Multiple sequence alignment - TraesCS1B01G454000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G454000 chr1B 100.000 4494 0 0 979 5472 670025352 670029845 0.000000e+00 8299.0
1 TraesCS1B01G454000 chr1B 94.297 1999 99 8 2289 4280 670172370 670170380 0.000000e+00 3046.0
2 TraesCS1B01G454000 chr1B 94.314 1794 88 7 2289 4075 670183215 670181429 0.000000e+00 2736.0
3 TraesCS1B01G454000 chr1B 93.236 961 53 2 998 1952 670184520 670183566 0.000000e+00 1404.0
4 TraesCS1B01G454000 chr1B 100.000 664 0 0 1 664 670024374 670025037 0.000000e+00 1227.0
5 TraesCS1B01G454000 chr1B 93.344 646 36 2 1314 1952 670173364 670172719 0.000000e+00 948.0
6 TraesCS1B01G454000 chr1B 92.378 328 19 1 998 1325 670178893 670178572 3.860000e-126 462.0
7 TraesCS1B01G454000 chr1B 77.399 469 79 21 2577 3023 670035549 670036012 2.530000e-63 254.0
8 TraesCS1B01G454000 chr1B 78.436 422 68 19 2620 3023 670166365 670165949 2.530000e-63 254.0
9 TraesCS1B01G454000 chr1B 96.667 60 2 0 192 251 670179020 670178961 3.490000e-17 100.0
10 TraesCS1B01G454000 chr1B 96.667 60 2 0 192 251 670184647 670184588 3.490000e-17 100.0
11 TraesCS1B01G454000 chr1B 82.609 115 15 3 5347 5460 288147993 288147883 4.510000e-16 97.1
12 TraesCS1B01G454000 chr1B 100.000 43 0 0 110 152 670024441 670024483 4.540000e-11 80.5
13 TraesCS1B01G454000 chr1B 100.000 43 0 0 68 110 670024483 670024525 4.540000e-11 80.5
14 TraesCS1B01G454000 chr1D 93.078 3684 196 21 979 4639 481476430 481472783 0.000000e+00 5336.0
15 TraesCS1B01G454000 chr1D 90.883 3170 208 30 979 4131 481563823 481566928 0.000000e+00 4178.0
16 TraesCS1B01G454000 chr1D 86.000 850 86 12 4639 5472 481472509 481471677 0.000000e+00 880.0
17 TraesCS1B01G454000 chr1D 76.991 678 112 34 1139 1792 481498415 481499072 1.130000e-91 348.0
18 TraesCS1B01G454000 chr1D 75.472 795 150 32 1031 1792 481466866 481466084 4.060000e-91 346.0
19 TraesCS1B01G454000 chr1D 74.116 707 144 30 2343 3023 481465805 481465112 7.030000e-64 255.0
20 TraesCS1B01G454000 chr1D 80.000 165 26 6 5297 5458 312965025 312965185 1.250000e-21 115.0
21 TraesCS1B01G454000 chr1A 90.915 1585 128 10 2142 3717 578022917 578024494 0.000000e+00 2115.0
22 TraesCS1B01G454000 chr1A 91.362 984 69 8 979 1952 578021919 578022896 0.000000e+00 1332.0
23 TraesCS1B01G454000 chr1A 87.597 387 43 2 3745 4131 578024495 578024876 1.400000e-120 444.0
24 TraesCS1B01G454000 chr1A 76.727 666 122 25 1139 1780 578196606 578197262 1.890000e-89 340.0
25 TraesCS1B01G454000 chr1A 88.182 110 13 0 1489 1598 578052304 578052413 1.240000e-26 132.0
26 TraesCS1B01G454000 chr3D 76.087 598 114 20 1073 1651 61696276 61696863 8.970000e-73 285.0
27 TraesCS1B01G454000 chr3D 79.464 112 18 5 4901 5011 592912495 592912388 2.110000e-09 75.0
28 TraesCS1B01G454000 chr3A 77.612 335 69 5 1073 1403 70721162 70721494 1.200000e-46 198.0
29 TraesCS1B01G454000 chr5A 83.654 208 34 0 2816 3023 546240486 546240693 4.320000e-46 196.0
30 TraesCS1B01G454000 chr6A 83.125 160 17 6 4130 4280 96982049 96981891 2.660000e-28 137.0
31 TraesCS1B01G454000 chr6A 80.682 176 32 2 5298 5472 162100604 162100430 9.560000e-28 135.0
32 TraesCS1B01G454000 chr6A 80.000 100 15 3 4913 5011 448667057 448666962 9.840000e-08 69.4
33 TraesCS1B01G454000 chr5D 80.899 178 29 4 5297 5472 385692798 385692624 9.560000e-28 135.0
34 TraesCS1B01G454000 chr5D 78.261 184 34 6 4890 5070 378146642 378146822 4.480000e-21 113.0
35 TraesCS1B01G454000 chr5D 78.205 156 27 4 5321 5472 565512536 565512384 5.840000e-15 93.5
36 TraesCS1B01G454000 chr5D 91.667 48 3 1 5108 5155 510348898 510348852 1.270000e-06 65.8
37 TraesCS1B01G454000 chr6D 82.609 161 19 6 4129 4280 80517613 80517453 3.440000e-27 134.0
38 TraesCS1B01G454000 chr6B 82.609 161 19 6 4129 4280 153681016 153680856 3.440000e-27 134.0
39 TraesCS1B01G454000 chr6B 87.611 113 14 0 4168 4280 153394923 153394811 1.240000e-26 132.0
40 TraesCS1B01G454000 chr2B 81.875 160 20 5 4130 4280 265421874 265422033 5.750000e-25 126.0
41 TraesCS1B01G454000 chr3B 80.745 161 29 2 5297 5456 14332493 14332652 2.070000e-24 124.0
42 TraesCS1B01G454000 chr2D 86.087 115 16 0 4172 4286 271511882 271511768 2.070000e-24 124.0
43 TraesCS1B01G454000 chr2D 80.952 84 14 2 4929 5010 494992557 494992640 1.270000e-06 65.8
44 TraesCS1B01G454000 chr2A 86.607 112 15 0 4169 4280 350732370 350732481 2.070000e-24 124.0
45 TraesCS1B01G454000 chr2A 80.800 125 17 6 4893 5016 755993875 755993757 2.100000e-14 91.6
46 TraesCS1B01G454000 chr2A 73.222 239 50 14 1165 1396 203465016 203464785 2.110000e-09 75.0
47 TraesCS1B01G454000 chr5B 79.394 165 28 6 5299 5460 578995037 578995198 1.610000e-20 111.0
48 TraesCS1B01G454000 chr4D 77.273 176 38 1 5297 5472 484514607 484514780 9.700000e-18 102.0
49 TraesCS1B01G454000 chr4D 86.957 69 7 2 4944 5011 371787976 371787909 5.880000e-10 76.8
50 TraesCS1B01G454000 chrUn 80.645 124 19 4 4889 5011 1932694 1932575 2.100000e-14 91.6
51 TraesCS1B01G454000 chr7A 78.571 112 19 5 4901 5011 35388880 35388987 9.840000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G454000 chr1B 670024374 670029845 5471 False 2421.75 8299 100.0000 1 5472 4 chr1B.!!$F2 5471
1 TraesCS1B01G454000 chr1B 670170380 670173364 2984 True 1997.00 3046 93.8205 1314 4280 2 chr1B.!!$R3 2966
2 TraesCS1B01G454000 chr1B 670178572 670184647 6075 True 960.40 2736 94.6524 192 4075 5 chr1B.!!$R4 3883
3 TraesCS1B01G454000 chr1D 481563823 481566928 3105 False 4178.00 4178 90.8830 979 4131 1 chr1D.!!$F3 3152
4 TraesCS1B01G454000 chr1D 481471677 481476430 4753 True 3108.00 5336 89.5390 979 5472 2 chr1D.!!$R2 4493
5 TraesCS1B01G454000 chr1D 481498415 481499072 657 False 348.00 348 76.9910 1139 1792 1 chr1D.!!$F2 653
6 TraesCS1B01G454000 chr1D 481465112 481466866 1754 True 300.50 346 74.7940 1031 3023 2 chr1D.!!$R1 1992
7 TraesCS1B01G454000 chr1A 578021919 578024876 2957 False 1297.00 2115 89.9580 979 4131 3 chr1A.!!$F3 3152
8 TraesCS1B01G454000 chr1A 578196606 578197262 656 False 340.00 340 76.7270 1139 1780 1 chr1A.!!$F2 641
9 TraesCS1B01G454000 chr3D 61696276 61696863 587 False 285.00 285 76.0870 1073 1651 1 chr3D.!!$F1 578

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
624 625 0.032403 GACATGCACTTGCTTTGCCA 59.968 50.0 2.33 0.0 42.66 4.92 F
625 626 0.032952 ACATGCACTTGCTTTGCCAG 59.967 50.0 2.33 0.0 42.66 4.85 F
1692 1723 0.039437 AGCTGTTCGTGGACAGTACG 60.039 55.0 9.91 0.0 46.81 3.67 F
2618 3058 0.460987 GCTGACGAGGAGGACAATGG 60.461 60.0 0.00 0.0 0.00 3.16 F
4081 4527 0.037697 TGGCATCGCGTCAACTTAGT 60.038 50.0 5.77 0.0 0.00 2.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1716 1747 1.134560 GTCTGGTACCGGAAGCTACAG 59.865 57.143 25.28 4.34 32.55 2.74 R
2397 2813 1.302832 GGCAGCTACAACAGGCAGT 60.303 57.895 0.00 0.00 0.00 4.40 R
3226 3670 1.338200 GCTTTGAGATCACGGTGGACT 60.338 52.381 8.50 7.89 0.00 3.85 R
4127 5022 0.110373 GCCCGTGTTAAAACTGCTCG 60.110 55.000 0.00 0.00 0.00 5.03 R
4957 6757 0.037232 CTCCTCCACGTCCAAAGTCC 60.037 60.000 0.00 0.00 0.00 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 4.078516 GGCCGTACAGGAGCCGTT 62.079 66.667 7.77 0.00 45.00 4.44
20 21 2.813908 GCCGTACAGGAGCCGTTG 60.814 66.667 7.77 0.00 45.00 4.10
21 22 2.125673 CCGTACAGGAGCCGTTGG 60.126 66.667 0.00 0.00 45.00 3.77
22 23 2.125673 CGTACAGGAGCCGTTGGG 60.126 66.667 0.00 0.00 0.00 4.12
23 24 2.642254 CGTACAGGAGCCGTTGGGA 61.642 63.158 0.00 0.00 34.06 4.37
24 25 1.218316 GTACAGGAGCCGTTGGGAG 59.782 63.158 0.00 0.00 34.06 4.30
25 26 2.656069 TACAGGAGCCGTTGGGAGC 61.656 63.158 0.00 0.00 34.06 4.70
39 40 2.202797 GAGCGCGCTCTCCATCAA 60.203 61.111 44.82 0.00 39.80 2.57
40 41 2.510238 AGCGCGCTCTCCATCAAC 60.510 61.111 31.32 0.00 0.00 3.18
41 42 2.510238 GCGCGCTCTCCATCAACT 60.510 61.111 26.67 0.00 0.00 3.16
42 43 2.520904 GCGCGCTCTCCATCAACTC 61.521 63.158 26.67 0.00 0.00 3.01
43 44 1.140589 CGCGCTCTCCATCAACTCT 59.859 57.895 5.56 0.00 0.00 3.24
44 45 0.869454 CGCGCTCTCCATCAACTCTC 60.869 60.000 5.56 0.00 0.00 3.20
45 46 0.529555 GCGCTCTCCATCAACTCTCC 60.530 60.000 0.00 0.00 0.00 3.71
46 47 1.110442 CGCTCTCCATCAACTCTCCT 58.890 55.000 0.00 0.00 0.00 3.69
47 48 2.302260 CGCTCTCCATCAACTCTCCTA 58.698 52.381 0.00 0.00 0.00 2.94
48 49 2.034053 CGCTCTCCATCAACTCTCCTAC 59.966 54.545 0.00 0.00 0.00 3.18
49 50 3.027412 GCTCTCCATCAACTCTCCTACA 58.973 50.000 0.00 0.00 0.00 2.74
50 51 3.449018 GCTCTCCATCAACTCTCCTACAA 59.551 47.826 0.00 0.00 0.00 2.41
51 52 4.679372 GCTCTCCATCAACTCTCCTACAAC 60.679 50.000 0.00 0.00 0.00 3.32
52 53 4.678256 TCTCCATCAACTCTCCTACAACT 58.322 43.478 0.00 0.00 0.00 3.16
53 54 5.827756 TCTCCATCAACTCTCCTACAACTA 58.172 41.667 0.00 0.00 0.00 2.24
54 55 5.652891 TCTCCATCAACTCTCCTACAACTAC 59.347 44.000 0.00 0.00 0.00 2.73
55 56 5.580998 TCCATCAACTCTCCTACAACTACT 58.419 41.667 0.00 0.00 0.00 2.57
56 57 5.652891 TCCATCAACTCTCCTACAACTACTC 59.347 44.000 0.00 0.00 0.00 2.59
57 58 5.449314 CCATCAACTCTCCTACAACTACTCG 60.449 48.000 0.00 0.00 0.00 4.18
58 59 3.439476 TCAACTCTCCTACAACTACTCGC 59.561 47.826 0.00 0.00 0.00 5.03
59 60 3.069079 ACTCTCCTACAACTACTCGCA 57.931 47.619 0.00 0.00 0.00 5.10
60 61 2.748532 ACTCTCCTACAACTACTCGCAC 59.251 50.000 0.00 0.00 0.00 5.34
61 62 3.011119 CTCTCCTACAACTACTCGCACT 58.989 50.000 0.00 0.00 0.00 4.40
62 63 3.008330 TCTCCTACAACTACTCGCACTC 58.992 50.000 0.00 0.00 0.00 3.51
63 64 2.089980 TCCTACAACTACTCGCACTCC 58.910 52.381 0.00 0.00 0.00 3.85
64 65 1.134560 CCTACAACTACTCGCACTCCC 59.865 57.143 0.00 0.00 0.00 4.30
65 66 0.806868 TACAACTACTCGCACTCCCG 59.193 55.000 0.00 0.00 0.00 5.14
66 67 1.177256 ACAACTACTCGCACTCCCGT 61.177 55.000 0.00 0.00 0.00 5.28
67 68 0.806868 CAACTACTCGCACTCCCGTA 59.193 55.000 0.00 0.00 0.00 4.02
68 69 0.807496 AACTACTCGCACTCCCGTAC 59.193 55.000 0.00 0.00 0.00 3.67
69 70 0.321919 ACTACTCGCACTCCCGTACA 60.322 55.000 0.00 0.00 0.00 2.90
70 71 1.022735 CTACTCGCACTCCCGTACAT 58.977 55.000 0.00 0.00 0.00 2.29
71 72 1.002684 CTACTCGCACTCCCGTACATC 60.003 57.143 0.00 0.00 0.00 3.06
72 73 1.065928 CTCGCACTCCCGTACATCC 59.934 63.158 0.00 0.00 0.00 3.51
73 74 2.278596 CGCACTCCCGTACATCCG 60.279 66.667 0.00 0.00 0.00 4.18
74 75 2.890371 GCACTCCCGTACATCCGT 59.110 61.111 0.00 0.00 0.00 4.69
75 76 1.518572 GCACTCCCGTACATCCGTG 60.519 63.158 0.00 0.00 0.00 4.94
76 77 1.888018 CACTCCCGTACATCCGTGT 59.112 57.895 0.00 0.00 42.39 4.49
77 78 0.179145 CACTCCCGTACATCCGTGTC 60.179 60.000 0.00 0.00 39.77 3.67
78 79 0.323178 ACTCCCGTACATCCGTGTCT 60.323 55.000 0.00 0.00 39.77 3.41
79 80 1.065199 ACTCCCGTACATCCGTGTCTA 60.065 52.381 0.00 0.00 39.77 2.59
80 81 1.602851 CTCCCGTACATCCGTGTCTAG 59.397 57.143 0.00 0.00 39.77 2.43
81 82 1.210234 TCCCGTACATCCGTGTCTAGA 59.790 52.381 0.00 0.00 39.77 2.43
82 83 2.158711 TCCCGTACATCCGTGTCTAGAT 60.159 50.000 0.00 0.00 39.77 1.98
83 84 3.071457 TCCCGTACATCCGTGTCTAGATA 59.929 47.826 0.00 0.00 39.77 1.98
84 85 3.817084 CCCGTACATCCGTGTCTAGATAA 59.183 47.826 0.00 0.00 39.77 1.75
85 86 4.276678 CCCGTACATCCGTGTCTAGATAAA 59.723 45.833 0.00 0.00 39.77 1.40
86 87 5.048224 CCCGTACATCCGTGTCTAGATAAAT 60.048 44.000 0.00 0.00 39.77 1.40
87 88 6.149973 CCCGTACATCCGTGTCTAGATAAATA 59.850 42.308 0.00 0.00 39.77 1.40
88 89 7.148120 CCCGTACATCCGTGTCTAGATAAATAT 60.148 40.741 0.00 0.00 39.77 1.28
89 90 8.886719 CCGTACATCCGTGTCTAGATAAATATA 58.113 37.037 0.00 0.00 39.77 0.86
93 94 8.251721 ACATCCGTGTCTAGATAAATATAAGGC 58.748 37.037 0.00 0.00 31.41 4.35
94 95 7.770366 TCCGTGTCTAGATAAATATAAGGCA 57.230 36.000 0.00 0.00 0.00 4.75
95 96 8.185506 TCCGTGTCTAGATAAATATAAGGCAA 57.814 34.615 0.00 0.00 0.00 4.52
96 97 8.304596 TCCGTGTCTAGATAAATATAAGGCAAG 58.695 37.037 0.00 0.00 0.00 4.01
97 98 8.304596 CCGTGTCTAGATAAATATAAGGCAAGA 58.695 37.037 0.00 0.00 0.00 3.02
98 99 9.692749 CGTGTCTAGATAAATATAAGGCAAGAA 57.307 33.333 0.00 0.00 0.00 2.52
108 109 2.989422 AAGGCAAGAATTTTCGGACG 57.011 45.000 0.00 0.00 0.00 4.79
109 110 2.178912 AGGCAAGAATTTTCGGACGA 57.821 45.000 0.00 0.00 0.00 4.20
110 111 1.804748 AGGCAAGAATTTTCGGACGAC 59.195 47.619 0.00 0.00 0.00 4.34
111 112 1.533731 GGCAAGAATTTTCGGACGACA 59.466 47.619 0.00 0.00 0.00 4.35
112 113 2.161609 GGCAAGAATTTTCGGACGACAT 59.838 45.455 0.00 0.00 0.00 3.06
113 114 3.417185 GCAAGAATTTTCGGACGACATC 58.583 45.455 0.00 0.00 0.00 3.06
114 115 3.727970 GCAAGAATTTTCGGACGACATCC 60.728 47.826 0.00 0.00 45.20 3.51
135 136 8.251721 ACATCCGTGTCTAGATAAATATAAGGC 58.748 37.037 0.00 0.00 31.41 4.35
136 137 7.770366 TCCGTGTCTAGATAAATATAAGGCA 57.230 36.000 0.00 0.00 0.00 4.75
137 138 8.185506 TCCGTGTCTAGATAAATATAAGGCAA 57.814 34.615 0.00 0.00 0.00 4.52
138 139 8.304596 TCCGTGTCTAGATAAATATAAGGCAAG 58.695 37.037 0.00 0.00 0.00 4.01
139 140 8.304596 CCGTGTCTAGATAAATATAAGGCAAGA 58.695 37.037 0.00 0.00 0.00 3.02
140 141 9.692749 CGTGTCTAGATAAATATAAGGCAAGAA 57.307 33.333 0.00 0.00 0.00 2.52
150 151 2.989422 AAGGCAAGAATTTTCGGACG 57.011 45.000 0.00 0.00 0.00 4.79
151 152 2.178912 AGGCAAGAATTTTCGGACGA 57.821 45.000 0.00 0.00 0.00 4.20
152 153 2.500229 AGGCAAGAATTTTCGGACGAA 58.500 42.857 2.62 2.62 0.00 3.85
153 154 2.484264 AGGCAAGAATTTTCGGACGAAG 59.516 45.455 7.25 0.00 35.38 3.79
154 155 2.414161 GGCAAGAATTTTCGGACGAAGG 60.414 50.000 7.25 0.00 35.38 3.46
155 156 2.414161 GCAAGAATTTTCGGACGAAGGG 60.414 50.000 7.25 0.00 35.38 3.95
156 157 3.071479 CAAGAATTTTCGGACGAAGGGA 58.929 45.455 7.25 0.00 35.38 4.20
157 158 2.973945 AGAATTTTCGGACGAAGGGAG 58.026 47.619 7.25 0.00 35.38 4.30
158 159 2.302157 AGAATTTTCGGACGAAGGGAGT 59.698 45.455 7.25 0.00 35.38 3.85
159 160 3.512724 AGAATTTTCGGACGAAGGGAGTA 59.487 43.478 7.25 0.00 35.38 2.59
160 161 2.730550 TTTTCGGACGAAGGGAGTAC 57.269 50.000 7.25 0.00 35.38 2.73
161 162 1.915141 TTTCGGACGAAGGGAGTACT 58.085 50.000 7.25 0.00 35.38 2.73
162 163 1.915141 TTCGGACGAAGGGAGTACTT 58.085 50.000 2.62 0.00 0.00 2.24
163 164 1.457346 TCGGACGAAGGGAGTACTTC 58.543 55.000 0.00 0.00 42.63 3.01
164 165 1.004044 TCGGACGAAGGGAGTACTTCT 59.996 52.381 0.01 0.00 43.61 2.85
165 166 1.401199 CGGACGAAGGGAGTACTTCTC 59.599 57.143 0.01 0.00 43.61 2.87
166 167 2.444421 GGACGAAGGGAGTACTTCTCA 58.556 52.381 0.01 0.00 43.61 3.27
167 168 2.824341 GGACGAAGGGAGTACTTCTCAA 59.176 50.000 0.01 0.00 43.61 3.02
168 169 3.447944 GGACGAAGGGAGTACTTCTCAAT 59.552 47.826 0.01 0.00 43.61 2.57
169 170 4.440387 GGACGAAGGGAGTACTTCTCAATC 60.440 50.000 0.01 0.13 43.61 2.67
170 171 4.087182 ACGAAGGGAGTACTTCTCAATCA 58.913 43.478 0.01 0.00 43.61 2.57
171 172 4.082136 ACGAAGGGAGTACTTCTCAATCAC 60.082 45.833 0.01 0.00 43.61 3.06
172 173 4.425520 GAAGGGAGTACTTCTCAATCACG 58.574 47.826 0.01 0.00 44.40 4.35
173 174 2.761208 AGGGAGTACTTCTCAATCACGG 59.239 50.000 0.01 0.00 44.40 4.94
174 175 2.159085 GGGAGTACTTCTCAATCACGGG 60.159 54.545 0.01 0.00 44.40 5.28
175 176 2.159085 GGAGTACTTCTCAATCACGGGG 60.159 54.545 0.00 0.00 44.40 5.73
176 177 1.831736 AGTACTTCTCAATCACGGGGG 59.168 52.381 0.00 0.00 0.00 5.40
177 178 1.829222 GTACTTCTCAATCACGGGGGA 59.171 52.381 0.00 0.00 0.00 4.81
178 179 1.584724 ACTTCTCAATCACGGGGGAT 58.415 50.000 0.00 0.00 0.00 3.85
179 180 1.916181 ACTTCTCAATCACGGGGGATT 59.084 47.619 0.00 0.00 37.99 3.01
182 183 4.258206 CAATCACGGGGGATTGGG 57.742 61.111 14.45 0.00 46.58 4.12
183 184 1.612513 CAATCACGGGGGATTGGGA 59.387 57.895 14.45 0.00 46.58 4.37
184 185 0.751643 CAATCACGGGGGATTGGGAC 60.752 60.000 14.45 0.00 46.58 4.46
185 186 2.265467 AATCACGGGGGATTGGGACG 62.265 60.000 0.00 0.00 36.20 4.79
186 187 3.712907 CACGGGGGATTGGGACGT 61.713 66.667 0.00 0.00 38.43 4.34
187 188 3.712907 ACGGGGGATTGGGACGTG 61.713 66.667 0.00 0.00 36.32 4.49
188 189 3.395702 CGGGGGATTGGGACGTGA 61.396 66.667 0.00 0.00 0.00 4.35
189 190 2.961893 CGGGGGATTGGGACGTGAA 61.962 63.158 0.00 0.00 0.00 3.18
190 191 1.613061 GGGGGATTGGGACGTGAAT 59.387 57.895 0.00 0.00 0.00 2.57
221 222 1.704641 AAAAGGGACAAGGACTTGCC 58.295 50.000 11.73 12.81 44.03 4.52
237 238 2.975536 CCTTGCCAGTTGCCATGG 59.024 61.111 7.63 7.63 40.16 3.66
238 239 1.909781 CCTTGCCAGTTGCCATGGT 60.910 57.895 14.67 0.00 40.17 3.55
239 240 1.588082 CTTGCCAGTTGCCATGGTC 59.412 57.895 14.67 6.41 40.17 4.02
240 241 2.203972 CTTGCCAGTTGCCATGGTCG 62.204 60.000 14.67 0.00 40.17 4.79
241 242 2.672996 GCCAGTTGCCATGGTCGT 60.673 61.111 14.67 0.00 40.17 4.34
242 243 2.690778 GCCAGTTGCCATGGTCGTC 61.691 63.158 14.67 2.04 40.17 4.20
243 244 2.390599 CCAGTTGCCATGGTCGTCG 61.391 63.158 14.67 0.00 32.85 5.12
244 245 1.374125 CAGTTGCCATGGTCGTCGA 60.374 57.895 14.67 0.00 0.00 4.20
245 246 1.374252 AGTTGCCATGGTCGTCGAC 60.374 57.895 17.16 17.16 0.00 4.20
246 247 1.666553 GTTGCCATGGTCGTCGACA 60.667 57.895 25.64 12.90 33.68 4.35
247 248 1.069935 TTGCCATGGTCGTCGACAA 59.930 52.632 25.64 16.54 33.68 3.18
248 249 0.948623 TTGCCATGGTCGTCGACAAG 60.949 55.000 25.64 14.34 33.68 3.16
249 250 2.100631 GCCATGGTCGTCGACAAGG 61.101 63.158 25.64 22.20 33.68 3.61
250 251 1.589630 CCATGGTCGTCGACAAGGA 59.410 57.895 25.64 7.77 33.68 3.36
251 252 0.037697 CCATGGTCGTCGACAAGGAA 60.038 55.000 25.64 7.01 33.68 3.36
252 253 1.405526 CCATGGTCGTCGACAAGGAAT 60.406 52.381 25.64 8.87 33.68 3.01
253 254 1.660607 CATGGTCGTCGACAAGGAATG 59.339 52.381 25.64 15.79 33.68 2.67
254 255 0.037697 TGGTCGTCGACAAGGAATGG 60.038 55.000 25.64 0.00 33.68 3.16
255 256 0.739813 GGTCGTCGACAAGGAATGGG 60.740 60.000 25.64 0.00 33.68 4.00
256 257 0.739813 GTCGTCGACAAGGAATGGGG 60.740 60.000 20.28 0.00 32.09 4.96
257 258 1.449601 CGTCGACAAGGAATGGGGG 60.450 63.158 17.16 0.00 0.00 5.40
258 259 1.895020 CGTCGACAAGGAATGGGGGA 61.895 60.000 17.16 0.00 0.00 4.81
259 260 0.107654 GTCGACAAGGAATGGGGGAG 60.108 60.000 11.55 0.00 0.00 4.30
260 261 0.252513 TCGACAAGGAATGGGGGAGA 60.253 55.000 0.00 0.00 0.00 3.71
261 262 0.107654 CGACAAGGAATGGGGGAGAC 60.108 60.000 0.00 0.00 0.00 3.36
262 263 0.991920 GACAAGGAATGGGGGAGACA 59.008 55.000 0.00 0.00 0.00 3.41
263 264 0.698818 ACAAGGAATGGGGGAGACAC 59.301 55.000 0.00 0.00 0.00 3.67
264 265 0.995024 CAAGGAATGGGGGAGACACT 59.005 55.000 0.00 0.00 0.00 3.55
265 266 1.355720 CAAGGAATGGGGGAGACACTT 59.644 52.381 0.00 0.00 0.00 3.16
266 267 1.760405 AGGAATGGGGGAGACACTTT 58.240 50.000 0.00 0.00 0.00 2.66
267 268 1.355720 AGGAATGGGGGAGACACTTTG 59.644 52.381 0.00 0.00 0.00 2.77
268 269 1.354368 GGAATGGGGGAGACACTTTGA 59.646 52.381 0.00 0.00 0.00 2.69
269 270 2.024941 GGAATGGGGGAGACACTTTGAT 60.025 50.000 0.00 0.00 0.00 2.57
270 271 2.814805 ATGGGGGAGACACTTTGATG 57.185 50.000 0.00 0.00 0.00 3.07
271 272 1.444933 TGGGGGAGACACTTTGATGT 58.555 50.000 0.00 0.00 34.78 3.06
272 273 1.073763 TGGGGGAGACACTTTGATGTG 59.926 52.381 0.00 0.00 43.07 3.21
279 280 2.325583 ACACTTTGATGTGTCCGTGT 57.674 45.000 0.00 0.00 46.90 4.49
280 281 1.939934 ACACTTTGATGTGTCCGTGTG 59.060 47.619 0.00 0.00 46.90 3.82
281 282 0.944386 ACTTTGATGTGTCCGTGTGC 59.056 50.000 0.00 0.00 0.00 4.57
282 283 0.238289 CTTTGATGTGTCCGTGTGCC 59.762 55.000 0.00 0.00 0.00 5.01
283 284 0.464554 TTTGATGTGTCCGTGTGCCA 60.465 50.000 0.00 0.00 0.00 4.92
284 285 0.464554 TTGATGTGTCCGTGTGCCAA 60.465 50.000 0.00 0.00 0.00 4.52
285 286 1.163420 TGATGTGTCCGTGTGCCAAC 61.163 55.000 0.00 0.00 0.00 3.77
286 287 1.852067 GATGTGTCCGTGTGCCAACC 61.852 60.000 0.00 0.00 0.00 3.77
287 288 3.284449 GTGTCCGTGTGCCAACCC 61.284 66.667 0.00 0.00 0.00 4.11
288 289 4.572571 TGTCCGTGTGCCAACCCC 62.573 66.667 0.00 0.00 0.00 4.95
304 305 3.174987 CCCCCATACCCGGCATCA 61.175 66.667 0.00 0.00 0.00 3.07
305 306 2.113139 CCCCATACCCGGCATCAC 59.887 66.667 0.00 0.00 0.00 3.06
306 307 2.452064 CCCCATACCCGGCATCACT 61.452 63.158 0.00 0.00 0.00 3.41
307 308 1.071471 CCCATACCCGGCATCACTC 59.929 63.158 0.00 0.00 0.00 3.51
308 309 1.071471 CCATACCCGGCATCACTCC 59.929 63.158 0.00 0.00 0.00 3.85
309 310 1.695114 CCATACCCGGCATCACTCCA 61.695 60.000 0.00 0.00 0.00 3.86
310 311 0.532862 CATACCCGGCATCACTCCAC 60.533 60.000 0.00 0.00 0.00 4.02
311 312 2.028125 ATACCCGGCATCACTCCACG 62.028 60.000 0.00 0.00 0.00 4.94
315 316 4.451150 GGCATCACTCCACGCGGA 62.451 66.667 12.47 0.00 39.79 5.54
330 331 3.792736 GGAGCCCCGCCACATGTA 61.793 66.667 0.00 0.00 0.00 2.29
331 332 2.510906 GAGCCCCGCCACATGTAT 59.489 61.111 0.00 0.00 0.00 2.29
332 333 1.752198 GAGCCCCGCCACATGTATA 59.248 57.895 0.00 0.00 0.00 1.47
333 334 0.324943 GAGCCCCGCCACATGTATAT 59.675 55.000 0.00 0.00 0.00 0.86
334 335 0.771127 AGCCCCGCCACATGTATATT 59.229 50.000 0.00 0.00 0.00 1.28
335 336 1.144913 AGCCCCGCCACATGTATATTT 59.855 47.619 0.00 0.00 0.00 1.40
336 337 1.960689 GCCCCGCCACATGTATATTTT 59.039 47.619 0.00 0.00 0.00 1.82
337 338 3.150767 GCCCCGCCACATGTATATTTTA 58.849 45.455 0.00 0.00 0.00 1.52
338 339 3.570550 GCCCCGCCACATGTATATTTTAA 59.429 43.478 0.00 0.00 0.00 1.52
339 340 4.557895 GCCCCGCCACATGTATATTTTAAC 60.558 45.833 0.00 0.00 0.00 2.01
340 341 4.825085 CCCCGCCACATGTATATTTTAACT 59.175 41.667 0.00 0.00 0.00 2.24
341 342 5.300792 CCCCGCCACATGTATATTTTAACTT 59.699 40.000 0.00 0.00 0.00 2.66
342 343 6.183360 CCCCGCCACATGTATATTTTAACTTT 60.183 38.462 0.00 0.00 0.00 2.66
343 344 6.695278 CCCGCCACATGTATATTTTAACTTTG 59.305 38.462 0.00 0.00 0.00 2.77
344 345 6.198216 CCGCCACATGTATATTTTAACTTTGC 59.802 38.462 0.00 0.00 0.00 3.68
345 346 6.972328 CGCCACATGTATATTTTAACTTTGCT 59.028 34.615 0.00 0.00 0.00 3.91
346 347 8.126074 CGCCACATGTATATTTTAACTTTGCTA 58.874 33.333 0.00 0.00 0.00 3.49
347 348 9.450807 GCCACATGTATATTTTAACTTTGCTAG 57.549 33.333 0.00 0.00 0.00 3.42
348 349 9.950680 CCACATGTATATTTTAACTTTGCTAGG 57.049 33.333 0.00 0.00 0.00 3.02
351 352 9.884465 CATGTATATTTTAACTTTGCTAGGAGC 57.116 33.333 0.00 0.00 42.82 4.70
365 366 3.755378 GCTAGGAGCATTACATTCCATGG 59.245 47.826 4.97 4.97 41.89 3.66
366 367 2.590821 AGGAGCATTACATTCCATGGC 58.409 47.619 6.96 0.00 33.32 4.40
367 368 2.176364 AGGAGCATTACATTCCATGGCT 59.824 45.455 6.96 0.00 33.32 4.75
368 369 2.961062 GGAGCATTACATTCCATGGCTT 59.039 45.455 6.96 0.00 33.60 4.35
369 370 3.385755 GGAGCATTACATTCCATGGCTTT 59.614 43.478 6.96 0.00 33.60 3.51
370 371 4.365723 GAGCATTACATTCCATGGCTTTG 58.634 43.478 6.96 6.86 33.60 2.77
371 372 2.867975 GCATTACATTCCATGGCTTTGC 59.132 45.455 6.96 5.45 33.60 3.68
397 398 2.819595 CCGCCTGATCGGTTGGTG 60.820 66.667 0.00 1.06 44.18 4.17
398 399 3.499737 CGCCTGATCGGTTGGTGC 61.500 66.667 0.00 0.00 34.25 5.01
399 400 2.045926 GCCTGATCGGTTGGTGCT 60.046 61.111 0.00 0.00 34.25 4.40
400 401 2.109126 GCCTGATCGGTTGGTGCTC 61.109 63.158 0.00 0.00 34.25 4.26
401 402 1.599047 CCTGATCGGTTGGTGCTCT 59.401 57.895 0.00 0.00 0.00 4.09
402 403 0.742281 CCTGATCGGTTGGTGCTCTG 60.742 60.000 0.00 0.00 0.00 3.35
403 404 0.742281 CTGATCGGTTGGTGCTCTGG 60.742 60.000 0.00 0.00 0.00 3.86
404 405 1.191489 TGATCGGTTGGTGCTCTGGA 61.191 55.000 0.00 0.00 0.00 3.86
405 406 0.036388 GATCGGTTGGTGCTCTGGAA 60.036 55.000 0.00 0.00 0.00 3.53
406 407 0.321653 ATCGGTTGGTGCTCTGGAAC 60.322 55.000 0.00 0.00 0.00 3.62
407 408 1.966451 CGGTTGGTGCTCTGGAACC 60.966 63.158 0.00 0.00 41.62 3.62
408 409 1.603739 GGTTGGTGCTCTGGAACCC 60.604 63.158 0.00 0.00 40.52 4.11
409 410 1.150536 GTTGGTGCTCTGGAACCCA 59.849 57.895 0.00 0.00 40.52 4.51
410 411 0.467290 GTTGGTGCTCTGGAACCCAA 60.467 55.000 0.00 0.00 40.52 4.12
411 412 0.178992 TTGGTGCTCTGGAACCCAAG 60.179 55.000 0.00 0.00 40.52 3.61
412 413 1.973812 GGTGCTCTGGAACCCAAGC 60.974 63.158 10.88 10.88 35.05 4.01
413 414 1.073897 GTGCTCTGGAACCCAAGCT 59.926 57.895 15.64 0.00 37.98 3.74
414 415 1.073722 TGCTCTGGAACCCAAGCTG 59.926 57.895 15.64 0.00 37.98 4.24
415 416 1.376466 GCTCTGGAACCCAAGCTGA 59.624 57.895 0.00 0.00 35.96 4.26
416 417 0.250901 GCTCTGGAACCCAAGCTGAA 60.251 55.000 0.00 0.00 35.96 3.02
417 418 1.528129 CTCTGGAACCCAAGCTGAAC 58.472 55.000 0.00 0.00 30.80 3.18
418 419 0.843309 TCTGGAACCCAAGCTGAACA 59.157 50.000 0.00 0.00 30.80 3.18
419 420 1.425066 TCTGGAACCCAAGCTGAACAT 59.575 47.619 0.00 0.00 30.80 2.71
420 421 1.542915 CTGGAACCCAAGCTGAACATG 59.457 52.381 0.00 0.00 30.80 3.21
421 422 0.244721 GGAACCCAAGCTGAACATGC 59.755 55.000 0.00 0.00 0.00 4.06
422 423 0.961019 GAACCCAAGCTGAACATGCA 59.039 50.000 0.00 0.00 0.00 3.96
423 424 0.675633 AACCCAAGCTGAACATGCAC 59.324 50.000 0.00 0.00 0.00 4.57
424 425 0.467844 ACCCAAGCTGAACATGCACA 60.468 50.000 0.00 0.00 0.00 4.57
425 426 0.892755 CCCAAGCTGAACATGCACAT 59.107 50.000 0.00 0.00 0.00 3.21
426 427 1.135199 CCCAAGCTGAACATGCACATC 60.135 52.381 0.00 0.00 0.00 3.06
427 428 1.135199 CCAAGCTGAACATGCACATCC 60.135 52.381 0.00 0.00 0.00 3.51
428 429 1.542472 CAAGCTGAACATGCACATCCA 59.458 47.619 0.00 0.00 0.00 3.41
429 430 1.913778 AGCTGAACATGCACATCCAA 58.086 45.000 0.00 0.00 0.00 3.53
430 431 2.241160 AGCTGAACATGCACATCCAAA 58.759 42.857 0.00 0.00 0.00 3.28
431 432 2.029649 AGCTGAACATGCACATCCAAAC 60.030 45.455 0.00 0.00 0.00 2.93
432 433 2.927871 GCTGAACATGCACATCCAAACC 60.928 50.000 0.00 0.00 0.00 3.27
433 434 1.269174 TGAACATGCACATCCAAACCG 59.731 47.619 0.00 0.00 0.00 4.44
434 435 0.602562 AACATGCACATCCAAACCGG 59.397 50.000 0.00 0.00 0.00 5.28
435 436 0.539438 ACATGCACATCCAAACCGGT 60.539 50.000 0.00 0.00 35.57 5.28
436 437 1.271652 ACATGCACATCCAAACCGGTA 60.272 47.619 8.00 0.00 35.57 4.02
437 438 1.815613 CATGCACATCCAAACCGGTAA 59.184 47.619 8.00 0.00 35.57 2.85
438 439 1.982660 TGCACATCCAAACCGGTAAA 58.017 45.000 8.00 0.00 35.57 2.01
439 440 2.307768 TGCACATCCAAACCGGTAAAA 58.692 42.857 8.00 0.00 35.57 1.52
440 441 2.034812 TGCACATCCAAACCGGTAAAAC 59.965 45.455 8.00 0.00 35.57 2.43
441 442 2.608506 GCACATCCAAACCGGTAAAACC 60.609 50.000 8.00 0.00 35.57 3.27
442 443 2.029739 CACATCCAAACCGGTAAAACCC 60.030 50.000 8.00 0.00 33.75 4.11
443 444 1.546923 CATCCAAACCGGTAAAACCCC 59.453 52.381 8.00 0.00 33.75 4.95
444 445 0.852155 TCCAAACCGGTAAAACCCCT 59.148 50.000 8.00 0.00 33.75 4.79
445 446 1.217436 TCCAAACCGGTAAAACCCCTT 59.783 47.619 8.00 0.00 33.75 3.95
446 447 1.614903 CCAAACCGGTAAAACCCCTTC 59.385 52.381 8.00 0.00 33.75 3.46
447 448 2.308690 CAAACCGGTAAAACCCCTTCA 58.691 47.619 8.00 0.00 33.75 3.02
448 449 2.694109 CAAACCGGTAAAACCCCTTCAA 59.306 45.455 8.00 0.00 33.75 2.69
449 450 2.984435 ACCGGTAAAACCCCTTCAAT 57.016 45.000 4.49 0.00 33.75 2.57
450 451 3.247948 ACCGGTAAAACCCCTTCAATT 57.752 42.857 4.49 0.00 33.75 2.32
451 452 3.159472 ACCGGTAAAACCCCTTCAATTC 58.841 45.455 4.49 0.00 33.75 2.17
452 453 3.158676 CCGGTAAAACCCCTTCAATTCA 58.841 45.455 0.00 0.00 33.75 2.57
453 454 3.574826 CCGGTAAAACCCCTTCAATTCAA 59.425 43.478 0.00 0.00 33.75 2.69
454 455 4.552355 CGGTAAAACCCCTTCAATTCAAC 58.448 43.478 0.00 0.00 33.75 3.18
455 456 4.552355 GGTAAAACCCCTTCAATTCAACG 58.448 43.478 0.00 0.00 30.04 4.10
456 457 3.744238 AAAACCCCTTCAATTCAACGG 57.256 42.857 0.00 0.00 0.00 4.44
457 458 2.668144 AACCCCTTCAATTCAACGGA 57.332 45.000 0.00 0.00 0.00 4.69
458 459 2.668144 ACCCCTTCAATTCAACGGAA 57.332 45.000 0.00 0.00 37.45 4.30
459 460 2.235891 ACCCCTTCAATTCAACGGAAC 58.764 47.619 0.00 0.00 35.46 3.62
460 461 1.544246 CCCCTTCAATTCAACGGAACC 59.456 52.381 0.00 0.00 35.46 3.62
461 462 1.544246 CCCTTCAATTCAACGGAACCC 59.456 52.381 0.00 0.00 35.46 4.11
462 463 2.235016 CCTTCAATTCAACGGAACCCA 58.765 47.619 0.00 0.00 35.46 4.51
463 464 2.625790 CCTTCAATTCAACGGAACCCAA 59.374 45.455 0.00 0.00 35.46 4.12
464 465 3.068873 CCTTCAATTCAACGGAACCCAAA 59.931 43.478 0.00 0.00 35.46 3.28
465 466 3.719173 TCAATTCAACGGAACCCAAAC 57.281 42.857 0.00 0.00 35.46 2.93
466 467 3.292460 TCAATTCAACGGAACCCAAACT 58.708 40.909 0.00 0.00 35.46 2.66
467 468 3.067461 TCAATTCAACGGAACCCAAACTG 59.933 43.478 0.00 0.00 35.46 3.16
468 469 2.421751 TTCAACGGAACCCAAACTGA 57.578 45.000 0.00 0.00 0.00 3.41
469 470 2.421751 TCAACGGAACCCAAACTGAA 57.578 45.000 0.00 0.00 0.00 3.02
470 471 2.018515 TCAACGGAACCCAAACTGAAC 58.981 47.619 0.00 0.00 0.00 3.18
471 472 1.746220 CAACGGAACCCAAACTGAACA 59.254 47.619 0.00 0.00 0.00 3.18
472 473 2.358322 ACGGAACCCAAACTGAACAT 57.642 45.000 0.00 0.00 0.00 2.71
473 474 1.953686 ACGGAACCCAAACTGAACATG 59.046 47.619 0.00 0.00 0.00 3.21
474 475 1.335872 CGGAACCCAAACTGAACATGC 60.336 52.381 0.00 0.00 0.00 4.06
475 476 1.000843 GGAACCCAAACTGAACATGCC 59.999 52.381 0.00 0.00 0.00 4.40
476 477 0.673437 AACCCAAACTGAACATGCCG 59.327 50.000 0.00 0.00 0.00 5.69
477 478 0.179004 ACCCAAACTGAACATGCCGA 60.179 50.000 0.00 0.00 0.00 5.54
478 479 0.240945 CCCAAACTGAACATGCCGAC 59.759 55.000 0.00 0.00 0.00 4.79
479 480 0.110238 CCAAACTGAACATGCCGACG 60.110 55.000 0.00 0.00 0.00 5.12
480 481 0.586319 CAAACTGAACATGCCGACGT 59.414 50.000 0.00 0.00 0.00 4.34
481 482 1.795872 CAAACTGAACATGCCGACGTA 59.204 47.619 0.00 0.00 0.00 3.57
482 483 2.380084 AACTGAACATGCCGACGTAT 57.620 45.000 0.00 0.00 0.00 3.06
483 484 1.640428 ACTGAACATGCCGACGTATG 58.360 50.000 7.53 7.53 38.02 2.39
484 485 0.930310 CTGAACATGCCGACGTATGG 59.070 55.000 12.20 1.95 36.48 2.74
485 486 0.248012 TGAACATGCCGACGTATGGT 59.752 50.000 8.02 6.88 36.48 3.55
486 487 1.338294 TGAACATGCCGACGTATGGTT 60.338 47.619 8.02 3.80 36.48 3.67
487 488 1.735571 GAACATGCCGACGTATGGTTT 59.264 47.619 8.02 1.37 36.48 3.27
488 489 1.083489 ACATGCCGACGTATGGTTTG 58.917 50.000 8.02 8.14 36.48 2.93
489 490 1.083489 CATGCCGACGTATGGTTTGT 58.917 50.000 8.02 0.00 0.00 2.83
490 491 1.083489 ATGCCGACGTATGGTTTGTG 58.917 50.000 8.02 0.00 0.00 3.33
491 492 0.033642 TGCCGACGTATGGTTTGTGA 59.966 50.000 8.02 0.00 0.00 3.58
492 493 0.441145 GCCGACGTATGGTTTGTGAC 59.559 55.000 8.02 0.00 0.00 3.67
493 494 1.938016 GCCGACGTATGGTTTGTGACT 60.938 52.381 8.02 0.00 0.00 3.41
494 495 2.671914 GCCGACGTATGGTTTGTGACTA 60.672 50.000 8.02 0.00 0.00 2.59
495 496 3.777478 CCGACGTATGGTTTGTGACTAT 58.223 45.455 0.00 0.00 33.59 2.12
496 497 4.734402 GCCGACGTATGGTTTGTGACTATA 60.734 45.833 8.02 0.00 31.27 1.31
497 498 5.526115 CCGACGTATGGTTTGTGACTATAT 58.474 41.667 0.00 0.00 34.69 0.86
498 499 5.981315 CCGACGTATGGTTTGTGACTATATT 59.019 40.000 0.00 0.00 34.69 1.28
499 500 6.143438 CCGACGTATGGTTTGTGACTATATTC 59.857 42.308 0.00 0.00 34.69 1.75
500 501 6.693978 CGACGTATGGTTTGTGACTATATTCA 59.306 38.462 0.00 0.00 34.69 2.57
501 502 7.221259 CGACGTATGGTTTGTGACTATATTCAA 59.779 37.037 0.00 0.00 34.69 2.69
502 503 8.958119 ACGTATGGTTTGTGACTATATTCAAT 57.042 30.769 0.00 0.00 34.69 2.57
503 504 8.826710 ACGTATGGTTTGTGACTATATTCAATG 58.173 33.333 0.00 0.00 34.69 2.82
504 505 8.282592 CGTATGGTTTGTGACTATATTCAATGG 58.717 37.037 0.00 0.00 34.69 3.16
505 506 6.449635 TGGTTTGTGACTATATTCAATGGC 57.550 37.500 0.00 0.00 0.00 4.40
506 507 5.948758 TGGTTTGTGACTATATTCAATGGCA 59.051 36.000 0.00 0.00 0.00 4.92
507 508 6.606796 TGGTTTGTGACTATATTCAATGGCAT 59.393 34.615 0.00 0.00 0.00 4.40
508 509 6.919662 GGTTTGTGACTATATTCAATGGCATG 59.080 38.462 0.00 0.00 0.00 4.06
509 510 6.638096 TTGTGACTATATTCAATGGCATGG 57.362 37.500 0.00 0.00 0.00 3.66
510 511 5.939447 TGTGACTATATTCAATGGCATGGA 58.061 37.500 0.00 0.00 0.00 3.41
511 512 5.999600 TGTGACTATATTCAATGGCATGGAG 59.000 40.000 4.45 0.00 0.00 3.86
512 513 6.183361 TGTGACTATATTCAATGGCATGGAGA 60.183 38.462 4.45 0.00 0.00 3.71
513 514 6.712095 GTGACTATATTCAATGGCATGGAGAA 59.288 38.462 4.45 8.47 0.00 2.87
514 515 6.938596 TGACTATATTCAATGGCATGGAGAAG 59.061 38.462 4.45 4.37 0.00 2.85
515 516 6.243900 ACTATATTCAATGGCATGGAGAAGG 58.756 40.000 4.45 0.00 0.00 3.46
516 517 2.905415 TTCAATGGCATGGAGAAGGT 57.095 45.000 4.45 0.00 0.00 3.50
517 518 2.905415 TCAATGGCATGGAGAAGGTT 57.095 45.000 0.00 0.00 0.00 3.50
518 519 2.726821 TCAATGGCATGGAGAAGGTTC 58.273 47.619 0.00 0.00 0.00 3.62
519 520 1.402968 CAATGGCATGGAGAAGGTTCG 59.597 52.381 0.00 0.00 0.00 3.95
520 521 0.749454 ATGGCATGGAGAAGGTTCGC 60.749 55.000 0.00 0.00 0.00 4.70
521 522 2.115291 GGCATGGAGAAGGTTCGCC 61.115 63.158 5.60 5.60 45.94 5.54
522 523 2.115291 GCATGGAGAAGGTTCGCCC 61.115 63.158 9.68 4.13 45.26 6.13
523 524 1.452108 CATGGAGAAGGTTCGCCCC 60.452 63.158 9.68 1.92 45.26 5.80
524 525 3.031417 ATGGAGAAGGTTCGCCCCG 62.031 63.158 9.68 0.00 45.26 5.73
535 536 4.878682 CGCCCCGCCCGTTAGTAC 62.879 72.222 0.00 0.00 0.00 2.73
536 537 3.464494 GCCCCGCCCGTTAGTACT 61.464 66.667 0.00 0.00 0.00 2.73
537 538 2.127232 GCCCCGCCCGTTAGTACTA 61.127 63.158 0.00 0.00 0.00 1.82
538 539 1.675720 GCCCCGCCCGTTAGTACTAA 61.676 60.000 11.38 11.38 0.00 2.24
539 540 0.823460 CCCCGCCCGTTAGTACTAAA 59.177 55.000 16.82 0.00 0.00 1.85
540 541 1.206849 CCCCGCCCGTTAGTACTAAAA 59.793 52.381 16.82 0.00 0.00 1.52
541 542 2.354604 CCCCGCCCGTTAGTACTAAAAA 60.355 50.000 16.82 0.00 0.00 1.94
563 564 6.846325 AAAACGAGGAAGTACTTTTCTCAG 57.154 37.500 25.78 21.76 0.00 3.35
564 565 5.532664 AACGAGGAAGTACTTTTCTCAGT 57.467 39.130 25.78 22.15 0.00 3.41
565 566 5.123805 ACGAGGAAGTACTTTTCTCAGTC 57.876 43.478 25.78 8.79 0.00 3.51
566 567 4.583489 ACGAGGAAGTACTTTTCTCAGTCA 59.417 41.667 25.78 0.00 0.00 3.41
567 568 4.918583 CGAGGAAGTACTTTTCTCAGTCAC 59.081 45.833 25.78 7.54 0.00 3.67
568 569 4.872664 AGGAAGTACTTTTCTCAGTCACG 58.127 43.478 10.02 0.00 0.00 4.35
569 570 3.988517 GGAAGTACTTTTCTCAGTCACGG 59.011 47.826 10.02 0.00 0.00 4.94
570 571 3.662247 AGTACTTTTCTCAGTCACGGG 57.338 47.619 0.00 0.00 0.00 5.28
571 572 2.067013 GTACTTTTCTCAGTCACGGGC 58.933 52.381 0.00 0.00 0.00 6.13
572 573 0.600255 ACTTTTCTCAGTCACGGGCG 60.600 55.000 0.00 0.00 0.00 6.13
573 574 0.319555 CTTTTCTCAGTCACGGGCGA 60.320 55.000 0.00 0.00 0.00 5.54
574 575 0.320374 TTTTCTCAGTCACGGGCGAT 59.680 50.000 0.00 0.00 0.00 4.58
575 576 0.108804 TTTCTCAGTCACGGGCGATC 60.109 55.000 0.00 0.00 0.00 3.69
576 577 2.266376 TTCTCAGTCACGGGCGATCG 62.266 60.000 11.69 11.69 0.00 3.69
577 578 3.758088 CTCAGTCACGGGCGATCGG 62.758 68.421 18.30 2.45 0.00 4.18
578 579 4.873129 CAGTCACGGGCGATCGGG 62.873 72.222 18.30 0.00 34.40 5.14
593 594 4.104143 GGGACGTGCGAATGGTAG 57.896 61.111 0.00 0.00 0.00 3.18
594 595 1.217244 GGGACGTGCGAATGGTAGT 59.783 57.895 0.00 0.00 0.00 2.73
595 596 0.390735 GGGACGTGCGAATGGTAGTT 60.391 55.000 0.00 0.00 0.00 2.24
596 597 0.719465 GGACGTGCGAATGGTAGTTG 59.281 55.000 0.00 0.00 0.00 3.16
597 598 0.094730 GACGTGCGAATGGTAGTTGC 59.905 55.000 0.00 0.00 0.00 4.17
598 599 0.601576 ACGTGCGAATGGTAGTTGCA 60.602 50.000 0.00 0.00 0.00 4.08
599 600 0.095245 CGTGCGAATGGTAGTTGCAG 59.905 55.000 0.00 0.00 36.03 4.41
600 601 1.438651 GTGCGAATGGTAGTTGCAGA 58.561 50.000 0.00 0.00 36.03 4.26
601 602 1.804151 GTGCGAATGGTAGTTGCAGAA 59.196 47.619 0.00 0.00 36.03 3.02
602 603 2.225491 GTGCGAATGGTAGTTGCAGAAA 59.775 45.455 0.00 0.00 36.03 2.52
603 604 2.225491 TGCGAATGGTAGTTGCAGAAAC 59.775 45.455 0.00 0.00 39.24 2.78
604 605 2.724839 GCGAATGGTAGTTGCAGAAACG 60.725 50.000 0.00 0.00 44.04 3.60
605 606 2.159707 CGAATGGTAGTTGCAGAAACGG 60.160 50.000 0.00 0.00 44.04 4.44
606 607 2.851263 ATGGTAGTTGCAGAAACGGA 57.149 45.000 0.00 0.00 44.04 4.69
607 608 1.873698 TGGTAGTTGCAGAAACGGAC 58.126 50.000 0.00 0.00 44.04 4.79
608 609 1.139256 TGGTAGTTGCAGAAACGGACA 59.861 47.619 2.70 0.00 44.04 4.02
609 610 2.224426 TGGTAGTTGCAGAAACGGACAT 60.224 45.455 2.70 0.00 44.04 3.06
610 611 2.159627 GGTAGTTGCAGAAACGGACATG 59.840 50.000 0.00 0.00 44.04 3.21
611 612 0.593128 AGTTGCAGAAACGGACATGC 59.407 50.000 0.00 0.00 44.04 4.06
612 613 0.310543 GTTGCAGAAACGGACATGCA 59.689 50.000 3.88 3.88 46.29 3.96
613 614 1.948508 TGCAGAAACGGACATGCAC 59.051 52.632 0.00 0.00 43.34 4.57
614 615 0.534877 TGCAGAAACGGACATGCACT 60.535 50.000 0.00 0.00 43.34 4.40
615 616 0.593128 GCAGAAACGGACATGCACTT 59.407 50.000 0.00 0.00 38.54 3.16
616 617 1.664016 GCAGAAACGGACATGCACTTG 60.664 52.381 0.00 0.00 38.54 3.16
617 618 0.593128 AGAAACGGACATGCACTTGC 59.407 50.000 0.00 0.00 42.50 4.01
618 619 0.593128 GAAACGGACATGCACTTGCT 59.407 50.000 2.33 0.00 42.66 3.91
619 620 1.001378 GAAACGGACATGCACTTGCTT 60.001 47.619 2.33 0.00 42.66 3.91
620 621 1.032014 AACGGACATGCACTTGCTTT 58.968 45.000 2.33 0.00 42.66 3.51
621 622 0.311790 ACGGACATGCACTTGCTTTG 59.688 50.000 2.33 3.30 42.66 2.77
622 623 1.005294 CGGACATGCACTTGCTTTGC 61.005 55.000 2.33 0.00 42.66 3.68
623 624 0.668401 GGACATGCACTTGCTTTGCC 60.668 55.000 2.33 3.46 42.66 4.52
624 625 0.032403 GACATGCACTTGCTTTGCCA 59.968 50.000 2.33 0.00 42.66 4.92
625 626 0.032952 ACATGCACTTGCTTTGCCAG 59.967 50.000 2.33 0.00 42.66 4.85
626 627 0.032952 CATGCACTTGCTTTGCCAGT 59.967 50.000 2.33 0.00 42.66 4.00
627 628 0.316204 ATGCACTTGCTTTGCCAGTC 59.684 50.000 2.33 0.00 42.66 3.51
628 629 1.370900 GCACTTGCTTTGCCAGTCG 60.371 57.895 0.00 0.00 32.12 4.18
629 630 1.370900 CACTTGCTTTGCCAGTCGC 60.371 57.895 0.00 0.00 32.12 5.19
630 631 2.256461 CTTGCTTTGCCAGTCGCC 59.744 61.111 0.00 0.00 36.24 5.54
631 632 2.518112 TTGCTTTGCCAGTCGCCA 60.518 55.556 0.00 0.00 36.24 5.69
632 633 1.870055 CTTGCTTTGCCAGTCGCCAT 61.870 55.000 0.00 0.00 36.24 4.40
633 634 2.144833 TTGCTTTGCCAGTCGCCATG 62.145 55.000 0.00 0.00 36.24 3.66
634 635 2.879907 CTTTGCCAGTCGCCATGG 59.120 61.111 7.63 7.63 41.04 3.66
635 636 1.973281 CTTTGCCAGTCGCCATGGT 60.973 57.895 14.67 0.00 40.17 3.55
636 637 1.926511 CTTTGCCAGTCGCCATGGTC 61.927 60.000 14.67 4.79 40.17 4.02
663 664 1.293498 CAAGGACGTGCACTAGGCT 59.707 57.895 16.19 0.00 45.15 4.58
1057 1058 2.284625 TCCTGTCCGTGGCCATCT 60.285 61.111 9.72 0.00 0.00 2.90
1191 1201 3.302347 CTCGCTCCCCAAGAACGCT 62.302 63.158 0.00 0.00 34.02 5.07
1548 1573 3.766691 AACTCCACGCGCCGGTAT 61.767 61.111 5.73 0.00 0.00 2.73
1624 1655 4.008933 GCACGCCAGACCTGACCT 62.009 66.667 0.00 0.00 0.00 3.85
1627 1658 3.374402 CGCCAGACCTGACCTCGT 61.374 66.667 0.00 0.00 0.00 4.18
1692 1723 0.039437 AGCTGTTCGTGGACAGTACG 60.039 55.000 9.91 0.00 46.81 3.67
1719 1750 0.607620 GAGCTCTTCAGGTCAGCTGT 59.392 55.000 14.67 0.00 43.72 4.40
1803 1834 4.641645 CCGAGCACCCAAGCACCA 62.642 66.667 0.00 0.00 36.85 4.17
1909 1949 1.901159 ACCATGCTTGCATTTGCCTTA 59.099 42.857 5.24 0.00 41.18 2.69
1936 1976 1.511850 TTTGGCACAGTGATCGACAG 58.488 50.000 4.15 0.00 42.39 3.51
1957 1997 4.505191 CAGCAAACAATTCAGTGTTTCCAG 59.495 41.667 2.47 0.00 46.29 3.86
1980 2020 1.523154 TTGGCAACGGACCAATCAGC 61.523 55.000 0.00 0.00 42.23 4.26
2050 2091 2.228582 GCAAATTTTGGCAATGAACCCC 59.771 45.455 10.96 0.00 0.00 4.95
2051 2092 2.819019 CAAATTTTGGCAATGAACCCCC 59.181 45.455 0.00 0.00 0.00 5.40
2083 2124 8.893563 AAACCCTGAAAGATACCATGATAAAA 57.106 30.769 0.00 0.00 34.07 1.52
2199 2243 5.484998 ACAAAAGGAGCCATGTGGAAAATAT 59.515 36.000 2.55 0.00 37.39 1.28
2397 2813 8.594550 GTCCCTAGCATGGTTCTTATTATTCTA 58.405 37.037 1.12 0.00 0.00 2.10
2404 2820 7.308229 GCATGGTTCTTATTATTCTACTGCCTG 60.308 40.741 0.00 0.00 0.00 4.85
2533 2964 3.511540 GGGAAAGATTTCAAAGGACCCAG 59.488 47.826 7.56 0.00 38.92 4.45
2618 3058 0.460987 GCTGACGAGGAGGACAATGG 60.461 60.000 0.00 0.00 0.00 3.16
2737 3177 5.172934 CGGTGTACAAGGTGCTAAATAGAA 58.827 41.667 0.00 0.00 0.00 2.10
2804 3247 8.635765 ATTGAGCTTAACTTTGGTTCAATCTA 57.364 30.769 0.00 0.00 36.63 1.98
2844 3287 0.717224 GCGACGAAATAGCCGTGAAA 59.283 50.000 0.00 0.00 40.67 2.69
2868 3311 4.101942 GACTATCGAAGAGCTCAACACAG 58.898 47.826 17.77 7.98 43.63 3.66
2883 3326 1.923850 ACACAGGGAGTAGAGGAGCTA 59.076 52.381 0.00 0.00 0.00 3.32
3081 3525 6.263392 CCTCCTTCTCTCTACATATTCGACAA 59.737 42.308 0.00 0.00 0.00 3.18
3226 3670 2.041755 TGAAGACTCCCAGCTCAGAGTA 59.958 50.000 13.80 0.00 43.32 2.59
3247 3691 0.684535 TCCACCGTGATCTCAAAGCA 59.315 50.000 0.00 0.00 0.00 3.91
3259 3703 5.706833 TGATCTCAAAGCAAGCAACATCTTA 59.293 36.000 0.00 0.00 0.00 2.10
3271 3715 6.942532 AGCAACATCTTACTTGACAAAGAA 57.057 33.333 0.00 0.00 35.47 2.52
3689 4134 2.025636 ACCACTTAGTAGGCCACAGT 57.974 50.000 5.01 0.00 0.00 3.55
3690 4135 2.335933 ACCACTTAGTAGGCCACAGTT 58.664 47.619 5.01 0.00 0.00 3.16
3750 4196 7.617041 TTAATTAAGAAGAGAGCTTTCTGGC 57.383 36.000 7.67 3.55 33.61 4.85
3758 4204 5.289083 AGAGAGCTTTCTGGCTAATTAGG 57.711 43.478 14.28 0.00 43.20 2.69
3759 4205 4.102367 AGAGAGCTTTCTGGCTAATTAGGG 59.898 45.833 14.28 0.00 43.20 3.53
3790 4236 3.412386 GGTGGAAACATGCACTTAGACT 58.588 45.455 0.00 0.00 46.14 3.24
3791 4237 3.821033 GGTGGAAACATGCACTTAGACTT 59.179 43.478 0.00 0.00 46.14 3.01
3792 4238 5.001232 GGTGGAAACATGCACTTAGACTTA 58.999 41.667 0.00 0.00 46.14 2.24
3793 4239 5.472137 GGTGGAAACATGCACTTAGACTTAA 59.528 40.000 0.00 0.00 46.14 1.85
3873 4319 2.357050 GGTGTTGGACATGATGGATCCA 60.357 50.000 18.88 18.88 40.83 3.41
3904 4350 1.682005 AGCTTCTCAGAGAGCGGCT 60.682 57.895 0.00 0.00 34.50 5.52
4014 4460 1.280142 CGATACCGTGCCTCTCTCG 59.720 63.158 0.00 0.00 0.00 4.04
4081 4527 0.037697 TGGCATCGCGTCAACTTAGT 60.038 50.000 5.77 0.00 0.00 2.24
4280 5175 4.341235 GGTTAGAGGGGCCATGTTAAAATC 59.659 45.833 4.39 0.00 0.00 2.17
4281 5176 3.756082 AGAGGGGCCATGTTAAAATCA 57.244 42.857 4.39 0.00 0.00 2.57
4384 5279 6.445357 AAAGTGTGGTTTTTATTGACTCGT 57.555 33.333 0.00 0.00 0.00 4.18
4427 5676 8.314751 GGTATGTATGGATAAACATGTAGAGCT 58.685 37.037 0.00 0.00 36.96 4.09
4500 6021 3.698040 GACATCATGGCAAGGTTCAGAAT 59.302 43.478 0.00 0.00 0.00 2.40
4521 6042 1.915141 AGGTTCAACAGGAAGGCATG 58.085 50.000 0.00 0.00 35.82 4.06
4585 6111 0.328258 AACCAAAGGATGCGTAGGCT 59.672 50.000 9.11 0.00 40.82 4.58
4589 6115 1.398390 CAAAGGATGCGTAGGCTTGAC 59.602 52.381 9.11 0.00 40.82 3.18
4611 6137 6.638873 TGACAATAAACACATAAACTTTGCGG 59.361 34.615 0.00 0.00 0.00 5.69
4622 6148 2.203224 TTTGCGGCGGTTCTCCAA 60.203 55.556 9.78 0.00 0.00 3.53
4643 6443 2.820728 GGGGGCAATGGGGTATATAC 57.179 55.000 4.14 4.14 0.00 1.47
4674 6474 1.745489 GGCGCGGATCTTGGAAACT 60.745 57.895 8.83 0.00 0.00 2.66
4716 6516 0.462759 CCAAGGCTTTAGCGAGAGGG 60.463 60.000 0.00 0.00 43.26 4.30
4717 6517 0.462759 CAAGGCTTTAGCGAGAGGGG 60.463 60.000 0.00 0.00 43.26 4.79
4724 6524 0.970937 TTAGCGAGAGGGGTCCACTG 60.971 60.000 0.00 0.00 0.00 3.66
4745 6545 6.925165 CACTGCTGAATAAAGACAACCATTTT 59.075 34.615 0.00 0.00 0.00 1.82
4790 6590 7.379529 ACAGTTTGTAAAAGAAATGCTCAATCG 59.620 33.333 0.00 0.00 0.00 3.34
4839 6639 3.631250 ACAACCCAAGAGAAGCAAAAGA 58.369 40.909 0.00 0.00 0.00 2.52
4849 6649 7.254556 CCAAGAGAAGCAAAAGAATTCCAAAAC 60.255 37.037 0.65 0.00 0.00 2.43
4862 6662 2.312390 TCCAAAACACCCTAGCAAACC 58.688 47.619 0.00 0.00 0.00 3.27
4868 6668 0.331278 CACCCTAGCAAACCATCCCA 59.669 55.000 0.00 0.00 0.00 4.37
4873 6673 2.421529 CCTAGCAAACCATCCCAGGTAC 60.422 54.545 0.00 0.00 42.25 3.34
4887 6687 1.398390 CAGGTACTTTCAAGGATGCGC 59.602 52.381 0.00 0.00 34.60 6.09
4910 6710 1.081277 GAGACCAGGGAGGGGAAGT 59.919 63.158 0.00 0.00 43.89 3.01
4927 6727 4.020617 TGGGCTCCGGCTTGACAG 62.021 66.667 0.00 0.00 38.73 3.51
4977 6777 0.670854 GACTTTGGACGTGGAGGAGC 60.671 60.000 0.00 0.00 0.00 4.70
5009 6809 1.050204 ATCAGCTCCATCTGCTCCTC 58.950 55.000 0.00 0.00 38.92 3.71
5012 6812 1.227205 GCTCCATCTGCTCCTCGTG 60.227 63.158 0.00 0.00 0.00 4.35
5038 6838 5.665916 AGTATCCATCATCGCATACATCA 57.334 39.130 0.00 0.00 0.00 3.07
5039 6839 6.231258 AGTATCCATCATCGCATACATCAT 57.769 37.500 0.00 0.00 0.00 2.45
5046 6846 3.070015 TCATCGCATACATCATGTCCTGT 59.930 43.478 0.00 0.00 36.95 4.00
5068 6868 2.887568 GGATGAGTGTCTGCGGCG 60.888 66.667 0.51 0.51 0.00 6.46
5070 6870 3.649277 GATGAGTGTCTGCGGCGGT 62.649 63.158 9.78 0.00 0.00 5.68
5072 6872 4.357947 GAGTGTCTGCGGCGGTGA 62.358 66.667 9.78 0.00 0.00 4.02
5073 6873 4.664677 AGTGTCTGCGGCGGTGAC 62.665 66.667 9.78 10.63 0.00 3.67
5074 6874 4.664677 GTGTCTGCGGCGGTGACT 62.665 66.667 9.78 0.00 0.00 3.41
5075 6875 4.662961 TGTCTGCGGCGGTGACTG 62.663 66.667 9.78 0.00 0.00 3.51
5113 6913 4.135153 CGGTGCTGGTCCTCCTCG 62.135 72.222 0.00 0.00 34.23 4.63
5185 6985 1.007038 GTAAGACGGTGTCGCCACA 60.007 57.895 0.00 0.00 43.71 4.17
5224 7024 2.584391 GGTGTCGAGGCCCAAGACT 61.584 63.158 19.35 0.00 36.01 3.24
5228 7028 0.250338 GTCGAGGCCCAAGACTTGTT 60.250 55.000 14.03 0.00 32.58 2.83
5234 7034 1.541588 GGCCCAAGACTTGTTCATCAC 59.458 52.381 14.03 0.00 0.00 3.06
5235 7035 2.508526 GCCCAAGACTTGTTCATCACT 58.491 47.619 14.03 0.00 0.00 3.41
5237 7037 2.816087 CCCAAGACTTGTTCATCACTGG 59.184 50.000 14.03 1.20 0.00 4.00
5238 7038 3.496692 CCCAAGACTTGTTCATCACTGGA 60.497 47.826 14.03 0.00 0.00 3.86
5251 7051 4.021104 TCATCACTGGAGAGTACTTTGTGG 60.021 45.833 0.00 0.00 0.00 4.17
5255 7055 1.616865 TGGAGAGTACTTTGTGGACGG 59.383 52.381 0.00 0.00 0.00 4.79
5257 7057 0.038526 AGAGTACTTTGTGGACGGCG 60.039 55.000 4.80 4.80 0.00 6.46
5258 7058 1.623973 GAGTACTTTGTGGACGGCGC 61.624 60.000 6.90 0.00 0.00 6.53
5276 7076 1.128692 CGCCGAACAGACTTTTCCATC 59.871 52.381 0.00 0.00 0.00 3.51
5277 7077 2.151202 GCCGAACAGACTTTTCCATCA 58.849 47.619 0.00 0.00 0.00 3.07
5281 7081 3.187227 CGAACAGACTTTTCCATCACTGG 59.813 47.826 0.00 0.00 44.64 4.00
5291 7091 2.894731 TCCATCACTGGAGACTTGTCT 58.105 47.619 2.59 2.59 46.95 3.41
5292 7092 4.047627 TCCATCACTGGAGACTTGTCTA 57.952 45.455 3.00 0.00 46.95 2.59
5293 7093 4.614475 TCCATCACTGGAGACTTGTCTAT 58.386 43.478 3.00 0.00 46.95 1.98
5295 7095 4.648762 CCATCACTGGAGACTTGTCTATCT 59.351 45.833 3.00 0.00 46.37 1.98
5298 7098 3.446873 CACTGGAGACTTGTCTATCTGCT 59.553 47.826 3.00 0.00 34.60 4.24
5299 7099 4.081752 CACTGGAGACTTGTCTATCTGCTT 60.082 45.833 3.00 0.00 34.60 3.91
5300 7100 4.530161 ACTGGAGACTTGTCTATCTGCTTT 59.470 41.667 3.00 0.00 34.60 3.51
5302 7102 6.211584 ACTGGAGACTTGTCTATCTGCTTTAA 59.788 38.462 3.00 0.00 34.60 1.52
5314 7130 0.386605 TGCTTTAATGTGGCGCAACG 60.387 50.000 11.00 0.00 0.00 4.10
5336 7152 3.990318 CCAAAGTTGGTTTCTCAGGAC 57.010 47.619 1.63 0.00 43.43 3.85
5342 7158 1.301716 GGTTTCTCAGGACGCTGCA 60.302 57.895 0.00 0.00 0.00 4.41
5384 7200 0.318699 CGAGAGGTTGCGTCTGTCAA 60.319 55.000 0.00 0.00 0.00 3.18
5387 7203 1.070758 AGAGGTTGCGTCTGTCAATGT 59.929 47.619 0.00 0.00 0.00 2.71
5431 7247 4.256090 GGCATCAATGTCGGCCGC 62.256 66.667 23.51 16.75 36.58 6.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 4.078516 AACGGCTCCTGTACGGCC 62.079 66.667 0.00 0.00 42.18 6.13
4 5 2.125673 CCAACGGCTCCTGTACGG 60.126 66.667 0.00 0.00 0.00 4.02
6 7 1.218316 CTCCCAACGGCTCCTGTAC 59.782 63.158 0.00 0.00 0.00 2.90
8 9 4.021925 GCTCCCAACGGCTCCTGT 62.022 66.667 0.00 0.00 0.00 4.00
22 23 2.202797 TTGATGGAGAGCGCGCTC 60.203 61.111 45.46 45.46 43.03 5.03
23 24 2.510238 GTTGATGGAGAGCGCGCT 60.510 61.111 37.28 37.28 0.00 5.92
24 25 2.510238 AGTTGATGGAGAGCGCGC 60.510 61.111 26.66 26.66 0.00 6.86
25 26 0.869454 GAGAGTTGATGGAGAGCGCG 60.869 60.000 0.00 0.00 0.00 6.86
26 27 0.529555 GGAGAGTTGATGGAGAGCGC 60.530 60.000 0.00 0.00 0.00 5.92
27 28 1.110442 AGGAGAGTTGATGGAGAGCG 58.890 55.000 0.00 0.00 0.00 5.03
28 29 3.027412 TGTAGGAGAGTTGATGGAGAGC 58.973 50.000 0.00 0.00 0.00 4.09
29 30 4.709397 AGTTGTAGGAGAGTTGATGGAGAG 59.291 45.833 0.00 0.00 0.00 3.20
30 31 4.678256 AGTTGTAGGAGAGTTGATGGAGA 58.322 43.478 0.00 0.00 0.00 3.71
31 32 5.654650 AGTAGTTGTAGGAGAGTTGATGGAG 59.345 44.000 0.00 0.00 0.00 3.86
32 33 5.580998 AGTAGTTGTAGGAGAGTTGATGGA 58.419 41.667 0.00 0.00 0.00 3.41
33 34 5.449314 CGAGTAGTTGTAGGAGAGTTGATGG 60.449 48.000 0.00 0.00 0.00 3.51
34 35 5.574082 CGAGTAGTTGTAGGAGAGTTGATG 58.426 45.833 0.00 0.00 0.00 3.07
35 36 4.096682 GCGAGTAGTTGTAGGAGAGTTGAT 59.903 45.833 0.00 0.00 0.00 2.57
36 37 3.439476 GCGAGTAGTTGTAGGAGAGTTGA 59.561 47.826 0.00 0.00 0.00 3.18
37 38 3.190744 TGCGAGTAGTTGTAGGAGAGTTG 59.809 47.826 0.00 0.00 0.00 3.16
38 39 3.190953 GTGCGAGTAGTTGTAGGAGAGTT 59.809 47.826 0.00 0.00 0.00 3.01
39 40 2.748532 GTGCGAGTAGTTGTAGGAGAGT 59.251 50.000 0.00 0.00 0.00 3.24
40 41 3.011119 AGTGCGAGTAGTTGTAGGAGAG 58.989 50.000 0.00 0.00 0.00 3.20
41 42 3.008330 GAGTGCGAGTAGTTGTAGGAGA 58.992 50.000 0.00 0.00 0.00 3.71
42 43 2.097791 GGAGTGCGAGTAGTTGTAGGAG 59.902 54.545 0.00 0.00 0.00 3.69
43 44 2.089980 GGAGTGCGAGTAGTTGTAGGA 58.910 52.381 0.00 0.00 0.00 2.94
44 45 1.134560 GGGAGTGCGAGTAGTTGTAGG 59.865 57.143 0.00 0.00 0.00 3.18
45 46 1.202154 CGGGAGTGCGAGTAGTTGTAG 60.202 57.143 0.00 0.00 0.00 2.74
46 47 0.806868 CGGGAGTGCGAGTAGTTGTA 59.193 55.000 0.00 0.00 0.00 2.41
47 48 1.177256 ACGGGAGTGCGAGTAGTTGT 61.177 55.000 0.00 0.00 44.82 3.32
48 49 0.806868 TACGGGAGTGCGAGTAGTTG 59.193 55.000 0.00 0.00 46.80 3.16
49 50 0.807496 GTACGGGAGTGCGAGTAGTT 59.193 55.000 0.00 0.00 46.80 2.24
50 51 2.475666 GTACGGGAGTGCGAGTAGT 58.524 57.895 0.00 0.00 46.80 2.73
57 58 1.518572 CACGGATGTACGGGAGTGC 60.519 63.158 0.00 0.00 46.80 4.40
58 59 0.179145 GACACGGATGTACGGGAGTG 60.179 60.000 0.00 8.98 46.80 3.51
60 61 1.602851 CTAGACACGGATGTACGGGAG 59.397 57.143 0.00 0.00 40.35 4.30
61 62 1.210234 TCTAGACACGGATGTACGGGA 59.790 52.381 0.00 0.00 40.35 5.14
62 63 1.671979 TCTAGACACGGATGTACGGG 58.328 55.000 0.00 0.00 39.95 5.28
63 64 5.428496 TTTATCTAGACACGGATGTACGG 57.572 43.478 0.00 0.00 39.95 4.02
67 68 8.251721 GCCTTATATTTATCTAGACACGGATGT 58.748 37.037 0.00 0.00 43.71 3.06
68 69 8.251026 TGCCTTATATTTATCTAGACACGGATG 58.749 37.037 0.00 0.00 0.00 3.51
69 70 8.362464 TGCCTTATATTTATCTAGACACGGAT 57.638 34.615 0.00 0.00 0.00 4.18
70 71 7.770366 TGCCTTATATTTATCTAGACACGGA 57.230 36.000 0.00 0.00 0.00 4.69
71 72 8.304596 TCTTGCCTTATATTTATCTAGACACGG 58.695 37.037 0.00 0.00 0.00 4.94
72 73 9.692749 TTCTTGCCTTATATTTATCTAGACACG 57.307 33.333 0.00 0.00 0.00 4.49
82 83 8.339714 CGTCCGAAAATTCTTGCCTTATATTTA 58.660 33.333 0.00 0.00 0.00 1.40
83 84 7.066525 TCGTCCGAAAATTCTTGCCTTATATTT 59.933 33.333 0.00 0.00 0.00 1.40
84 85 6.540914 TCGTCCGAAAATTCTTGCCTTATATT 59.459 34.615 0.00 0.00 0.00 1.28
85 86 6.018180 GTCGTCCGAAAATTCTTGCCTTATAT 60.018 38.462 0.00 0.00 0.00 0.86
86 87 5.292589 GTCGTCCGAAAATTCTTGCCTTATA 59.707 40.000 0.00 0.00 0.00 0.98
87 88 4.094442 GTCGTCCGAAAATTCTTGCCTTAT 59.906 41.667 0.00 0.00 0.00 1.73
88 89 3.434299 GTCGTCCGAAAATTCTTGCCTTA 59.566 43.478 0.00 0.00 0.00 2.69
89 90 2.225727 GTCGTCCGAAAATTCTTGCCTT 59.774 45.455 0.00 0.00 0.00 4.35
90 91 1.804748 GTCGTCCGAAAATTCTTGCCT 59.195 47.619 0.00 0.00 0.00 4.75
91 92 1.533731 TGTCGTCCGAAAATTCTTGCC 59.466 47.619 0.00 0.00 0.00 4.52
92 93 2.961522 TGTCGTCCGAAAATTCTTGC 57.038 45.000 0.00 0.00 0.00 4.01
93 94 4.003519 GGATGTCGTCCGAAAATTCTTG 57.996 45.455 0.00 0.00 37.23 3.02
109 110 8.251721 GCCTTATATTTATCTAGACACGGATGT 58.748 37.037 0.00 0.00 43.71 3.06
110 111 8.251026 TGCCTTATATTTATCTAGACACGGATG 58.749 37.037 0.00 0.00 0.00 3.51
111 112 8.362464 TGCCTTATATTTATCTAGACACGGAT 57.638 34.615 0.00 0.00 0.00 4.18
112 113 7.770366 TGCCTTATATTTATCTAGACACGGA 57.230 36.000 0.00 0.00 0.00 4.69
113 114 8.304596 TCTTGCCTTATATTTATCTAGACACGG 58.695 37.037 0.00 0.00 0.00 4.94
114 115 9.692749 TTCTTGCCTTATATTTATCTAGACACG 57.307 33.333 0.00 0.00 0.00 4.49
124 125 8.339714 CGTCCGAAAATTCTTGCCTTATATTTA 58.660 33.333 0.00 0.00 0.00 1.40
125 126 7.066525 TCGTCCGAAAATTCTTGCCTTATATTT 59.933 33.333 0.00 0.00 0.00 1.40
126 127 6.540914 TCGTCCGAAAATTCTTGCCTTATATT 59.459 34.615 0.00 0.00 0.00 1.28
127 128 6.053005 TCGTCCGAAAATTCTTGCCTTATAT 58.947 36.000 0.00 0.00 0.00 0.86
128 129 5.421277 TCGTCCGAAAATTCTTGCCTTATA 58.579 37.500 0.00 0.00 0.00 0.98
129 130 4.258543 TCGTCCGAAAATTCTTGCCTTAT 58.741 39.130 0.00 0.00 0.00 1.73
130 131 3.666274 TCGTCCGAAAATTCTTGCCTTA 58.334 40.909 0.00 0.00 0.00 2.69
131 132 2.500229 TCGTCCGAAAATTCTTGCCTT 58.500 42.857 0.00 0.00 0.00 4.35
132 133 2.178912 TCGTCCGAAAATTCTTGCCT 57.821 45.000 0.00 0.00 0.00 4.75
133 134 2.414161 CCTTCGTCCGAAAATTCTTGCC 60.414 50.000 3.52 0.00 33.34 4.52
134 135 2.414161 CCCTTCGTCCGAAAATTCTTGC 60.414 50.000 3.52 0.00 33.34 4.01
135 136 3.071479 TCCCTTCGTCCGAAAATTCTTG 58.929 45.455 3.52 0.00 33.34 3.02
136 137 3.244457 ACTCCCTTCGTCCGAAAATTCTT 60.244 43.478 3.52 0.00 33.34 2.52
137 138 2.302157 ACTCCCTTCGTCCGAAAATTCT 59.698 45.455 3.52 0.00 33.34 2.40
138 139 2.696506 ACTCCCTTCGTCCGAAAATTC 58.303 47.619 3.52 0.00 33.34 2.17
139 140 2.853235 ACTCCCTTCGTCCGAAAATT 57.147 45.000 3.52 0.00 33.34 1.82
140 141 2.830321 AGTACTCCCTTCGTCCGAAAAT 59.170 45.455 3.52 0.00 33.34 1.82
141 142 2.242043 AGTACTCCCTTCGTCCGAAAA 58.758 47.619 3.52 0.00 33.34 2.29
142 143 1.915141 AGTACTCCCTTCGTCCGAAA 58.085 50.000 3.52 0.00 33.34 3.46
143 144 1.815003 GAAGTACTCCCTTCGTCCGAA 59.185 52.381 0.00 1.81 32.23 4.30
144 145 1.004044 AGAAGTACTCCCTTCGTCCGA 59.996 52.381 0.00 0.00 44.46 4.55
145 146 1.401199 GAGAAGTACTCCCTTCGTCCG 59.599 57.143 0.00 0.00 44.46 4.79
146 147 2.444421 TGAGAAGTACTCCCTTCGTCC 58.556 52.381 0.00 0.00 44.46 4.79
147 148 4.158025 TGATTGAGAAGTACTCCCTTCGTC 59.842 45.833 0.00 0.00 44.46 4.20
148 149 4.082136 GTGATTGAGAAGTACTCCCTTCGT 60.082 45.833 0.00 0.00 44.46 3.85
149 150 4.425520 GTGATTGAGAAGTACTCCCTTCG 58.574 47.826 0.00 0.00 44.46 3.79
150 151 4.425520 CGTGATTGAGAAGTACTCCCTTC 58.574 47.826 0.00 0.00 44.34 3.46
151 152 3.195825 CCGTGATTGAGAAGTACTCCCTT 59.804 47.826 0.00 0.00 44.34 3.95
152 153 2.761208 CCGTGATTGAGAAGTACTCCCT 59.239 50.000 0.00 0.00 44.34 4.20
153 154 2.159085 CCCGTGATTGAGAAGTACTCCC 60.159 54.545 0.00 0.00 44.34 4.30
154 155 2.159085 CCCCGTGATTGAGAAGTACTCC 60.159 54.545 0.00 0.00 44.34 3.85
155 156 2.159085 CCCCCGTGATTGAGAAGTACTC 60.159 54.545 0.00 0.00 45.11 2.59
156 157 1.831736 CCCCCGTGATTGAGAAGTACT 59.168 52.381 0.00 0.00 0.00 2.73
157 158 1.829222 TCCCCCGTGATTGAGAAGTAC 59.171 52.381 0.00 0.00 0.00 2.73
158 159 2.241281 TCCCCCGTGATTGAGAAGTA 57.759 50.000 0.00 0.00 0.00 2.24
159 160 1.584724 ATCCCCCGTGATTGAGAAGT 58.415 50.000 0.00 0.00 0.00 3.01
160 161 2.717639 AATCCCCCGTGATTGAGAAG 57.282 50.000 0.00 0.00 33.77 2.85
166 167 1.613061 GTCCCAATCCCCCGTGATT 59.387 57.895 0.00 0.00 35.36 2.57
167 168 2.742116 CGTCCCAATCCCCCGTGAT 61.742 63.158 0.00 0.00 0.00 3.06
168 169 3.395702 CGTCCCAATCCCCCGTGA 61.396 66.667 0.00 0.00 0.00 4.35
169 170 3.712907 ACGTCCCAATCCCCCGTG 61.713 66.667 0.00 0.00 0.00 4.94
170 171 3.712907 CACGTCCCAATCCCCCGT 61.713 66.667 0.00 0.00 0.00 5.28
171 172 2.265467 ATTCACGTCCCAATCCCCCG 62.265 60.000 0.00 0.00 0.00 5.73
172 173 0.751643 CATTCACGTCCCAATCCCCC 60.752 60.000 0.00 0.00 0.00 5.40
173 174 1.384222 GCATTCACGTCCCAATCCCC 61.384 60.000 0.00 0.00 0.00 4.81
174 175 0.394352 AGCATTCACGTCCCAATCCC 60.394 55.000 0.00 0.00 0.00 3.85
175 176 2.213499 CTAGCATTCACGTCCCAATCC 58.787 52.381 0.00 0.00 0.00 3.01
176 177 2.906354 ACTAGCATTCACGTCCCAATC 58.094 47.619 0.00 0.00 0.00 2.67
177 178 3.009723 CAACTAGCATTCACGTCCCAAT 58.990 45.455 0.00 0.00 0.00 3.16
178 179 2.422597 CAACTAGCATTCACGTCCCAA 58.577 47.619 0.00 0.00 0.00 4.12
179 180 1.943968 GCAACTAGCATTCACGTCCCA 60.944 52.381 0.00 0.00 44.79 4.37
180 181 0.727398 GCAACTAGCATTCACGTCCC 59.273 55.000 0.00 0.00 44.79 4.46
237 238 0.739813 CCCCATTCCTTGTCGACGAC 60.740 60.000 20.97 20.97 0.00 4.34
238 239 1.594833 CCCCATTCCTTGTCGACGA 59.405 57.895 11.62 8.40 0.00 4.20
239 240 1.449601 CCCCCATTCCTTGTCGACG 60.450 63.158 11.62 0.00 0.00 5.12
240 241 0.107654 CTCCCCCATTCCTTGTCGAC 60.108 60.000 9.11 9.11 0.00 4.20
241 242 0.252513 TCTCCCCCATTCCTTGTCGA 60.253 55.000 0.00 0.00 0.00 4.20
242 243 0.107654 GTCTCCCCCATTCCTTGTCG 60.108 60.000 0.00 0.00 0.00 4.35
243 244 0.991920 TGTCTCCCCCATTCCTTGTC 59.008 55.000 0.00 0.00 0.00 3.18
244 245 0.698818 GTGTCTCCCCCATTCCTTGT 59.301 55.000 0.00 0.00 0.00 3.16
245 246 0.995024 AGTGTCTCCCCCATTCCTTG 59.005 55.000 0.00 0.00 0.00 3.61
246 247 1.760405 AAGTGTCTCCCCCATTCCTT 58.240 50.000 0.00 0.00 0.00 3.36
247 248 1.355720 CAAAGTGTCTCCCCCATTCCT 59.644 52.381 0.00 0.00 0.00 3.36
248 249 1.354368 TCAAAGTGTCTCCCCCATTCC 59.646 52.381 0.00 0.00 0.00 3.01
249 250 2.879103 TCAAAGTGTCTCCCCCATTC 57.121 50.000 0.00 0.00 0.00 2.67
250 251 2.379907 ACATCAAAGTGTCTCCCCCATT 59.620 45.455 0.00 0.00 0.00 3.16
251 252 1.995542 ACATCAAAGTGTCTCCCCCAT 59.004 47.619 0.00 0.00 0.00 4.00
252 253 1.073763 CACATCAAAGTGTCTCCCCCA 59.926 52.381 0.00 0.00 34.83 4.96
253 254 1.826385 CACATCAAAGTGTCTCCCCC 58.174 55.000 0.00 0.00 34.83 5.40
261 262 1.334059 GCACACGGACACATCAAAGTG 60.334 52.381 0.00 0.00 44.93 3.16
262 263 0.944386 GCACACGGACACATCAAAGT 59.056 50.000 0.00 0.00 0.00 2.66
263 264 0.238289 GGCACACGGACACATCAAAG 59.762 55.000 0.00 0.00 0.00 2.77
264 265 0.464554 TGGCACACGGACACATCAAA 60.465 50.000 0.00 0.00 0.00 2.69
265 266 0.464554 TTGGCACACGGACACATCAA 60.465 50.000 0.00 0.00 39.29 2.57
266 267 1.147153 TTGGCACACGGACACATCA 59.853 52.632 0.00 0.00 39.29 3.07
267 268 1.574428 GTTGGCACACGGACACATC 59.426 57.895 0.00 0.00 39.29 3.06
268 269 1.896660 GGTTGGCACACGGACACAT 60.897 57.895 0.00 0.00 39.29 3.21
269 270 2.515057 GGTTGGCACACGGACACA 60.515 61.111 0.00 0.00 39.29 3.72
270 271 3.284449 GGGTTGGCACACGGACAC 61.284 66.667 0.00 0.00 39.29 3.67
271 272 4.572571 GGGGTTGGCACACGGACA 62.573 66.667 0.00 0.00 39.29 4.02
287 288 3.174987 TGATGCCGGGTATGGGGG 61.175 66.667 2.18 0.00 0.00 5.40
288 289 2.113139 GTGATGCCGGGTATGGGG 59.887 66.667 2.18 0.00 0.00 4.96
289 290 1.071471 GAGTGATGCCGGGTATGGG 59.929 63.158 2.18 0.00 0.00 4.00
290 291 1.071471 GGAGTGATGCCGGGTATGG 59.929 63.158 2.18 0.00 0.00 2.74
291 292 0.532862 GTGGAGTGATGCCGGGTATG 60.533 60.000 2.18 0.00 0.00 2.39
292 293 1.830145 GTGGAGTGATGCCGGGTAT 59.170 57.895 2.18 0.00 0.00 2.73
293 294 2.717044 CGTGGAGTGATGCCGGGTA 61.717 63.158 2.18 0.00 0.00 3.69
294 295 4.082523 CGTGGAGTGATGCCGGGT 62.083 66.667 2.18 0.00 0.00 5.28
298 299 4.451150 TCCGCGTGGAGTGATGCC 62.451 66.667 15.21 0.00 40.17 4.40
313 314 1.764571 TATACATGTGGCGGGGCTCC 61.765 60.000 9.11 0.00 0.00 4.70
314 315 0.324943 ATATACATGTGGCGGGGCTC 59.675 55.000 9.11 0.00 0.00 4.70
315 316 0.771127 AATATACATGTGGCGGGGCT 59.229 50.000 9.11 0.00 0.00 5.19
316 317 1.616159 AAATATACATGTGGCGGGGC 58.384 50.000 9.11 0.00 0.00 5.80
317 318 4.825085 AGTTAAAATATACATGTGGCGGGG 59.175 41.667 9.11 0.00 0.00 5.73
318 319 6.385649 AAGTTAAAATATACATGTGGCGGG 57.614 37.500 9.11 0.00 0.00 6.13
319 320 6.198216 GCAAAGTTAAAATATACATGTGGCGG 59.802 38.462 9.11 0.00 0.00 6.13
320 321 6.972328 AGCAAAGTTAAAATATACATGTGGCG 59.028 34.615 9.11 0.00 0.00 5.69
321 322 9.450807 CTAGCAAAGTTAAAATATACATGTGGC 57.549 33.333 9.11 0.00 0.00 5.01
322 323 9.950680 CCTAGCAAAGTTAAAATATACATGTGG 57.049 33.333 9.11 0.00 0.00 4.17
325 326 9.884465 GCTCCTAGCAAAGTTAAAATATACATG 57.116 33.333 0.00 0.00 41.89 3.21
343 344 3.755378 CCATGGAATGTAATGCTCCTAGC 59.245 47.826 5.56 0.00 44.81 3.42
344 345 3.755378 GCCATGGAATGTAATGCTCCTAG 59.245 47.826 18.40 0.00 44.81 3.02
345 346 3.395607 AGCCATGGAATGTAATGCTCCTA 59.604 43.478 18.40 0.00 44.81 2.94
346 347 2.176364 AGCCATGGAATGTAATGCTCCT 59.824 45.455 18.40 0.00 44.81 3.69
347 348 2.590821 AGCCATGGAATGTAATGCTCC 58.409 47.619 18.40 0.00 44.81 4.70
348 349 4.365723 CAAAGCCATGGAATGTAATGCTC 58.634 43.478 18.40 0.00 44.81 4.26
349 350 3.431207 GCAAAGCCATGGAATGTAATGCT 60.431 43.478 18.40 0.00 44.81 3.79
350 351 2.867975 GCAAAGCCATGGAATGTAATGC 59.132 45.455 18.40 11.23 44.81 3.56
381 382 3.499737 GCACCAACCGATCAGGCG 61.500 66.667 3.85 0.00 46.52 5.52
382 383 2.045926 AGCACCAACCGATCAGGC 60.046 61.111 3.85 0.00 46.52 4.85
384 385 0.742281 CCAGAGCACCAACCGATCAG 60.742 60.000 0.00 0.00 0.00 2.90
385 386 1.191489 TCCAGAGCACCAACCGATCA 61.191 55.000 0.00 0.00 0.00 2.92
386 387 0.036388 TTCCAGAGCACCAACCGATC 60.036 55.000 0.00 0.00 0.00 3.69
387 388 0.321653 GTTCCAGAGCACCAACCGAT 60.322 55.000 0.00 0.00 0.00 4.18
388 389 1.070786 GTTCCAGAGCACCAACCGA 59.929 57.895 0.00 0.00 0.00 4.69
389 390 1.966451 GGTTCCAGAGCACCAACCG 60.966 63.158 0.00 0.00 32.74 4.44
390 391 1.603739 GGGTTCCAGAGCACCAACC 60.604 63.158 0.00 0.00 38.07 3.77
391 392 0.467290 TTGGGTTCCAGAGCACCAAC 60.467 55.000 0.00 0.00 36.37 3.77
392 393 0.178992 CTTGGGTTCCAGAGCACCAA 60.179 55.000 0.00 0.00 38.76 3.67
393 394 1.455849 CTTGGGTTCCAGAGCACCA 59.544 57.895 0.00 0.00 33.81 4.17
394 395 1.973812 GCTTGGGTTCCAGAGCACC 60.974 63.158 12.68 0.00 37.49 5.01
395 396 1.073897 AGCTTGGGTTCCAGAGCAC 59.926 57.895 16.95 0.00 38.85 4.40
396 397 1.073722 CAGCTTGGGTTCCAGAGCA 59.926 57.895 16.95 0.00 38.85 4.26
397 398 0.250901 TTCAGCTTGGGTTCCAGAGC 60.251 55.000 10.79 10.79 37.67 4.09
398 399 1.202806 TGTTCAGCTTGGGTTCCAGAG 60.203 52.381 0.00 0.00 33.81 3.35
399 400 0.843309 TGTTCAGCTTGGGTTCCAGA 59.157 50.000 0.00 0.00 33.81 3.86
400 401 1.542915 CATGTTCAGCTTGGGTTCCAG 59.457 52.381 0.00 0.00 33.81 3.86
401 402 1.619654 CATGTTCAGCTTGGGTTCCA 58.380 50.000 0.00 0.00 0.00 3.53
402 403 0.244721 GCATGTTCAGCTTGGGTTCC 59.755 55.000 0.00 0.00 0.00 3.62
403 404 0.961019 TGCATGTTCAGCTTGGGTTC 59.039 50.000 0.00 0.00 0.00 3.62
404 405 0.675633 GTGCATGTTCAGCTTGGGTT 59.324 50.000 0.00 0.00 0.00 4.11
405 406 0.467844 TGTGCATGTTCAGCTTGGGT 60.468 50.000 0.00 0.00 0.00 4.51
406 407 0.892755 ATGTGCATGTTCAGCTTGGG 59.107 50.000 0.00 0.00 0.00 4.12
407 408 1.135199 GGATGTGCATGTTCAGCTTGG 60.135 52.381 0.00 0.00 0.00 3.61
408 409 1.542472 TGGATGTGCATGTTCAGCTTG 59.458 47.619 0.00 0.00 0.00 4.01
409 410 1.913778 TGGATGTGCATGTTCAGCTT 58.086 45.000 0.00 0.00 0.00 3.74
410 411 1.913778 TTGGATGTGCATGTTCAGCT 58.086 45.000 0.00 0.00 0.00 4.24
411 412 2.331194 GTTTGGATGTGCATGTTCAGC 58.669 47.619 0.00 0.00 0.00 4.26
412 413 2.669113 CGGTTTGGATGTGCATGTTCAG 60.669 50.000 0.00 0.00 0.00 3.02
413 414 1.269174 CGGTTTGGATGTGCATGTTCA 59.731 47.619 0.00 0.00 0.00 3.18
414 415 1.402720 CCGGTTTGGATGTGCATGTTC 60.403 52.381 0.00 0.00 42.00 3.18
415 416 0.602562 CCGGTTTGGATGTGCATGTT 59.397 50.000 0.00 0.00 42.00 2.71
416 417 0.539438 ACCGGTTTGGATGTGCATGT 60.539 50.000 0.00 0.00 42.00 3.21
417 418 1.458398 TACCGGTTTGGATGTGCATG 58.542 50.000 15.04 0.00 42.00 4.06
418 419 2.208132 TTACCGGTTTGGATGTGCAT 57.792 45.000 15.04 0.00 42.00 3.96
419 420 1.982660 TTTACCGGTTTGGATGTGCA 58.017 45.000 15.04 0.00 42.00 4.57
420 421 2.608506 GGTTTTACCGGTTTGGATGTGC 60.609 50.000 15.04 0.00 42.00 4.57
421 422 2.029739 GGGTTTTACCGGTTTGGATGTG 60.030 50.000 15.04 0.00 39.83 3.21
422 423 2.241160 GGGTTTTACCGGTTTGGATGT 58.759 47.619 15.04 0.00 39.83 3.06
423 424 1.546923 GGGGTTTTACCGGTTTGGATG 59.453 52.381 15.04 0.00 39.83 3.51
424 425 1.430075 AGGGGTTTTACCGGTTTGGAT 59.570 47.619 15.04 0.00 39.83 3.41
425 426 0.852155 AGGGGTTTTACCGGTTTGGA 59.148 50.000 15.04 0.00 39.83 3.53
426 427 1.614903 GAAGGGGTTTTACCGGTTTGG 59.385 52.381 15.04 0.00 39.83 3.28
427 428 2.308690 TGAAGGGGTTTTACCGGTTTG 58.691 47.619 15.04 0.00 39.83 2.93
428 429 2.752075 TGAAGGGGTTTTACCGGTTT 57.248 45.000 15.04 0.00 39.83 3.27
429 430 2.752075 TTGAAGGGGTTTTACCGGTT 57.248 45.000 15.04 0.00 39.83 4.44
430 431 2.984435 ATTGAAGGGGTTTTACCGGT 57.016 45.000 13.98 13.98 39.83 5.28
431 432 3.158676 TGAATTGAAGGGGTTTTACCGG 58.841 45.455 0.00 0.00 39.83 5.28
432 433 4.552355 GTTGAATTGAAGGGGTTTTACCG 58.448 43.478 0.00 0.00 39.83 4.02
433 434 4.552355 CGTTGAATTGAAGGGGTTTTACC 58.448 43.478 0.00 0.00 37.60 2.85
434 435 4.278919 TCCGTTGAATTGAAGGGGTTTTAC 59.721 41.667 15.05 0.00 32.67 2.01
435 436 4.471548 TCCGTTGAATTGAAGGGGTTTTA 58.528 39.130 15.05 0.00 32.67 1.52
436 437 3.301274 TCCGTTGAATTGAAGGGGTTTT 58.699 40.909 15.05 0.00 32.67 2.43
437 438 2.952116 TCCGTTGAATTGAAGGGGTTT 58.048 42.857 15.05 0.00 32.67 3.27
438 439 2.626266 GTTCCGTTGAATTGAAGGGGTT 59.374 45.455 15.05 0.00 32.67 4.11
439 440 2.235891 GTTCCGTTGAATTGAAGGGGT 58.764 47.619 15.05 0.00 32.67 4.95
440 441 1.544246 GGTTCCGTTGAATTGAAGGGG 59.456 52.381 15.05 2.88 32.67 4.79
441 442 1.544246 GGGTTCCGTTGAATTGAAGGG 59.456 52.381 9.78 9.78 31.98 3.95
442 443 2.235016 TGGGTTCCGTTGAATTGAAGG 58.765 47.619 0.00 0.00 31.98 3.46
443 444 4.048504 GTTTGGGTTCCGTTGAATTGAAG 58.951 43.478 0.00 0.00 31.98 3.02
444 445 3.702045 AGTTTGGGTTCCGTTGAATTGAA 59.298 39.130 0.00 0.00 31.98 2.69
445 446 3.067461 CAGTTTGGGTTCCGTTGAATTGA 59.933 43.478 0.00 0.00 31.98 2.57
446 447 3.067461 TCAGTTTGGGTTCCGTTGAATTG 59.933 43.478 0.00 0.00 31.98 2.32
447 448 3.292460 TCAGTTTGGGTTCCGTTGAATT 58.708 40.909 0.00 0.00 31.98 2.17
448 449 2.938838 TCAGTTTGGGTTCCGTTGAAT 58.061 42.857 0.00 0.00 31.98 2.57
449 450 2.421751 TCAGTTTGGGTTCCGTTGAA 57.578 45.000 0.00 0.00 0.00 2.69
450 451 2.018515 GTTCAGTTTGGGTTCCGTTGA 58.981 47.619 0.00 0.00 0.00 3.18
451 452 1.746220 TGTTCAGTTTGGGTTCCGTTG 59.254 47.619 0.00 0.00 0.00 4.10
452 453 2.131776 TGTTCAGTTTGGGTTCCGTT 57.868 45.000 0.00 0.00 0.00 4.44
453 454 1.953686 CATGTTCAGTTTGGGTTCCGT 59.046 47.619 0.00 0.00 0.00 4.69
454 455 1.335872 GCATGTTCAGTTTGGGTTCCG 60.336 52.381 0.00 0.00 0.00 4.30
455 456 1.000843 GGCATGTTCAGTTTGGGTTCC 59.999 52.381 0.00 0.00 0.00 3.62
456 457 1.335872 CGGCATGTTCAGTTTGGGTTC 60.336 52.381 0.00 0.00 0.00 3.62
457 458 0.673437 CGGCATGTTCAGTTTGGGTT 59.327 50.000 0.00 0.00 0.00 4.11
458 459 0.179004 TCGGCATGTTCAGTTTGGGT 60.179 50.000 0.00 0.00 0.00 4.51
459 460 0.240945 GTCGGCATGTTCAGTTTGGG 59.759 55.000 0.00 0.00 0.00 4.12
460 461 0.110238 CGTCGGCATGTTCAGTTTGG 60.110 55.000 0.00 0.00 0.00 3.28
461 462 0.586319 ACGTCGGCATGTTCAGTTTG 59.414 50.000 0.00 0.00 0.00 2.93
462 463 2.157834 TACGTCGGCATGTTCAGTTT 57.842 45.000 0.00 0.00 0.00 2.66
463 464 1.999735 CATACGTCGGCATGTTCAGTT 59.000 47.619 0.00 0.00 0.00 3.16
464 465 1.640428 CATACGTCGGCATGTTCAGT 58.360 50.000 0.00 0.00 0.00 3.41
465 466 0.930310 CCATACGTCGGCATGTTCAG 59.070 55.000 0.00 0.00 0.00 3.02
466 467 0.248012 ACCATACGTCGGCATGTTCA 59.752 50.000 0.00 0.00 0.00 3.18
467 468 1.365699 AACCATACGTCGGCATGTTC 58.634 50.000 0.00 0.00 0.00 3.18
468 469 1.466950 CAAACCATACGTCGGCATGTT 59.533 47.619 0.00 0.00 0.00 2.71
469 470 1.083489 CAAACCATACGTCGGCATGT 58.917 50.000 0.00 0.00 0.00 3.21
470 471 1.083489 ACAAACCATACGTCGGCATG 58.917 50.000 0.00 0.00 0.00 4.06
471 472 1.083489 CACAAACCATACGTCGGCAT 58.917 50.000 0.00 0.00 0.00 4.40
472 473 0.033642 TCACAAACCATACGTCGGCA 59.966 50.000 0.00 0.00 0.00 5.69
473 474 0.441145 GTCACAAACCATACGTCGGC 59.559 55.000 0.00 0.00 0.00 5.54
474 475 2.074547 AGTCACAAACCATACGTCGG 57.925 50.000 0.00 0.00 0.00 4.79
475 476 6.693978 TGAATATAGTCACAAACCATACGTCG 59.306 38.462 0.00 0.00 0.00 5.12
476 477 7.997107 TGAATATAGTCACAAACCATACGTC 57.003 36.000 0.00 0.00 0.00 4.34
477 478 8.826710 CATTGAATATAGTCACAAACCATACGT 58.173 33.333 1.60 0.00 0.00 3.57
478 479 8.282592 CCATTGAATATAGTCACAAACCATACG 58.717 37.037 1.60 0.00 0.00 3.06
479 480 8.076178 GCCATTGAATATAGTCACAAACCATAC 58.924 37.037 1.60 0.00 0.00 2.39
480 481 7.777440 TGCCATTGAATATAGTCACAAACCATA 59.223 33.333 1.60 0.00 0.00 2.74
481 482 6.606796 TGCCATTGAATATAGTCACAAACCAT 59.393 34.615 1.60 0.00 0.00 3.55
482 483 5.948758 TGCCATTGAATATAGTCACAAACCA 59.051 36.000 1.60 0.00 0.00 3.67
483 484 6.449635 TGCCATTGAATATAGTCACAAACC 57.550 37.500 1.60 0.00 0.00 3.27
484 485 6.919662 CCATGCCATTGAATATAGTCACAAAC 59.080 38.462 1.60 0.00 0.00 2.93
485 486 6.832900 TCCATGCCATTGAATATAGTCACAAA 59.167 34.615 1.60 0.00 0.00 2.83
486 487 6.363882 TCCATGCCATTGAATATAGTCACAA 58.636 36.000 1.60 0.00 0.00 3.33
487 488 5.939447 TCCATGCCATTGAATATAGTCACA 58.061 37.500 1.60 0.00 0.00 3.58
488 489 6.233434 TCTCCATGCCATTGAATATAGTCAC 58.767 40.000 1.60 0.00 0.00 3.67
489 490 6.438186 TCTCCATGCCATTGAATATAGTCA 57.562 37.500 0.00 0.00 0.00 3.41
490 491 6.373774 CCTTCTCCATGCCATTGAATATAGTC 59.626 42.308 0.00 0.00 0.00 2.59
491 492 6.183361 ACCTTCTCCATGCCATTGAATATAGT 60.183 38.462 0.00 0.00 0.00 2.12
492 493 6.243900 ACCTTCTCCATGCCATTGAATATAG 58.756 40.000 0.00 0.00 0.00 1.31
493 494 6.204852 ACCTTCTCCATGCCATTGAATATA 57.795 37.500 0.00 0.00 0.00 0.86
494 495 5.070823 ACCTTCTCCATGCCATTGAATAT 57.929 39.130 0.00 0.00 0.00 1.28
495 496 4.524802 ACCTTCTCCATGCCATTGAATA 57.475 40.909 0.00 0.00 0.00 1.75
496 497 3.393426 ACCTTCTCCATGCCATTGAAT 57.607 42.857 0.00 0.00 0.00 2.57
497 498 2.905415 ACCTTCTCCATGCCATTGAA 57.095 45.000 0.00 0.00 0.00 2.69
498 499 2.726821 GAACCTTCTCCATGCCATTGA 58.273 47.619 0.00 0.00 0.00 2.57
499 500 1.402968 CGAACCTTCTCCATGCCATTG 59.597 52.381 0.00 0.00 0.00 2.82
500 501 1.755179 CGAACCTTCTCCATGCCATT 58.245 50.000 0.00 0.00 0.00 3.16
501 502 0.749454 GCGAACCTTCTCCATGCCAT 60.749 55.000 0.00 0.00 0.00 4.40
502 503 1.377202 GCGAACCTTCTCCATGCCA 60.377 57.895 0.00 0.00 0.00 4.92
503 504 2.115291 GGCGAACCTTCTCCATGCC 61.115 63.158 0.00 0.00 32.39 4.40
504 505 2.115291 GGGCGAACCTTCTCCATGC 61.115 63.158 0.00 0.00 33.76 4.06
505 506 1.452108 GGGGCGAACCTTCTCCATG 60.452 63.158 0.00 0.00 40.03 3.66
506 507 2.998949 GGGGCGAACCTTCTCCAT 59.001 61.111 0.00 0.00 40.03 3.41
507 508 3.702048 CGGGGCGAACCTTCTCCA 61.702 66.667 0.00 0.00 40.03 3.86
518 519 4.878682 GTACTAACGGGCGGGGCG 62.879 72.222 0.00 0.00 0.00 6.13
519 520 1.675720 TTAGTACTAACGGGCGGGGC 61.676 60.000 11.38 0.00 0.00 5.80
520 521 0.823460 TTTAGTACTAACGGGCGGGG 59.177 55.000 14.96 0.00 0.00 5.73
521 522 2.671130 TTTTAGTACTAACGGGCGGG 57.329 50.000 14.96 0.00 0.00 6.13
539 540 6.822170 ACTGAGAAAAGTACTTCCTCGTTTTT 59.178 34.615 22.39 8.43 0.00 1.94
540 541 6.346896 ACTGAGAAAAGTACTTCCTCGTTTT 58.653 36.000 22.39 9.00 0.00 2.43
541 542 5.915175 ACTGAGAAAAGTACTTCCTCGTTT 58.085 37.500 22.39 9.58 0.00 3.60
542 543 5.068723 TGACTGAGAAAAGTACTTCCTCGTT 59.931 40.000 22.39 15.90 0.00 3.85
543 544 4.583489 TGACTGAGAAAAGTACTTCCTCGT 59.417 41.667 22.39 21.61 0.00 4.18
544 545 4.918583 GTGACTGAGAAAAGTACTTCCTCG 59.081 45.833 22.39 19.76 0.00 4.63
545 546 4.918583 CGTGACTGAGAAAAGTACTTCCTC 59.081 45.833 21.73 21.73 0.00 3.71
546 547 4.262079 CCGTGACTGAGAAAAGTACTTCCT 60.262 45.833 8.95 9.25 0.00 3.36
547 548 3.988517 CCGTGACTGAGAAAAGTACTTCC 59.011 47.826 8.95 4.28 0.00 3.46
548 549 3.988517 CCCGTGACTGAGAAAAGTACTTC 59.011 47.826 8.95 0.00 0.00 3.01
549 550 3.802675 GCCCGTGACTGAGAAAAGTACTT 60.803 47.826 1.12 1.12 0.00 2.24
550 551 2.288886 GCCCGTGACTGAGAAAAGTACT 60.289 50.000 0.00 0.00 0.00 2.73
551 552 2.067013 GCCCGTGACTGAGAAAAGTAC 58.933 52.381 0.00 0.00 0.00 2.73
552 553 1.336517 CGCCCGTGACTGAGAAAAGTA 60.337 52.381 0.00 0.00 0.00 2.24
553 554 0.600255 CGCCCGTGACTGAGAAAAGT 60.600 55.000 0.00 0.00 0.00 2.66
554 555 0.319555 TCGCCCGTGACTGAGAAAAG 60.320 55.000 0.00 0.00 0.00 2.27
555 556 0.320374 ATCGCCCGTGACTGAGAAAA 59.680 50.000 0.00 0.00 0.00 2.29
556 557 0.108804 GATCGCCCGTGACTGAGAAA 60.109 55.000 0.00 0.00 0.00 2.52
557 558 1.511305 GATCGCCCGTGACTGAGAA 59.489 57.895 0.00 0.00 0.00 2.87
558 559 2.761195 CGATCGCCCGTGACTGAGA 61.761 63.158 0.26 0.00 0.00 3.27
559 560 2.278206 CGATCGCCCGTGACTGAG 60.278 66.667 0.26 0.00 0.00 3.35
560 561 3.822192 CCGATCGCCCGTGACTGA 61.822 66.667 10.32 0.00 0.00 3.41
561 562 4.873129 CCCGATCGCCCGTGACTG 62.873 72.222 10.32 0.00 0.00 3.51
563 564 4.867599 GTCCCGATCGCCCGTGAC 62.868 72.222 10.32 6.87 30.72 3.67
571 572 2.278596 ATTCGCACGTCCCGATCG 60.279 61.111 8.51 8.51 34.35 3.69
572 573 2.237751 CCATTCGCACGTCCCGATC 61.238 63.158 8.45 0.00 34.35 3.69
573 574 1.669049 TACCATTCGCACGTCCCGAT 61.669 55.000 8.45 0.00 34.35 4.18
574 575 2.274232 CTACCATTCGCACGTCCCGA 62.274 60.000 3.91 3.91 0.00 5.14
575 576 1.876714 CTACCATTCGCACGTCCCG 60.877 63.158 0.00 0.00 0.00 5.14
576 577 0.390735 AACTACCATTCGCACGTCCC 60.391 55.000 0.00 0.00 0.00 4.46
577 578 0.719465 CAACTACCATTCGCACGTCC 59.281 55.000 0.00 0.00 0.00 4.79
578 579 0.094730 GCAACTACCATTCGCACGTC 59.905 55.000 0.00 0.00 0.00 4.34
579 580 0.601576 TGCAACTACCATTCGCACGT 60.602 50.000 0.00 0.00 0.00 4.49
580 581 0.095245 CTGCAACTACCATTCGCACG 59.905 55.000 0.00 0.00 0.00 5.34
581 582 1.438651 TCTGCAACTACCATTCGCAC 58.561 50.000 0.00 0.00 0.00 5.34
582 583 2.177394 TTCTGCAACTACCATTCGCA 57.823 45.000 0.00 0.00 0.00 5.10
583 584 2.724839 CGTTTCTGCAACTACCATTCGC 60.725 50.000 0.00 0.00 32.53 4.70
584 585 2.159707 CCGTTTCTGCAACTACCATTCG 60.160 50.000 0.00 0.00 32.53 3.34
585 586 3.071479 TCCGTTTCTGCAACTACCATTC 58.929 45.455 0.00 0.00 32.53 2.67
586 587 2.812011 GTCCGTTTCTGCAACTACCATT 59.188 45.455 0.00 0.00 32.53 3.16
587 588 2.224426 TGTCCGTTTCTGCAACTACCAT 60.224 45.455 0.00 0.00 32.53 3.55
588 589 1.139256 TGTCCGTTTCTGCAACTACCA 59.861 47.619 0.00 0.00 32.53 3.25
589 590 1.873698 TGTCCGTTTCTGCAACTACC 58.126 50.000 0.00 0.00 32.53 3.18
590 591 2.412847 GCATGTCCGTTTCTGCAACTAC 60.413 50.000 0.00 0.00 34.77 2.73
591 592 1.804151 GCATGTCCGTTTCTGCAACTA 59.196 47.619 0.00 0.00 34.77 2.24
592 593 0.593128 GCATGTCCGTTTCTGCAACT 59.407 50.000 0.00 0.00 34.77 3.16
593 594 0.310543 TGCATGTCCGTTTCTGCAAC 59.689 50.000 0.00 0.00 41.33 4.17
594 595 0.310543 GTGCATGTCCGTTTCTGCAA 59.689 50.000 0.00 0.00 45.34 4.08
595 596 0.534877 AGTGCATGTCCGTTTCTGCA 60.535 50.000 0.00 0.00 41.98 4.41
596 597 0.593128 AAGTGCATGTCCGTTTCTGC 59.407 50.000 0.00 0.00 35.21 4.26
597 598 1.664016 GCAAGTGCATGTCCGTTTCTG 60.664 52.381 0.00 0.00 41.59 3.02
598 599 0.593128 GCAAGTGCATGTCCGTTTCT 59.407 50.000 0.00 0.00 41.59 2.52
599 600 0.593128 AGCAAGTGCATGTCCGTTTC 59.407 50.000 6.00 0.00 45.16 2.78
600 601 1.032014 AAGCAAGTGCATGTCCGTTT 58.968 45.000 6.00 0.00 45.16 3.60
601 602 1.032014 AAAGCAAGTGCATGTCCGTT 58.968 45.000 6.00 0.00 45.16 4.44
602 603 0.311790 CAAAGCAAGTGCATGTCCGT 59.688 50.000 6.00 0.00 45.16 4.69
603 604 1.005294 GCAAAGCAAGTGCATGTCCG 61.005 55.000 6.00 0.00 45.16 4.79
604 605 0.668401 GGCAAAGCAAGTGCATGTCC 60.668 55.000 6.00 6.47 44.07 4.02
605 606 0.032403 TGGCAAAGCAAGTGCATGTC 59.968 50.000 6.00 6.42 44.07 3.06
606 607 0.032952 CTGGCAAAGCAAGTGCATGT 59.967 50.000 6.00 0.00 44.07 3.21
607 608 0.032952 ACTGGCAAAGCAAGTGCATG 59.967 50.000 6.00 5.48 41.81 4.06
608 609 0.316204 GACTGGCAAAGCAAGTGCAT 59.684 50.000 3.34 0.00 43.63 3.96
609 610 1.735360 GACTGGCAAAGCAAGTGCA 59.265 52.632 3.34 0.00 43.63 4.57
610 611 1.370900 CGACTGGCAAAGCAAGTGC 60.371 57.895 3.34 0.00 43.63 4.40
611 612 1.370900 GCGACTGGCAAAGCAAGTG 60.371 57.895 3.34 0.00 43.63 3.16
612 613 2.555547 GGCGACTGGCAAAGCAAGT 61.556 57.895 0.00 0.00 46.61 3.16
613 614 2.256461 GGCGACTGGCAAAGCAAG 59.744 61.111 10.00 0.00 46.16 4.01
621 622 4.760047 ACGACCATGGCGACTGGC 62.760 66.667 27.68 0.00 37.27 4.85
622 623 2.509336 GACGACCATGGCGACTGG 60.509 66.667 27.68 7.87 39.80 4.00
623 624 2.880879 CGACGACCATGGCGACTG 60.881 66.667 27.68 16.60 0.00 3.51
624 625 3.338126 GACGACGACCATGGCGACT 62.338 63.158 27.68 12.00 0.00 4.18
625 626 2.879462 GACGACGACCATGGCGAC 60.879 66.667 27.68 21.85 0.00 5.19
626 627 4.470170 CGACGACGACCATGGCGA 62.470 66.667 27.68 0.00 42.66 5.54
627 628 4.470170 TCGACGACGACCATGGCG 62.470 66.667 21.83 21.83 43.81 5.69
1134 1144 2.352805 GCCAGGTACTTGCTGCCT 59.647 61.111 0.00 0.00 44.36 4.75
1431 1456 4.471078 TGTGCTCTCCCAGTACCTATAT 57.529 45.455 0.00 0.00 36.92 0.86
1716 1747 1.134560 GTCTGGTACCGGAAGCTACAG 59.865 57.143 25.28 4.34 32.55 2.74
1719 1750 2.892025 GGTCTGGTACCGGAAGCTA 58.108 57.895 25.28 0.00 38.88 3.32
1957 1997 2.410466 TTGGTCCGTTGCCAAAGTC 58.590 52.632 0.00 0.00 42.39 3.01
2056 2097 8.893563 TTATCATGGTATCTTTCAGGGTTTTT 57.106 30.769 0.00 0.00 0.00 1.94
2057 2098 8.893563 TTTATCATGGTATCTTTCAGGGTTTT 57.106 30.769 0.00 0.00 0.00 2.43
2058 2099 8.749354 GTTTTATCATGGTATCTTTCAGGGTTT 58.251 33.333 0.00 0.00 0.00 3.27
2059 2100 7.342026 GGTTTTATCATGGTATCTTTCAGGGTT 59.658 37.037 0.00 0.00 0.00 4.11
2060 2101 6.833933 GGTTTTATCATGGTATCTTTCAGGGT 59.166 38.462 0.00 0.00 0.00 4.34
2061 2102 6.017109 CGGTTTTATCATGGTATCTTTCAGGG 60.017 42.308 0.00 0.00 0.00 4.45
2062 2103 6.513393 GCGGTTTTATCATGGTATCTTTCAGG 60.513 42.308 0.00 0.00 0.00 3.86
2063 2104 6.038161 TGCGGTTTTATCATGGTATCTTTCAG 59.962 38.462 0.00 0.00 0.00 3.02
2064 2105 5.883115 TGCGGTTTTATCATGGTATCTTTCA 59.117 36.000 0.00 0.00 0.00 2.69
2065 2106 6.371809 TGCGGTTTTATCATGGTATCTTTC 57.628 37.500 0.00 0.00 0.00 2.62
2066 2107 6.959639 ATGCGGTTTTATCATGGTATCTTT 57.040 33.333 0.00 0.00 0.00 2.52
2067 2108 6.959639 AATGCGGTTTTATCATGGTATCTT 57.040 33.333 0.00 0.00 0.00 2.40
2068 2109 6.959639 AAATGCGGTTTTATCATGGTATCT 57.040 33.333 0.00 0.00 0.00 1.98
2069 2110 9.691362 AAATAAATGCGGTTTTATCATGGTATC 57.309 29.630 0.00 0.00 32.05 2.24
2070 2111 9.474920 CAAATAAATGCGGTTTTATCATGGTAT 57.525 29.630 0.00 0.00 32.05 2.73
2071 2112 8.470805 ACAAATAAATGCGGTTTTATCATGGTA 58.529 29.630 0.00 0.00 32.05 3.25
2072 2113 7.277539 CACAAATAAATGCGGTTTTATCATGGT 59.722 33.333 0.00 0.00 32.05 3.55
2073 2114 7.277539 ACACAAATAAATGCGGTTTTATCATGG 59.722 33.333 0.00 0.00 32.05 3.66
2074 2115 8.109391 CACACAAATAAATGCGGTTTTATCATG 58.891 33.333 0.00 0.00 32.05 3.07
2075 2116 7.816995 ACACACAAATAAATGCGGTTTTATCAT 59.183 29.630 1.14 0.00 32.05 2.45
2076 2117 7.148641 ACACACAAATAAATGCGGTTTTATCA 58.851 30.769 1.14 0.00 32.05 2.15
2077 2118 7.575332 ACACACAAATAAATGCGGTTTTATC 57.425 32.000 1.14 0.00 32.05 1.75
2078 2119 8.301002 AGTACACACAAATAAATGCGGTTTTAT 58.699 29.630 0.00 0.00 34.11 1.40
2079 2120 7.649973 AGTACACACAAATAAATGCGGTTTTA 58.350 30.769 0.00 0.00 0.00 1.52
2083 2124 5.699097 AAGTACACACAAATAAATGCGGT 57.301 34.783 0.00 0.00 0.00 5.68
2199 2243 4.219944 TCTCTAGGCGCTCTAACTTGAAAA 59.780 41.667 7.64 0.00 0.00 2.29
2377 2793 6.712547 GGCAGTAGAATAATAAGAACCATGCT 59.287 38.462 0.00 0.00 0.00 3.79
2397 2813 1.302832 GGCAGCTACAACAGGCAGT 60.303 57.895 0.00 0.00 0.00 4.40
2404 2820 3.506067 ACAAGGTTTATGGCAGCTACAAC 59.494 43.478 0.00 0.00 0.00 3.32
2506 2937 4.277423 GTCCTTTGAAATCTTTCCCGTTGA 59.723 41.667 0.48 0.00 36.36 3.18
2533 2964 4.808364 ACGAGTACATAGTCTAGGTCGTTC 59.192 45.833 0.00 0.00 0.00 3.95
2618 3058 6.034044 GTCAATCAACATCGAGTCTACACTTC 59.966 42.308 0.00 0.00 30.63 3.01
2838 3281 4.416620 AGCTCTTCGATAGTCTTTTCACG 58.583 43.478 0.00 0.00 37.40 4.35
2844 3287 4.218635 TGTGTTGAGCTCTTCGATAGTCTT 59.781 41.667 16.19 0.00 37.40 3.01
3128 3572 5.711976 CCCAATCCAGTTCTACATGTTTCTT 59.288 40.000 2.30 0.00 0.00 2.52
3226 3670 1.338200 GCTTTGAGATCACGGTGGACT 60.338 52.381 8.50 7.89 0.00 3.85
3247 3691 6.942532 TCTTTGTCAAGTAAGATGTTGCTT 57.057 33.333 0.00 0.00 38.99 3.91
3259 3703 6.486657 TCTTCGGATTCATTTCTTTGTCAAGT 59.513 34.615 0.00 0.00 0.00 3.16
3388 3832 4.789012 AAGCAACATACCACTTGGATTG 57.211 40.909 1.14 1.72 38.94 2.67
3532 3976 4.756642 GTCACAATCTCAAGAACCATGACA 59.243 41.667 0.00 0.00 35.22 3.58
3607 4051 5.334491 CGAACAACAAGCACATACCACATTA 60.334 40.000 0.00 0.00 0.00 1.90
3703 4149 6.625532 ATGAAATGGGTAAATCTTTGCCTT 57.374 33.333 9.25 0.00 41.88 4.35
3717 4163 9.129532 AGCTCTCTTCTTAATTAATGAAATGGG 57.870 33.333 0.00 2.94 0.00 4.00
3836 4282 1.076549 ACCGTTGTGGCCATCCAAT 59.923 52.632 9.72 0.00 45.53 3.16
3873 4319 2.089980 GAGAAGCTGGTGTTCATGCAT 58.910 47.619 0.00 0.00 0.00 3.96
3904 4350 4.597075 TCCTATATGGATGCACCTTAGCAA 59.403 41.667 0.00 0.00 39.93 3.91
3927 4373 5.621329 CGGGTTTTCTTGAACACAAAGAAGT 60.621 40.000 2.71 0.00 32.42 3.01
3933 4379 1.135333 GCCGGGTTTTCTTGAACACAA 59.865 47.619 2.18 0.00 32.42 3.33
4014 4460 4.956932 GCCGGCTTAGATGGGGCC 62.957 72.222 22.15 0.00 42.18 5.80
4048 4494 2.346803 GATGCCAAAGTTGTCGCTAGA 58.653 47.619 0.00 0.00 0.00 2.43
4081 4527 7.036996 TCAACTCAAGAACATGTTAATTGCA 57.963 32.000 22.42 14.36 0.00 4.08
4127 5022 0.110373 GCCCGTGTTAAAACTGCTCG 60.110 55.000 0.00 0.00 0.00 5.03
4444 5964 1.416401 TCGGGCTTCTGTCTTTTCTGT 59.584 47.619 0.00 0.00 0.00 3.41
4445 5965 1.801178 GTCGGGCTTCTGTCTTTTCTG 59.199 52.381 0.00 0.00 0.00 3.02
4446 5966 1.694696 AGTCGGGCTTCTGTCTTTTCT 59.305 47.619 0.00 0.00 0.00 2.52
4447 5967 2.171341 AGTCGGGCTTCTGTCTTTTC 57.829 50.000 0.00 0.00 0.00 2.29
4453 5974 8.044908 TCTTTATTTATAAAGTCGGGCTTCTGT 58.955 33.333 17.36 0.00 45.80 3.41
4457 5978 8.747538 ATGTCTTTATTTATAAAGTCGGGCTT 57.252 30.769 17.36 0.00 45.80 4.35
4483 6004 4.019174 ACCTTATTCTGAACCTTGCCATG 58.981 43.478 0.00 0.00 0.00 3.66
4500 6021 3.420893 CATGCCTTCCTGTTGAACCTTA 58.579 45.455 0.00 0.00 0.00 2.69
4521 6042 2.164422 GCTTGTTTGCCCTGAACTATCC 59.836 50.000 0.00 0.00 0.00 2.59
4585 6111 7.168302 CCGCAAAGTTTATGTGTTTATTGTCAA 59.832 33.333 0.00 0.00 0.00 3.18
4589 6115 5.442649 CGCCGCAAAGTTTATGTGTTTATTG 60.443 40.000 0.00 0.00 0.00 1.90
4629 6155 6.338146 CACTATCACCGTATATACCCCATTG 58.662 44.000 7.30 0.00 0.00 2.82
4630 6156 5.424252 CCACTATCACCGTATATACCCCATT 59.576 44.000 7.30 0.00 0.00 3.16
4636 6162 4.201891 CGCCTCCACTATCACCGTATATAC 60.202 50.000 2.53 2.53 0.00 1.47
4643 6443 2.279517 GCGCCTCCACTATCACCG 60.280 66.667 0.00 0.00 0.00 4.94
4674 6474 5.163530 GGATGTTGATGGTGTTGCATTGATA 60.164 40.000 0.00 0.00 0.00 2.15
4716 6516 3.674997 TGTCTTTATTCAGCAGTGGACC 58.325 45.455 0.00 0.00 0.00 4.46
4717 6517 4.083271 GGTTGTCTTTATTCAGCAGTGGAC 60.083 45.833 0.00 0.00 0.00 4.02
4724 6524 9.255304 TGTTTAAAATGGTTGTCTTTATTCAGC 57.745 29.630 0.00 0.00 0.00 4.26
4790 6590 5.345741 TGCGGACTACTCGTAACAAATTTAC 59.654 40.000 0.00 0.00 0.00 2.01
4812 6612 2.287849 GCTTCTCTTGGGTTGTCTTTGC 60.288 50.000 0.00 0.00 0.00 3.68
4839 6639 4.202315 GGTTTGCTAGGGTGTTTTGGAATT 60.202 41.667 0.00 0.00 0.00 2.17
4849 6649 0.331278 TGGGATGGTTTGCTAGGGTG 59.669 55.000 0.00 0.00 0.00 4.61
4862 6662 4.202441 CATCCTTGAAAGTACCTGGGATG 58.798 47.826 0.00 0.00 41.40 3.51
4868 6668 1.739067 GCGCATCCTTGAAAGTACCT 58.261 50.000 0.30 0.00 0.00 3.08
4873 6673 2.764314 CCCCGCGCATCCTTGAAAG 61.764 63.158 8.75 0.00 0.00 2.62
4897 6697 3.732849 GCCCACTTCCCCTCCCTG 61.733 72.222 0.00 0.00 0.00 4.45
4898 6698 3.952799 GAGCCCACTTCCCCTCCCT 62.953 68.421 0.00 0.00 0.00 4.20
4901 6701 3.787001 CGGAGCCCACTTCCCCTC 61.787 72.222 0.00 0.00 0.00 4.30
4910 6710 4.020617 CTGTCAAGCCGGAGCCCA 62.021 66.667 5.05 0.00 41.25 5.36
4957 6757 0.037232 CTCCTCCACGTCCAAAGTCC 60.037 60.000 0.00 0.00 0.00 3.85
4961 6761 2.154798 CTCGCTCCTCCACGTCCAAA 62.155 60.000 0.00 0.00 0.00 3.28
4962 6762 2.599281 TCGCTCCTCCACGTCCAA 60.599 61.111 0.00 0.00 0.00 3.53
4977 6777 2.653448 CTGATGCTCCGTCGCTCG 60.653 66.667 0.00 0.00 39.52 5.03
4997 6797 1.336440 CTAGTCACGAGGAGCAGATGG 59.664 57.143 0.00 0.00 0.00 3.51
5009 6809 3.058224 TGCGATGATGGATACTAGTCACG 60.058 47.826 0.00 0.00 37.61 4.35
5012 6812 6.196079 TGTATGCGATGATGGATACTAGTC 57.804 41.667 0.00 0.00 41.92 2.59
5046 6846 0.813821 CGCAGACACTCATCCTCTCA 59.186 55.000 0.00 0.00 0.00 3.27
5054 6854 4.662961 CACCGCCGCAGACACTCA 62.663 66.667 0.00 0.00 0.00 3.41
5058 6858 4.662961 CAGTCACCGCCGCAGACA 62.663 66.667 9.29 0.00 34.80 3.41
5070 6870 4.961511 GTGTCGCCGCACCAGTCA 62.962 66.667 1.06 0.00 33.53 3.41
5113 6913 1.658717 CATCATCTCGTCCGGCGAC 60.659 63.158 9.30 3.71 45.68 5.19
5130 6930 2.990977 TCCGCAAAGGAGGAGATCA 58.009 52.632 0.00 0.00 45.98 2.92
5160 6960 0.179205 GACACCGTCTTACTCGTCGG 60.179 60.000 0.00 0.00 46.98 4.79
5161 6961 0.517946 CGACACCGTCTTACTCGTCG 60.518 60.000 0.00 0.00 40.04 5.12
5164 6964 1.513586 GGCGACACCGTCTTACTCG 60.514 63.158 0.00 0.00 37.44 4.18
5204 7004 4.760047 CTTGGGCCTCGACACCGG 62.760 72.222 4.53 0.00 36.24 5.28
5224 7024 5.808366 AAGTACTCTCCAGTGATGAACAA 57.192 39.130 0.00 0.00 33.62 2.83
5228 7028 4.021104 CCACAAAGTACTCTCCAGTGATGA 60.021 45.833 0.00 0.00 33.62 2.92
5234 7034 2.352814 CCGTCCACAAAGTACTCTCCAG 60.353 54.545 0.00 0.00 0.00 3.86
5235 7035 1.616865 CCGTCCACAAAGTACTCTCCA 59.383 52.381 0.00 0.00 0.00 3.86
5237 7037 1.711206 GCCGTCCACAAAGTACTCTC 58.289 55.000 0.00 0.00 0.00 3.20
5238 7038 0.038526 CGCCGTCCACAAAGTACTCT 60.039 55.000 0.00 0.00 0.00 3.24
5251 7051 4.719369 AGTCTGTTCGGCGCCGTC 62.719 66.667 44.16 35.40 40.74 4.79
5255 7055 1.206831 GGAAAAGTCTGTTCGGCGC 59.793 57.895 0.00 0.00 0.00 6.53
5257 7057 2.095718 GTGATGGAAAAGTCTGTTCGGC 60.096 50.000 0.00 0.00 0.00 5.54
5258 7058 3.187227 CAGTGATGGAAAAGTCTGTTCGG 59.813 47.826 0.00 0.00 0.00 4.30
5262 7062 3.648067 TCTCCAGTGATGGAAAAGTCTGT 59.352 43.478 0.00 0.00 37.55 3.41
5266 7066 4.141390 ACAAGTCTCCAGTGATGGAAAAGT 60.141 41.667 0.00 0.00 37.55 2.66
5267 7067 4.392940 ACAAGTCTCCAGTGATGGAAAAG 58.607 43.478 0.00 0.00 37.55 2.27
5268 7068 4.103153 AGACAAGTCTCCAGTGATGGAAAA 59.897 41.667 0.00 0.00 37.55 2.29
5269 7069 3.648067 AGACAAGTCTCCAGTGATGGAAA 59.352 43.478 0.00 0.00 37.55 3.13
5276 7076 3.446873 AGCAGATAGACAAGTCTCCAGTG 59.553 47.826 5.91 2.34 40.93 3.66
5277 7077 3.707316 AGCAGATAGACAAGTCTCCAGT 58.293 45.455 5.91 0.00 40.93 4.00
5281 7081 7.010923 CCACATTAAAGCAGATAGACAAGTCTC 59.989 40.741 5.91 0.00 40.93 3.36
5282 7082 6.820656 CCACATTAAAGCAGATAGACAAGTCT 59.179 38.462 7.96 7.96 43.40 3.24
5284 7084 5.355350 GCCACATTAAAGCAGATAGACAAGT 59.645 40.000 0.00 0.00 0.00 3.16
5287 7087 3.871006 CGCCACATTAAAGCAGATAGACA 59.129 43.478 0.00 0.00 0.00 3.41
5289 7089 2.872245 GCGCCACATTAAAGCAGATAGA 59.128 45.455 0.00 0.00 0.00 1.98
5291 7091 2.637947 TGCGCCACATTAAAGCAGATA 58.362 42.857 4.18 0.00 33.57 1.98
5292 7092 1.462616 TGCGCCACATTAAAGCAGAT 58.537 45.000 4.18 0.00 33.57 2.90
5293 7093 1.068610 GTTGCGCCACATTAAAGCAGA 60.069 47.619 4.18 0.00 39.11 4.26
5295 7095 0.386605 CGTTGCGCCACATTAAAGCA 60.387 50.000 12.54 0.00 35.90 3.91
5319 7135 1.141053 AGCGTCCTGAGAAACCAACTT 59.859 47.619 0.00 0.00 0.00 2.66
5363 7179 2.125912 CAGACGCAACCTCTCGGG 60.126 66.667 0.00 0.00 41.89 5.14
5373 7189 1.276138 AGGATGACATTGACAGACGCA 59.724 47.619 0.00 0.00 0.00 5.24
5384 7200 0.970937 ACCGGACGTGAGGATGACAT 60.971 55.000 9.46 0.00 0.00 3.06
5387 7203 1.303806 TGACCGGACGTGAGGATGA 60.304 57.895 9.46 0.00 0.00 2.92
5431 7247 1.593750 GCCGGTCTAGAGCATGCAG 60.594 63.158 21.98 8.96 0.00 4.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.