00 0.00 0.00 2.12
240 241 2.002586 CTCTGCAACCGTCCAACTATG 58.997 52.381 0.00 0.00 0.00 2.23
241 242 1.621317 TCTGCAACCGTCCAACTATGA 59.379 47.619 0.00 0.00 0.00 2.15
242 243 2.037902 TCTGCAACCGTCCAACTATGAA 59.962 45.455 0.00 0.00 0.00 2.57
243 244 2.147958 TGCAACCGTCCAACTATGAAC 58.852 47.619 0.00 0.00 0.00 3.18
249 250 6.482308 GCAACCGTCCAACTATGAACTATTAT 59.518 38.462 0.00 0.00 0.00 1.28
293 294 0.622136 ATGCAGCAGGGAATGAGACA 59.378 50.000 0.00 0.00 0.00 3.41
298 299 3.252701 GCAGCAGGGAATGAGACAATATG 59.747 47.826 0.00 0.00 0.00 1.78
345 346 2.444624 CGGGACACACGATCGCAAG 61.445 63.158 16.60 8.18 0.00 4.01
355 356 1.595794 ACGATCGCAAGTGACGTTTTT 59.404 42.857 16.60 0.00 37.89 1.94
360 361 4.383774 TCGCAAGTGACGTTTTTCTATG 57.616 40.909 0.00 0.00 39.48 2.23
361 362 3.185594 TCGCAAGTGACGTTTTTCTATGG 59.814 43.478 0.00 0.00 39.48 2.74
363 364 3.252458 GCAAGTGACGTTTTTCTATGGGT 59.748 43.478 0.00 0.00 0.00 4.51
370 371 5.177725 ACGTTTTTCTATGGGTGACAAAC 57.822 39.130 0.00 0.00 33.38 2.93
371 372 4.885325 ACGTTTTTCTATGGGTGACAAACT 59.115 37.500 0.00 0.00 34.09 2.66
387 388 5.177511 TGACAAACTTCATGAATGAGACGAC 59.822 40.000 8.96 0.00 38.19 4.34
389 390 5.050091 ACAAACTTCATGAATGAGACGACAC 60.050 40.000 8.96 0.00 38.19 3.67
399 400 3.343421 GACGACACACCGGGCAAC 61.343 66.667 6.32 0.00 0.00 4.17
401 402 3.345808 CGACACACCGGGCAACTG 61.346 66.667 6.32 0.00 45.15 3.16
414 415 3.175710 AACTGGGGAAGCACGGGT 61.176 61.111 0.00 0.00 0.00 5.28
418 419 4.410400 GGGGAAGCACGGGTCAGG 62.410 72.222 0.00 0.00 0.00 3.86
593 603 0.622665 AAGAGCATGGGGTTCTCTGG 59.377 55.000 0.00 0.00 35.85 3.86
609 1109 1.396653 CTGGGTTTGATCCAGGCATC 58.603 55.000 0.00 0.00 45.95 3.91
610 1110 0.703488 TGGGTTTGATCCAGGCATCA 59.297 50.000 0.00 0.00 0.00 3.07
612 1112 2.513317 TGGGTTTGATCCAGGCATCATA 59.487 45.455 3.28 0.00 32.69 2.15
613 1113 3.140707 TGGGTTTGATCCAGGCATCATAT 59.859 43.478 3.28 0.00 32.69 1.78
740 1408 3.932710 GCATGTCTCTTCGGTGTATCAAA 59.067 43.478 0.00 0.00 0.00 2.69
751 1419 0.828022 TGTATCAAAGGCGTCCCGAT 59.172 50.000 0.00 0.00 35.76 4.18
903 1622 5.726397 TCTCCATGTTTTTAAGCTAGCGTA 58.274 37.500 9.55 7.82 0.00 4.42
904 1623 5.579511 TCTCCATGTTTTTAAGCTAGCGTAC 59.420 40.000 10.06 2.19 0.00 3.67
905 1624 4.327898 TCCATGTTTTTAAGCTAGCGTACG 59.672 41.667 11.84 11.84 0.00 3.67
906 1625 4.092383 CCATGTTTTTAAGCTAGCGTACGT 59.908 41.667 17.90 6.37 0.00 3.57
907 1626 4.891277 TGTTTTTAAGCTAGCGTACGTC 57.109 40.909 17.90 9.31 0.00 4.34
908 1627 4.549458 TGTTTTTAAGCTAGCGTACGTCT 58.451 39.130 17.90 16.10 0.00 4.18
914 1633 1.504900 CTAGCGTACGTCTGTGCCA 59.495 57.895 17.90 0.00 0.00 4.92
949 1668 2.094659 CGCCCACGATCACTCACAC 61.095 63.158 0.00 0.00 43.93 3.82
951 1670 1.671166 CCCACGATCACTCACACCA 59.329 57.895 0.00 0.00 0.00 4.17
1038 1796 2.499205 CTCCTCGGTGCCGCATTA 59.501 61.111 5.64 0.00 39.59 1.90
1057 1818 1.298014 CCGCTGCTCTTCTCCCTTT 59.702 57.895 0.00 0.00 0.00 3.11
1094 1859 4.096382 AGCCGAGCGTTATGAAATGAAATT 59.904 37.500 0.00 0.00 38.98 1.82
1127 1967 5.175126 CGAGGTTTCATACGTGATAATGACC 59.825 44.000 0.00 0.00 33.56 4.02
1152 1995 5.414360 TGTTTGTTGGTGTACACGTACTAA 58.586 37.500 19.41 17.44 37.00 2.24
1153 1996 6.047870 TGTTTGTTGGTGTACACGTACTAAT 58.952 36.000 19.41 0.00 37.00 1.73
1154 1997 6.538021 TGTTTGTTGGTGTACACGTACTAATT 59.462 34.615 19.41 0.00 37.00 1.40
1155 1998 7.708322 TGTTTGTTGGTGTACACGTACTAATTA 59.292 33.333 19.41 12.04 37.00 1.40
1250 2093 3.016031 TGCAACTGCTCAAGAAGAACAA 58.984 40.909 2.95 0.00 42.66 2.83
1423 2266 1.318158 CGTGAAGGCCTACTACCCGT 61.318 60.000 5.16 0.00 0.00 5.28
1425 2268 0.333993 TGAAGGCCTACTACCCGTCT 59.666 55.000 5.16 0.00 31.93 4.18
1439 2282 0.855349 CCGTCTACGCTGATCAATGC 59.145 55.000 0.00 0.00 38.18 3.56
1479 2322 3.067833 GGTGTTCAAAGAGGCTAGTCAC 58.932 50.000 0.00 0.00 0.00 3.67
1500 2343 1.819288 CTAAACTCTCAGCTCGTCCCA 59.181 52.381 0.00 0.00 0.00 4.37
1641 2484 2.504026 GACGACATCGCGCTGTCA 60.504 61.111 34.03 5.35 44.69 3.58
1650 2493 1.445066 CGCGCTGTCAGTGATGAGT 60.445 57.895 17.65 0.00 0.00 3.41
1657 2500 1.065926 TGTCAGTGATGAGTCCCATGC 60.066 52.381 0.00 0.00 35.17 4.06
1665 2508 0.976641 TGAGTCCCATGCTCGACTTT 59.023 50.000 9.02 0.00 39.44 2.66
1668 2511 2.416893 GAGTCCCATGCTCGACTTTTTC 59.583 50.000 9.02 0.00 39.44 2.29
1670 2513 0.447801 CCCATGCTCGACTTTTTCCG 59.552 55.000 0.00 0.00 0.00 4.30
1690 2533 0.251077 ACAGACCGGTTCGTACCTCT 60.251 55.000 9.42 3.53 42.66 3.69
1691 2534 0.450983 CAGACCGGTTCGTACCTCTC 59.549 60.000 9.42 3.59 42.66 3.20
1699 2542 0.883833 TTCGTACCTCTCGGTGAACC 59.116 55.000 0.00 0.00 45.18 3.62
1737 2580 1.043673 ACCTGAGTACTCCGGGCATC 61.044 60.000 30.03 3.22 38.16 3.91
1764 2607 1.568504 ACTATCTCTTGTTCCGCCCA 58.431 50.000 0.00 0.00 0.00 5.36
1785 2628 3.799755 GCCGGCGTGAATGACACC 61.800 66.667 12.58 0.00 45.73 4.16
1788 2631 2.726691 CGGCGTGAATGACACCGTC 61.727 63.158 0.00 0.00 45.73 4.79
1824 2667 1.600636 CAGCCTCTTTGACGCCCAA 60.601 57.895 0.00 0.00 0.00 4.12
1855 2698 5.683509 GCAGTCTACTATGCAATGGAGAAGT 60.684 44.000 5.90 0.00 42.11 3.01
1872 2715 1.000396 GTTGCCATCCTCCAGCCTT 60.000 57.895 0.00 0.00 0.00 4.35
1906 2749 2.749441 GGAAGCTCACAGCAGGGC 60.749 66.667 0.00 0.00 45.56 5.19
1907 2750 2.749441 GAAGCTCACAGCAGGGCC 60.749 66.667 0.00 0.00 45.56 5.80
1911 2754 3.790437 CTCACAGCAGGGCCCGAT 61.790 66.667 18.44 7.45 0.00 4.18
1912 2755 2.364973 TCACAGCAGGGCCCGATA 60.365 61.111 18.44 0.00 0.00 2.92
1913 2756 1.762522 CTCACAGCAGGGCCCGATAT 61.763 60.000 18.44 0.09 0.00 1.63
1918 2761 0.766674 AGCAGGGCCCGATATAACCA 60.767 55.000 18.44 0.00 0.00 3.67
1923 2766 1.418637 GGGCCCGATATAACCACAGAA 59.581 52.381 5.69 0.00 0.00 3.02
1925 2768 2.143925 GCCCGATATAACCACAGAAGC 58.856 52.381 0.00 0.00 0.00 3.86
1928 2771 1.452025 CGATATAACCACAGAAGCGCG 59.548 52.381 0.00 0.00 0.00 6.86
1929 2772 2.739292 GATATAACCACAGAAGCGCGA 58.261 47.619 12.10 0.00 0.00 5.87
1930 2773 2.203800 TATAACCACAGAAGCGCGAG 57.796 50.000 12.10 0.00 0.00 5.03
1933 2776 0.814010 AACCACAGAAGCGCGAGTTT 60.814 50.000 12.10 0.00 37.19 2.66
1942 2785 2.048222 CGCGAGTTTCAGAGGGCA 60.048 61.111 0.00 0.00 0.00 5.36
1944 2787 1.004440 GCGAGTTTCAGAGGGCAGT 60.004 57.895 0.00 0.00 0.00 4.40
1947 2790 1.671261 CGAGTTTCAGAGGGCAGTCAG 60.671 57.143 0.00 0.00 0.00 3.51
1959 2802 1.455849 CAGTCAGCCAAACCAGGGA 59.544 57.895 0.00 0.00 0.00 4.20
1960 2803 0.178992 CAGTCAGCCAAACCAGGGAA 60.179 55.000 0.00 0.00 0.00 3.97
1962 2805 1.147817 AGTCAGCCAAACCAGGGAAAT 59.852 47.619 0.00 0.00 0.00 2.17
1967 2810 2.178580 GCCAAACCAGGGAAATCATGA 58.821 47.619 0.00 0.00 0.00 3.07
2050 2902 1.270414 TACCCCCGCCGTAAATGGAA 61.270 55.000 0.00 0.00 0.00 3.53
2151 3003 1.205064 CAACGAGAACAGCAAGCCG 59.795 57.895 0.00 0.00 0.00 5.52
2154 3006 3.793144 GAGAACAGCAAGCCGGCG 61.793 66.667 23.20 9.22 39.27 6.46
2480 3358 3.803082 CGCCGGCACCATTGTCAG 61.803 66.667 28.98 0.98 0.00 3.51
2561 3612 2.811101 CGAGGCTCGGCTTCAGAT 59.189 61.111 28.52 0.00 34.22 2.90
2568 3619 2.262774 CTCGGCTTCAGATGGCCCTT 62.263 60.000 0.00 0.00 45.01 3.95
2571 3622 0.106318 GGCTTCAGATGGCCCTTGAT 60.106 55.000 0.00 0.00 42.30 2.57
2583 3634 2.701006 CTTGATTACGCGTGCGGG 59.299 61.111 24.59 10.80 44.69 6.13
2760 3811 1.328279 GGCAGGCACCAAGTAAGTTT 58.672 50.000 0.00 0.00 0.00 2.66
2766 3819 2.604614 GGCACCAAGTAAGTTTTGCTCG 60.605 50.000 0.00 0.00 0.00 5.03
2767 3820 2.032924 GCACCAAGTAAGTTTTGCTCGT 59.967 45.455 0.00 0.00 0.00 4.18
2774 3827 6.293735 CCAAGTAAGTTTTGCTCGTAATTCCA 60.294 38.462 0.00 0.00 0.00 3.53
2777 3834 5.613358 AAGTTTTGCTCGTAATTCCAGAG 57.387 39.130 0.00 0.00 35.28 3.35
2805 3870 7.679659 AGTTTCAAGAAAAGAAAATGTACGC 57.320 32.000 0.00 0.00 36.80 4.42
2806 3871 6.695713 AGTTTCAAGAAAAGAAAATGTACGCC 59.304 34.615 0.00 0.00 36.80 5.68
2831 3897 5.699915 TCGGTTTGTTAATGGTGATTTCGTA 59.300 36.000 0.00 0.00 0.00 3.43
2832 3898 5.791480 CGGTTTGTTAATGGTGATTTCGTAC 59.209 40.000 0.00 0.00 0.00 3.67
2833 3899 5.791480 GGTTTGTTAATGGTGATTTCGTACG 59.209 40.000 9.53 9.53 0.00 3.67
2834 3900 5.533533 TTGTTAATGGTGATTTCGTACGG 57.466 39.130 16.52 0.00 0.00 4.02
2835 3901 3.933955 TGTTAATGGTGATTTCGTACGGG 59.066 43.478 16.52 0.00 0.00 5.28
2836 3902 2.773993 AATGGTGATTTCGTACGGGT 57.226 45.000 16.52 1.24 0.00 5.28
2837 3903 2.773993 ATGGTGATTTCGTACGGGTT 57.226 45.000 16.52 0.00 0.00 4.11
2838 3904 2.547299 TGGTGATTTCGTACGGGTTT 57.453 45.000 16.52 0.00 0.00 3.27
2839 3905 2.144730 TGGTGATTTCGTACGGGTTTG 58.855 47.619 16.52 0.00 0.00 2.93
2840 3906 2.145536 GGTGATTTCGTACGGGTTTGT 58.854 47.619 16.52 0.00 0.00 2.83
2841 3907 2.549329 GGTGATTTCGTACGGGTTTGTT 59.451 45.455 16.52 0.00 0.00 2.83
2842 3908 3.003585 GGTGATTTCGTACGGGTTTGTTT 59.996 43.478 16.52 0.00 0.00 2.83
2843 3909 4.213674 GTGATTTCGTACGGGTTTGTTTC 58.786 43.478 16.52 2.71 0.00 2.78
2844 3910 4.024641 GTGATTTCGTACGGGTTTGTTTCT 60.025 41.667 16.52 0.00 0.00 2.52
2855 3921 4.497507 CGGGTTTGTTTCTTCCACTCTTTC 60.498 45.833 0.00 0.00 0.00 2.62
2914 3987 4.272504 TGAAGCCGTAAACTGAAGAAACTG 59.727 41.667 0.00 0.00 0.00 3.16
2915 3988 2.548480 AGCCGTAAACTGAAGAAACTGC 59.452 45.455 0.00 0.00 0.00 4.40
2942 4020 1.613255 GGCCAAGCTTTGCTACCTACA 60.613 52.381 20.64 0.00 38.25 2.74
2943 4021 1.740025 GCCAAGCTTTGCTACCTACAG 59.260 52.381 14.95 0.00 38.25 2.74
2944 4022 2.615493 GCCAAGCTTTGCTACCTACAGA 60.615 50.000 14.95 0.00 38.25 3.41
2945 4023 3.878778 CCAAGCTTTGCTACCTACAGAT 58.121 45.455 0.00 0.00 38.25 2.90
2953 4039 7.995488 AGCTTTGCTACCTACAGATTAATCATT 59.005 33.333 17.56 6.19 36.99 2.57
2967 4053 9.146984 CAGATTAATCATTTGCTGTCAACAAAT 57.853 29.630 17.56 8.14 46.05 2.32
2980 4066 7.487829 TGCTGTCAACAAATTCTAGTTTTCAAC 59.512 33.333 0.00 0.00 0.00 3.18
2981 4067 7.702348 GCTGTCAACAAATTCTAGTTTTCAACT 59.298 33.333 0.00 0.00 45.40 3.16
2982 4068 8.909708 TGTCAACAAATTCTAGTTTTCAACTG 57.090 30.769 0.00 0.00 42.84 3.16
2983 4069 8.519526 TGTCAACAAATTCTAGTTTTCAACTGT 58.480 29.630 0.00 0.00 42.84 3.55
2984 4070 9.997482 GTCAACAAATTCTAGTTTTCAACTGTA 57.003 29.630 0.00 0.00 42.84 2.74
3027 4113 9.354673 TCTATCTATTTTCTTTTTGCCCTATGG 57.645 33.333 0.00 0.00 0.00 2.74
3028 4114 9.354673 CTATCTATTTTCTTTTTGCCCTATGGA 57.645 33.333 0.00 0.00 0.00 3.41
3029 4115 8.788238 ATCTATTTTCTTTTTGCCCTATGGAT 57.212 30.769 0.00 0.00 0.00 3.41
3030 4116 8.608185 TCTATTTTCTTTTTGCCCTATGGATT 57.392 30.769 0.00 0.00 0.00 3.01
3031 4117 9.707957 TCTATTTTCTTTTTGCCCTATGGATTA 57.292 29.630 0.00 0.00 0.00 1.75
3032 4118 9.750125 CTATTTTCTTTTTGCCCTATGGATTAC 57.250 33.333 0.00 0.00 0.00 1.89
3033 4119 6.538945 TTTCTTTTTGCCCTATGGATTACC 57.461 37.500 0.00 0.00 0.00 2.85
3044 4130 2.917713 TGGATTACCATGCCAACCTT 57.082 45.000 0.00 0.00 41.77 3.50
3045 4131 2.455557 TGGATTACCATGCCAACCTTG 58.544 47.619 0.00 0.00 41.77 3.61
3046 4132 2.225242 TGGATTACCATGCCAACCTTGT 60.225 45.455 0.00 0.00 41.77 3.16
3047 4133 2.166254 GGATTACCATGCCAACCTTGTG 59.834 50.000 0.00 0.00 35.97 3.33
3048 4134 2.373335 TTACCATGCCAACCTTGTGT 57.627 45.000 0.00 0.00 0.00 3.72
3049 4135 1.904287 TACCATGCCAACCTTGTGTC 58.096 50.000 0.00 0.00 0.00 3.67
3050 4136 0.185901 ACCATGCCAACCTTGTGTCT 59.814 50.000 0.00 0.00 0.00 3.41
3051 4137 1.423541 ACCATGCCAACCTTGTGTCTA 59.576 47.619 0.00 0.00 0.00 2.59
3052 4138 2.086869 CCATGCCAACCTTGTGTCTAG 58.913 52.381 0.00 0.00 0.00 2.43
3053 4139 2.290260 CCATGCCAACCTTGTGTCTAGA 60.290 50.000 0.00 0.00 0.00 2.43
3054 4140 2.543777 TGCCAACCTTGTGTCTAGAC 57.456 50.000 16.32 16.32 0.00 2.59
3055 4141 2.047061 TGCCAACCTTGTGTCTAGACT 58.953 47.619 23.01 0.00 0.00 3.24
3056 4142 2.438021 TGCCAACCTTGTGTCTAGACTT 59.562 45.455 23.01 5.75 0.00 3.01
3057 4143 3.118038 TGCCAACCTTGTGTCTAGACTTT 60.118 43.478 23.01 4.86 0.00 2.66
3058 4144 3.883489 GCCAACCTTGTGTCTAGACTTTT 59.117 43.478 23.01 5.19 0.00 2.27
3059 4145 4.261197 GCCAACCTTGTGTCTAGACTTTTG 60.261 45.833 23.01 14.93 0.00 2.44
3060 4146 4.261197 CCAACCTTGTGTCTAGACTTTTGC 60.261 45.833 23.01 9.12 0.00 3.68
3061 4147 4.423625 ACCTTGTGTCTAGACTTTTGCT 57.576 40.909 23.01 0.17 0.00 3.91
3062 4148 4.781934 ACCTTGTGTCTAGACTTTTGCTT 58.218 39.130 23.01 0.56 0.00 3.91
3063 4149 5.193679 ACCTTGTGTCTAGACTTTTGCTTT 58.806 37.500 23.01 0.00 0.00 3.51
3064 4150 5.297029 ACCTTGTGTCTAGACTTTTGCTTTC 59.703 40.000 23.01 4.23 0.00 2.62
3065 4151 5.296780 CCTTGTGTCTAGACTTTTGCTTTCA 59.703 40.000 23.01 6.38 0.00 2.69
3066 4152 6.183360 CCTTGTGTCTAGACTTTTGCTTTCAA 60.183 38.462 23.01 12.15 0.00 2.69
3067 4153 6.751514 TGTGTCTAGACTTTTGCTTTCAAA 57.248 33.333 23.01 0.00 40.17 2.69
3068 4154 6.551736 TGTGTCTAGACTTTTGCTTTCAAAC 58.448 36.000 23.01 8.95 41.48 2.93
3069 4155 6.374333 TGTGTCTAGACTTTTGCTTTCAAACT 59.626 34.615 23.01 0.00 41.48 2.66
3070 4156 7.094377 TGTGTCTAGACTTTTGCTTTCAAACTT 60.094 33.333 23.01 0.00 41.48 2.66
3071 4157 7.755373 GTGTCTAGACTTTTGCTTTCAAACTTT 59.245 33.333 23.01 0.00 41.48 2.66
3072 4158 8.952278 TGTCTAGACTTTTGCTTTCAAACTTTA 58.048 29.630 23.01 0.00 41.48 1.85
3073 4159 9.783256 GTCTAGACTTTTGCTTTCAAACTTTAA 57.217 29.630 15.91 0.00 41.48 1.52
3074 4160 9.783256 TCTAGACTTTTGCTTTCAAACTTTAAC 57.217 29.630 0.00 0.00 41.48 2.01
3075 4161 9.788960 CTAGACTTTTGCTTTCAAACTTTAACT 57.211 29.630 0.00 0.00 41.48 2.24
3076 4162 8.466086 AGACTTTTGCTTTCAAACTTTAACTG 57.534 30.769 0.00 0.00 41.48 3.16
3077 4163 8.303876 AGACTTTTGCTTTCAAACTTTAACTGA 58.696 29.630 0.00 0.00 41.48 3.41
3078 4164 9.087424 GACTTTTGCTTTCAAACTTTAACTGAT 57.913 29.630 0.00 0.00 41.48 2.90
3079 4165 8.872845 ACTTTTGCTTTCAAACTTTAACTGATG 58.127 29.630 0.00 0.00 41.48 3.07
3080 4166 7.769272 TTTGCTTTCAAACTTTAACTGATGG 57.231 32.000 0.00 0.00 37.28 3.51
3081 4167 6.707440 TGCTTTCAAACTTTAACTGATGGA 57.293 33.333 0.00 0.00 0.00 3.41
3082 4168 6.738114 TGCTTTCAAACTTTAACTGATGGAG 58.262 36.000 0.00 0.00 0.00 3.86
3083 4169 5.631096 GCTTTCAAACTTTAACTGATGGAGC 59.369 40.000 0.00 0.00 0.00 4.70
3084 4170 6.707440 TTTCAAACTTTAACTGATGGAGCA 57.293 33.333 0.00 0.00 0.00 4.26
3085 4171 6.707440 TTCAAACTTTAACTGATGGAGCAA 57.293 33.333 0.00 0.00 0.00 3.91
3086 4172 6.899393 TCAAACTTTAACTGATGGAGCAAT 57.101 33.333 0.00 0.00 0.00 3.56
3087 4173 7.994425 TCAAACTTTAACTGATGGAGCAATA 57.006 32.000 0.00 0.00 0.00 1.90
3088 4174 8.579850 TCAAACTTTAACTGATGGAGCAATAT 57.420 30.769 0.00 0.00 0.00 1.28
3089 4175 9.023962 TCAAACTTTAACTGATGGAGCAATATT 57.976 29.630 0.00 0.00 0.00 1.28
3090 4176 9.294030 CAAACTTTAACTGATGGAGCAATATTC 57.706 33.333 0.00 0.00 0.00 1.75
3091 4177 8.814038 AACTTTAACTGATGGAGCAATATTCT 57.186 30.769 0.00 0.00 0.00 2.40
3092 4178 9.905713 AACTTTAACTGATGGAGCAATATTCTA 57.094 29.630 0.00 0.00 0.00 2.10
3093 4179 9.905713 ACTTTAACTGATGGAGCAATATTCTAA 57.094 29.630 0.00 0.00 0.00 2.10
3139 4225 9.148104 ACGTAGTGAGAATAATTACTTCCAAAC 57.852 33.333 0.00 0.00 42.51 2.93
3140 4226 8.601476 CGTAGTGAGAATAATTACTTCCAAACC 58.399 37.037 0.00 0.00 0.00 3.27
3141 4227 7.611213 AGTGAGAATAATTACTTCCAAACCG 57.389 36.000 0.00 0.00 0.00 4.44
3142 4228 7.391620 AGTGAGAATAATTACTTCCAAACCGA 58.608 34.615 0.00 0.00 0.00 4.69
3143 4229 8.047310 AGTGAGAATAATTACTTCCAAACCGAT 58.953 33.333 0.00 0.00 0.00 4.18
3144 4230 8.674607 GTGAGAATAATTACTTCCAAACCGATT 58.325 33.333 0.00 0.00 0.00 3.34
3145 4231 9.238368 TGAGAATAATTACTTCCAAACCGATTT 57.762 29.630 0.00 0.00 0.00 2.17
3148 4234 9.849166 GAATAATTACTTCCAAACCGATTTTCA 57.151 29.630 0.00 0.00 0.00 2.69
3151 4237 8.757164 AATTACTTCCAAACCGATTTTCAATC 57.243 30.769 0.00 0.00 0.00 2.67
3152 4238 5.134202 ACTTCCAAACCGATTTTCAATCC 57.866 39.130 0.00 0.00 0.00 3.01
3153 4239 4.021456 ACTTCCAAACCGATTTTCAATCCC 60.021 41.667 0.00 0.00 0.00 3.85
3154 4240 3.773560 TCCAAACCGATTTTCAATCCCT 58.226 40.909 0.00 0.00 0.00 4.20
3155 4241 4.156477 TCCAAACCGATTTTCAATCCCTT 58.844 39.130 0.00 0.00 0.00 3.95
3156 4242 4.591072 TCCAAACCGATTTTCAATCCCTTT 59.409 37.500 0.00 0.00 0.00 3.11
3157 4243 5.775701 TCCAAACCGATTTTCAATCCCTTTA 59.224 36.000 0.00 0.00 0.00 1.85
3158 4244 6.267928 TCCAAACCGATTTTCAATCCCTTTAA 59.732 34.615 0.00 0.00 0.00 1.52
3159 4245 6.931840 CCAAACCGATTTTCAATCCCTTTAAA 59.068 34.615 0.00 0.00 0.00 1.52
3160 4246 7.117667 CCAAACCGATTTTCAATCCCTTTAAAG 59.882 37.037 8.32 8.32 0.00 1.85
3161 4247 7.533289 AACCGATTTTCAATCCCTTTAAAGA 57.467 32.000 16.98 0.00 0.00 2.52
3162 4248 7.158099 ACCGATTTTCAATCCCTTTAAAGAG 57.842 36.000 16.98 3.26 0.00 2.85
3163 4249 6.719829 ACCGATTTTCAATCCCTTTAAAGAGT 59.280 34.615 16.98 0.00 0.00 3.24
3164 4250 7.886446 ACCGATTTTCAATCCCTTTAAAGAGTA 59.114 33.333 16.98 1.96 0.00 2.59
3165 4251 8.736244 CCGATTTTCAATCCCTTTAAAGAGTAA 58.264 33.333 16.98 0.00 0.00 2.24
3171 4257 8.788325 TCAATCCCTTTAAAGAGTAAAGTAGC 57.212 34.615 16.98 0.00 33.83 3.58
3172 4258 8.603304 TCAATCCCTTTAAAGAGTAAAGTAGCT 58.397 33.333 16.98 0.00 33.83 3.32
3173 4259 9.886132 CAATCCCTTTAAAGAGTAAAGTAGCTA 57.114 33.333 16.98 0.00 33.83 3.32
3201 4287 8.861033 AAAAACTACAATTCGGTTAAGGTTTC 57.139 30.769 0.00 0.00 0.00 2.78
3202 4288 6.564709 AACTACAATTCGGTTAAGGTTTCC 57.435 37.500 0.00 0.00 0.00 3.13
3203 4289 5.623169 ACTACAATTCGGTTAAGGTTTCCA 58.377 37.500 0.00 0.00 0.00 3.53
3204 4290 4.841443 ACAATTCGGTTAAGGTTTCCAC 57.159 40.909 0.00 0.00 0.00 4.02
3205 4291 4.208746 ACAATTCGGTTAAGGTTTCCACA 58.791 39.130 0.00 0.00 0.00 4.17
3206 4292 4.645588 ACAATTCGGTTAAGGTTTCCACAA 59.354 37.500 0.00 0.00 0.00 3.33
3207 4293 5.127356 ACAATTCGGTTAAGGTTTCCACAAA 59.873 36.000 0.00 0.00 0.00 2.83
3208 4294 6.183360 ACAATTCGGTTAAGGTTTCCACAAAT 60.183 34.615 0.00 0.00 0.00 2.32
3209 4295 5.441709 TTCGGTTAAGGTTTCCACAAATC 57.558 39.130 0.00 0.00 0.00 2.17
3210 4296 4.462133 TCGGTTAAGGTTTCCACAAATCA 58.538 39.130 0.00 0.00 0.00 2.57
3211 4297 4.276431 TCGGTTAAGGTTTCCACAAATCAC 59.724 41.667 0.00 0.00 0.00 3.06
3212 4298 4.277423 CGGTTAAGGTTTCCACAAATCACT 59.723 41.667 0.00 0.00 0.00 3.41
3213 4299 5.528870 GGTTAAGGTTTCCACAAATCACTG 58.471 41.667 0.00 0.00 0.00 3.66
3214 4300 3.733443 AAGGTTTCCACAAATCACTGC 57.267 42.857 0.00 0.00 0.00 4.40
3215 4301 2.949447 AGGTTTCCACAAATCACTGCT 58.051 42.857 0.00 0.00 0.00 4.24
3216 4302 3.299503 AGGTTTCCACAAATCACTGCTT 58.700 40.909 0.00 0.00 0.00 3.91
3217 4303 3.319122 AGGTTTCCACAAATCACTGCTTC 59.681 43.478 0.00 0.00 0.00 3.86
3218 4304 3.068024 GGTTTCCACAAATCACTGCTTCA 59.932 43.478 0.00 0.00 0.00 3.02
3219 4305 4.441356 GGTTTCCACAAATCACTGCTTCAA 60.441 41.667 0.00 0.00 0.00 2.69
3220 4306 4.998671 TTCCACAAATCACTGCTTCAAA 57.001 36.364 0.00 0.00 0.00 2.69
3221 4307 4.998671 TCCACAAATCACTGCTTCAAAA 57.001 36.364 0.00 0.00 0.00 2.44
3222 4308 5.336150 TCCACAAATCACTGCTTCAAAAA 57.664 34.783 0.00 0.00 0.00 1.94
3240 4326 1.486439 AAAAATTTCGTGCACCAGCG 58.514 45.000 12.15 0.00 46.23 5.18
3241 4327 0.318614 AAAATTTCGTGCACCAGCGG 60.319 50.000 12.15 0.00 46.23 5.52
3242 4328 2.141122 AAATTTCGTGCACCAGCGGG 62.141 55.000 12.15 0.00 46.23 6.13
3243 4329 3.545124 ATTTCGTGCACCAGCGGGA 62.545 57.895 10.86 0.00 46.23 5.14
3244 4330 4.680237 TTCGTGCACCAGCGGGAG 62.680 66.667 10.86 2.03 46.23 4.30
3256 4342 2.357517 CGGGAGCTGAGCAACGTT 60.358 61.111 7.39 0.00 0.00 3.99
3257 4343 1.080093 CGGGAGCTGAGCAACGTTA 60.080 57.895 7.39 0.00 0.00 3.18
3258 4344 0.460284 CGGGAGCTGAGCAACGTTAT 60.460 55.000 7.39 0.00 0.00 1.89
3259 4345 1.009829 GGGAGCTGAGCAACGTTATG 58.990 55.000 7.39 0.00 0.00 1.90
3260 4346 1.676014 GGGAGCTGAGCAACGTTATGT 60.676 52.381 7.39 0.00 0.00 2.29
3261 4347 2.076863 GGAGCTGAGCAACGTTATGTT 58.923 47.619 7.39 0.00 43.09 2.71
3274 4360 6.648725 AACGTTATGTTGACTCTGAATAGC 57.351 37.500 0.00 0.00 40.00 2.97
3275 4361 5.720202 ACGTTATGTTGACTCTGAATAGCA 58.280 37.500 0.00 0.00 0.00 3.49
3276 4362 6.163476 ACGTTATGTTGACTCTGAATAGCAA 58.837 36.000 0.00 0.00 0.00 3.91
3277 4363 6.649141 ACGTTATGTTGACTCTGAATAGCAAA 59.351 34.615 0.00 0.00 0.00 3.68
3278 4364 7.334421 ACGTTATGTTGACTCTGAATAGCAAAT 59.666 33.333 0.00 0.00 0.00 2.32
3279 4365 8.817100 CGTTATGTTGACTCTGAATAGCAAATA 58.183 33.333 0.00 0.00 0.00 1.40
3282 4368 7.558161 TGTTGACTCTGAATAGCAAATATGG 57.442 36.000 0.00 0.00 0.00 2.74
3283 4369 6.543465 TGTTGACTCTGAATAGCAAATATGGG 59.457 38.462 0.00 0.00 0.00 4.00
3284 4370 6.499106 TGACTCTGAATAGCAAATATGGGA 57.501 37.500 0.00 0.00 0.00 4.37
3285 4371 7.083062 TGACTCTGAATAGCAAATATGGGAT 57.917 36.000 0.00 0.00 0.00 3.85
3286 4372 6.938596 TGACTCTGAATAGCAAATATGGGATG 59.061 38.462 0.00 0.00 0.00 3.51
3287 4373 5.709164 ACTCTGAATAGCAAATATGGGATGC 59.291 40.000 0.00 0.00 40.34 3.91
3288 4374 5.633117 TCTGAATAGCAAATATGGGATGCA 58.367 37.500 0.00 0.00 42.45 3.96
3289 4375 6.250711 TCTGAATAGCAAATATGGGATGCAT 58.749 36.000 0.00 0.00 42.45 3.96
3290 4376 7.404481 TCTGAATAGCAAATATGGGATGCATA 58.596 34.615 0.00 0.00 42.45 3.14
3291 4377 7.889600 TCTGAATAGCAAATATGGGATGCATAA 59.110 33.333 0.00 0.00 42.45 1.90
3292 4378 8.419922 TGAATAGCAAATATGGGATGCATAAA 57.580 30.769 0.00 0.00 42.45 1.40
3293 4379 9.038072 TGAATAGCAAATATGGGATGCATAAAT 57.962 29.630 0.00 0.00 42.45 1.40
3294 4380 9.880157 GAATAGCAAATATGGGATGCATAAATT 57.120 29.630 0.00 0.00 42.45 1.82
3298 4384 9.661563 AGCAAATATGGGATGCATAAATTAATG 57.338 29.630 0.00 0.00 42.45 1.90
3299 4385 8.885722 GCAAATATGGGATGCATAAATTAATGG 58.114 33.333 0.00 0.00 39.81 3.16
3302 4388 9.772605 AATATGGGATGCATAAATTAATGGAGA 57.227 29.630 0.00 0.00 30.21 3.71
3303 4389 9.947189 ATATGGGATGCATAAATTAATGGAGAT 57.053 29.630 0.00 0.00 30.21 2.75
3304 4390 8.674925 ATGGGATGCATAAATTAATGGAGATT 57.325 30.769 0.00 0.00 30.21 2.40
3305 4391 7.898918 TGGGATGCATAAATTAATGGAGATTG 58.101 34.615 0.00 0.00 30.21 2.67
3306 4392 6.815142 GGGATGCATAAATTAATGGAGATTGC 59.185 38.462 0.00 0.00 30.21 3.56
3307 4393 7.380536 GGATGCATAAATTAATGGAGATTGCA 58.619 34.615 0.00 9.63 30.21 4.08
3308 4394 7.874016 GGATGCATAAATTAATGGAGATTGCAA 59.126 33.333 0.00 0.00 30.21 4.08
3309 4395 9.263538 GATGCATAAATTAATGGAGATTGCAAA 57.736 29.630 1.71 0.00 30.21 3.68
3310 4396 9.787435 ATGCATAAATTAATGGAGATTGCAAAT 57.213 25.926 1.71 0.00 30.21 2.32
3311 4397 9.047371 TGCATAAATTAATGGAGATTGCAAATG 57.953 29.630 1.71 0.00 0.00 2.32
3312 4398 9.048446 GCATAAATTAATGGAGATTGCAAATGT 57.952 29.630 1.71 0.00 0.00 2.71
3319 4405 7.886629 AATGGAGATTGCAAATGTACATACT 57.113 32.000 9.21 0.00 0.00 2.12
3320 4406 8.978874 AATGGAGATTGCAAATGTACATACTA 57.021 30.769 9.21 0.00 0.00 1.82
3321 4407 8.978874 ATGGAGATTGCAAATGTACATACTAA 57.021 30.769 9.21 3.27 0.00 2.24
3322 4408 8.800370 TGGAGATTGCAAATGTACATACTAAA 57.200 30.769 9.21 2.82 0.00 1.85
3323 4409 8.673711 TGGAGATTGCAAATGTACATACTAAAC 58.326 33.333 9.21 2.19 0.00 2.01
3324 4410 8.673711 GGAGATTGCAAATGTACATACTAAACA 58.326 33.333 9.21 0.00 0.00 2.83
3326 4412 9.840427 AGATTGCAAATGTACATACTAAACAAC 57.160 29.630 9.21 4.42 0.00 3.32
3327 4413 9.840427 GATTGCAAATGTACATACTAAACAACT 57.160 29.630 9.21 0.50 0.00 3.16
3328 4414 9.840427 ATTGCAAATGTACATACTAAACAACTC 57.160 29.630 9.21 0.00 0.00 3.01
3329 4415 8.615878 TGCAAATGTACATACTAAACAACTCT 57.384 30.769 9.21 0.00 0.00 3.24
3330 4416 8.717821 TGCAAATGTACATACTAAACAACTCTC 58.282 33.333 9.21 0.00 0.00 3.20
3331 4417 8.936864 GCAAATGTACATACTAAACAACTCTCT 58.063 33.333 9.21 0.00 0.00 3.10
3335 4421 9.640963 ATGTACATACTAAACAACTCTCTTCAC 57.359 33.333 6.56 0.00 0.00 3.18
3336 4422 8.857098 TGTACATACTAAACAACTCTCTTCACT 58.143 33.333 0.00 0.00 0.00 3.41
3337 4423 9.694137 GTACATACTAAACAACTCTCTTCACTT 57.306 33.333 0.00 0.00 0.00 3.16
3338 4424 8.594881 ACATACTAAACAACTCTCTTCACTTG 57.405 34.615 0.00 0.00 0.00 3.16
3339 4425 8.204836 ACATACTAAACAACTCTCTTCACTTGT 58.795 33.333 0.00 0.00 0.00 3.16
3340 4426 9.692749 CATACTAAACAACTCTCTTCACTTGTA 57.307 33.333 0.00 0.00 0.00 2.41
3341 4427 9.694137 ATACTAAACAACTCTCTTCACTTGTAC 57.306 33.333 0.00 0.00 0.00 2.90
3342 4428 7.783042 ACTAAACAACTCTCTTCACTTGTACT 58.217 34.615 0.00 0.00 0.00 2.73
3343 4429 7.921745 ACTAAACAACTCTCTTCACTTGTACTC 59.078 37.037 0.00 0.00 0.00 2.59
3344 4430 5.203060 ACAACTCTCTTCACTTGTACTCC 57.797 43.478 0.00 0.00 0.00 3.85
3345 4431 4.039366 ACAACTCTCTTCACTTGTACTCCC 59.961 45.833 0.00 0.00 0.00 4.30
3346 4432 4.120946 ACTCTCTTCACTTGTACTCCCT 57.879 45.455 0.00 0.00 0.00 4.20
3347 4433 4.083565 ACTCTCTTCACTTGTACTCCCTC 58.916 47.826 0.00 0.00 0.00 4.30
3348 4434 3.432378 TCTCTTCACTTGTACTCCCTCC 58.568 50.000 0.00 0.00 0.00 4.30
3349 4435 3.165875 CTCTTCACTTGTACTCCCTCCA 58.834 50.000 0.00 0.00 0.00 3.86
3350 4436 3.772025 CTCTTCACTTGTACTCCCTCCAT 59.228 47.826 0.00 0.00 0.00 3.41
3351 4437 4.168101 TCTTCACTTGTACTCCCTCCATT 58.832 43.478 0.00 0.00 0.00 3.16
3352 4438 4.223032 TCTTCACTTGTACTCCCTCCATTC 59.777 45.833 0.00 0.00 0.00 2.67
3353 4439 2.838202 TCACTTGTACTCCCTCCATTCC 59.162 50.000 0.00 0.00 0.00 3.01
3354 4440 2.571653 CACTTGTACTCCCTCCATTCCA 59.428 50.000 0.00 0.00 0.00 3.53
3355 4441 3.200825 CACTTGTACTCCCTCCATTCCAT 59.799 47.826 0.00 0.00 0.00 3.41
3356 4442 4.408921 CACTTGTACTCCCTCCATTCCATA 59.591 45.833 0.00 0.00 0.00 2.74
3357 4443 5.036916 ACTTGTACTCCCTCCATTCCATAA 58.963 41.667 0.00 0.00 0.00 1.90
3358 4444 5.672194 ACTTGTACTCCCTCCATTCCATAAT 59.328 40.000 0.00 0.00 0.00 1.28
3369 4455 4.411869 TCCATTCCATAATAGCACACCTGA 59.588 41.667 0.00 0.00 0.00 3.86
3370 4456 4.516698 CCATTCCATAATAGCACACCTGAC 59.483 45.833 0.00 0.00 0.00 3.51
3402 4488 3.906998 TGTGATGGTTTGGTATTTTGCG 58.093 40.909 0.00 0.00 0.00 4.85
3412 4498 2.873472 TGGTATTTTGCGTGACGAACTT 59.127 40.909 10.10 0.00 0.00 2.66
3413 4499 4.056740 TGGTATTTTGCGTGACGAACTTA 58.943 39.130 10.10 0.00 0.00 2.24
3423 4509 4.612259 GCGTGACGAACTTACTAGAGTCAA 60.612 45.833 10.10 0.00 36.47 3.18
3434 4520 7.904094 ACTTACTAGAGTCAACGAATACTACG 58.096 38.462 0.00 0.00 0.00 3.51
3444 4530 5.570206 TCAACGAATACTACGAATGTGTGAC 59.430 40.000 0.00 0.00 34.70 3.67
3445 4531 5.050644 ACGAATACTACGAATGTGTGACA 57.949 39.130 0.00 0.00 34.70 3.58
3450 4536 7.201401 CGAATACTACGAATGTGTGACAATCAA 60.201 37.037 0.00 0.00 27.46 2.57
3452 4538 6.801539 ACTACGAATGTGTGACAATCAATT 57.198 33.333 0.00 0.00 27.46 2.32
3453 4539 7.899178 ACTACGAATGTGTGACAATCAATTA 57.101 32.000 0.00 0.00 27.46 1.40
3483 4569 2.309162 TGTAGAGTCTAGCAGTGGGACT 59.691 50.000 0.00 0.00 42.15 3.85
3485 4571 0.736053 GAGTCTAGCAGTGGGACTCG 59.264 60.000 6.58 0.00 43.84 4.18
3554 4640 4.740822 GCAGTGGGACCCGCCAAT 62.741 66.667 20.91 0.00 38.95 3.16
3555 4641 2.035626 CAGTGGGACCCGCCAATT 59.964 61.111 20.91 0.00 38.95 2.32
3727 4815 7.778185 AATATAAATAGGTAGTGGCTCGACT 57.222 36.000 0.10 0.00 0.00 4.18
3733 4821 3.922910 AGGTAGTGGCTCGACTAAAAAC 58.077 45.455 0.10 0.00 30.16 2.43
3816 4905 2.545742 GCTGAAAACTTCAATTGGGCGT 60.546 45.455 5.42 0.00 39.58 5.68
3829 4919 0.459585 TGGGCGTTCGTGAGCTAATC 60.460 55.000 0.00 0.00 0.00 1.75
3832 4922 1.324736 GGCGTTCGTGAGCTAATCTTG 59.675 52.381 0.00 0.00 0.00 3.02
3836 4926 4.629065 CGTTCGTGAGCTAATCTTGTTTC 58.371 43.478 0.00 0.00 0.00 2.78
3838 4929 2.666508 TCGTGAGCTAATCTTGTTTCGC 59.333 45.455 0.00 0.00 0.00 4.70
3851 4942 7.672983 ATCTTGTTTCGCTCTATCTCAAAAA 57.327 32.000 0.00 0.00 0.00 1.94
3862 4953 9.956720 CGCTCTATCTCAAAAATTAAAATGGAT 57.043 29.630 0.00 0.00 0.00 3.41
3879 4970 5.667539 ATGGATAATAGGAGTGTCGATGG 57.332 43.478 0.00 0.00 0.00 3.51
3880 4971 3.832490 TGGATAATAGGAGTGTCGATGGG 59.168 47.826 0.00 0.00 0.00 4.00
3881 4972 4.087182 GGATAATAGGAGTGTCGATGGGA 58.913 47.826 0.00 0.00 0.00 4.37
3882 4973 4.527038 GGATAATAGGAGTGTCGATGGGAA 59.473 45.833 0.00 0.00 0.00 3.97
3890 4981 4.120589 GAGTGTCGATGGGAAATCTTACC 58.879 47.826 0.00 0.00 0.00 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.082625 TCCTGCACTTTCAACTAATGCATG 60.083 41.667 0.00 0.00 44.73 4.06
1 2 4.081406 TCCTGCACTTTCAACTAATGCAT 58.919 39.130 0.00 0.00 44.73 3.96
2 3 3.485394 TCCTGCACTTTCAACTAATGCA 58.515 40.909 0.00 0.00 43.70 3.96
3 4 4.156556 TGATCCTGCACTTTCAACTAATGC 59.843 41.667 0.00 0.00 36.81 3.56
4 5 5.885230 TGATCCTGCACTTTCAACTAATG 57.115 39.130 0.00 0.00 0.00 1.90
5 6 5.948162 ACATGATCCTGCACTTTCAACTAAT 59.052 36.000 0.00 0.00 0.00 1.73
6 7 5.181811 CACATGATCCTGCACTTTCAACTAA 59.818 40.000 0.00 0.00 0.00 2.24
7 8 4.696877 CACATGATCCTGCACTTTCAACTA 59.303 41.667 0.00 0.00 0.00 2.24
8 9 3.504906 CACATGATCCTGCACTTTCAACT 59.495 43.478 0.00 0.00 0.00 3.16
9 10 3.829948 CACATGATCCTGCACTTTCAAC 58.170 45.455 0.00 0.00 0.00 3.18
10 11 2.229543 GCACATGATCCTGCACTTTCAA 59.770 45.455 0.00 0.00 33.31 2.69
11 12 1.814394 GCACATGATCCTGCACTTTCA 59.186 47.619 0.00 0.00 33.31 2.69
12 13 1.814394 TGCACATGATCCTGCACTTTC 59.186 47.619 0.00 0.00 38.49 2.62
13 14 1.913778 TGCACATGATCCTGCACTTT 58.086 45.000 0.00 0.00 38.49 2.66
14 15 2.139323 ATGCACATGATCCTGCACTT 57.861 45.000 10.54 0.00 45.91 3.16
15 16 2.172082 ACTATGCACATGATCCTGCACT 59.828 45.455 10.54 4.23 45.91 4.40
16 17 2.569059 ACTATGCACATGATCCTGCAC 58.431 47.619 10.54 0.00 45.91 4.57
18 19 3.208594 TCAACTATGCACATGATCCTGC 58.791 45.455 0.00 0.00 0.00 4.85
19 20 5.124297 TGTTTCAACTATGCACATGATCCTG 59.876 40.000 0.00 0.00 0.00 3.86
20 21 5.124457 GTGTTTCAACTATGCACATGATCCT 59.876 40.000 0.00 0.00 0.00 3.24
21 22 5.106197 TGTGTTTCAACTATGCACATGATCC 60.106 40.000 0.00 0.00 35.48 3.36
22 23 5.796935 GTGTGTTTCAACTATGCACATGATC 59.203 40.000 0.00 0.00 41.26 2.92
23 24 5.241285 TGTGTGTTTCAACTATGCACATGAT 59.759 36.000 0.00 0.00 41.26 2.45
24 25 4.578105 TGTGTGTTTCAACTATGCACATGA 59.422 37.500 0.00 0.00 41.26 3.07
25 26 4.857799 TGTGTGTTTCAACTATGCACATG 58.142 39.130 0.00 0.00 41.26 3.21
26 27 5.512753 TTGTGTGTTTCAACTATGCACAT 57.487 34.783 0.00 0.00 41.26 3.21
27 28 4.972514 TTGTGTGTTTCAACTATGCACA 57.027 36.364 0.00 0.00 37.68 4.57
28 29 6.639671 TTTTTGTGTGTTTCAACTATGCAC 57.360 33.333 0.00 0.00 0.00 4.57
48 49 3.073946 TGGACGGAAGGGAGAAGATTTTT 59.926 43.478 0.00 0.00 0.00 1.94
49 50 2.642807 TGGACGGAAGGGAGAAGATTTT 59.357 45.455 0.00 0.00 0.00 1.82
50 51 2.266279 TGGACGGAAGGGAGAAGATTT 58.734 47.619 0.00 0.00 0.00 2.17
51 52 1.952621 TGGACGGAAGGGAGAAGATT 58.047 50.000 0.00 0.00 0.00 2.40
52 53 1.765314 CATGGACGGAAGGGAGAAGAT 59.235 52.381 0.00 0.00 0.00 2.40
53 54 1.195115 CATGGACGGAAGGGAGAAGA 58.805 55.000 0.00 0.00 0.00 2.87
54 55 1.134670 GTCATGGACGGAAGGGAGAAG 60.135 57.143 0.00 0.00 0.00 2.85
55 56 0.902531 GTCATGGACGGAAGGGAGAA 59.097 55.000 0.00 0.00 0.00 2.87
56 57 0.041238 AGTCATGGACGGAAGGGAGA 59.959 55.000 0.00 0.00 37.67 3.71
57 58 0.905357 AAGTCATGGACGGAAGGGAG 59.095 55.000 0.00 0.00 37.67 4.30
58 59 0.902531 GAAGTCATGGACGGAAGGGA 59.097 55.000 0.00 0.00 37.67 4.20
59 60 0.905357 AGAAGTCATGGACGGAAGGG 59.095 55.000 0.00 0.00 37.67 3.95
60 61 2.622436 GAAGAAGTCATGGACGGAAGG 58.378 52.381 0.00 0.00 37.67 3.46
61 62 2.622436 GGAAGAAGTCATGGACGGAAG 58.378 52.381 0.00 0.00 37.67 3.46
62 63 1.067142 CGGAAGAAGTCATGGACGGAA 60.067 52.381 0.00 0.00 37.67 4.30
63 64 0.530744 CGGAAGAAGTCATGGACGGA 59.469 55.000 0.00 0.00 37.67 4.69
64 65 0.460284 CCGGAAGAAGTCATGGACGG 60.460 60.000 0.00 0.00 37.67 4.79
65 66 0.246635 ACCGGAAGAAGTCATGGACG 59.753 55.000 9.46 0.00 37.67 4.79
66 67 1.736032 CGACCGGAAGAAGTCATGGAC 60.736 57.143 9.46 0.00 33.08 4.02
67 68 0.530744 CGACCGGAAGAAGTCATGGA 59.469 55.000 9.46 0.00 33.08 3.41
68 69 0.460284 CCGACCGGAAGAAGTCATGG 60.460 60.000 9.46 0.00 37.50 3.66
69 70 0.246635 ACCGACCGGAAGAAGTCATG 59.753 55.000 16.07 0.00 38.96 3.07
70 71 0.246635 CACCGACCGGAAGAAGTCAT 59.753 55.000 16.07 0.00 38.96 3.06
71 72 1.663739 CACCGACCGGAAGAAGTCA 59.336 57.895 16.07 0.00 38.96 3.41
72 73 1.080025 CCACCGACCGGAAGAAGTC 60.080 63.158 16.07 0.00 38.96 3.01
73 74 1.532316 TCCACCGACCGGAAGAAGT 60.532 57.895 16.07 0.00 38.96 3.01
74 75 1.080025 GTCCACCGACCGGAAGAAG 60.080 63.158 16.07 0.00 38.96 2.85
75 76 1.189524 ATGTCCACCGACCGGAAGAA 61.190 55.000 16.07 3.48 38.32 2.52
76 77 1.601419 GATGTCCACCGACCGGAAGA 61.601 60.000 16.07 8.14 38.32 2.87
77 78 1.153628 GATGTCCACCGACCGGAAG 60.154 63.158 16.07 0.06 38.32 3.46
78 79 1.189524 AAGATGTCCACCGACCGGAA 61.190 55.000 16.07 0.00 38.32 4.30
79 80 1.601419 GAAGATGTCCACCGACCGGA 61.601 60.000 16.07 0.00 38.32 5.14
80 81 1.153628 GAAGATGTCCACCGACCGG 60.154 63.158 6.94 6.94 38.32 5.28
81 82 0.736325 GTGAAGATGTCCACCGACCG 60.736 60.000 0.00 0.00 38.32 4.79
82 83 0.320374 TGTGAAGATGTCCACCGACC 59.680 55.000 0.00 0.00 38.32 4.79
83 84 2.386661 ATGTGAAGATGTCCACCGAC 57.613 50.000 0.00 0.00 39.66 4.79
84 85 2.698803 CAATGTGAAGATGTCCACCGA 58.301 47.619 0.00 0.00 32.61 4.69
85 86 1.131126 GCAATGTGAAGATGTCCACCG 59.869 52.381 0.00 0.00 32.61 4.94
86 87 2.161855 TGCAATGTGAAGATGTCCACC 58.838 47.619 0.00 0.00 32.61 4.61
87 88 3.921119 TTGCAATGTGAAGATGTCCAC 57.079 42.857 0.00 0.00 0.00 4.02
88 89 3.635836 TGTTTGCAATGTGAAGATGTCCA 59.364 39.130 0.00 0.00 0.00 4.02
89 90 4.241590 TGTTTGCAATGTGAAGATGTCC 57.758 40.909 0.00 0.00 0.00 4.02
90 91 5.706916 AGATGTTTGCAATGTGAAGATGTC 58.293 37.500 0.00 0.00 0.00 3.06
91 92 5.336213 GGAGATGTTTGCAATGTGAAGATGT 60.336 40.000 0.00 0.00 0.00 3.06
92 93 5.100259 GGAGATGTTTGCAATGTGAAGATG 58.900 41.667 0.00 0.00 0.00 2.90
93 94 4.768448 TGGAGATGTTTGCAATGTGAAGAT 59.232 37.500 0.00 0.00 0.00 2.40
94 95 4.022935 GTGGAGATGTTTGCAATGTGAAGA 60.023 41.667 0.00 0.00 0.00 2.87
95 96 4.232221 GTGGAGATGTTTGCAATGTGAAG 58.768 43.478 0.00 0.00 0.00 3.02
96 97 3.635836 TGTGGAGATGTTTGCAATGTGAA 59.364 39.130 0.00 0.00 0.00 3.18
97 98 3.220940 TGTGGAGATGTTTGCAATGTGA 58.779 40.909 0.00 0.00 0.00 3.58
98 99 3.646611 TGTGGAGATGTTTGCAATGTG 57.353 42.857 0.00 0.00 0.00 3.21
99 100 3.384146 TGTTGTGGAGATGTTTGCAATGT 59.616 39.130 0.00 0.00 0.00 2.71
100 101 3.979948 TGTTGTGGAGATGTTTGCAATG 58.020 40.909 0.00 0.00 0.00 2.82
101 102 4.141981 TGTTGTTGTGGAGATGTTTGCAAT 60.142 37.500 0.00 0.00 0.00 3.56
102 103 3.194329 TGTTGTTGTGGAGATGTTTGCAA 59.806 39.130 0.00 0.00 0.00 4.08
103 104 2.757314 TGTTGTTGTGGAGATGTTTGCA 59.243 40.909 0.00 0.00 0.00 4.08
104 105 3.435105 TGTTGTTGTGGAGATGTTTGC 57.565 42.857 0.00 0.00 0.00 3.68
105 106 4.202141 ACCATGTTGTTGTGGAGATGTTTG 60.202 41.667 0.00 0.00 38.86 2.93
106 107 3.960102 ACCATGTTGTTGTGGAGATGTTT 59.040 39.130 0.00 0.00 38.86 2.83
107 108 3.318839 CACCATGTTGTTGTGGAGATGTT 59.681 43.478 0.00 0.00 38.86 2.71
108 109 2.886523 CACCATGTTGTTGTGGAGATGT 59.113 45.455 0.00 0.00 38.86 3.06
109 110 3.564235 CACCATGTTGTTGTGGAGATG 57.436 47.619 0.00 0.00 38.86 2.90
115 116 1.118838 AACCCCACCATGTTGTTGTG 58.881 50.000 0.00 0.00 0.00 3.33
116 117 1.118838 CAACCCCACCATGTTGTTGT 58.881 50.000 0.00 0.00 37.62 3.32
117 118 0.249826 GCAACCCCACCATGTTGTTG 60.250 55.000 0.00 0.00 42.91 3.33
118 119 1.406860 GGCAACCCCACCATGTTGTT 61.407 55.000 0.00 0.00 42.91 2.83
119 120 1.836604 GGCAACCCCACCATGTTGT 60.837 57.895 0.00 0.00 42.91 3.32
120 121 3.059099 GGCAACCCCACCATGTTG 58.941 61.111 0.00 0.00 43.62 3.33
132 133 0.250597 AGAACTTACCACCGGGCAAC 60.251 55.000 6.32 0.00 37.90 4.17
133 134 0.035739 GAGAACTTACCACCGGGCAA 59.964 55.000 6.32 0.00 37.90 4.52
134 135 1.122632 TGAGAACTTACCACCGGGCA 61.123 55.000 6.32 0.00 37.90 5.36
135 136 0.035739 TTGAGAACTTACCACCGGGC 59.964 55.000 6.32 0.00 37.90 6.13
136 137 2.554370 TTTGAGAACTTACCACCGGG 57.446 50.000 6.32 0.00 41.29 5.73
137 138 3.621715 GCTATTTGAGAACTTACCACCGG 59.378 47.826 0.00 0.00 0.00 5.28
138 139 3.621715 GGCTATTTGAGAACTTACCACCG 59.378 47.826 0.00 0.00 0.00 4.94
139 140 3.621715 CGGCTATTTGAGAACTTACCACC 59.378 47.826 0.00 0.00 0.00 4.61
140 141 3.063588 GCGGCTATTTGAGAACTTACCAC 59.936 47.826 0.00 0.00 0.00 4.16
141 142 3.055385 AGCGGCTATTTGAGAACTTACCA 60.055 43.478 0.00 0.00 0.00 3.25
142 143 3.532542 AGCGGCTATTTGAGAACTTACC 58.467 45.455 0.00 0.00 0.00 2.85
143 144 5.589192 TCTAGCGGCTATTTGAGAACTTAC 58.411 41.667 10.62 0.00 0.00 2.34
144 145 5.736492 GCTCTAGCGGCTATTTGAGAACTTA 60.736 44.000 21.98 0.00 0.00 2.24
145 146 4.688021 CTCTAGCGGCTATTTGAGAACTT 58.312 43.478 15.83 0.00 0.00 2.66
146 147 3.491792 GCTCTAGCGGCTATTTGAGAACT 60.492 47.826 21.98 0.00 0.00 3.01
147 148 2.797719 GCTCTAGCGGCTATTTGAGAAC 59.202 50.000 21.98 6.65 0.00 3.01
148 149 2.430694 TGCTCTAGCGGCTATTTGAGAA 59.569 45.455 21.98 13.06 45.83 2.87
149 150 2.031870 TGCTCTAGCGGCTATTTGAGA 58.968 47.619 21.98 12.44 45.83 3.27
150 151 2.131183 GTGCTCTAGCGGCTATTTGAG 58.869 52.381 10.62 14.13 45.83 3.02
151 152 1.202533 GGTGCTCTAGCGGCTATTTGA 60.203 52.381 10.62 3.80 45.83 2.69
152 153 1.221414 GGTGCTCTAGCGGCTATTTG 58.779 55.000 10.62 5.09 45.83 2.32
153 154 0.830648 TGGTGCTCTAGCGGCTATTT 59.169 50.000 10.62 0.00 45.83 1.40
154 155 0.830648 TTGGTGCTCTAGCGGCTATT 59.169 50.000 10.62 0.00 45.83 1.73
155 156 0.390860 CTTGGTGCTCTAGCGGCTAT 59.609 55.000 10.62 0.00 45.83 2.97
156 157 1.816537 CTTGGTGCTCTAGCGGCTA 59.183 57.895 9.71 9.71 45.83 3.93
157 158 2.581354 CTTGGTGCTCTAGCGGCT 59.419 61.111 7.98 7.98 45.83 5.52
158 159 3.198489 GCTTGGTGCTCTAGCGGC 61.198 66.667 0.00 0.00 45.83 6.53
159 160 2.103042 GTGCTTGGTGCTCTAGCGG 61.103 63.158 0.00 0.00 45.83 5.52
160 161 2.447887 CGTGCTTGGTGCTCTAGCG 61.448 63.158 0.00 0.00 45.83 4.26
161 162 1.079819 TCGTGCTTGGTGCTCTAGC 60.080 57.895 0.00 0.00 43.37 3.42
162 163 1.080995 GCTCGTGCTTGGTGCTCTAG 61.081 60.000 1.41 0.00 43.37 2.43
163 164 1.079819 GCTCGTGCTTGGTGCTCTA 60.080 57.895 1.41 0.00 43.37 2.43
164 165 2.358003 GCTCGTGCTTGGTGCTCT 60.358 61.111 1.41 0.00 43.37 4.09
165 166 3.426568 GGCTCGTGCTTGGTGCTC 61.427 66.667 9.61 0.00 43.37 4.26
187 188 4.735132 TTCGAGTTCGCCTGGCCG 62.735 66.667 14.12 10.54 39.60 6.13
188 189 2.815647 CTTCGAGTTCGCCTGGCC 60.816 66.667 14.12 0.00 39.60 5.36
189 190 3.491652 GCTTCGAGTTCGCCTGGC 61.492 66.667 9.11 9.11 39.60 4.85
190 191 1.630244 CTTGCTTCGAGTTCGCCTGG 61.630 60.000 0.00 0.00 39.60 4.45
191 192 1.630244 CCTTGCTTCGAGTTCGCCTG 61.630 60.000 0.00 0.00 39.60 4.85
192 193 1.374758 CCTTGCTTCGAGTTCGCCT 60.375 57.895 0.00 0.00 39.60 5.52
193 194 3.028366 GCCTTGCTTCGAGTTCGCC 62.028 63.158 0.00 0.00 39.60 5.54
194 195 1.960994 GAGCCTTGCTTCGAGTTCGC 61.961 60.000 0.00 0.00 39.88 4.70
195 196 0.389166 AGAGCCTTGCTTCGAGTTCG 60.389 55.000 0.00 0.00 39.88 3.95
196 197 1.355005 GAGAGCCTTGCTTCGAGTTC 58.645 55.000 0.00 0.00 39.88 3.01
197 198 0.389166 CGAGAGCCTTGCTTCGAGTT 60.389 55.000 12.20 0.00 39.88 3.01
198 199 1.214062 CGAGAGCCTTGCTTCGAGT 59.786 57.895 12.20 0.00 39.88 4.18
199 200 1.518133 CCGAGAGCCTTGCTTCGAG 60.518 63.158 16.52 7.75 39.88 4.04
200 201 2.573869 CCGAGAGCCTTGCTTCGA 59.426 61.111 16.52 0.00 39.88 3.71
201 202 3.191539 GCCGAGAGCCTTGCTTCG 61.192 66.667 11.20 11.20 39.88 3.79
210 211 4.087892 TTGCAGAGGGCCGAGAGC 62.088 66.667 0.00 1.73 43.89 4.09
211 212 2.125350 GTTGCAGAGGGCCGAGAG 60.125 66.667 0.00 0.00 43.89 3.20
212 213 3.706373 GGTTGCAGAGGGCCGAGA 61.706 66.667 0.00 0.00 43.89 4.04
217 218 3.842925 TTGGACGGTTGCAGAGGGC 62.843 63.158 0.00 0.00 45.13 5.19
218 219 1.966451 GTTGGACGGTTGCAGAGGG 60.966 63.158 0.00 0.00 0.00 4.30
219 220 0.320374 TAGTTGGACGGTTGCAGAGG 59.680 55.000 0.00 0.00 0.00 3.69
220 221 2.002586 CATAGTTGGACGGTTGCAGAG 58.997 52.381 0.00 0.00 0.00 3.35
221 222 1.621317 TCATAGTTGGACGGTTGCAGA 59.379 47.619 0.00 0.00 0.00 4.26
222 223 2.093306 TCATAGTTGGACGGTTGCAG 57.907 50.000 0.00 0.00 0.00 4.41
223 224 2.147958 GTTCATAGTTGGACGGTTGCA 58.852 47.619 0.00 0.00 0.00 4.08
224 225 2.423577 AGTTCATAGTTGGACGGTTGC 58.576 47.619 0.00 0.00 36.37 4.17
225 226 8.975439 GTATAATAGTTCATAGTTGGACGGTTG 58.025 37.037 0.00 0.00 36.37 3.77
226 227 8.698210 TGTATAATAGTTCATAGTTGGACGGTT 58.302 33.333 0.00 0.00 36.37 4.44
227 228 8.241497 TGTATAATAGTTCATAGTTGGACGGT 57.759 34.615 0.00 0.00 36.37 4.83
228 229 9.537192 TTTGTATAATAGTTCATAGTTGGACGG 57.463 33.333 0.00 0.00 36.37 4.79
249 250 7.552459 TGCACTACTTGTATATGCTCTTTGTA 58.448 34.615 14.20 0.00 37.20 2.41
256 257 4.707105 TGCATGCACTACTTGTATATGCT 58.293 39.130 18.46 3.09 42.54 3.79
293 294 6.975196 TGCCCAGTTGTAATATTGCATATT 57.025 33.333 7.08 0.00 38.83 1.28
298 299 4.718940 AGTTGCCCAGTTGTAATATTGC 57.281 40.909 0.00 0.00 0.00 3.56
336 337 2.096909 AGAAAAACGTCACTTGCGATCG 60.097 45.455 11.69 11.69 0.00 3.69
345 346 3.810941 TGTCACCCATAGAAAAACGTCAC 59.189 43.478 0.00 0.00 0.00 3.67
355 356 5.497464 TCATGAAGTTTGTCACCCATAGA 57.503 39.130 0.00 0.00 0.00 1.98
360 361 4.761739 TCTCATTCATGAAGTTTGTCACCC 59.238 41.667 14.54 0.00 36.18 4.61
361 362 5.615544 CGTCTCATTCATGAAGTTTGTCACC 60.616 44.000 14.54 0.00 36.18 4.02
363 364 5.177511 GTCGTCTCATTCATGAAGTTTGTCA 59.822 40.000 14.54 0.00 36.18 3.58
370 371 3.369147 GGTGTGTCGTCTCATTCATGAAG 59.631 47.826 14.54 6.44 36.18 3.02
371 372 3.325870 GGTGTGTCGTCTCATTCATGAA 58.674 45.455 11.26 11.26 36.18 2.57
389 390 4.278513 TTCCCCAGTTGCCCGGTG 62.279 66.667 0.00 0.00 0.00 4.94
399 400 3.612247 CTGACCCGTGCTTCCCCAG 62.612 68.421 0.00 0.00 0.00 4.45
401 402 4.410400 CCTGACCCGTGCTTCCCC 62.410 72.222 0.00 0.00 0.00 4.81
414 415 2.727544 GCTTTTGCAACCGCCTGA 59.272 55.556 0.00 0.00 46.58 3.86
468 472 1.260544 AGGCAGGGTGCTTCATTTTC 58.739 50.000 0.00 0.00 44.28 2.29
506 513 0.108041 GGGAAGACGCCGGTCAATTA 60.108 55.000 1.90 0.00 45.92 1.40
507 514 1.376812 GGGAAGACGCCGGTCAATT 60.377 57.895 1.90 0.00 45.92 2.32
593 603 4.828939 TGAATATGATGCCTGGATCAAACC 59.171 41.667 5.42 0.00 35.97 3.27
609 1109 6.183360 ACGAAACAAGTGGCAGTATGAATATG 60.183 38.462 0.00 0.00 39.69 1.78
610 1110 5.880332 ACGAAACAAGTGGCAGTATGAATAT 59.120 36.000 0.00 0.00 39.69 1.28
612 1112 4.072131 ACGAAACAAGTGGCAGTATGAAT 58.928 39.130 0.00 0.00 39.69 2.57
613 1113 3.249799 CACGAAACAAGTGGCAGTATGAA 59.750 43.478 0.00 0.00 38.34 2.57
751 1419 3.314693 ACTTGGACTTGGACTGGTCTAA 58.685 45.455 0.67 0.36 33.28 2.10
808 1476 9.125026 CAAATTTTGGATTACTAGTGAGCCTAT 57.875 33.333 21.09 10.24 0.00 2.57
908 1627 3.287222 GGTGGAATTTATAGCTGGCACA 58.713 45.455 0.00 0.00 0.00 4.57
914 1633 2.572290 GGCGTGGTGGAATTTATAGCT 58.428 47.619 0.00 0.00 0.00 3.32
949 1668 0.932123 CGACGATCGAGCTGATGTGG 60.932 60.000 24.34 0.00 43.74 4.17
951 1670 1.298713 GCGACGATCGAGCTGATGT 60.299 57.895 24.34 0.00 43.74 3.06
1038 1796 1.484444 AAAGGGAGAAGAGCAGCGGT 61.484 55.000 0.00 0.00 0.00 5.68
1057 1818 3.712907 GGCTGCCCGGTTACCTGA 61.713 66.667 7.66 0.00 0.00 3.86
1094 1859 4.571580 ACGTATGAAACCTCGAAAACACAA 59.428 37.500 0.00 0.00 0.00 3.33
1127 1967 3.684103 ACGTGTACACCAACAAACATG 57.316 42.857 20.11 4.69 35.46 3.21
1174 2017 2.045438 CCCATAGCACACGCCCAA 60.045 61.111 0.00 0.00 39.83 4.12
1317 2160 0.541063 TCAGCTCCACCGTCACCTTA 60.541 55.000 0.00 0.00 0.00 2.69
1439 2282 0.595053 CTCGTTCCCGATCATCACCG 60.595 60.000 0.00 0.00 43.27 4.94
1440 2283 0.249489 CCTCGTTCCCGATCATCACC 60.249 60.000 0.00 0.00 43.27 4.02
1445 2288 2.358039 AACACCTCGTTCCCGATCA 58.642 52.632 0.00 0.00 43.27 2.92
1479 2322 1.135333 GGGACGAGCTGAGAGTTTAGG 59.865 57.143 0.00 0.00 0.00 2.69
1500 2343 0.323178 CCTGCACCTTCTTCATGGCT 60.323 55.000 0.00 0.00 0.00 4.75
1529 2372 4.659172 CCGCCAGGCCCAGTTTCA 62.659 66.667 5.63 0.00 0.00 2.69
1530 2373 4.344865 TCCGCCAGGCCCAGTTTC 62.345 66.667 5.63 0.00 37.47 2.78
1584 2427 1.890894 CGGGAATGACGTCTGGAGT 59.109 57.895 17.92 0.00 0.00 3.85
1588 2431 1.153369 ATGGCGGGAATGACGTCTG 60.153 57.895 17.92 0.00 36.79 3.51
1617 2460 1.991430 CGCGATGTCGTCCTTGAAG 59.009 57.895 0.00 0.00 42.22 3.02
1641 2484 0.463204 CGAGCATGGGACTCATCACT 59.537 55.000 0.00 0.00 32.92 3.41
1650 2493 1.821216 GGAAAAAGTCGAGCATGGGA 58.179 50.000 0.00 0.00 0.00 4.37
1657 2500 2.059541 GGTCTGTCGGAAAAAGTCGAG 58.940 52.381 0.00 0.00 36.00 4.04
1670 2513 4.876652 GGTACGAACCGGTCTGTC 57.123 61.111 8.04 0.00 35.62 3.51
1690 2533 2.381911 GTATGGGTAGAGGTTCACCGA 58.618 52.381 0.00 0.00 42.08 4.69
1691 2534 1.411612 GGTATGGGTAGAGGTTCACCG 59.588 57.143 0.00 0.00 42.08 4.94
1699 2542 1.534595 GTACGCGAGGTATGGGTAGAG 59.465 57.143 15.93 0.00 35.72 2.43
1737 2580 5.046529 CGGAACAAGAGATAGTTGATGGAG 58.953 45.833 0.00 0.00 0.00 3.86
1785 2628 2.735478 TACGTTTGCCCGCTGACG 60.735 61.111 0.00 11.82 41.00 4.35
1788 2631 1.225376 TGAAGTACGTTTGCCCGCTG 61.225 55.000 0.00 0.00 0.00 5.18
1824 2667 2.492088 TGCATAGTAGACTGCGTCAAGT 59.508 45.455 10.52 0.00 41.32 3.16
1845 2688 2.357569 GGAGGATGGCAACTTCTCCATT 60.358 50.000 10.09 0.00 42.74 3.16
1855 2698 1.304282 GAAGGCTGGAGGATGGCAA 59.696 57.895 0.00 0.00 0.00 4.52
1860 2703 4.537433 GCGCGAAGGCTGGAGGAT 62.537 66.667 12.10 0.00 36.88 3.24
1906 2749 2.404215 CGCTTCTGTGGTTATATCGGG 58.596 52.381 0.00 0.00 0.00 5.14
1907 2750 1.792949 GCGCTTCTGTGGTTATATCGG 59.207 52.381 0.00 0.00 0.00 4.18
1910 2753 2.100916 ACTCGCGCTTCTGTGGTTATAT 59.899 45.455 5.56 0.00 0.00 0.86
1911 2754 1.475280 ACTCGCGCTTCTGTGGTTATA 59.525 47.619 5.56 0.00 0.00 0.98
1912 2755 0.246635 ACTCGCGCTTCTGTGGTTAT 59.753 50.000 5.56 0.00 0.00 1.89
1913 2756 0.032952 AACTCGCGCTTCTGTGGTTA 59.967 50.000 5.56 0.00 0.00 2.85
1918 2761 0.032130 TCTGAAACTCGCGCTTCTGT 59.968 50.000 5.56 0.00 0.00 3.41
1923 2766 2.262915 CCCTCTGAAACTCGCGCT 59.737 61.111 5.56 0.00 0.00 5.92
1925 2768 2.048222 TGCCCTCTGAAACTCGCG 60.048 61.111 0.00 0.00 0.00 5.87
1928 2771 1.943507 GCTGACTGCCCTCTGAAACTC 60.944 57.143 0.00 0.00 35.15 3.01
1929 2772 0.036022 GCTGACTGCCCTCTGAAACT 59.964 55.000 0.00 0.00 35.15 2.66
1930 2773 2.549332 GCTGACTGCCCTCTGAAAC 58.451 57.895 0.00 0.00 35.15 2.78
1942 2785 0.555769 TTTCCCTGGTTTGGCTGACT 59.444 50.000 0.00 0.00 0.00 3.41
1944 2787 1.146774 TGATTTCCCTGGTTTGGCTGA 59.853 47.619 0.00 0.00 0.00 4.26
1947 2790 2.094026 GTCATGATTTCCCTGGTTTGGC 60.094 50.000 0.00 0.00 0.00 4.52
1954 2797 1.065491 TCCCACGTCATGATTTCCCTG 60.065 52.381 0.00 0.00 0.00 4.45
1956 2799 1.743394 GTTCCCACGTCATGATTTCCC 59.257 52.381 0.00 0.00 0.00 3.97
1959 2802 1.615919 GGGGTTCCCACGTCATGATTT 60.616 52.381 10.25 0.00 44.65 2.17
1960 2803 0.034477 GGGGTTCCCACGTCATGATT 60.034 55.000 10.25 0.00 44.65 2.57
1962 2805 3.074281 GGGGTTCCCACGTCATGA 58.926 61.111 10.25 0.00 44.65 3.07
2031 2883 1.270414 TTCCATTTACGGCGGGGGTA 61.270 55.000 13.24 0.00 0.00 3.69
2035 2887 0.450184 CTGTTTCCATTTACGGCGGG 59.550 55.000 13.24 1.57 0.00 6.13
2042 2894 1.173043 CAGCGGGCTGTTTCCATTTA 58.827 50.000 12.42 0.00 39.10 1.40
2101 2953 2.753452 AGATGTACACGTTGAGATCGGT 59.247 45.455 0.00 0.00 0.00 4.69
2151 3003 1.668151 AAAGTTCTGCTCGTCCGCC 60.668 57.895 0.00 0.00 0.00 6.13
2154 3006 0.250338 ACCCAAAGTTCTGCTCGTCC 60.250 55.000 0.00 0.00 0.00 4.79
2252 3106 2.703409 CCACGCAATAGCTCGCAC 59.297 61.111 0.00 0.00 39.10 5.34
2253 3107 3.195002 GCCACGCAATAGCTCGCA 61.195 61.111 0.00 0.00 39.10 5.10
2400 3278 3.065925 GGTAGTAGTCGTTGAAGGCGTAT 59.934 47.826 0.00 0.00 0.00 3.06
2547 3598 2.899339 GCCATCTGAAGCCGAGCC 60.899 66.667 0.00 0.00 0.00 4.70
2556 3607 1.475034 GCGTAATCAAGGGCCATCTGA 60.475 52.381 6.18 5.81 0.00 3.27
2561 3612 1.743623 CACGCGTAATCAAGGGCCA 60.744 57.895 13.44 0.00 0.00 5.36
2568 3619 4.743975 TGCCCGCACGCGTAATCA 62.744 61.111 13.44 2.87 37.81 2.57
2667 3718 3.454375 CCGCTGGTAATAGTCGTTGAAT 58.546 45.455 0.00 0.00 0.00 2.57
2732 3783 2.672996 GTGCCTGCCGGACAATGT 60.673 61.111 5.05 0.00 0.00 2.71
2760 3811 4.705507 ACTAGACTCTGGAATTACGAGCAA 59.294 41.667 0.00 0.00 0.00 3.91
2766 3819 9.490379 TTTCTTGAAACTAGACTCTGGAATTAC 57.510 33.333 0.00 0.00 0.00 1.89
2805 3870 5.385509 AAATCACCATTAACAAACCGAGG 57.614 39.130 0.00 0.00 0.00 4.63
2806 3871 5.086058 CGAAATCACCATTAACAAACCGAG 58.914 41.667 0.00 0.00 0.00 4.63
2831 3897 2.092592 AGAGTGGAAGAAACAAACCCGT 60.093 45.455 0.00 0.00 0.00 5.28
2832 3898 2.572290 AGAGTGGAAGAAACAAACCCG 58.428 47.619 0.00 0.00 0.00 5.28
2833 3899 4.202121 GGAAAGAGTGGAAGAAACAAACCC 60.202 45.833 0.00 0.00 0.00 4.11
2834 3900 4.401202 TGGAAAGAGTGGAAGAAACAAACC 59.599 41.667 0.00 0.00 0.00 3.27
2835 3901 5.357032 TCTGGAAAGAGTGGAAGAAACAAAC 59.643 40.000 0.00 0.00 0.00 2.93
2836 3902 5.505780 TCTGGAAAGAGTGGAAGAAACAAA 58.494 37.500 0.00 0.00 0.00 2.83
2837 3903 5.104527 TCTCTGGAAAGAGTGGAAGAAACAA 60.105 40.000 2.86 0.00 37.23 2.83
2838 3904 4.408921 TCTCTGGAAAGAGTGGAAGAAACA 59.591 41.667 2.86 0.00 37.23 2.83
2839 3905 4.962155 TCTCTGGAAAGAGTGGAAGAAAC 58.038 43.478 2.86 0.00 37.23 2.78
2840 3906 5.567623 CGATCTCTGGAAAGAGTGGAAGAAA 60.568 44.000 2.86 0.00 37.23 2.52
2841 3907 4.081972 CGATCTCTGGAAAGAGTGGAAGAA 60.082 45.833 2.86 0.00 37.23 2.52
2842 3908 3.445450 CGATCTCTGGAAAGAGTGGAAGA 59.555 47.826 2.86 0.00 37.23 2.87
2843 3909 3.430098 CCGATCTCTGGAAAGAGTGGAAG 60.430 52.174 2.86 0.00 37.23 3.46
2844 3910 2.497675 CCGATCTCTGGAAAGAGTGGAA 59.502 50.000 2.86 0.00 37.23 3.53
2855 3921 2.169789 CGCAGTTGCCGATCTCTGG 61.170 63.158 0.00 0.00 37.91 3.86
2894 3961 2.548480 GCAGTTTCTTCAGTTTACGGCT 59.452 45.455 0.00 0.00 0.00 5.52
2895 3962 2.289547 TGCAGTTTCTTCAGTTTACGGC 59.710 45.455 0.00 0.00 0.00 5.68
2896 3963 3.607078 GCTGCAGTTTCTTCAGTTTACGG 60.607 47.826 16.64 0.00 0.00 4.02
2897 3964 3.545633 GCTGCAGTTTCTTCAGTTTACG 58.454 45.455 16.64 0.00 0.00 3.18
2898 3965 3.315191 TGGCTGCAGTTTCTTCAGTTTAC 59.685 43.478 16.64 0.00 0.00 2.01
2899 3966 3.550820 TGGCTGCAGTTTCTTCAGTTTA 58.449 40.909 16.64 0.00 0.00 2.01
2900 3967 2.378038 TGGCTGCAGTTTCTTCAGTTT 58.622 42.857 16.64 0.00 0.00 2.66
2901 3968 2.057137 TGGCTGCAGTTTCTTCAGTT 57.943 45.000 16.64 0.00 0.00 3.16
2914 3987 2.875804 AAAGCTTGGCCTTGGCTGC 61.876 57.895 15.93 12.76 36.37 5.25
2915 3988 1.005394 CAAAGCTTGGCCTTGGCTG 60.005 57.895 15.93 3.91 36.37 4.85
2942 4020 9.715121 AATTTGTTGACAGCAAATGATTAATCT 57.285 25.926 25.13 9.05 43.30 2.40
2943 4021 9.962759 GAATTTGTTGACAGCAAATGATTAATC 57.037 29.630 25.13 16.14 43.30 1.75
2944 4022 9.715121 AGAATTTGTTGACAGCAAATGATTAAT 57.285 25.926 25.13 12.37 43.30 1.40
2953 4039 7.542890 TGAAAACTAGAATTTGTTGACAGCAA 58.457 30.769 0.00 0.00 0.00 3.91
3001 4087 9.354673 CCATAGGGCAAAAAGAAAATAGATAGA 57.645 33.333 0.00 0.00 0.00 1.98
3002 4088 9.354673 TCCATAGGGCAAAAAGAAAATAGATAG 57.645 33.333 0.00 0.00 0.00 2.08
3003 4089 9.881773 ATCCATAGGGCAAAAAGAAAATAGATA 57.118 29.630 0.00 0.00 0.00 1.98
3004 4090 8.788238 ATCCATAGGGCAAAAAGAAAATAGAT 57.212 30.769 0.00 0.00 0.00 1.98
3005 4091 8.608185 AATCCATAGGGCAAAAAGAAAATAGA 57.392 30.769 0.00 0.00 0.00 1.98
3006 4092 9.750125 GTAATCCATAGGGCAAAAAGAAAATAG 57.250 33.333 0.00 0.00 0.00 1.73
3007 4093 8.700973 GGTAATCCATAGGGCAAAAAGAAAATA 58.299 33.333 0.00 0.00 0.00 1.40
3008 4094 7.181845 TGGTAATCCATAGGGCAAAAAGAAAAT 59.818 33.333 0.00 0.00 39.03 1.82
3009 4095 6.498651 TGGTAATCCATAGGGCAAAAAGAAAA 59.501 34.615 0.00 0.00 39.03 2.29
3010 4096 6.019748 TGGTAATCCATAGGGCAAAAAGAAA 58.980 36.000 0.00 0.00 39.03 2.52
3011 4097 5.584913 TGGTAATCCATAGGGCAAAAAGAA 58.415 37.500 0.00 0.00 39.03 2.52
3012 4098 5.199982 TGGTAATCCATAGGGCAAAAAGA 57.800 39.130 0.00 0.00 39.03 2.52
3026 4112 2.166254 CACAAGGTTGGCATGGTAATCC 59.834 50.000 0.00 0.00 0.00 3.01
3027 4113 2.825532 ACACAAGGTTGGCATGGTAATC 59.174 45.455 0.00 0.00 0.00 1.75
3028 4114 2.825532 GACACAAGGTTGGCATGGTAAT 59.174 45.455 0.00 0.00 0.00 1.89
3029 4115 2.158534 AGACACAAGGTTGGCATGGTAA 60.159 45.455 0.00 0.00 0.00 2.85
3030 4116 1.423541 AGACACAAGGTTGGCATGGTA 59.576 47.619 0.00 0.00 0.00 3.25
3031 4117 0.185901 AGACACAAGGTTGGCATGGT 59.814 50.000 0.00 0.00 0.00 3.55
3032 4118 2.086869 CTAGACACAAGGTTGGCATGG 58.913 52.381 0.00 0.00 0.00 3.66
3033 4119 2.744202 GTCTAGACACAAGGTTGGCATG 59.256 50.000 18.20 0.00 0.00 4.06
3034 4120 2.639839 AGTCTAGACACAAGGTTGGCAT 59.360 45.455 24.44 0.00 0.00 4.40
3035 4121 2.047061 AGTCTAGACACAAGGTTGGCA 58.953 47.619 24.44 0.00 0.00 4.92
3036 4122 2.841442 AGTCTAGACACAAGGTTGGC 57.159 50.000 24.44 0.00 0.00 4.52
3037 4123 4.261197 GCAAAAGTCTAGACACAAGGTTGG 60.261 45.833 24.44 7.37 0.00 3.77
3038 4124 4.576463 AGCAAAAGTCTAGACACAAGGTTG 59.424 41.667 24.44 17.01 0.00 3.77
3039 4125 4.781934 AGCAAAAGTCTAGACACAAGGTT 58.218 39.130 24.44 6.33 0.00 3.50
3040 4126 4.423625 AGCAAAAGTCTAGACACAAGGT 57.576 40.909 24.44 13.60 0.00 3.50
3041 4127 5.296780 TGAAAGCAAAAGTCTAGACACAAGG 59.703 40.000 24.44 10.71 0.00 3.61
3042 4128 6.363577 TGAAAGCAAAAGTCTAGACACAAG 57.636 37.500 24.44 12.35 0.00 3.16
3043 4129 6.751514 TTGAAAGCAAAAGTCTAGACACAA 57.248 33.333 24.44 12.04 0.00 3.33
3044 4130 6.374333 AGTTTGAAAGCAAAAGTCTAGACACA 59.626 34.615 24.44 7.43 44.91 3.72
3045 4131 6.786207 AGTTTGAAAGCAAAAGTCTAGACAC 58.214 36.000 24.44 9.03 44.91 3.67
3046 4132 7.391148 AAGTTTGAAAGCAAAAGTCTAGACA 57.609 32.000 24.44 0.00 44.91 3.41
3047 4133 9.783256 TTAAAGTTTGAAAGCAAAAGTCTAGAC 57.217 29.630 15.41 15.41 44.91 2.59
3048 4134 9.783256 GTTAAAGTTTGAAAGCAAAAGTCTAGA 57.217 29.630 0.00 0.00 44.91 2.43
3049 4135 9.788960 AGTTAAAGTTTGAAAGCAAAAGTCTAG 57.211 29.630 0.00 0.00 44.91 2.43
3050 4136 9.567848 CAGTTAAAGTTTGAAAGCAAAAGTCTA 57.432 29.630 0.00 0.00 44.91 2.59
3051 4137 8.303876 TCAGTTAAAGTTTGAAAGCAAAAGTCT 58.696 29.630 0.00 0.00 44.91 3.24
3052 4138 8.460831 TCAGTTAAAGTTTGAAAGCAAAAGTC 57.539 30.769 0.00 0.00 44.91 3.01
3053 4139 8.872845 CATCAGTTAAAGTTTGAAAGCAAAAGT 58.127 29.630 0.00 0.00 44.91 2.66
3054 4140 8.330302 CCATCAGTTAAAGTTTGAAAGCAAAAG 58.670 33.333 0.00 0.00 44.91 2.27
3055 4141 8.037758 TCCATCAGTTAAAGTTTGAAAGCAAAA 58.962 29.630 0.00 0.00 44.91 2.44
3056 4142 7.551585 TCCATCAGTTAAAGTTTGAAAGCAAA 58.448 30.769 0.00 0.00 41.47 3.68
3057 4143 7.106439 TCCATCAGTTAAAGTTTGAAAGCAA 57.894 32.000 0.00 0.00 0.00 3.91
3058 4144 6.707440 TCCATCAGTTAAAGTTTGAAAGCA 57.293 33.333 0.00 0.00 0.00 3.91
3059 4145 5.631096 GCTCCATCAGTTAAAGTTTGAAAGC 59.369 40.000 0.00 0.00 0.00 3.51
3060 4146 6.738114 TGCTCCATCAGTTAAAGTTTGAAAG 58.262 36.000 0.00 0.00 0.00 2.62
3061 4147 6.707440 TGCTCCATCAGTTAAAGTTTGAAA 57.293 33.333 0.00 0.00 0.00 2.69
3062 4148 6.707440 TTGCTCCATCAGTTAAAGTTTGAA 57.293 33.333 0.00 0.00 0.00 2.69
3063 4149 6.899393 ATTGCTCCATCAGTTAAAGTTTGA 57.101 33.333 0.00 0.00 0.00 2.69
3064 4150 9.294030 GAATATTGCTCCATCAGTTAAAGTTTG 57.706 33.333 0.00 0.00 0.00 2.93
3065 4151 9.247861 AGAATATTGCTCCATCAGTTAAAGTTT 57.752 29.630 0.00 0.00 0.00 2.66
3066 4152 8.814038 AGAATATTGCTCCATCAGTTAAAGTT 57.186 30.769 0.00 0.00 0.00 2.66
3067 4153 9.905713 TTAGAATATTGCTCCATCAGTTAAAGT 57.094 29.630 0.00 0.00 0.00 2.66
3097 4183 9.478768 TCTCACTACGTGATGTGTTTTTATTTA 57.521 29.630 14.56 0.00 41.94 1.40
3098 4184 8.373048 TCTCACTACGTGATGTGTTTTTATTT 57.627 30.769 14.56 0.00 41.94 1.40
3099 4185 7.956420 TCTCACTACGTGATGTGTTTTTATT 57.044 32.000 14.56 0.00 41.94 1.40
3100 4186 7.956420 TTCTCACTACGTGATGTGTTTTTAT 57.044 32.000 14.56 0.00 41.94 1.40
3101 4187 7.956420 ATTCTCACTACGTGATGTGTTTTTA 57.044 32.000 14.56 0.00 41.94 1.52
3102 4188 6.861065 ATTCTCACTACGTGATGTGTTTTT 57.139 33.333 14.56 1.75 41.94 1.94
3103 4189 7.956420 TTATTCTCACTACGTGATGTGTTTT 57.044 32.000 14.56 5.26 41.94 2.43
3104 4190 8.547967 AATTATTCTCACTACGTGATGTGTTT 57.452 30.769 14.56 3.45 41.94 2.83
3105 4191 9.084164 GTAATTATTCTCACTACGTGATGTGTT 57.916 33.333 14.56 5.95 41.94 3.32
3106 4192 8.467598 AGTAATTATTCTCACTACGTGATGTGT 58.532 33.333 14.56 2.74 41.94 3.72
3107 4193 8.858003 AGTAATTATTCTCACTACGTGATGTG 57.142 34.615 0.00 5.05 41.94 3.21
3108 4194 9.517609 GAAGTAATTATTCTCACTACGTGATGT 57.482 33.333 0.00 0.00 41.94 3.06
3109 4195 8.969267 GGAAGTAATTATTCTCACTACGTGATG 58.031 37.037 0.00 0.00 41.94 3.07
3110 4196 8.692710 TGGAAGTAATTATTCTCACTACGTGAT 58.307 33.333 0.00 0.00 41.94 3.06
3111 4197 8.058667 TGGAAGTAATTATTCTCACTACGTGA 57.941 34.615 0.00 0.00 40.50 4.35
3112 4198 8.697846 TTGGAAGTAATTATTCTCACTACGTG 57.302 34.615 0.00 0.00 34.45 4.49
3113 4199 9.148104 GTTTGGAAGTAATTATTCTCACTACGT 57.852 33.333 0.00 0.00 0.00 3.57
3114 4200 8.601476 GGTTTGGAAGTAATTATTCTCACTACG 58.399 37.037 0.00 0.00 0.00 3.51
3115 4201 8.601476 CGGTTTGGAAGTAATTATTCTCACTAC 58.399 37.037 0.00 0.00 0.00 2.73
3116 4202 8.533657 TCGGTTTGGAAGTAATTATTCTCACTA 58.466 33.333 0.00 0.00 0.00 2.74
3117 4203 7.391620 TCGGTTTGGAAGTAATTATTCTCACT 58.608 34.615 0.00 0.00 0.00 3.41
3118 4204 7.605410 TCGGTTTGGAAGTAATTATTCTCAC 57.395 36.000 0.00 0.00 0.00 3.51
3119 4205 8.801882 AATCGGTTTGGAAGTAATTATTCTCA 57.198 30.769 0.00 0.00 0.00 3.27
3122 4208 9.849166 TGAAAATCGGTTTGGAAGTAATTATTC 57.151 29.630 0.00 0.00 0.00 1.75
3125 4211 9.849166 GATTGAAAATCGGTTTGGAAGTAATTA 57.151 29.630 0.00 0.00 0.00 1.40
3126 4212 7.817478 GGATTGAAAATCGGTTTGGAAGTAATT 59.183 33.333 0.00 0.00 0.00 1.40
3127 4213 7.320399 GGATTGAAAATCGGTTTGGAAGTAAT 58.680 34.615 0.00 0.00 0.00 1.89
3128 4214 6.294843 GGGATTGAAAATCGGTTTGGAAGTAA 60.295 38.462 0.00 0.00 0.00 2.24
3129 4215 5.184287 GGGATTGAAAATCGGTTTGGAAGTA 59.816 40.000 0.00 0.00 0.00 2.24
3130 4216 4.021456 GGGATTGAAAATCGGTTTGGAAGT 60.021 41.667 0.00 0.00 0.00 3.01
3131 4217 4.220602 AGGGATTGAAAATCGGTTTGGAAG 59.779 41.667 0.00 0.00 0.00 3.46
3132 4218 4.156477 AGGGATTGAAAATCGGTTTGGAA 58.844 39.130 0.00 0.00 0.00 3.53
3133 4219 3.773560 AGGGATTGAAAATCGGTTTGGA 58.226 40.909 0.00 0.00 0.00 3.53
3134 4220 4.535526 AAGGGATTGAAAATCGGTTTGG 57.464 40.909 0.00 0.00 0.00 3.28
3135 4221 7.870445 TCTTTAAAGGGATTGAAAATCGGTTTG 59.130 33.333 15.13 0.00 0.00 2.93
3136 4222 7.958088 TCTTTAAAGGGATTGAAAATCGGTTT 58.042 30.769 15.13 0.00 0.00 3.27
3137 4223 7.232737 ACTCTTTAAAGGGATTGAAAATCGGTT 59.767 33.333 22.02 0.00 0.00 4.44
3138 4224 6.719829 ACTCTTTAAAGGGATTGAAAATCGGT 59.280 34.615 22.02 0.00 0.00 4.69
3139 4225 7.158099 ACTCTTTAAAGGGATTGAAAATCGG 57.842 36.000 22.02 0.00 0.00 4.18
3145 4231 9.227777 GCTACTTTACTCTTTAAAGGGATTGAA 57.772 33.333 22.02 7.15 38.48 2.69
3146 4232 8.603304 AGCTACTTTACTCTTTAAAGGGATTGA 58.397 33.333 22.02 3.96 38.48 2.57
3147 4233 8.794335 AGCTACTTTACTCTTTAAAGGGATTG 57.206 34.615 22.02 10.47 38.48 2.67
3176 4262 7.922278 GGAAACCTTAACCGAATTGTAGTTTTT 59.078 33.333 0.00 0.00 0.00 1.94
3177 4263 7.068470 TGGAAACCTTAACCGAATTGTAGTTTT 59.932 33.333 0.00 0.00 0.00 2.43
3178 4264 6.546772 TGGAAACCTTAACCGAATTGTAGTTT 59.453 34.615 0.00 0.00 0.00 2.66
3179 4265 6.016860 GTGGAAACCTTAACCGAATTGTAGTT 60.017 38.462 0.00 0.00 0.00 2.24
3180 4266 5.471116 GTGGAAACCTTAACCGAATTGTAGT 59.529 40.000 0.00 0.00 0.00 2.73
3181 4267 5.470777 TGTGGAAACCTTAACCGAATTGTAG 59.529 40.000 0.00 0.00 0.00 2.74
3182 4268 5.374921 TGTGGAAACCTTAACCGAATTGTA 58.625 37.500 0.00 0.00 0.00 2.41
3183 4269 4.208746 TGTGGAAACCTTAACCGAATTGT 58.791 39.130 0.00 0.00 0.00 2.71
3184 4270 4.839668 TGTGGAAACCTTAACCGAATTG 57.160 40.909 0.00 0.00 0.00 2.32
3185 4271 5.855740 TTTGTGGAAACCTTAACCGAATT 57.144 34.783 0.00 0.00 0.00 2.17
3186 4272 5.536916 TGATTTGTGGAAACCTTAACCGAAT 59.463 36.000 0.00 0.00 0.00 3.34
3187 4273 4.888239 TGATTTGTGGAAACCTTAACCGAA 59.112 37.500 0.00 0.00 0.00 4.30
3188 4274 4.276431 GTGATTTGTGGAAACCTTAACCGA 59.724 41.667 0.00 0.00 0.00 4.69
3189 4275 4.277423 AGTGATTTGTGGAAACCTTAACCG 59.723 41.667 0.00 0.00 0.00 4.44
3190 4276 5.528870 CAGTGATTTGTGGAAACCTTAACC 58.471 41.667 0.00 0.00 0.00 2.85
3191 4277 4.982295 GCAGTGATTTGTGGAAACCTTAAC 59.018 41.667 0.00 0.00 0.00 2.01
3192 4278 4.892934 AGCAGTGATTTGTGGAAACCTTAA 59.107 37.500 0.00 0.00 0.00 1.85
3193 4279 4.469657 AGCAGTGATTTGTGGAAACCTTA 58.530 39.130 0.00 0.00 0.00 2.69
3194 4280 3.299503 AGCAGTGATTTGTGGAAACCTT 58.700 40.909 0.00 0.00 0.00 3.50
3195 4281 2.949447 AGCAGTGATTTGTGGAAACCT 58.051 42.857 0.00 0.00 0.00 3.50
3196 4282 3.068024 TGAAGCAGTGATTTGTGGAAACC 59.932 43.478 0.00 0.00 0.00 3.27
3197 4283 4.305989 TGAAGCAGTGATTTGTGGAAAC 57.694 40.909 0.00 0.00 0.00 2.78
3198 4284 4.998671 TTGAAGCAGTGATTTGTGGAAA 57.001 36.364 0.00 0.00 0.00 3.13
3199 4285 4.998671 TTTGAAGCAGTGATTTGTGGAA 57.001 36.364 0.00 0.00 0.00 3.53
3200 4286 4.998671 TTTTGAAGCAGTGATTTGTGGA 57.001 36.364 0.00 0.00 0.00 4.02
3221 4307 1.486439 CGCTGGTGCACGAAATTTTT 58.514 45.000 11.45 0.00 39.64 1.94
3222 4308 0.318614 CCGCTGGTGCACGAAATTTT 60.319 50.000 11.45 0.00 39.64 1.82
3223 4309 1.285641 CCGCTGGTGCACGAAATTT 59.714 52.632 11.45 0.00 39.64 1.82
3224 4310 2.625823 CCCGCTGGTGCACGAAATT 61.626 57.895 11.45 0.00 39.64 1.82
3225 4311 3.055719 CCCGCTGGTGCACGAAAT 61.056 61.111 11.45 0.00 39.64 2.17
3226 4312 4.243008 TCCCGCTGGTGCACGAAA 62.243 61.111 11.45 0.00 39.64 3.46
3227 4313 4.680237 CTCCCGCTGGTGCACGAA 62.680 66.667 11.45 0.13 39.64 3.85
3239 4325 0.460284 ATAACGTTGCTCAGCTCCCG 60.460 55.000 11.99 0.00 0.00 5.14
3240 4326 1.009829 CATAACGTTGCTCAGCTCCC 58.990 55.000 11.99 0.00 0.00 4.30
3241 4327 1.726853 ACATAACGTTGCTCAGCTCC 58.273 50.000 11.99 0.00 0.00 4.70
3251 4337 6.163476 TGCTATTCAGAGTCAACATAACGTT 58.837 36.000 5.88 5.88 38.83 3.99
3252 4338 5.720202 TGCTATTCAGAGTCAACATAACGT 58.280 37.500 0.00 0.00 0.00 3.99
3253 4339 6.647212 TTGCTATTCAGAGTCAACATAACG 57.353 37.500 0.00 0.00 0.00 3.18
3256 4342 9.276590 CCATATTTGCTATTCAGAGTCAACATA 57.723 33.333 0.00 0.00 0.00 2.29
3257 4343 7.230108 CCCATATTTGCTATTCAGAGTCAACAT 59.770 37.037 0.00 0.00 0.00 2.71
3258 4344 6.543465 CCCATATTTGCTATTCAGAGTCAACA 59.457 38.462 0.00 0.00 0.00 3.33
3259 4345 6.767902 TCCCATATTTGCTATTCAGAGTCAAC 59.232 38.462 0.00 0.00 0.00 3.18
3260 4346 6.899089 TCCCATATTTGCTATTCAGAGTCAA 58.101 36.000 0.00 0.00 0.00 3.18
3261 4347 6.499106 TCCCATATTTGCTATTCAGAGTCA 57.501 37.500 0.00 0.00 0.00 3.41
3262 4348 6.128063 GCATCCCATATTTGCTATTCAGAGTC 60.128 42.308 0.00 0.00 33.61 3.36
3263 4349 5.709164 GCATCCCATATTTGCTATTCAGAGT 59.291 40.000 0.00 0.00 33.61 3.24
3264 4350 5.708697 TGCATCCCATATTTGCTATTCAGAG 59.291 40.000 0.00 0.00 37.28 3.35
3265 4351 5.633117 TGCATCCCATATTTGCTATTCAGA 58.367 37.500 0.00 0.00 37.28 3.27
3266 4352 5.970317 TGCATCCCATATTTGCTATTCAG 57.030 39.130 0.00 0.00 37.28 3.02
3267 4353 8.419922 TTTATGCATCCCATATTTGCTATTCA 57.580 30.769 0.19 0.00 36.35 2.57
3268 4354 9.880157 AATTTATGCATCCCATATTTGCTATTC 57.120 29.630 0.19 0.00 36.35 1.75
3272 4358 9.661563 CATTAATTTATGCATCCCATATTTGCT 57.338 29.630 0.19 0.00 36.35 3.91
3273 4359 8.885722 CCATTAATTTATGCATCCCATATTTGC 58.114 33.333 0.19 0.00 36.35 3.68
3276 4362 9.772605 TCTCCATTAATTTATGCATCCCATATT 57.227 29.630 0.19 0.00 36.35 1.28
3277 4363 9.947189 ATCTCCATTAATTTATGCATCCCATAT 57.053 29.630 0.19 0.00 36.35 1.78
3278 4364 9.772605 AATCTCCATTAATTTATGCATCCCATA 57.227 29.630 0.19 0.00 35.34 2.74
3279 4365 8.537016 CAATCTCCATTAATTTATGCATCCCAT 58.463 33.333 0.19 0.00 37.97 4.00
3280 4366 7.525859 GCAATCTCCATTAATTTATGCATCCCA 60.526 37.037 0.19 0.00 0.00 4.37
3281 4367 6.815142 GCAATCTCCATTAATTTATGCATCCC 59.185 38.462 0.19 0.00 0.00 3.85
3282 4368 7.380536 TGCAATCTCCATTAATTTATGCATCC 58.619 34.615 0.19 0.00 36.46 3.51
3283 4369 8.821147 TTGCAATCTCCATTAATTTATGCATC 57.179 30.769 0.19 0.00 40.50 3.91
3284 4370 9.787435 ATTTGCAATCTCCATTAATTTATGCAT 57.213 25.926 3.79 3.79 40.50 3.96
3285 4371 9.047371 CATTTGCAATCTCCATTAATTTATGCA 57.953 29.630 0.00 0.00 39.28 3.96
3286 4372 9.048446 ACATTTGCAATCTCCATTAATTTATGC 57.952 29.630 0.00 0.00 0.00 3.14
3293 4379 9.407380 AGTATGTACATTTGCAATCTCCATTAA 57.593 29.630 14.77 0.00 0.00 1.40
3294 4380 8.978874 AGTATGTACATTTGCAATCTCCATTA 57.021 30.769 14.77 0.00 0.00 1.90
3295 4381 7.886629 AGTATGTACATTTGCAATCTCCATT 57.113 32.000 14.77 0.00 0.00 3.16
3296 4382 8.978874 TTAGTATGTACATTTGCAATCTCCAT 57.021 30.769 14.77 2.38 0.00 3.41
3297 4383 8.673711 GTTTAGTATGTACATTTGCAATCTCCA 58.326 33.333 14.77 0.00 0.00 3.86
3298 4384 8.673711 TGTTTAGTATGTACATTTGCAATCTCC 58.326 33.333 14.77 0.00 0.00 3.71
3300 4386 9.840427 GTTGTTTAGTATGTACATTTGCAATCT 57.160 29.630 14.77 4.66 0.00 2.40
3301 4387 9.840427 AGTTGTTTAGTATGTACATTTGCAATC 57.160 29.630 14.77 4.06 0.00 2.67
3302 4388 9.840427 GAGTTGTTTAGTATGTACATTTGCAAT 57.160 29.630 14.77 0.00 0.00 3.56
3303 4389 9.062524 AGAGTTGTTTAGTATGTACATTTGCAA 57.937 29.630 14.77 8.40 0.00 4.08
3304 4390 8.615878 AGAGTTGTTTAGTATGTACATTTGCA 57.384 30.769 14.77 2.82 0.00 4.08
3305 4391 8.936864 AGAGAGTTGTTTAGTATGTACATTTGC 58.063 33.333 14.77 5.25 0.00 3.68
3309 4395 9.640963 GTGAAGAGAGTTGTTTAGTATGTACAT 57.359 33.333 13.93 13.93 0.00 2.29
3310 4396 8.857098 AGTGAAGAGAGTTGTTTAGTATGTACA 58.143 33.333 0.00 0.00 0.00 2.90
3311 4397 9.694137 AAGTGAAGAGAGTTGTTTAGTATGTAC 57.306 33.333 0.00 0.00 0.00 2.90
3312 4398 9.692749 CAAGTGAAGAGAGTTGTTTAGTATGTA 57.307 33.333 0.00 0.00 0.00 2.29
3313 4399 8.204836 ACAAGTGAAGAGAGTTGTTTAGTATGT 58.795 33.333 0.00 0.00 36.30 2.29
3314 4400 8.594881 ACAAGTGAAGAGAGTTGTTTAGTATG 57.405 34.615 0.00 0.00 36.30 2.39
3315 4401 9.694137 GTACAAGTGAAGAGAGTTGTTTAGTAT 57.306 33.333 0.00 0.00 39.64 2.12
3316 4402 8.910944 AGTACAAGTGAAGAGAGTTGTTTAGTA 58.089 33.333 0.00 0.00 39.64 1.82
3317 4403 7.783042 AGTACAAGTGAAGAGAGTTGTTTAGT 58.217 34.615 0.00 0.00 39.64 2.24
3318 4404 7.382759 GGAGTACAAGTGAAGAGAGTTGTTTAG 59.617 40.741 0.00 0.00 39.64 1.85
3319 4405 7.208080 GGAGTACAAGTGAAGAGAGTTGTTTA 58.792 38.462 0.00 0.00 39.64 2.01
3320 4406 6.049790 GGAGTACAAGTGAAGAGAGTTGTTT 58.950 40.000 0.00 0.00 39.64 2.83
3321 4407 5.453480 GGGAGTACAAGTGAAGAGAGTTGTT 60.453 44.000 0.00 0.00 39.64 2.83
3322 4408 4.039366 GGGAGTACAAGTGAAGAGAGTTGT 59.961 45.833 0.00 0.00 41.41 3.32
3323 4409 4.282195 AGGGAGTACAAGTGAAGAGAGTTG 59.718 45.833 0.00 0.00 33.22 3.16
3324 4410 4.484912 AGGGAGTACAAGTGAAGAGAGTT 58.515 43.478 0.00 0.00 0.00 3.01
3325 4411 4.083565 GAGGGAGTACAAGTGAAGAGAGT 58.916 47.826 0.00 0.00 0.00 3.24
3326 4412 3.445805 GGAGGGAGTACAAGTGAAGAGAG 59.554 52.174 0.00 0.00 0.00 3.20
3327 4413 3.181422 TGGAGGGAGTACAAGTGAAGAGA 60.181 47.826 0.00 0.00 0.00 3.10
3328 4414 3.165875 TGGAGGGAGTACAAGTGAAGAG 58.834 50.000 0.00 0.00 0.00 2.85
3329 4415 3.254093 TGGAGGGAGTACAAGTGAAGA 57.746 47.619 0.00 0.00 0.00 2.87
3330 4416 4.508662 GAATGGAGGGAGTACAAGTGAAG 58.491 47.826 0.00 0.00 0.00 3.02
3331 4417 3.263425 GGAATGGAGGGAGTACAAGTGAA 59.737 47.826 0.00 0.00 0.00 3.18
3332 4418 2.838202 GGAATGGAGGGAGTACAAGTGA 59.162 50.000 0.00 0.00 0.00 3.41
3333 4419 2.571653 TGGAATGGAGGGAGTACAAGTG 59.428 50.000 0.00 0.00 0.00 3.16
3334 4420 2.915869 TGGAATGGAGGGAGTACAAGT 58.084 47.619 0.00 0.00 0.00 3.16
3335 4421 5.630415 TTATGGAATGGAGGGAGTACAAG 57.370 43.478 0.00 0.00 0.00 3.16
3336 4422 6.239887 GCTATTATGGAATGGAGGGAGTACAA 60.240 42.308 0.00 0.00 0.00 2.41
3337 4423 5.248477 GCTATTATGGAATGGAGGGAGTACA 59.752 44.000 0.00 0.00 0.00 2.90
3338 4424 5.248477 TGCTATTATGGAATGGAGGGAGTAC 59.752 44.000 0.00 0.00 0.00 2.73
3339 4425 5.248477 GTGCTATTATGGAATGGAGGGAGTA 59.752 44.000 0.00 0.00 0.00 2.59
3340 4426 4.042187 GTGCTATTATGGAATGGAGGGAGT 59.958 45.833 0.00 0.00 0.00 3.85
3341 4427 4.042062 TGTGCTATTATGGAATGGAGGGAG 59.958 45.833 0.00 0.00 0.00 4.30
3342 4428 3.980022 TGTGCTATTATGGAATGGAGGGA 59.020 43.478 0.00 0.00 0.00 4.20
3343 4429 4.074970 GTGTGCTATTATGGAATGGAGGG 58.925 47.826 0.00 0.00 0.00 4.30
3344 4430 4.074970 GGTGTGCTATTATGGAATGGAGG 58.925 47.826 0.00 0.00 0.00 4.30
3345 4431 4.758674 CAGGTGTGCTATTATGGAATGGAG 59.241 45.833 0.00 0.00 0.00 3.86
3346 4432 4.411869 TCAGGTGTGCTATTATGGAATGGA 59.588 41.667 0.00 0.00 0.00 3.41
3347 4433 4.516698 GTCAGGTGTGCTATTATGGAATGG 59.483 45.833 0.00 0.00 0.00 3.16
3348 4434 5.237996 CAGTCAGGTGTGCTATTATGGAATG 59.762 44.000 0.00 0.00 0.00 2.67
3349 4435 5.371526 CAGTCAGGTGTGCTATTATGGAAT 58.628 41.667 0.00 0.00 0.00 3.01
3350 4436 4.769688 CAGTCAGGTGTGCTATTATGGAA 58.230 43.478 0.00 0.00 0.00 3.53
3351 4437 3.432186 GCAGTCAGGTGTGCTATTATGGA 60.432 47.826 0.00 0.00 36.71 3.41
3352 4438 2.874701 GCAGTCAGGTGTGCTATTATGG 59.125 50.000 0.00 0.00 36.71 2.74
3353 4439 2.874701 GGCAGTCAGGTGTGCTATTATG 59.125 50.000 0.00 0.00 39.76 1.90
3354 4440 2.505407 TGGCAGTCAGGTGTGCTATTAT 59.495 45.455 0.00 0.00 39.76 1.28
3355 4441 1.905894 TGGCAGTCAGGTGTGCTATTA 59.094 47.619 0.00 0.00 39.76 0.98
3356 4442 0.692476 TGGCAGTCAGGTGTGCTATT 59.308 50.000 0.00 0.00 39.76 1.73
3357 4443 0.692476 TTGGCAGTCAGGTGTGCTAT 59.308 50.000 0.00 0.00 39.76 2.97
3358 4444 0.692476 ATTGGCAGTCAGGTGTGCTA 59.308 50.000 0.00 0.00 39.76 3.49
3369 4455 2.880443 ACCATCACAGAAATTGGCAGT 58.120 42.857 0.00 0.00 32.26 4.40
3370 4456 3.947910 AACCATCACAGAAATTGGCAG 57.052 42.857 0.00 0.00 32.26 4.85
3402 4488 4.845060 CGTTGACTCTAGTAAGTTCGTCAC 59.155 45.833 0.00 0.00 31.86 3.67
3412 4498 8.546244 CATTCGTAGTATTCGTTGACTCTAGTA 58.454 37.037 0.00 0.00 0.00 1.82
3413 4499 6.974932 TTCGTAGTATTCGTTGACTCTAGT 57.025 37.500 0.00 0.00 0.00 2.57
3423 4509 5.050644 TGTCACACATTCGTAGTATTCGT 57.949 39.130 0.00 0.00 0.00 3.85
3450 4536 9.539825 CTGCTAGACTCTACATGACAAAATAAT 57.460 33.333 0.00 0.00 0.00 1.28
3452 4538 7.976175 CACTGCTAGACTCTACATGACAAAATA 59.024 37.037 0.00 0.00 0.00 1.40
3453 4539 6.815641 CACTGCTAGACTCTACATGACAAAAT 59.184 38.462 0.00 0.00 0.00 1.82
3467 4553 1.316706 GCGAGTCCCACTGCTAGACT 61.317 60.000 0.00 0.00 43.42 3.24
3483 4569 0.384309 CCGTGAACTAGCTATGGCGA 59.616 55.000 0.00 0.00 44.37 5.54
3485 4571 0.464452 ACCCGTGAACTAGCTATGGC 59.536 55.000 0.00 0.00 39.06 4.40
3773 4862 2.922740 AGCCACTACCGAACAAGAAA 57.077 45.000 0.00 0.00 0.00 2.52
3776 4865 1.933853 GCATAGCCACTACCGAACAAG 59.066 52.381 0.00 0.00 0.00 3.16
3790 4879 4.866486 CCCAATTGAAGTTTTCAGCATAGC 59.134 41.667 7.12 0.00 41.38 2.97
3816 4905 3.122948 GCGAAACAAGATTAGCTCACGAA 59.877 43.478 0.00 0.00 0.00 3.85
3829 4919 9.825972 TTAATTTTTGAGATAGAGCGAAACAAG 57.174 29.630 0.00 0.00 0.00 3.16
3836 4926 9.956720 ATCCATTTTAATTTTTGAGATAGAGCG 57.043 29.630 0.00 0.00 0.00 5.03
3862 4953 5.839063 AGATTTCCCATCGACACTCCTATTA 59.161 40.000 0.00 0.00 0.00 0.98
3871 4962 4.837093 AAGGTAAGATTTCCCATCGACA 57.163 40.909 0.00 0.00 0.00 4.35



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.