Multiple sequence alignment - TraesCS1B01G453500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G453500 chr1B 100.000 2270 0 0 1 2270 669750414 669752683 0.000000e+00 4193.0
1 TraesCS1B01G453500 chr1B 92.500 80 3 1 300 376 669750632 669750711 6.630000e-21 111.0
2 TraesCS1B01G453500 chr1B 92.500 80 3 1 219 298 669750713 669750789 6.630000e-21 111.0
3 TraesCS1B01G453500 chr1D 87.691 1113 65 31 800 1871 481381480 481382561 0.000000e+00 1230.0
4 TraesCS1B01G453500 chr1D 95.979 572 20 1 1 572 481379614 481380182 0.000000e+00 926.0
5 TraesCS1B01G453500 chr1D 85.915 213 23 5 564 773 481381163 481381371 1.060000e-53 220.0
6 TraesCS1B01G453500 chr1D 95.000 80 1 1 219 298 481379910 481379986 3.060000e-24 122.0
7 TraesCS1B01G453500 chr1D 94.805 77 4 0 300 376 481379832 481379908 1.100000e-23 121.0
8 TraesCS1B01G453500 chr1A 87.393 1047 41 29 800 1808 577837939 577838932 0.000000e+00 1118.0
9 TraesCS1B01G453500 chr1A 87.138 311 32 6 328 633 577837464 577837771 1.670000e-91 346.0
10 TraesCS1B01G453500 chr1A 94.505 182 9 1 1 182 577836925 577837105 1.720000e-71 279.0
11 TraesCS1B01G453500 chr1A 95.000 100 3 2 674 773 577837766 577837863 3.020000e-34 156.0
12 TraesCS1B01G453500 chr3D 85.714 77 5 5 1418 1490 39415283 39415357 2.420000e-10 76.8
13 TraesCS1B01G453500 chr2D 100.000 40 0 0 1418 1457 634528509 634528548 8.700000e-10 75.0
14 TraesCS1B01G453500 chr7D 97.500 40 1 0 1418 1457 632967496 632967535 4.050000e-08 69.4
15 TraesCS1B01G453500 chr5B 97.500 40 1 0 1418 1457 515694497 515694536 4.050000e-08 69.4
16 TraesCS1B01G453500 chr6D 100.000 33 0 0 1425 1457 249348025 249348057 6.770000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G453500 chr1B 669750414 669752683 2269 False 1471.666667 4193 95.000 1 2270 3 chr1B.!!$F1 2269
1 TraesCS1B01G453500 chr1D 481379614 481382561 2947 False 523.800000 1230 91.878 1 1871 5 chr1D.!!$F1 1870
2 TraesCS1B01G453500 chr1A 577836925 577838932 2007 False 474.750000 1118 91.009 1 1808 4 chr1A.!!$F1 1807

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
794 2142 0.313987 CTTCAAACACTTTCCGGCCC 59.686 55.0 0.0 0.0 0.0 5.8 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2236 3651 0.032403 ACGCACGTGGCTAACTGTAA 59.968 50.0 18.88 0.0 41.67 2.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 4.202441 AGATGATGGTGATTCTTTTCCGG 58.798 43.478 0.00 0.00 0.00 5.14
121 122 5.936686 AAATGAGATATGTGATCTTGCCG 57.063 39.130 0.00 0.00 0.00 5.69
242 518 8.710551 ACATTTGCAAAATATATGTGTGTTGTG 58.289 29.630 17.19 6.36 0.00 3.33
243 519 8.710551 CATTTGCAAAATATATGTGTGTTGTGT 58.289 29.630 17.19 0.00 0.00 3.72
244 520 9.920133 ATTTGCAAAATATATGTGTGTTGTGTA 57.080 25.926 17.19 0.00 0.00 2.90
326 618 8.962857 TTGCAAAATATATGTGTGTTGTGTAG 57.037 30.769 0.00 0.00 0.00 2.74
347 639 6.761242 TGTAGTATTAATGTGCATGGTGAGAC 59.239 38.462 0.00 0.00 0.00 3.36
555 850 2.415090 CCTTTGCAATCAAGAGAAGCGG 60.415 50.000 0.00 0.00 33.19 5.52
557 852 1.159285 TGCAATCAAGAGAAGCGGTG 58.841 50.000 0.00 0.00 33.19 4.94
579 1863 2.930826 AAGAGGTTGGTCAACGATGT 57.069 45.000 7.62 0.00 42.02 3.06
598 1882 4.919774 TGTCATTATACAACACCTGGGT 57.080 40.909 0.00 0.00 0.00 4.51
612 1896 2.191400 CCTGGGTGAGGAAGAAGATGA 58.809 52.381 0.00 0.00 46.33 2.92
614 1898 2.568956 CTGGGTGAGGAAGAAGATGACA 59.431 50.000 0.00 0.00 0.00 3.58
615 1899 2.303022 TGGGTGAGGAAGAAGATGACAC 59.697 50.000 0.00 0.00 0.00 3.67
617 1901 3.769844 GGGTGAGGAAGAAGATGACACTA 59.230 47.826 0.00 0.00 0.00 2.74
618 1902 4.407296 GGGTGAGGAAGAAGATGACACTAT 59.593 45.833 0.00 0.00 0.00 2.12
619 1903 5.104735 GGGTGAGGAAGAAGATGACACTATT 60.105 44.000 0.00 0.00 0.00 1.73
655 1941 4.464069 AAAAACTCATCCTCTCTCTCCG 57.536 45.455 0.00 0.00 0.00 4.63
665 1951 2.093235 CCTCTCTCTCCGGCATTTTCTT 60.093 50.000 0.00 0.00 0.00 2.52
666 1952 2.935201 CTCTCTCTCCGGCATTTTCTTG 59.065 50.000 0.00 0.00 0.00 3.02
672 1958 1.745087 TCCGGCATTTTCTTGAGCATC 59.255 47.619 0.00 0.00 0.00 3.91
680 1966 5.506982 GCATTTTCTTGAGCATCCTATGACC 60.507 44.000 0.00 0.00 0.00 4.02
773 2121 9.747898 ATCAAACACTGGGTATATTACTCAAAA 57.252 29.630 0.00 0.00 38.99 2.44
789 2137 9.750125 ATTACTCAAAATCTTCAAACACTTTCC 57.250 29.630 0.00 0.00 0.00 3.13
791 2139 5.587289 TCAAAATCTTCAAACACTTTCCGG 58.413 37.500 0.00 0.00 0.00 5.14
792 2140 3.643159 AATCTTCAAACACTTTCCGGC 57.357 42.857 0.00 0.00 0.00 6.13
793 2141 1.314730 TCTTCAAACACTTTCCGGCC 58.685 50.000 0.00 0.00 0.00 6.13
794 2142 0.313987 CTTCAAACACTTTCCGGCCC 59.686 55.000 0.00 0.00 0.00 5.80
796 2144 1.104577 TCAAACACTTTCCGGCCCAC 61.105 55.000 0.00 0.00 0.00 4.61
798 2146 2.897172 AAACACTTTCCGGCCCACGT 62.897 55.000 0.00 0.00 42.24 4.49
881 2248 4.313282 GGCGATATCAGGTAGGGTTTTAC 58.687 47.826 3.12 0.00 0.00 2.01
963 2330 2.825982 CGACTCCACCACCACCAA 59.174 61.111 0.00 0.00 0.00 3.67
1197 2564 1.523938 GCACTACGGCTTCATCCCC 60.524 63.158 0.00 0.00 0.00 4.81
1206 2573 1.048601 GCTTCATCCCCCTCGTCATA 58.951 55.000 0.00 0.00 0.00 2.15
1282 2649 2.507854 TTCTGATCGATCCCCGCCC 61.508 63.158 22.31 0.00 38.37 6.13
1344 2732 5.653330 TCCGTGGTAGTTAGTTATGTCATCA 59.347 40.000 0.00 0.00 0.00 3.07
1345 2733 6.322969 TCCGTGGTAGTTAGTTATGTCATCAT 59.677 38.462 0.00 0.00 38.00 2.45
1346 2734 6.641314 CCGTGGTAGTTAGTTATGTCATCATC 59.359 42.308 0.00 0.00 35.70 2.92
1377 2765 3.126073 TGCTAGAATTATCTGTGCTGCG 58.874 45.455 0.00 0.00 37.37 5.18
1475 2863 5.125900 GGTGATGTTTGGATGATGTGATTGA 59.874 40.000 0.00 0.00 0.00 2.57
1480 2868 8.700439 ATGTTTGGATGATGTGATTGATGATA 57.300 30.769 0.00 0.00 0.00 2.15
1510 2898 3.624777 GATTCTGGATTGTGATGTGGGT 58.375 45.455 0.00 0.00 0.00 4.51
1531 2919 2.046023 TGGATCTTGGTGGCTGCG 60.046 61.111 0.00 0.00 0.00 5.18
1569 2958 0.179067 TCCTTTTTGCGTCCTCGTGT 60.179 50.000 0.00 0.00 39.49 4.49
1640 3031 2.723322 TCAGGCAAATCATCAGAGGG 57.277 50.000 0.00 0.00 0.00 4.30
1644 3035 0.743097 GCAAATCATCAGAGGGGTGC 59.257 55.000 0.00 0.00 0.00 5.01
1645 3036 1.396653 CAAATCATCAGAGGGGTGCC 58.603 55.000 0.00 0.00 0.00 5.01
1676 3067 0.032678 ATGCCTCTCGGTAATCGCTG 59.967 55.000 0.00 0.00 39.05 5.18
1678 3069 0.595310 GCCTCTCGGTAATCGCTGTC 60.595 60.000 0.00 0.00 39.05 3.51
1679 3070 1.025812 CCTCTCGGTAATCGCTGTCT 58.974 55.000 0.00 0.00 39.05 3.41
1680 3071 1.002251 CCTCTCGGTAATCGCTGTCTC 60.002 57.143 0.00 0.00 39.05 3.36
1683 3074 1.402259 CTCGGTAATCGCTGTCTCTGT 59.598 52.381 0.00 0.00 39.05 3.41
1684 3075 1.816835 TCGGTAATCGCTGTCTCTGTT 59.183 47.619 0.00 0.00 39.05 3.16
1685 3076 2.230508 TCGGTAATCGCTGTCTCTGTTT 59.769 45.455 0.00 0.00 39.05 2.83
1729 3134 0.675083 TGGGCATGCTTCTGTTGTTG 59.325 50.000 18.92 0.00 0.00 3.33
1730 3135 0.037975 GGGCATGCTTCTGTTGTTGG 60.038 55.000 18.92 0.00 0.00 3.77
1731 3136 0.668401 GGCATGCTTCTGTTGTTGGC 60.668 55.000 18.92 0.00 0.00 4.52
1741 3146 1.342174 CTGTTGTTGGCCTTGCATCTT 59.658 47.619 3.32 0.00 0.00 2.40
1746 3151 2.036217 TGTTGGCCTTGCATCTTTTCAG 59.964 45.455 3.32 0.00 0.00 3.02
1770 3175 1.215673 TGGGCTCACAGTGGGTAAAAA 59.784 47.619 1.37 0.00 0.00 1.94
1835 3249 6.695713 CACATATCTTGCATTGTTCATCCAAG 59.304 38.462 0.00 0.00 35.44 3.61
1837 3251 5.733620 ATCTTGCATTGTTCATCCAAGTT 57.266 34.783 0.00 0.00 35.58 2.66
1839 3253 3.663995 TGCATTGTTCATCCAAGTTGG 57.336 42.857 16.36 16.36 39.43 3.77
1842 3256 4.022416 TGCATTGTTCATCCAAGTTGGTAC 60.022 41.667 21.35 14.74 39.03 3.34
1843 3257 4.722194 CATTGTTCATCCAAGTTGGTACG 58.278 43.478 21.35 11.04 39.03 3.67
1850 3264 5.653507 TCATCCAAGTTGGTACGTGTATAC 58.346 41.667 21.35 0.00 39.03 1.47
1861 3276 1.134788 ACGTGTATACCCTGAGCTTGC 60.135 52.381 0.00 0.00 0.00 4.01
1862 3277 1.137086 CGTGTATACCCTGAGCTTGCT 59.863 52.381 0.00 0.00 0.00 3.91
1863 3278 2.418746 CGTGTATACCCTGAGCTTGCTT 60.419 50.000 0.00 0.00 0.00 3.91
1871 3286 3.084039 CCCTGAGCTTGCTTTTATGTGA 58.916 45.455 0.00 0.00 0.00 3.58
1872 3287 3.698040 CCCTGAGCTTGCTTTTATGTGAT 59.302 43.478 0.00 0.00 0.00 3.06
1873 3288 4.201990 CCCTGAGCTTGCTTTTATGTGATC 60.202 45.833 0.00 0.00 0.00 2.92
1874 3289 4.639310 CCTGAGCTTGCTTTTATGTGATCT 59.361 41.667 0.00 0.00 0.00 2.75
1875 3290 5.125097 CCTGAGCTTGCTTTTATGTGATCTT 59.875 40.000 0.00 0.00 0.00 2.40
1876 3291 6.349944 CCTGAGCTTGCTTTTATGTGATCTTT 60.350 38.462 0.00 0.00 0.00 2.52
1877 3292 6.384224 TGAGCTTGCTTTTATGTGATCTTTG 58.616 36.000 0.00 0.00 0.00 2.77
1878 3293 6.016024 TGAGCTTGCTTTTATGTGATCTTTGT 60.016 34.615 0.00 0.00 0.00 2.83
1879 3294 6.752168 AGCTTGCTTTTATGTGATCTTTGTT 58.248 32.000 0.00 0.00 0.00 2.83
1880 3295 7.885297 AGCTTGCTTTTATGTGATCTTTGTTA 58.115 30.769 0.00 0.00 0.00 2.41
1881 3296 8.526147 AGCTTGCTTTTATGTGATCTTTGTTAT 58.474 29.630 0.00 0.00 0.00 1.89
1882 3297 8.801913 GCTTGCTTTTATGTGATCTTTGTTATC 58.198 33.333 0.00 0.00 0.00 1.75
1883 3298 8.894409 TTGCTTTTATGTGATCTTTGTTATCG 57.106 30.769 0.00 0.00 0.00 2.92
1884 3299 8.039603 TGCTTTTATGTGATCTTTGTTATCGT 57.960 30.769 0.00 0.00 0.00 3.73
1885 3300 8.175069 TGCTTTTATGTGATCTTTGTTATCGTC 58.825 33.333 0.00 0.00 0.00 4.20
1886 3301 7.370836 GCTTTTATGTGATCTTTGTTATCGTCG 59.629 37.037 0.00 0.00 0.00 5.12
1887 3302 4.778842 ATGTGATCTTTGTTATCGTCGC 57.221 40.909 0.00 0.00 0.00 5.19
1888 3303 2.927477 TGTGATCTTTGTTATCGTCGCC 59.073 45.455 0.00 0.00 0.00 5.54
1889 3304 2.284417 GTGATCTTTGTTATCGTCGCCC 59.716 50.000 0.00 0.00 0.00 6.13
1890 3305 1.865340 GATCTTTGTTATCGTCGCCCC 59.135 52.381 0.00 0.00 0.00 5.80
1891 3306 0.899720 TCTTTGTTATCGTCGCCCCT 59.100 50.000 0.00 0.00 0.00 4.79
1892 3307 1.134907 TCTTTGTTATCGTCGCCCCTC 60.135 52.381 0.00 0.00 0.00 4.30
1893 3308 0.899720 TTTGTTATCGTCGCCCCTCT 59.100 50.000 0.00 0.00 0.00 3.69
1894 3309 0.899720 TTGTTATCGTCGCCCCTCTT 59.100 50.000 0.00 0.00 0.00 2.85
1895 3310 0.899720 TGTTATCGTCGCCCCTCTTT 59.100 50.000 0.00 0.00 0.00 2.52
1896 3311 1.134907 TGTTATCGTCGCCCCTCTTTC 60.135 52.381 0.00 0.00 0.00 2.62
1897 3312 1.134907 GTTATCGTCGCCCCTCTTTCA 60.135 52.381 0.00 0.00 0.00 2.69
1898 3313 1.187974 TATCGTCGCCCCTCTTTCAA 58.812 50.000 0.00 0.00 0.00 2.69
1899 3314 0.108138 ATCGTCGCCCCTCTTTCAAG 60.108 55.000 0.00 0.00 0.00 3.02
1900 3315 1.183030 TCGTCGCCCCTCTTTCAAGA 61.183 55.000 0.00 0.00 0.00 3.02
1901 3316 0.108138 CGTCGCCCCTCTTTCAAGAT 60.108 55.000 0.00 0.00 33.93 2.40
1902 3317 1.676014 CGTCGCCCCTCTTTCAAGATT 60.676 52.381 0.00 0.00 33.93 2.40
1903 3318 2.010497 GTCGCCCCTCTTTCAAGATTC 58.990 52.381 0.00 0.00 33.93 2.52
1904 3319 1.009829 CGCCCCTCTTTCAAGATTCG 58.990 55.000 0.00 0.00 33.93 3.34
1905 3320 1.676014 CGCCCCTCTTTCAAGATTCGT 60.676 52.381 0.00 0.00 33.93 3.85
1906 3321 2.418197 CGCCCCTCTTTCAAGATTCGTA 60.418 50.000 0.00 0.00 33.93 3.43
1907 3322 3.606687 GCCCCTCTTTCAAGATTCGTAA 58.393 45.455 0.00 0.00 33.93 3.18
1908 3323 4.007659 GCCCCTCTTTCAAGATTCGTAAA 58.992 43.478 0.00 0.00 33.93 2.01
1909 3324 4.457949 GCCCCTCTTTCAAGATTCGTAAAA 59.542 41.667 0.00 0.00 33.93 1.52
1910 3325 5.125578 GCCCCTCTTTCAAGATTCGTAAAAT 59.874 40.000 0.00 0.00 33.93 1.82
1911 3326 6.350194 GCCCCTCTTTCAAGATTCGTAAAATT 60.350 38.462 0.00 0.00 33.93 1.82
1912 3327 7.029563 CCCCTCTTTCAAGATTCGTAAAATTG 58.970 38.462 0.00 0.00 33.93 2.32
1913 3328 6.528072 CCCTCTTTCAAGATTCGTAAAATTGC 59.472 38.462 0.00 0.00 33.93 3.56
1914 3329 7.308435 CCTCTTTCAAGATTCGTAAAATTGCT 58.692 34.615 0.00 0.00 33.93 3.91
1915 3330 7.272084 CCTCTTTCAAGATTCGTAAAATTGCTG 59.728 37.037 0.00 0.00 33.93 4.41
1916 3331 6.582295 TCTTTCAAGATTCGTAAAATTGCTGC 59.418 34.615 0.00 0.00 0.00 5.25
1917 3332 5.627499 TCAAGATTCGTAAAATTGCTGCT 57.373 34.783 0.00 0.00 0.00 4.24
1918 3333 5.393124 TCAAGATTCGTAAAATTGCTGCTG 58.607 37.500 0.00 0.00 0.00 4.41
1919 3334 4.361451 AGATTCGTAAAATTGCTGCTGG 57.639 40.909 0.00 0.00 0.00 4.85
1920 3335 3.758554 AGATTCGTAAAATTGCTGCTGGT 59.241 39.130 0.00 0.00 0.00 4.00
1921 3336 4.941263 AGATTCGTAAAATTGCTGCTGGTA 59.059 37.500 0.00 0.00 0.00 3.25
1922 3337 5.590259 AGATTCGTAAAATTGCTGCTGGTAT 59.410 36.000 0.00 0.00 0.00 2.73
1923 3338 5.637006 TTCGTAAAATTGCTGCTGGTATT 57.363 34.783 0.00 0.00 0.00 1.89
1924 3339 5.637006 TCGTAAAATTGCTGCTGGTATTT 57.363 34.783 0.00 0.00 0.00 1.40
1925 3340 5.636837 TCGTAAAATTGCTGCTGGTATTTC 58.363 37.500 0.00 0.00 0.00 2.17
1926 3341 4.798387 CGTAAAATTGCTGCTGGTATTTCC 59.202 41.667 0.00 0.00 0.00 3.13
1927 3342 3.508744 AAATTGCTGCTGGTATTTCCG 57.491 42.857 0.00 0.00 39.52 4.30
1928 3343 0.740737 ATTGCTGCTGGTATTTCCGC 59.259 50.000 0.00 0.00 39.52 5.54
1929 3344 0.607762 TTGCTGCTGGTATTTCCGCA 60.608 50.000 0.00 0.00 40.97 5.69
1930 3345 1.305219 TGCTGCTGGTATTTCCGCAC 61.305 55.000 0.00 0.00 39.41 5.34
1931 3346 1.026718 GCTGCTGGTATTTCCGCACT 61.027 55.000 0.00 0.00 39.41 4.40
1932 3347 0.729116 CTGCTGGTATTTCCGCACTG 59.271 55.000 0.00 0.00 39.41 3.66
1933 3348 1.305219 TGCTGGTATTTCCGCACTGC 61.305 55.000 0.00 0.00 39.41 4.40
1934 3349 1.026718 GCTGGTATTTCCGCACTGCT 61.027 55.000 0.00 0.00 39.52 4.24
1935 3350 0.729116 CTGGTATTTCCGCACTGCTG 59.271 55.000 0.00 0.00 39.52 4.41
1936 3351 0.036164 TGGTATTTCCGCACTGCTGT 59.964 50.000 0.00 0.00 39.52 4.40
1937 3352 1.165270 GGTATTTCCGCACTGCTGTT 58.835 50.000 0.00 0.00 0.00 3.16
1938 3353 1.539827 GGTATTTCCGCACTGCTGTTT 59.460 47.619 0.00 0.00 0.00 2.83
1939 3354 2.030274 GGTATTTCCGCACTGCTGTTTT 60.030 45.455 0.00 0.00 0.00 2.43
1940 3355 3.189702 GGTATTTCCGCACTGCTGTTTTA 59.810 43.478 0.00 0.00 0.00 1.52
1941 3356 2.766970 TTTCCGCACTGCTGTTTTAC 57.233 45.000 0.00 0.00 0.00 2.01
1942 3357 1.961793 TTCCGCACTGCTGTTTTACT 58.038 45.000 0.00 0.00 0.00 2.24
1943 3358 1.225855 TCCGCACTGCTGTTTTACTG 58.774 50.000 0.00 0.00 0.00 2.74
1944 3359 1.202592 TCCGCACTGCTGTTTTACTGA 60.203 47.619 0.00 0.00 0.00 3.41
1945 3360 1.069906 CCGCACTGCTGTTTTACTGAC 60.070 52.381 0.00 0.00 0.00 3.51
1946 3361 1.597195 CGCACTGCTGTTTTACTGACA 59.403 47.619 0.00 0.00 0.00 3.58
1947 3362 2.348872 CGCACTGCTGTTTTACTGACAG 60.349 50.000 0.00 0.00 45.64 3.51
1952 3367 2.977405 CTGTTTTACTGACAGCTGGC 57.023 50.000 19.93 17.40 38.20 4.85
1953 3368 2.221169 CTGTTTTACTGACAGCTGGCA 58.779 47.619 23.77 23.77 38.20 4.92
1954 3369 2.816087 CTGTTTTACTGACAGCTGGCAT 59.184 45.455 25.67 15.79 38.20 4.40
1955 3370 2.813754 TGTTTTACTGACAGCTGGCATC 59.186 45.455 25.67 9.50 29.25 3.91
1956 3371 3.077359 GTTTTACTGACAGCTGGCATCT 58.923 45.455 25.67 14.05 29.25 2.90
1957 3372 2.680312 TTACTGACAGCTGGCATCTC 57.320 50.000 25.67 8.66 29.25 2.75
1958 3373 1.560505 TACTGACAGCTGGCATCTCA 58.439 50.000 25.67 13.28 29.25 3.27
1959 3374 0.910338 ACTGACAGCTGGCATCTCAT 59.090 50.000 25.67 3.47 29.25 2.90
1960 3375 2.113807 ACTGACAGCTGGCATCTCATA 58.886 47.619 25.67 0.00 29.25 2.15
1961 3376 2.704596 ACTGACAGCTGGCATCTCATAT 59.295 45.455 25.67 2.67 29.25 1.78
1962 3377 3.244146 ACTGACAGCTGGCATCTCATATC 60.244 47.826 25.67 4.59 29.25 1.63
1963 3378 2.970640 TGACAGCTGGCATCTCATATCT 59.029 45.455 21.20 0.00 0.00 1.98
1964 3379 3.244112 TGACAGCTGGCATCTCATATCTG 60.244 47.826 21.20 0.00 0.00 2.90
1965 3380 2.704596 ACAGCTGGCATCTCATATCTGT 59.295 45.455 19.93 0.00 0.00 3.41
1966 3381 3.067833 CAGCTGGCATCTCATATCTGTG 58.932 50.000 5.57 0.00 0.00 3.66
1967 3382 2.704596 AGCTGGCATCTCATATCTGTGT 59.295 45.455 0.00 0.00 0.00 3.72
1968 3383 3.136077 AGCTGGCATCTCATATCTGTGTT 59.864 43.478 0.00 0.00 0.00 3.32
1969 3384 3.881688 GCTGGCATCTCATATCTGTGTTT 59.118 43.478 0.00 0.00 0.00 2.83
1970 3385 4.337555 GCTGGCATCTCATATCTGTGTTTT 59.662 41.667 0.00 0.00 0.00 2.43
1971 3386 5.163581 GCTGGCATCTCATATCTGTGTTTTT 60.164 40.000 0.00 0.00 0.00 1.94
1972 3387 6.198650 TGGCATCTCATATCTGTGTTTTTG 57.801 37.500 0.00 0.00 0.00 2.44
1973 3388 5.945191 TGGCATCTCATATCTGTGTTTTTGA 59.055 36.000 0.00 0.00 0.00 2.69
1974 3389 6.604396 TGGCATCTCATATCTGTGTTTTTGAT 59.396 34.615 0.00 0.00 0.00 2.57
1975 3390 6.916387 GGCATCTCATATCTGTGTTTTTGATG 59.084 38.462 0.00 0.00 0.00 3.07
1976 3391 6.916387 GCATCTCATATCTGTGTTTTTGATGG 59.084 38.462 0.00 0.00 0.00 3.51
1977 3392 6.441093 TCTCATATCTGTGTTTTTGATGGC 57.559 37.500 0.00 0.00 0.00 4.40
1978 3393 6.182627 TCTCATATCTGTGTTTTTGATGGCT 58.817 36.000 0.00 0.00 0.00 4.75
1979 3394 6.094464 TCTCATATCTGTGTTTTTGATGGCTG 59.906 38.462 0.00 0.00 0.00 4.85
1980 3395 2.798976 TCTGTGTTTTTGATGGCTGC 57.201 45.000 0.00 0.00 0.00 5.25
1981 3396 1.340889 TCTGTGTTTTTGATGGCTGCC 59.659 47.619 12.87 12.87 0.00 4.85
1982 3397 1.068895 CTGTGTTTTTGATGGCTGCCA 59.931 47.619 25.65 25.65 38.19 4.92
1984 3399 2.070783 GTGTTTTTGATGGCTGCCATG 58.929 47.619 36.99 0.00 45.26 3.66
1985 3400 1.081094 GTTTTTGATGGCTGCCATGC 58.919 50.000 36.99 26.08 45.26 4.06
1986 3401 0.390078 TTTTTGATGGCTGCCATGCG 60.390 50.000 36.99 0.00 45.26 4.73
1987 3402 1.249469 TTTTGATGGCTGCCATGCGA 61.249 50.000 36.99 23.43 45.26 5.10
1988 3403 1.249469 TTTGATGGCTGCCATGCGAA 61.249 50.000 36.99 26.91 45.26 4.70
1989 3404 1.249469 TTGATGGCTGCCATGCGAAA 61.249 50.000 36.99 21.59 45.26 3.46
1990 3405 1.038681 TGATGGCTGCCATGCGAAAT 61.039 50.000 36.99 14.00 45.26 2.17
1991 3406 0.596600 GATGGCTGCCATGCGAAATG 60.597 55.000 36.99 0.00 45.26 2.32
1992 3407 1.324740 ATGGCTGCCATGCGAAATGT 61.325 50.000 32.12 6.59 43.39 2.71
1993 3408 1.226773 GGCTGCCATGCGAAATGTC 60.227 57.895 15.17 0.00 0.00 3.06
1994 3409 1.507630 GCTGCCATGCGAAATGTCA 59.492 52.632 0.00 0.00 0.00 3.58
1995 3410 0.109179 GCTGCCATGCGAAATGTCAA 60.109 50.000 0.00 0.00 0.00 3.18
1996 3411 1.470285 GCTGCCATGCGAAATGTCAAT 60.470 47.619 0.00 0.00 0.00 2.57
1997 3412 2.456989 CTGCCATGCGAAATGTCAATC 58.543 47.619 0.00 0.00 0.00 2.67
1998 3413 2.093890 TGCCATGCGAAATGTCAATCT 58.906 42.857 0.00 0.00 0.00 2.40
1999 3414 2.159352 TGCCATGCGAAATGTCAATCTG 60.159 45.455 0.00 0.00 0.00 2.90
2000 3415 2.797087 GCCATGCGAAATGTCAATCTGG 60.797 50.000 0.00 0.00 0.00 3.86
2001 3416 2.424601 CCATGCGAAATGTCAATCTGGT 59.575 45.455 0.00 0.00 0.00 4.00
2002 3417 3.431856 CATGCGAAATGTCAATCTGGTG 58.568 45.455 0.00 0.00 0.00 4.17
2003 3418 2.503331 TGCGAAATGTCAATCTGGTGT 58.497 42.857 0.00 0.00 0.00 4.16
2004 3419 2.226200 TGCGAAATGTCAATCTGGTGTG 59.774 45.455 0.00 0.00 0.00 3.82
2005 3420 2.414559 GCGAAATGTCAATCTGGTGTGG 60.415 50.000 0.00 0.00 0.00 4.17
2006 3421 2.813754 CGAAATGTCAATCTGGTGTGGT 59.186 45.455 0.00 0.00 0.00 4.16
2007 3422 3.365264 CGAAATGTCAATCTGGTGTGGTG 60.365 47.826 0.00 0.00 0.00 4.17
2008 3423 1.538047 ATGTCAATCTGGTGTGGTGC 58.462 50.000 0.00 0.00 0.00 5.01
2009 3424 0.537143 TGTCAATCTGGTGTGGTGCC 60.537 55.000 0.00 0.00 0.00 5.01
2010 3425 0.250901 GTCAATCTGGTGTGGTGCCT 60.251 55.000 0.00 0.00 0.00 4.75
2011 3426 0.250858 TCAATCTGGTGTGGTGCCTG 60.251 55.000 0.00 0.00 0.00 4.85
2012 3427 1.604593 AATCTGGTGTGGTGCCTGC 60.605 57.895 0.00 0.00 0.00 4.85
2013 3428 3.907260 ATCTGGTGTGGTGCCTGCG 62.907 63.158 0.00 0.00 0.00 5.18
2022 3437 4.840005 GTGCCTGCGCCCTACCTC 62.840 72.222 4.18 0.00 0.00 3.85
2024 3439 4.537433 GCCTGCGCCCTACCTCTG 62.537 72.222 4.18 0.00 0.00 3.35
2025 3440 4.537433 CCTGCGCCCTACCTCTGC 62.537 72.222 4.18 0.00 0.00 4.26
2026 3441 3.774528 CTGCGCCCTACCTCTGCA 61.775 66.667 4.18 0.00 0.00 4.41
2027 3442 3.315142 CTGCGCCCTACCTCTGCAA 62.315 63.158 4.18 0.00 34.78 4.08
2028 3443 2.190578 GCGCCCTACCTCTGCAAT 59.809 61.111 0.00 0.00 0.00 3.56
2029 3444 2.182842 GCGCCCTACCTCTGCAATG 61.183 63.158 0.00 0.00 0.00 2.82
2030 3445 1.221840 CGCCCTACCTCTGCAATGT 59.778 57.895 0.00 0.00 0.00 2.71
2031 3446 1.091771 CGCCCTACCTCTGCAATGTG 61.092 60.000 0.00 0.00 0.00 3.21
2032 3447 0.035056 GCCCTACCTCTGCAATGTGT 60.035 55.000 0.00 0.00 0.00 3.72
2033 3448 2.014068 GCCCTACCTCTGCAATGTGTC 61.014 57.143 0.00 0.00 0.00 3.67
2034 3449 1.278985 CCCTACCTCTGCAATGTGTCA 59.721 52.381 0.00 0.00 0.00 3.58
2035 3450 2.092753 CCCTACCTCTGCAATGTGTCAT 60.093 50.000 0.00 0.00 0.00 3.06
2036 3451 3.201290 CCTACCTCTGCAATGTGTCATC 58.799 50.000 0.00 0.00 0.00 2.92
2037 3452 3.118482 CCTACCTCTGCAATGTGTCATCT 60.118 47.826 0.00 0.00 0.00 2.90
2038 3453 3.430042 ACCTCTGCAATGTGTCATCTT 57.570 42.857 0.00 0.00 0.00 2.40
2039 3454 3.759581 ACCTCTGCAATGTGTCATCTTT 58.240 40.909 0.00 0.00 0.00 2.52
2040 3455 3.504906 ACCTCTGCAATGTGTCATCTTTG 59.495 43.478 0.00 0.00 0.00 2.77
2041 3456 3.499048 CTCTGCAATGTGTCATCTTTGC 58.501 45.455 13.92 13.92 43.75 3.68
2046 3461 5.600908 GCAATGTGTCATCTTTGCAATTT 57.399 34.783 0.00 0.00 43.30 1.82
2047 3462 5.614760 GCAATGTGTCATCTTTGCAATTTC 58.385 37.500 0.00 0.00 43.30 2.17
2048 3463 5.666913 GCAATGTGTCATCTTTGCAATTTCG 60.667 40.000 0.00 0.00 43.30 3.46
2049 3464 4.566545 TGTGTCATCTTTGCAATTTCGT 57.433 36.364 0.00 0.00 0.00 3.85
2050 3465 4.289342 TGTGTCATCTTTGCAATTTCGTG 58.711 39.130 0.00 0.00 0.00 4.35
2051 3466 3.670055 GTGTCATCTTTGCAATTTCGTGG 59.330 43.478 0.00 0.00 0.00 4.94
2052 3467 3.567585 TGTCATCTTTGCAATTTCGTGGA 59.432 39.130 0.00 0.00 0.00 4.02
2053 3468 4.218200 TGTCATCTTTGCAATTTCGTGGAT 59.782 37.500 0.00 0.00 0.00 3.41
2054 3469 4.795278 GTCATCTTTGCAATTTCGTGGATC 59.205 41.667 0.00 0.00 0.00 3.36
2055 3470 4.701651 TCATCTTTGCAATTTCGTGGATCT 59.298 37.500 0.00 0.00 0.00 2.75
2056 3471 5.183713 TCATCTTTGCAATTTCGTGGATCTT 59.816 36.000 0.00 0.00 0.00 2.40
2057 3472 6.374053 TCATCTTTGCAATTTCGTGGATCTTA 59.626 34.615 0.00 0.00 0.00 2.10
2058 3473 6.567687 TCTTTGCAATTTCGTGGATCTTAA 57.432 33.333 0.00 0.00 0.00 1.85
2059 3474 6.611381 TCTTTGCAATTTCGTGGATCTTAAG 58.389 36.000 0.00 0.00 0.00 1.85
2060 3475 4.355543 TGCAATTTCGTGGATCTTAAGC 57.644 40.909 0.00 0.00 0.00 3.09
2061 3476 3.755905 TGCAATTTCGTGGATCTTAAGCA 59.244 39.130 0.00 0.00 0.00 3.91
2062 3477 4.142622 TGCAATTTCGTGGATCTTAAGCAG 60.143 41.667 0.00 0.00 0.00 4.24
2063 3478 4.094887 GCAATTTCGTGGATCTTAAGCAGA 59.905 41.667 0.00 0.00 35.33 4.26
2064 3479 5.391950 GCAATTTCGTGGATCTTAAGCAGAA 60.392 40.000 0.00 0.00 34.16 3.02
2065 3480 6.253746 CAATTTCGTGGATCTTAAGCAGAAG 58.746 40.000 0.00 0.00 34.16 2.85
2066 3481 4.801330 TTCGTGGATCTTAAGCAGAAGA 57.199 40.909 0.00 3.11 39.71 2.87
2067 3482 4.377839 TCGTGGATCTTAAGCAGAAGAG 57.622 45.455 0.00 0.00 38.80 2.85
2068 3483 3.764434 TCGTGGATCTTAAGCAGAAGAGT 59.236 43.478 0.00 0.00 38.80 3.24
2069 3484 3.862267 CGTGGATCTTAAGCAGAAGAGTG 59.138 47.826 0.00 0.00 38.80 3.51
2070 3485 4.619394 CGTGGATCTTAAGCAGAAGAGTGT 60.619 45.833 0.00 0.00 38.80 3.55
2071 3486 5.241662 GTGGATCTTAAGCAGAAGAGTGTT 58.758 41.667 0.00 0.00 38.80 3.32
2072 3487 5.121454 GTGGATCTTAAGCAGAAGAGTGTTG 59.879 44.000 0.00 0.00 38.80 3.33
2073 3488 5.221722 TGGATCTTAAGCAGAAGAGTGTTGT 60.222 40.000 0.00 0.00 38.80 3.32
2074 3489 5.703130 GGATCTTAAGCAGAAGAGTGTTGTT 59.297 40.000 0.00 0.00 38.80 2.83
2075 3490 6.205658 GGATCTTAAGCAGAAGAGTGTTGTTT 59.794 38.462 0.00 0.00 38.80 2.83
2076 3491 6.363577 TCTTAAGCAGAAGAGTGTTGTTTG 57.636 37.500 0.00 0.00 31.72 2.93
2077 3492 5.296780 TCTTAAGCAGAAGAGTGTTGTTTGG 59.703 40.000 0.00 0.00 31.72 3.28
2078 3493 3.004752 AGCAGAAGAGTGTTGTTTGGT 57.995 42.857 0.00 0.00 0.00 3.67
2079 3494 4.150897 AGCAGAAGAGTGTTGTTTGGTA 57.849 40.909 0.00 0.00 0.00 3.25
2080 3495 3.877508 AGCAGAAGAGTGTTGTTTGGTAC 59.122 43.478 0.00 0.00 0.00 3.34
2081 3496 3.003378 GCAGAAGAGTGTTGTTTGGTACC 59.997 47.826 4.43 4.43 0.00 3.34
2082 3497 3.564225 CAGAAGAGTGTTGTTTGGTACCC 59.436 47.826 10.07 0.00 0.00 3.69
2083 3498 3.201266 AGAAGAGTGTTGTTTGGTACCCA 59.799 43.478 10.07 0.00 0.00 4.51
2084 3499 3.655615 AGAGTGTTGTTTGGTACCCAA 57.344 42.857 10.07 0.82 42.29 4.12
2085 3500 4.178956 AGAGTGTTGTTTGGTACCCAAT 57.821 40.909 10.07 0.00 43.55 3.16
2086 3501 4.542697 AGAGTGTTGTTTGGTACCCAATT 58.457 39.130 10.07 0.00 43.55 2.32
2087 3502 4.959839 AGAGTGTTGTTTGGTACCCAATTT 59.040 37.500 10.07 0.00 43.55 1.82
2088 3503 5.017294 AGTGTTGTTTGGTACCCAATTTG 57.983 39.130 10.07 0.00 43.55 2.32
2089 3504 4.468153 AGTGTTGTTTGGTACCCAATTTGT 59.532 37.500 10.07 0.00 43.55 2.83
2090 3505 5.657302 AGTGTTGTTTGGTACCCAATTTGTA 59.343 36.000 10.07 0.00 43.55 2.41
2091 3506 6.154706 AGTGTTGTTTGGTACCCAATTTGTAA 59.845 34.615 10.07 0.00 43.55 2.41
2092 3507 6.987404 GTGTTGTTTGGTACCCAATTTGTAAT 59.013 34.615 10.07 0.00 43.55 1.89
2093 3508 7.170151 GTGTTGTTTGGTACCCAATTTGTAATC 59.830 37.037 10.07 0.00 43.55 1.75
2094 3509 6.978674 TGTTTGGTACCCAATTTGTAATCA 57.021 33.333 10.07 0.00 43.55 2.57
2095 3510 7.361457 TGTTTGGTACCCAATTTGTAATCAA 57.639 32.000 10.07 0.00 43.55 2.57
2096 3511 7.210873 TGTTTGGTACCCAATTTGTAATCAAC 58.789 34.615 10.07 0.00 43.55 3.18
2097 3512 5.630661 TGGTACCCAATTTGTAATCAACG 57.369 39.130 10.07 0.00 32.93 4.10
2098 3513 5.071370 TGGTACCCAATTTGTAATCAACGT 58.929 37.500 10.07 0.00 32.93 3.99
2099 3514 6.236409 TGGTACCCAATTTGTAATCAACGTA 58.764 36.000 10.07 0.00 32.93 3.57
2100 3515 6.372103 TGGTACCCAATTTGTAATCAACGTAG 59.628 38.462 10.07 0.00 32.93 3.51
2101 3516 5.305139 ACCCAATTTGTAATCAACGTAGC 57.695 39.130 0.00 0.00 32.93 3.58
2102 3517 4.157105 ACCCAATTTGTAATCAACGTAGCC 59.843 41.667 0.00 0.00 32.93 3.93
2103 3518 4.398044 CCCAATTTGTAATCAACGTAGCCT 59.602 41.667 0.00 0.00 32.93 4.58
2104 3519 5.331902 CCAATTTGTAATCAACGTAGCCTG 58.668 41.667 0.00 0.00 32.93 4.85
2105 3520 5.106317 CCAATTTGTAATCAACGTAGCCTGT 60.106 40.000 0.00 0.00 32.93 4.00
2106 3521 5.545658 ATTTGTAATCAACGTAGCCTGTG 57.454 39.130 0.00 0.00 32.93 3.66
2107 3522 3.945981 TGTAATCAACGTAGCCTGTGA 57.054 42.857 0.00 0.00 0.00 3.58
2108 3523 4.465632 TGTAATCAACGTAGCCTGTGAT 57.534 40.909 0.00 0.00 0.00 3.06
2109 3524 4.430007 TGTAATCAACGTAGCCTGTGATC 58.570 43.478 0.00 0.00 0.00 2.92
2110 3525 2.604046 ATCAACGTAGCCTGTGATCC 57.396 50.000 0.00 0.00 0.00 3.36
2111 3526 1.262417 TCAACGTAGCCTGTGATCCA 58.738 50.000 0.00 0.00 0.00 3.41
2112 3527 1.831106 TCAACGTAGCCTGTGATCCAT 59.169 47.619 0.00 0.00 0.00 3.41
2113 3528 3.028130 TCAACGTAGCCTGTGATCCATA 58.972 45.455 0.00 0.00 0.00 2.74
2114 3529 3.449377 TCAACGTAGCCTGTGATCCATAA 59.551 43.478 0.00 0.00 0.00 1.90
2115 3530 4.100963 TCAACGTAGCCTGTGATCCATAAT 59.899 41.667 0.00 0.00 0.00 1.28
2116 3531 3.995199 ACGTAGCCTGTGATCCATAATG 58.005 45.455 0.00 0.00 0.00 1.90
2117 3532 3.244215 ACGTAGCCTGTGATCCATAATGG 60.244 47.826 0.00 0.00 39.43 3.16
2118 3533 2.965671 AGCCTGTGATCCATAATGGG 57.034 50.000 0.00 0.00 38.32 4.00
2119 3534 1.202976 AGCCTGTGATCCATAATGGGC 60.203 52.381 0.00 0.00 38.32 5.36
2120 3535 1.202976 GCCTGTGATCCATAATGGGCT 60.203 52.381 0.00 0.00 38.32 5.19
2121 3536 2.787994 CCTGTGATCCATAATGGGCTC 58.212 52.381 0.00 0.00 38.32 4.70
2122 3537 2.374504 CCTGTGATCCATAATGGGCTCT 59.625 50.000 0.00 0.00 38.32 4.09
2123 3538 3.409570 CTGTGATCCATAATGGGCTCTG 58.590 50.000 0.00 0.00 38.32 3.35
2124 3539 2.779430 TGTGATCCATAATGGGCTCTGT 59.221 45.455 0.00 0.00 38.32 3.41
2125 3540 3.202818 TGTGATCCATAATGGGCTCTGTT 59.797 43.478 0.00 0.00 38.32 3.16
2126 3541 3.817647 GTGATCCATAATGGGCTCTGTTC 59.182 47.826 0.00 0.00 38.32 3.18
2127 3542 3.718434 TGATCCATAATGGGCTCTGTTCT 59.282 43.478 0.00 0.00 38.32 3.01
2128 3543 4.166725 TGATCCATAATGGGCTCTGTTCTT 59.833 41.667 0.00 0.00 38.32 2.52
2129 3544 4.156455 TCCATAATGGGCTCTGTTCTTC 57.844 45.455 0.00 0.00 38.32 2.87
2130 3545 3.523157 TCCATAATGGGCTCTGTTCTTCA 59.477 43.478 0.00 0.00 38.32 3.02
2131 3546 4.166725 TCCATAATGGGCTCTGTTCTTCAT 59.833 41.667 0.00 0.00 38.32 2.57
2132 3547 4.891756 CCATAATGGGCTCTGTTCTTCATT 59.108 41.667 0.00 0.00 32.67 2.57
2133 3548 5.361857 CCATAATGGGCTCTGTTCTTCATTT 59.638 40.000 0.00 0.00 32.67 2.32
2134 3549 6.127253 CCATAATGGGCTCTGTTCTTCATTTT 60.127 38.462 0.00 0.00 32.67 1.82
2135 3550 7.068593 CCATAATGGGCTCTGTTCTTCATTTTA 59.931 37.037 0.00 0.00 32.67 1.52
2136 3551 5.904362 ATGGGCTCTGTTCTTCATTTTAC 57.096 39.130 0.00 0.00 0.00 2.01
2137 3552 4.724399 TGGGCTCTGTTCTTCATTTTACA 58.276 39.130 0.00 0.00 0.00 2.41
2138 3553 4.518970 TGGGCTCTGTTCTTCATTTTACAC 59.481 41.667 0.00 0.00 0.00 2.90
2139 3554 4.762251 GGGCTCTGTTCTTCATTTTACACT 59.238 41.667 0.00 0.00 0.00 3.55
2140 3555 5.106515 GGGCTCTGTTCTTCATTTTACACTC 60.107 44.000 0.00 0.00 0.00 3.51
2141 3556 5.703130 GGCTCTGTTCTTCATTTTACACTCT 59.297 40.000 0.00 0.00 0.00 3.24
2142 3557 6.348050 GGCTCTGTTCTTCATTTTACACTCTG 60.348 42.308 0.00 0.00 0.00 3.35
2143 3558 6.348050 GCTCTGTTCTTCATTTTACACTCTGG 60.348 42.308 0.00 0.00 0.00 3.86
2144 3559 5.470098 TCTGTTCTTCATTTTACACTCTGGC 59.530 40.000 0.00 0.00 0.00 4.85
2145 3560 5.129634 TGTTCTTCATTTTACACTCTGGCA 58.870 37.500 0.00 0.00 0.00 4.92
2146 3561 5.008613 TGTTCTTCATTTTACACTCTGGCAC 59.991 40.000 0.00 0.00 0.00 5.01
2147 3562 4.072131 TCTTCATTTTACACTCTGGCACC 58.928 43.478 0.00 0.00 0.00 5.01
2148 3563 3.500448 TCATTTTACACTCTGGCACCA 57.500 42.857 0.00 0.00 0.00 4.17
2149 3564 3.146066 TCATTTTACACTCTGGCACCAC 58.854 45.455 0.00 0.00 0.00 4.16
2150 3565 2.719531 TTTTACACTCTGGCACCACA 57.280 45.000 0.00 0.00 0.00 4.17
2151 3566 1.961793 TTTACACTCTGGCACCACAC 58.038 50.000 0.00 0.00 0.00 3.82
2152 3567 0.107831 TTACACTCTGGCACCACACC 59.892 55.000 0.00 0.00 0.00 4.16
2153 3568 1.051556 TACACTCTGGCACCACACCA 61.052 55.000 0.00 0.00 35.40 4.17
2158 3573 3.011014 TGGCACCACACCAGGAAA 58.989 55.556 0.00 0.00 32.06 3.13
2159 3574 1.307986 TGGCACCACACCAGGAAAA 59.692 52.632 0.00 0.00 32.06 2.29
2160 3575 0.105760 TGGCACCACACCAGGAAAAT 60.106 50.000 0.00 0.00 32.06 1.82
2161 3576 1.145945 TGGCACCACACCAGGAAAATA 59.854 47.619 0.00 0.00 32.06 1.40
2162 3577 1.544246 GGCACCACACCAGGAAAATAC 59.456 52.381 0.00 0.00 0.00 1.89
2163 3578 2.235016 GCACCACACCAGGAAAATACA 58.765 47.619 0.00 0.00 0.00 2.29
2164 3579 2.625790 GCACCACACCAGGAAAATACAA 59.374 45.455 0.00 0.00 0.00 2.41
2165 3580 3.305335 GCACCACACCAGGAAAATACAAG 60.305 47.826 0.00 0.00 0.00 3.16
2166 3581 3.255642 CACCACACCAGGAAAATACAAGG 59.744 47.826 0.00 0.00 0.00 3.61
2167 3582 3.139397 ACCACACCAGGAAAATACAAGGA 59.861 43.478 0.00 0.00 0.00 3.36
2168 3583 4.148838 CCACACCAGGAAAATACAAGGAA 58.851 43.478 0.00 0.00 0.00 3.36
2169 3584 4.586841 CCACACCAGGAAAATACAAGGAAA 59.413 41.667 0.00 0.00 0.00 3.13
2170 3585 5.245977 CCACACCAGGAAAATACAAGGAAAT 59.754 40.000 0.00 0.00 0.00 2.17
2171 3586 6.435904 CCACACCAGGAAAATACAAGGAAATA 59.564 38.462 0.00 0.00 0.00 1.40
2172 3587 7.039363 CCACACCAGGAAAATACAAGGAAATAA 60.039 37.037 0.00 0.00 0.00 1.40
2173 3588 8.028938 CACACCAGGAAAATACAAGGAAATAAG 58.971 37.037 0.00 0.00 0.00 1.73
2174 3589 7.728532 ACACCAGGAAAATACAAGGAAATAAGT 59.271 33.333 0.00 0.00 0.00 2.24
2175 3590 8.028938 CACCAGGAAAATACAAGGAAATAAGTG 58.971 37.037 0.00 0.00 0.00 3.16
2176 3591 7.035612 CCAGGAAAATACAAGGAAATAAGTGC 58.964 38.462 0.00 0.00 0.00 4.40
2177 3592 7.309744 CCAGGAAAATACAAGGAAATAAGTGCA 60.310 37.037 0.00 0.00 0.00 4.57
2178 3593 7.756722 CAGGAAAATACAAGGAAATAAGTGCAG 59.243 37.037 0.00 0.00 0.00 4.41
2179 3594 7.669722 AGGAAAATACAAGGAAATAAGTGCAGA 59.330 33.333 0.00 0.00 0.00 4.26
2180 3595 7.970614 GGAAAATACAAGGAAATAAGTGCAGAG 59.029 37.037 0.00 0.00 0.00 3.35
2181 3596 6.442513 AATACAAGGAAATAAGTGCAGAGC 57.557 37.500 0.00 0.00 0.00 4.09
2182 3597 2.744202 ACAAGGAAATAAGTGCAGAGCG 59.256 45.455 0.00 0.00 0.00 5.03
2183 3598 2.744202 CAAGGAAATAAGTGCAGAGCGT 59.256 45.455 0.00 0.00 0.00 5.07
2184 3599 3.059352 AGGAAATAAGTGCAGAGCGTT 57.941 42.857 0.00 0.00 0.00 4.84
2185 3600 3.412386 AGGAAATAAGTGCAGAGCGTTT 58.588 40.909 0.00 0.00 0.00 3.60
2186 3601 3.821033 AGGAAATAAGTGCAGAGCGTTTT 59.179 39.130 0.00 0.00 0.00 2.43
2187 3602 3.914364 GGAAATAAGTGCAGAGCGTTTTG 59.086 43.478 0.00 0.00 0.00 2.44
2188 3603 3.559238 AATAAGTGCAGAGCGTTTTGG 57.441 42.857 0.00 0.00 0.00 3.28
2189 3604 2.248280 TAAGTGCAGAGCGTTTTGGA 57.752 45.000 0.00 0.00 0.00 3.53
2190 3605 1.388547 AAGTGCAGAGCGTTTTGGAA 58.611 45.000 0.00 0.00 0.00 3.53
2191 3606 0.947244 AGTGCAGAGCGTTTTGGAAG 59.053 50.000 0.00 0.00 0.00 3.46
2192 3607 0.661483 GTGCAGAGCGTTTTGGAAGC 60.661 55.000 0.00 0.00 0.00 3.86
2193 3608 0.819259 TGCAGAGCGTTTTGGAAGCT 60.819 50.000 0.00 0.00 44.80 3.74
2194 3609 0.386478 GCAGAGCGTTTTGGAAGCTG 60.386 55.000 0.00 0.00 41.84 4.24
2195 3610 0.386478 CAGAGCGTTTTGGAAGCTGC 60.386 55.000 0.00 0.00 41.84 5.25
2196 3611 0.819259 AGAGCGTTTTGGAAGCTGCA 60.819 50.000 1.02 0.00 41.84 4.41
2197 3612 0.386478 GAGCGTTTTGGAAGCTGCAG 60.386 55.000 10.11 10.11 41.84 4.41
2198 3613 2.018324 GCGTTTTGGAAGCTGCAGC 61.018 57.895 31.53 31.53 42.49 5.25
2213 3628 4.943252 AGCTTGCACGCTGGCACT 62.943 61.111 17.98 0.00 44.86 4.40
2214 3629 4.695231 GCTTGCACGCTGGCACTG 62.695 66.667 8.12 0.00 44.86 3.66
2215 3630 3.282157 CTTGCACGCTGGCACTGT 61.282 61.111 0.00 0.00 44.86 3.55
2216 3631 2.828095 TTGCACGCTGGCACTGTT 60.828 55.556 0.00 0.00 44.86 3.16
2217 3632 2.722130 CTTGCACGCTGGCACTGTTC 62.722 60.000 0.00 0.00 44.86 3.18
2218 3633 2.974698 GCACGCTGGCACTGTTCT 60.975 61.111 0.00 0.00 0.00 3.01
2219 3634 2.546494 GCACGCTGGCACTGTTCTT 61.546 57.895 0.00 0.00 0.00 2.52
2220 3635 1.571460 CACGCTGGCACTGTTCTTC 59.429 57.895 0.00 0.00 0.00 2.87
2221 3636 1.956170 ACGCTGGCACTGTTCTTCG 60.956 57.895 0.00 0.00 0.00 3.79
2222 3637 1.956170 CGCTGGCACTGTTCTTCGT 60.956 57.895 0.00 0.00 0.00 3.85
2223 3638 1.498865 CGCTGGCACTGTTCTTCGTT 61.499 55.000 0.00 0.00 0.00 3.85
2224 3639 0.663153 GCTGGCACTGTTCTTCGTTT 59.337 50.000 0.00 0.00 0.00 3.60
2225 3640 1.065551 GCTGGCACTGTTCTTCGTTTT 59.934 47.619 0.00 0.00 0.00 2.43
2226 3641 2.719798 CTGGCACTGTTCTTCGTTTTG 58.280 47.619 0.00 0.00 0.00 2.44
2227 3642 1.202245 TGGCACTGTTCTTCGTTTTGC 60.202 47.619 0.00 0.00 0.00 3.68
2228 3643 1.202245 GGCACTGTTCTTCGTTTTGCA 60.202 47.619 0.00 0.00 0.00 4.08
2229 3644 1.846175 GCACTGTTCTTCGTTTTGCAC 59.154 47.619 0.00 0.00 0.00 4.57
2237 3652 2.026014 CGTTTTGCACGCTGCCTT 59.974 55.556 7.38 0.00 44.23 4.35
2238 3653 1.281353 CGTTTTGCACGCTGCCTTA 59.719 52.632 7.38 0.00 44.23 2.69
2239 3654 0.996727 CGTTTTGCACGCTGCCTTAC 60.997 55.000 7.38 2.88 44.23 2.34
2240 3655 0.030101 GTTTTGCACGCTGCCTTACA 59.970 50.000 7.38 0.00 44.23 2.41
2250 3665 1.359848 CTGCCTTACAGTTAGCCACG 58.640 55.000 0.00 0.00 41.86 4.94
2251 3666 0.682852 TGCCTTACAGTTAGCCACGT 59.317 50.000 0.00 0.00 0.00 4.49
2252 3667 1.076332 GCCTTACAGTTAGCCACGTG 58.924 55.000 9.08 9.08 0.00 4.49
2253 3668 1.076332 CCTTACAGTTAGCCACGTGC 58.924 55.000 10.91 5.91 41.71 5.34
2262 3677 3.269347 GCCACGTGCGTCAGTGTT 61.269 61.111 10.91 0.00 36.69 3.32
2263 3678 2.928361 CCACGTGCGTCAGTGTTC 59.072 61.111 10.91 0.00 36.69 3.18
2264 3679 2.594962 CCACGTGCGTCAGTGTTCC 61.595 63.158 10.91 0.00 36.69 3.62
2265 3680 1.880796 CACGTGCGTCAGTGTTCCA 60.881 57.895 0.82 0.00 33.97 3.53
2266 3681 1.069090 ACGTGCGTCAGTGTTCCAT 59.931 52.632 0.00 0.00 0.00 3.41
2267 3682 0.944311 ACGTGCGTCAGTGTTCCATC 60.944 55.000 0.00 0.00 0.00 3.51
2268 3683 1.626654 CGTGCGTCAGTGTTCCATCC 61.627 60.000 0.00 0.00 0.00 3.51
2269 3684 1.374125 TGCGTCAGTGTTCCATCCG 60.374 57.895 0.00 0.00 0.00 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
244 520 9.920133 CATCTCAGCATGTACATTAATAGTACT 57.080 33.333 5.37 0.00 41.76 2.73
258 550 5.759273 GCTTCTAGAATTCATCTCAGCATGT 59.241 40.000 5.44 0.00 39.71 3.21
326 618 4.808895 TCGTCTCACCATGCACATTAATAC 59.191 41.667 0.00 0.00 0.00 1.89
336 628 4.046938 TCTAGAATTCGTCTCACCATGC 57.953 45.455 0.00 0.00 37.84 4.06
347 639 7.188834 TGCACATTAATTGCTTCTAGAATTCG 58.811 34.615 5.44 0.00 40.86 3.34
494 789 6.882610 TTTGCATCTGAAATTACTCACACT 57.117 33.333 0.00 0.00 0.00 3.55
555 850 1.798813 CGTTGACCAACCTCTTAGCAC 59.201 52.381 7.24 0.00 38.03 4.40
557 852 2.450609 TCGTTGACCAACCTCTTAGC 57.549 50.000 7.24 0.00 38.03 3.09
579 1863 4.080582 CCTCACCCAGGTGTTGTATAATGA 60.081 45.833 16.22 0.00 45.55 2.57
638 1922 0.467290 GCCGGAGAGAGAGGATGAGT 60.467 60.000 5.05 0.00 0.00 3.41
655 1941 4.581824 TCATAGGATGCTCAAGAAAATGCC 59.418 41.667 0.00 0.00 0.00 4.40
665 1951 1.957177 GAGTCGGTCATAGGATGCTCA 59.043 52.381 0.00 0.00 0.00 4.26
666 1952 1.271102 GGAGTCGGTCATAGGATGCTC 59.729 57.143 0.00 0.00 0.00 4.26
672 1958 1.200519 TTTGGGGAGTCGGTCATAGG 58.799 55.000 0.00 0.00 0.00 2.57
680 1966 4.270008 AGGTGATTAATTTTGGGGAGTCG 58.730 43.478 0.00 0.00 0.00 4.18
712 1998 7.223584 TCAAGTGAGGTGATTAATTTCACTCA 58.776 34.615 18.13 13.54 45.52 3.41
773 2121 1.886542 GGCCGGAAAGTGTTTGAAGAT 59.113 47.619 5.05 0.00 0.00 2.40
775 2123 0.313987 GGGCCGGAAAGTGTTTGAAG 59.686 55.000 5.05 0.00 0.00 3.02
788 2136 4.834892 CGTACGTACGTGGGCCGG 62.835 72.222 33.95 9.02 44.13 6.13
798 2146 1.373590 GCCTTCCGGGTACGTACGTA 61.374 60.000 23.60 23.60 38.78 3.57
906 2273 2.683475 GATGGAAGGTGGGGGTGG 59.317 66.667 0.00 0.00 0.00 4.61
907 2274 2.272146 CGATGGAAGGTGGGGGTG 59.728 66.667 0.00 0.00 0.00 4.61
908 2275 3.728373 GCGATGGAAGGTGGGGGT 61.728 66.667 0.00 0.00 0.00 4.95
909 2276 4.856801 CGCGATGGAAGGTGGGGG 62.857 72.222 0.00 0.00 0.00 5.40
960 2327 2.908428 TGGTGCTGCTGCTGTTGG 60.908 61.111 17.00 0.00 40.48 3.77
1197 2564 2.331805 CCGACGGCTATGACGAGG 59.668 66.667 0.00 0.00 35.20 4.63
1218 2585 0.744771 GCTTGGGGTCGGACTTGATC 60.745 60.000 8.23 0.00 0.00 2.92
1282 2649 3.950254 CTCGATCGGACGGACGGG 61.950 72.222 16.41 4.84 0.00 5.28
1290 2657 1.066152 CTGTTGCATCTCTCGATCGGA 59.934 52.381 16.41 10.48 0.00 4.55
1291 2658 1.202348 ACTGTTGCATCTCTCGATCGG 60.202 52.381 16.41 6.26 0.00 4.18
1292 2659 2.115595 GACTGTTGCATCTCTCGATCG 58.884 52.381 9.36 9.36 0.00 3.69
1345 2733 9.944376 ACAGATAATTCTAGCAAGTTTTACTGA 57.056 29.630 0.00 0.00 0.00 3.41
1346 2734 9.979270 CACAGATAATTCTAGCAAGTTTTACTG 57.021 33.333 0.00 0.00 0.00 2.74
1377 2765 0.467384 TCCAGAGCAGAATAGCAGGC 59.533 55.000 0.00 0.00 36.85 4.85
1458 2846 7.120138 CGGATATCATCAATCACATCATCCAAA 59.880 37.037 4.83 0.00 31.67 3.28
1461 2849 6.036844 CACGGATATCATCAATCACATCATCC 59.963 42.308 4.83 0.00 0.00 3.51
1463 2851 6.370718 CACACGGATATCATCAATCACATCAT 59.629 38.462 4.83 0.00 0.00 2.45
1510 2898 0.250858 CAGCCACCAAGATCCACACA 60.251 55.000 0.00 0.00 0.00 3.72
1584 2973 4.697352 AGAACACAAATCCTACTGCATGTC 59.303 41.667 0.00 0.00 0.00 3.06
1593 2982 6.533730 ACATGAACAGAGAACACAAATCCTA 58.466 36.000 0.00 0.00 0.00 2.94
1640 3031 2.089980 GCATCCAGATCATATGGCACC 58.910 52.381 2.13 0.00 37.76 5.01
1644 3035 3.430513 CGAGAGGCATCCAGATCATATGG 60.431 52.174 2.13 0.00 39.33 2.74
1645 3036 3.783191 CGAGAGGCATCCAGATCATATG 58.217 50.000 0.00 0.00 0.00 1.78
1676 3067 9.467258 TTTGAAATCATTGATGAAAACAGAGAC 57.533 29.630 0.00 0.00 40.69 3.36
1678 3069 9.472361 ACTTTGAAATCATTGATGAAAACAGAG 57.528 29.630 0.00 5.95 40.69 3.35
1679 3070 9.820725 AACTTTGAAATCATTGATGAAAACAGA 57.179 25.926 0.00 0.00 40.69 3.41
1729 3134 0.604578 TGCTGAAAAGATGCAAGGCC 59.395 50.000 0.00 0.00 33.48 5.19
1730 3135 2.443887 TTGCTGAAAAGATGCAAGGC 57.556 45.000 0.00 0.00 41.06 4.35
1746 3151 2.345760 CCCACTGTGAGCCCATTGC 61.346 63.158 9.86 0.00 41.71 3.56
1808 3213 5.975344 GGATGAACAATGCAAGATATGTGTG 59.025 40.000 0.00 0.00 0.00 3.82
1809 3214 5.653330 TGGATGAACAATGCAAGATATGTGT 59.347 36.000 0.00 0.00 33.02 3.72
1810 3215 6.139048 TGGATGAACAATGCAAGATATGTG 57.861 37.500 0.00 0.00 33.02 3.21
1811 3216 6.778834 TTGGATGAACAATGCAAGATATGT 57.221 33.333 0.00 0.00 41.22 2.29
1819 3233 2.964464 ACCAACTTGGATGAACAATGCA 59.036 40.909 15.14 0.00 40.96 3.96
1835 3249 3.736126 GCTCAGGGTATACACGTACCAAC 60.736 52.174 7.50 0.00 44.84 3.77
1837 3251 2.026641 GCTCAGGGTATACACGTACCA 58.973 52.381 7.50 0.00 44.84 3.25
1839 3253 3.703420 CAAGCTCAGGGTATACACGTAC 58.297 50.000 5.01 0.00 0.00 3.67
1842 3256 1.137086 AGCAAGCTCAGGGTATACACG 59.863 52.381 5.01 0.00 0.00 4.49
1843 3257 2.990066 AGCAAGCTCAGGGTATACAC 57.010 50.000 5.01 0.00 0.00 2.90
1850 3264 3.084039 TCACATAAAAGCAAGCTCAGGG 58.916 45.455 0.00 0.00 0.00 4.45
1861 3276 7.370836 GCGACGATAACAAAGATCACATAAAAG 59.629 37.037 0.00 0.00 0.00 2.27
1862 3277 7.177407 GCGACGATAACAAAGATCACATAAAA 58.823 34.615 0.00 0.00 0.00 1.52
1863 3278 6.237996 GGCGACGATAACAAAGATCACATAAA 60.238 38.462 0.00 0.00 0.00 1.40
1871 3286 1.485066 AGGGGCGACGATAACAAAGAT 59.515 47.619 0.00 0.00 0.00 2.40
1872 3287 0.899720 AGGGGCGACGATAACAAAGA 59.100 50.000 0.00 0.00 0.00 2.52
1873 3288 1.134788 AGAGGGGCGACGATAACAAAG 60.135 52.381 0.00 0.00 0.00 2.77
1874 3289 0.899720 AGAGGGGCGACGATAACAAA 59.100 50.000 0.00 0.00 0.00 2.83
1875 3290 0.899720 AAGAGGGGCGACGATAACAA 59.100 50.000 0.00 0.00 0.00 2.83
1876 3291 0.899720 AAAGAGGGGCGACGATAACA 59.100 50.000 0.00 0.00 0.00 2.41
1877 3292 1.134907 TGAAAGAGGGGCGACGATAAC 60.135 52.381 0.00 0.00 0.00 1.89
1878 3293 1.187974 TGAAAGAGGGGCGACGATAA 58.812 50.000 0.00 0.00 0.00 1.75
1879 3294 1.136305 CTTGAAAGAGGGGCGACGATA 59.864 52.381 0.00 0.00 0.00 2.92
1880 3295 0.108138 CTTGAAAGAGGGGCGACGAT 60.108 55.000 0.00 0.00 0.00 3.73
1881 3296 1.183030 TCTTGAAAGAGGGGCGACGA 61.183 55.000 0.00 0.00 0.00 4.20
1882 3297 0.108138 ATCTTGAAAGAGGGGCGACG 60.108 55.000 0.00 0.00 38.66 5.12
1883 3298 2.010497 GAATCTTGAAAGAGGGGCGAC 58.990 52.381 0.00 0.00 38.66 5.19
1884 3299 1.405526 CGAATCTTGAAAGAGGGGCGA 60.406 52.381 0.00 0.00 38.66 5.54
1885 3300 1.009829 CGAATCTTGAAAGAGGGGCG 58.990 55.000 0.00 0.00 38.66 6.13
1886 3301 2.115343 ACGAATCTTGAAAGAGGGGC 57.885 50.000 0.00 0.00 38.66 5.80
1887 3302 6.759497 ATTTTACGAATCTTGAAAGAGGGG 57.241 37.500 0.00 0.00 38.66 4.79
1888 3303 6.528072 GCAATTTTACGAATCTTGAAAGAGGG 59.472 38.462 0.00 0.00 38.66 4.30
1889 3304 7.272084 CAGCAATTTTACGAATCTTGAAAGAGG 59.728 37.037 0.00 0.00 38.66 3.69
1890 3305 7.201299 GCAGCAATTTTACGAATCTTGAAAGAG 60.201 37.037 0.00 0.00 38.66 2.85
1891 3306 6.582295 GCAGCAATTTTACGAATCTTGAAAGA 59.418 34.615 0.00 0.00 39.78 2.52
1892 3307 6.583806 AGCAGCAATTTTACGAATCTTGAAAG 59.416 34.615 0.00 0.00 0.00 2.62
1893 3308 6.363088 CAGCAGCAATTTTACGAATCTTGAAA 59.637 34.615 0.00 0.00 0.00 2.69
1894 3309 5.858049 CAGCAGCAATTTTACGAATCTTGAA 59.142 36.000 0.00 0.00 0.00 2.69
1895 3310 5.393124 CAGCAGCAATTTTACGAATCTTGA 58.607 37.500 0.00 0.00 0.00 3.02
1896 3311 4.560035 CCAGCAGCAATTTTACGAATCTTG 59.440 41.667 0.00 0.00 0.00 3.02
1897 3312 4.218417 ACCAGCAGCAATTTTACGAATCTT 59.782 37.500 0.00 0.00 0.00 2.40
1898 3313 3.758554 ACCAGCAGCAATTTTACGAATCT 59.241 39.130 0.00 0.00 0.00 2.40
1899 3314 4.096732 ACCAGCAGCAATTTTACGAATC 57.903 40.909 0.00 0.00 0.00 2.52
1900 3315 5.835113 ATACCAGCAGCAATTTTACGAAT 57.165 34.783 0.00 0.00 0.00 3.34
1901 3316 5.637006 AATACCAGCAGCAATTTTACGAA 57.363 34.783 0.00 0.00 0.00 3.85
1902 3317 5.392595 GGAAATACCAGCAGCAATTTTACGA 60.393 40.000 0.00 0.00 38.79 3.43
1903 3318 4.798387 GGAAATACCAGCAGCAATTTTACG 59.202 41.667 0.00 0.00 38.79 3.18
1904 3319 4.798387 CGGAAATACCAGCAGCAATTTTAC 59.202 41.667 0.00 0.00 38.90 2.01
1905 3320 4.676723 GCGGAAATACCAGCAGCAATTTTA 60.677 41.667 0.00 0.00 37.82 1.52
1906 3321 3.848726 CGGAAATACCAGCAGCAATTTT 58.151 40.909 0.00 0.00 38.90 1.82
1907 3322 2.417243 GCGGAAATACCAGCAGCAATTT 60.417 45.455 0.00 0.00 37.82 1.82
1908 3323 1.134946 GCGGAAATACCAGCAGCAATT 59.865 47.619 0.00 0.00 37.82 2.32
1909 3324 0.740737 GCGGAAATACCAGCAGCAAT 59.259 50.000 0.00 0.00 37.82 3.56
1910 3325 0.607762 TGCGGAAATACCAGCAGCAA 60.608 50.000 0.00 0.00 40.84 3.91
1911 3326 1.002746 TGCGGAAATACCAGCAGCA 60.003 52.632 0.00 0.00 40.84 4.41
1912 3327 1.026718 AGTGCGGAAATACCAGCAGC 61.027 55.000 0.00 0.00 44.03 5.25
1913 3328 0.729116 CAGTGCGGAAATACCAGCAG 59.271 55.000 0.00 0.00 44.03 4.24
1914 3329 1.305219 GCAGTGCGGAAATACCAGCA 61.305 55.000 0.00 0.00 42.38 4.41
1915 3330 1.026718 AGCAGTGCGGAAATACCAGC 61.027 55.000 10.00 0.00 38.90 4.85
1916 3331 0.729116 CAGCAGTGCGGAAATACCAG 59.271 55.000 9.94 0.00 38.90 4.00
1917 3332 0.036164 ACAGCAGTGCGGAAATACCA 59.964 50.000 22.48 0.00 38.90 3.25
1918 3333 1.165270 AACAGCAGTGCGGAAATACC 58.835 50.000 22.48 0.00 0.00 2.73
1919 3334 2.989422 AAACAGCAGTGCGGAAATAC 57.011 45.000 22.48 0.00 0.00 1.89
1920 3335 4.069304 AGTAAAACAGCAGTGCGGAAATA 58.931 39.130 22.48 8.17 0.00 1.40
1921 3336 2.884639 AGTAAAACAGCAGTGCGGAAAT 59.115 40.909 22.48 9.11 0.00 2.17
1922 3337 2.032799 CAGTAAAACAGCAGTGCGGAAA 59.967 45.455 22.48 1.21 0.00 3.13
1923 3338 1.601903 CAGTAAAACAGCAGTGCGGAA 59.398 47.619 22.48 1.56 0.00 4.30
1924 3339 1.202592 TCAGTAAAACAGCAGTGCGGA 60.203 47.619 22.48 0.00 0.00 5.54
1925 3340 1.069906 GTCAGTAAAACAGCAGTGCGG 60.070 52.381 14.06 14.06 0.00 5.69
1926 3341 1.597195 TGTCAGTAAAACAGCAGTGCG 59.403 47.619 10.00 7.44 0.00 5.34
1927 3342 3.259207 CTGTCAGTAAAACAGCAGTGC 57.741 47.619 7.13 7.13 37.88 4.40
1933 3348 2.221169 TGCCAGCTGTCAGTAAAACAG 58.779 47.619 13.81 0.00 45.57 3.16
1934 3349 2.340210 TGCCAGCTGTCAGTAAAACA 57.660 45.000 13.81 0.00 0.00 2.83
1935 3350 3.077359 AGATGCCAGCTGTCAGTAAAAC 58.923 45.455 13.81 0.00 0.00 2.43
1936 3351 3.244526 TGAGATGCCAGCTGTCAGTAAAA 60.245 43.478 13.81 0.00 0.00 1.52
1937 3352 2.302733 TGAGATGCCAGCTGTCAGTAAA 59.697 45.455 13.81 0.00 0.00 2.01
1938 3353 1.901833 TGAGATGCCAGCTGTCAGTAA 59.098 47.619 13.81 0.00 0.00 2.24
1939 3354 1.560505 TGAGATGCCAGCTGTCAGTA 58.439 50.000 13.81 0.00 0.00 2.74
1940 3355 0.910338 ATGAGATGCCAGCTGTCAGT 59.090 50.000 13.81 0.00 0.00 3.41
1941 3356 2.904697 TATGAGATGCCAGCTGTCAG 57.095 50.000 13.81 0.00 0.00 3.51
1942 3357 2.970640 AGATATGAGATGCCAGCTGTCA 59.029 45.455 13.81 6.39 0.00 3.58
1943 3358 3.244146 ACAGATATGAGATGCCAGCTGTC 60.244 47.826 13.81 0.00 30.22 3.51
1944 3359 2.704596 ACAGATATGAGATGCCAGCTGT 59.295 45.455 13.81 0.00 0.00 4.40
1945 3360 3.067833 CACAGATATGAGATGCCAGCTG 58.932 50.000 6.78 6.78 0.00 4.24
1946 3361 2.704596 ACACAGATATGAGATGCCAGCT 59.295 45.455 0.00 0.00 0.00 4.24
1947 3362 3.123157 ACACAGATATGAGATGCCAGC 57.877 47.619 0.00 0.00 0.00 4.85
1948 3363 6.094464 TCAAAAACACAGATATGAGATGCCAG 59.906 38.462 0.00 0.00 0.00 4.85
1949 3364 5.945191 TCAAAAACACAGATATGAGATGCCA 59.055 36.000 0.00 0.00 0.00 4.92
1950 3365 6.441093 TCAAAAACACAGATATGAGATGCC 57.559 37.500 0.00 0.00 0.00 4.40
1951 3366 6.916387 CCATCAAAAACACAGATATGAGATGC 59.084 38.462 0.00 0.00 0.00 3.91
1952 3367 6.916387 GCCATCAAAAACACAGATATGAGATG 59.084 38.462 0.00 0.00 0.00 2.90
1953 3368 6.832384 AGCCATCAAAAACACAGATATGAGAT 59.168 34.615 0.00 0.00 0.00 2.75
1954 3369 6.094464 CAGCCATCAAAAACACAGATATGAGA 59.906 38.462 0.00 0.00 0.00 3.27
1955 3370 6.263344 CAGCCATCAAAAACACAGATATGAG 58.737 40.000 0.00 0.00 0.00 2.90
1956 3371 5.393352 GCAGCCATCAAAAACACAGATATGA 60.393 40.000 0.00 0.00 0.00 2.15
1957 3372 4.802039 GCAGCCATCAAAAACACAGATATG 59.198 41.667 0.00 0.00 0.00 1.78
1958 3373 4.142093 GGCAGCCATCAAAAACACAGATAT 60.142 41.667 6.55 0.00 0.00 1.63
1959 3374 3.193267 GGCAGCCATCAAAAACACAGATA 59.807 43.478 6.55 0.00 0.00 1.98
1960 3375 2.028748 GGCAGCCATCAAAAACACAGAT 60.029 45.455 6.55 0.00 0.00 2.90
1961 3376 1.340889 GGCAGCCATCAAAAACACAGA 59.659 47.619 6.55 0.00 0.00 3.41
1962 3377 1.068895 TGGCAGCCATCAAAAACACAG 59.931 47.619 11.22 0.00 0.00 3.66
1963 3378 1.117994 TGGCAGCCATCAAAAACACA 58.882 45.000 11.22 0.00 0.00 3.72
1964 3379 2.070783 CATGGCAGCCATCAAAAACAC 58.929 47.619 25.23 0.00 43.15 3.32
1965 3380 1.608542 GCATGGCAGCCATCAAAAACA 60.609 47.619 25.23 0.00 43.15 2.83
1966 3381 1.081094 GCATGGCAGCCATCAAAAAC 58.919 50.000 25.23 6.17 43.15 2.43
1967 3382 0.390078 CGCATGGCAGCCATCAAAAA 60.390 50.000 25.23 0.00 43.15 1.94
1968 3383 1.215912 CGCATGGCAGCCATCAAAA 59.784 52.632 25.23 0.00 43.15 2.44
1969 3384 1.249469 TTCGCATGGCAGCCATCAAA 61.249 50.000 25.23 15.22 43.15 2.69
1970 3385 1.249469 TTTCGCATGGCAGCCATCAA 61.249 50.000 25.23 14.20 43.15 2.57
1971 3386 1.038681 ATTTCGCATGGCAGCCATCA 61.039 50.000 25.23 8.55 43.15 3.07
1972 3387 0.596600 CATTTCGCATGGCAGCCATC 60.597 55.000 25.23 17.21 43.15 3.51
1973 3388 1.324740 ACATTTCGCATGGCAGCCAT 61.325 50.000 22.36 22.36 46.37 4.40
1974 3389 1.936436 GACATTTCGCATGGCAGCCA 61.936 55.000 18.99 18.99 38.19 4.75
1975 3390 1.226773 GACATTTCGCATGGCAGCC 60.227 57.895 3.66 3.66 0.00 4.85
1976 3391 0.109179 TTGACATTTCGCATGGCAGC 60.109 50.000 3.49 0.00 38.44 5.25
1977 3392 2.098607 AGATTGACATTTCGCATGGCAG 59.901 45.455 3.49 0.00 38.44 4.85
1978 3393 2.093890 AGATTGACATTTCGCATGGCA 58.906 42.857 0.00 0.00 34.80 4.92
1979 3394 2.456989 CAGATTGACATTTCGCATGGC 58.543 47.619 0.00 0.00 0.00 4.40
1980 3395 2.424601 ACCAGATTGACATTTCGCATGG 59.575 45.455 0.00 0.00 0.00 3.66
1981 3396 3.119743 ACACCAGATTGACATTTCGCATG 60.120 43.478 0.00 0.00 0.00 4.06
1982 3397 3.084039 ACACCAGATTGACATTTCGCAT 58.916 40.909 0.00 0.00 0.00 4.73
1983 3398 2.226200 CACACCAGATTGACATTTCGCA 59.774 45.455 0.00 0.00 0.00 5.10
1984 3399 2.414559 CCACACCAGATTGACATTTCGC 60.415 50.000 0.00 0.00 0.00 4.70
1985 3400 2.813754 ACCACACCAGATTGACATTTCG 59.186 45.455 0.00 0.00 0.00 3.46
1986 3401 3.612479 GCACCACACCAGATTGACATTTC 60.612 47.826 0.00 0.00 0.00 2.17
1987 3402 2.297033 GCACCACACCAGATTGACATTT 59.703 45.455 0.00 0.00 0.00 2.32
1988 3403 1.888512 GCACCACACCAGATTGACATT 59.111 47.619 0.00 0.00 0.00 2.71
1989 3404 1.538047 GCACCACACCAGATTGACAT 58.462 50.000 0.00 0.00 0.00 3.06
1990 3405 0.537143 GGCACCACACCAGATTGACA 60.537 55.000 0.00 0.00 0.00 3.58
1991 3406 0.250901 AGGCACCACACCAGATTGAC 60.251 55.000 0.00 0.00 0.00 3.18
1992 3407 0.250858 CAGGCACCACACCAGATTGA 60.251 55.000 0.00 0.00 0.00 2.57
1993 3408 1.870055 GCAGGCACCACACCAGATTG 61.870 60.000 0.00 0.00 0.00 2.67
1994 3409 1.604593 GCAGGCACCACACCAGATT 60.605 57.895 0.00 0.00 0.00 2.40
1995 3410 2.034687 GCAGGCACCACACCAGAT 59.965 61.111 0.00 0.00 0.00 2.90
1996 3411 4.624364 CGCAGGCACCACACCAGA 62.624 66.667 0.00 0.00 0.00 3.86
2008 3423 4.537433 GCAGAGGTAGGGCGCAGG 62.537 72.222 10.83 0.00 0.00 4.85
2009 3424 2.599645 ATTGCAGAGGTAGGGCGCAG 62.600 60.000 10.83 0.00 33.48 5.18
2010 3425 2.669133 ATTGCAGAGGTAGGGCGCA 61.669 57.895 10.83 0.00 0.00 6.09
2011 3426 2.182842 CATTGCAGAGGTAGGGCGC 61.183 63.158 0.00 0.00 0.00 6.53
2012 3427 1.091771 CACATTGCAGAGGTAGGGCG 61.092 60.000 0.00 0.00 0.00 6.13
2013 3428 0.035056 ACACATTGCAGAGGTAGGGC 60.035 55.000 0.00 0.00 0.00 5.19
2014 3429 1.278985 TGACACATTGCAGAGGTAGGG 59.721 52.381 0.00 0.00 0.00 3.53
2015 3430 2.768253 TGACACATTGCAGAGGTAGG 57.232 50.000 0.00 0.00 0.00 3.18
2016 3431 4.134379 AGATGACACATTGCAGAGGTAG 57.866 45.455 0.00 0.00 0.00 3.18
2017 3432 4.558226 AAGATGACACATTGCAGAGGTA 57.442 40.909 0.00 0.00 0.00 3.08
2018 3433 3.430042 AAGATGACACATTGCAGAGGT 57.570 42.857 0.00 0.00 0.00 3.85
2019 3434 3.672511 GCAAAGATGACACATTGCAGAGG 60.673 47.826 13.75 0.00 45.61 3.69
2020 3435 3.499048 GCAAAGATGACACATTGCAGAG 58.501 45.455 13.75 0.00 45.61 3.35
2021 3436 3.564235 GCAAAGATGACACATTGCAGA 57.436 42.857 13.75 0.00 45.61 4.26
2024 3439 5.600908 AAATTGCAAAGATGACACATTGC 57.399 34.783 1.71 12.39 46.29 3.56
2025 3440 5.403166 ACGAAATTGCAAAGATGACACATTG 59.597 36.000 1.71 0.00 0.00 2.82
2026 3441 5.403166 CACGAAATTGCAAAGATGACACATT 59.597 36.000 1.71 0.00 0.00 2.71
2027 3442 4.919168 CACGAAATTGCAAAGATGACACAT 59.081 37.500 1.71 0.00 0.00 3.21
2028 3443 4.289342 CACGAAATTGCAAAGATGACACA 58.711 39.130 1.71 0.00 0.00 3.72
2029 3444 3.670055 CCACGAAATTGCAAAGATGACAC 59.330 43.478 1.71 0.00 0.00 3.67
2030 3445 3.567585 TCCACGAAATTGCAAAGATGACA 59.432 39.130 1.71 0.00 0.00 3.58
2031 3446 4.159377 TCCACGAAATTGCAAAGATGAC 57.841 40.909 1.71 0.00 0.00 3.06
2032 3447 4.701651 AGATCCACGAAATTGCAAAGATGA 59.298 37.500 1.71 0.00 0.00 2.92
2033 3448 4.990257 AGATCCACGAAATTGCAAAGATG 58.010 39.130 1.71 0.00 0.00 2.90
2034 3449 5.649782 AAGATCCACGAAATTGCAAAGAT 57.350 34.783 1.71 0.00 0.00 2.40
2035 3450 6.567687 TTAAGATCCACGAAATTGCAAAGA 57.432 33.333 1.71 0.00 0.00 2.52
2036 3451 5.287035 GCTTAAGATCCACGAAATTGCAAAG 59.713 40.000 6.67 0.00 0.00 2.77
2037 3452 5.160641 GCTTAAGATCCACGAAATTGCAAA 58.839 37.500 6.67 0.00 0.00 3.68
2038 3453 4.217334 TGCTTAAGATCCACGAAATTGCAA 59.783 37.500 6.67 0.00 0.00 4.08
2039 3454 3.755905 TGCTTAAGATCCACGAAATTGCA 59.244 39.130 6.67 0.00 0.00 4.08
2040 3455 4.094887 TCTGCTTAAGATCCACGAAATTGC 59.905 41.667 6.67 0.00 0.00 3.56
2041 3456 5.801350 TCTGCTTAAGATCCACGAAATTG 57.199 39.130 6.67 0.00 0.00 2.32
2042 3457 6.173339 TCTTCTGCTTAAGATCCACGAAATT 58.827 36.000 6.67 0.00 33.93 1.82
2043 3458 5.734720 TCTTCTGCTTAAGATCCACGAAAT 58.265 37.500 6.67 0.00 33.93 2.17
2044 3459 5.147330 TCTTCTGCTTAAGATCCACGAAA 57.853 39.130 6.67 0.00 33.93 3.46
2045 3460 4.220821 ACTCTTCTGCTTAAGATCCACGAA 59.779 41.667 6.67 1.23 35.04 3.85
2046 3461 3.764434 ACTCTTCTGCTTAAGATCCACGA 59.236 43.478 6.67 0.00 35.04 4.35
2047 3462 3.862267 CACTCTTCTGCTTAAGATCCACG 59.138 47.826 6.67 0.00 35.04 4.94
2048 3463 4.826556 ACACTCTTCTGCTTAAGATCCAC 58.173 43.478 6.67 0.00 35.04 4.02
2049 3464 5.221722 ACAACACTCTTCTGCTTAAGATCCA 60.222 40.000 6.67 0.00 35.04 3.41
2050 3465 5.241662 ACAACACTCTTCTGCTTAAGATCC 58.758 41.667 6.67 0.00 35.04 3.36
2051 3466 6.793492 AACAACACTCTTCTGCTTAAGATC 57.207 37.500 6.67 0.00 35.04 2.75
2052 3467 6.016777 CCAAACAACACTCTTCTGCTTAAGAT 60.017 38.462 6.67 0.00 35.04 2.40
2053 3468 5.296780 CCAAACAACACTCTTCTGCTTAAGA 59.703 40.000 6.67 2.08 34.39 2.10
2054 3469 5.066505 ACCAAACAACACTCTTCTGCTTAAG 59.933 40.000 0.00 0.00 0.00 1.85
2055 3470 4.947388 ACCAAACAACACTCTTCTGCTTAA 59.053 37.500 0.00 0.00 0.00 1.85
2056 3471 4.523083 ACCAAACAACACTCTTCTGCTTA 58.477 39.130 0.00 0.00 0.00 3.09
2057 3472 3.356290 ACCAAACAACACTCTTCTGCTT 58.644 40.909 0.00 0.00 0.00 3.91
2058 3473 3.004752 ACCAAACAACACTCTTCTGCT 57.995 42.857 0.00 0.00 0.00 4.24
2059 3474 3.003378 GGTACCAAACAACACTCTTCTGC 59.997 47.826 7.15 0.00 0.00 4.26
2060 3475 4.813296 GGTACCAAACAACACTCTTCTG 57.187 45.455 7.15 0.00 0.00 3.02
2076 3491 5.632244 ACGTTGATTACAAATTGGGTACC 57.368 39.130 2.17 2.17 43.52 3.34
2077 3492 6.253013 GCTACGTTGATTACAAATTGGGTAC 58.747 40.000 0.00 0.00 37.77 3.34
2078 3493 5.354792 GGCTACGTTGATTACAAATTGGGTA 59.645 40.000 0.00 0.00 37.77 3.69
2079 3494 4.157105 GGCTACGTTGATTACAAATTGGGT 59.843 41.667 0.00 0.00 37.77 4.51
2080 3495 4.398044 AGGCTACGTTGATTACAAATTGGG 59.602 41.667 0.00 0.00 37.77 4.12
2081 3496 5.106317 ACAGGCTACGTTGATTACAAATTGG 60.106 40.000 0.00 0.00 37.77 3.16
2082 3497 5.794945 CACAGGCTACGTTGATTACAAATTG 59.205 40.000 0.00 0.00 37.77 2.32
2083 3498 5.703592 TCACAGGCTACGTTGATTACAAATT 59.296 36.000 0.00 0.00 37.77 1.82
2084 3499 5.242434 TCACAGGCTACGTTGATTACAAAT 58.758 37.500 0.00 0.00 37.77 2.32
2085 3500 4.633175 TCACAGGCTACGTTGATTACAAA 58.367 39.130 0.00 0.00 37.77 2.83
2086 3501 4.260139 TCACAGGCTACGTTGATTACAA 57.740 40.909 0.00 0.00 0.00 2.41
2087 3502 3.945981 TCACAGGCTACGTTGATTACA 57.054 42.857 0.00 0.00 0.00 2.41
2088 3503 3.802685 GGATCACAGGCTACGTTGATTAC 59.197 47.826 0.00 0.00 0.00 1.89
2089 3504 3.449377 TGGATCACAGGCTACGTTGATTA 59.551 43.478 0.00 0.00 0.00 1.75
2090 3505 2.236146 TGGATCACAGGCTACGTTGATT 59.764 45.455 0.00 0.00 0.00 2.57
2091 3506 1.831106 TGGATCACAGGCTACGTTGAT 59.169 47.619 0.00 0.00 0.00 2.57
2092 3507 1.262417 TGGATCACAGGCTACGTTGA 58.738 50.000 0.00 0.00 0.00 3.18
2093 3508 2.315925 ATGGATCACAGGCTACGTTG 57.684 50.000 0.00 0.00 0.00 4.10
2094 3509 4.380531 CATTATGGATCACAGGCTACGTT 58.619 43.478 0.00 0.00 0.00 3.99
2095 3510 3.244215 CCATTATGGATCACAGGCTACGT 60.244 47.826 5.05 0.00 40.96 3.57
2096 3511 3.329386 CCATTATGGATCACAGGCTACG 58.671 50.000 5.05 0.00 40.96 3.51
2097 3512 3.679389 CCCATTATGGATCACAGGCTAC 58.321 50.000 13.63 0.00 40.96 3.58
2098 3513 2.040278 GCCCATTATGGATCACAGGCTA 59.960 50.000 13.63 0.00 40.96 3.93
2099 3514 1.202976 GCCCATTATGGATCACAGGCT 60.203 52.381 13.63 0.00 40.96 4.58
2100 3515 1.202976 AGCCCATTATGGATCACAGGC 60.203 52.381 13.63 5.56 40.96 4.85
2101 3516 2.374504 AGAGCCCATTATGGATCACAGG 59.625 50.000 13.63 0.00 43.36 4.00
2102 3517 3.181447 ACAGAGCCCATTATGGATCACAG 60.181 47.826 13.63 7.24 43.36 3.66
2103 3518 2.779430 ACAGAGCCCATTATGGATCACA 59.221 45.455 13.63 0.00 43.36 3.58
2104 3519 3.498774 ACAGAGCCCATTATGGATCAC 57.501 47.619 13.63 3.10 43.36 3.06
2105 3520 3.718434 AGAACAGAGCCCATTATGGATCA 59.282 43.478 13.63 0.00 43.36 2.92
2106 3521 4.363991 AGAACAGAGCCCATTATGGATC 57.636 45.455 13.63 10.25 40.96 3.36
2107 3522 4.166725 TGAAGAACAGAGCCCATTATGGAT 59.833 41.667 13.63 0.25 40.96 3.41
2108 3523 3.523157 TGAAGAACAGAGCCCATTATGGA 59.477 43.478 13.63 0.00 40.96 3.41
2109 3524 3.889815 TGAAGAACAGAGCCCATTATGG 58.110 45.455 3.85 3.85 37.25 2.74
2110 3525 6.461110 AAATGAAGAACAGAGCCCATTATG 57.539 37.500 0.00 0.00 0.00 1.90
2111 3526 7.615365 TGTAAAATGAAGAACAGAGCCCATTAT 59.385 33.333 0.00 0.00 0.00 1.28
2112 3527 6.945435 TGTAAAATGAAGAACAGAGCCCATTA 59.055 34.615 0.00 0.00 0.00 1.90
2113 3528 5.774690 TGTAAAATGAAGAACAGAGCCCATT 59.225 36.000 0.00 0.00 0.00 3.16
2114 3529 5.183904 GTGTAAAATGAAGAACAGAGCCCAT 59.816 40.000 0.00 0.00 0.00 4.00
2115 3530 4.518970 GTGTAAAATGAAGAACAGAGCCCA 59.481 41.667 0.00 0.00 0.00 5.36
2116 3531 4.762251 AGTGTAAAATGAAGAACAGAGCCC 59.238 41.667 0.00 0.00 0.00 5.19
2117 3532 5.703130 AGAGTGTAAAATGAAGAACAGAGCC 59.297 40.000 0.00 0.00 0.00 4.70
2118 3533 6.348050 CCAGAGTGTAAAATGAAGAACAGAGC 60.348 42.308 0.00 0.00 0.00 4.09
2119 3534 6.348050 GCCAGAGTGTAAAATGAAGAACAGAG 60.348 42.308 0.00 0.00 0.00 3.35
2120 3535 5.470098 GCCAGAGTGTAAAATGAAGAACAGA 59.530 40.000 0.00 0.00 0.00 3.41
2121 3536 5.239306 TGCCAGAGTGTAAAATGAAGAACAG 59.761 40.000 0.00 0.00 0.00 3.16
2122 3537 5.008613 GTGCCAGAGTGTAAAATGAAGAACA 59.991 40.000 0.00 0.00 0.00 3.18
2123 3538 5.452777 GTGCCAGAGTGTAAAATGAAGAAC 58.547 41.667 0.00 0.00 0.00 3.01
2124 3539 4.518970 GGTGCCAGAGTGTAAAATGAAGAA 59.481 41.667 0.00 0.00 0.00 2.52
2125 3540 4.072131 GGTGCCAGAGTGTAAAATGAAGA 58.928 43.478 0.00 0.00 0.00 2.87
2126 3541 3.820467 TGGTGCCAGAGTGTAAAATGAAG 59.180 43.478 0.00 0.00 0.00 3.02
2127 3542 3.568007 GTGGTGCCAGAGTGTAAAATGAA 59.432 43.478 0.00 0.00 0.00 2.57
2128 3543 3.146066 GTGGTGCCAGAGTGTAAAATGA 58.854 45.455 0.00 0.00 0.00 2.57
2129 3544 2.884012 TGTGGTGCCAGAGTGTAAAATG 59.116 45.455 0.00 0.00 0.00 2.32
2130 3545 2.884639 GTGTGGTGCCAGAGTGTAAAAT 59.115 45.455 0.00 0.00 0.00 1.82
2131 3546 2.294074 GTGTGGTGCCAGAGTGTAAAA 58.706 47.619 0.00 0.00 0.00 1.52
2132 3547 1.476110 GGTGTGGTGCCAGAGTGTAAA 60.476 52.381 0.00 0.00 0.00 2.01
2133 3548 0.107831 GGTGTGGTGCCAGAGTGTAA 59.892 55.000 0.00 0.00 0.00 2.41
2134 3549 1.051556 TGGTGTGGTGCCAGAGTGTA 61.052 55.000 0.00 0.00 0.00 2.90
2135 3550 2.374525 TGGTGTGGTGCCAGAGTGT 61.375 57.895 0.00 0.00 0.00 3.55
2136 3551 2.510411 TGGTGTGGTGCCAGAGTG 59.490 61.111 0.00 0.00 0.00 3.51
2141 3556 0.105760 ATTTTCCTGGTGTGGTGCCA 60.106 50.000 0.00 0.00 34.42 4.92
2142 3557 1.544246 GTATTTTCCTGGTGTGGTGCC 59.456 52.381 0.00 0.00 0.00 5.01
2143 3558 2.235016 TGTATTTTCCTGGTGTGGTGC 58.765 47.619 0.00 0.00 0.00 5.01
2144 3559 3.255642 CCTTGTATTTTCCTGGTGTGGTG 59.744 47.826 0.00 0.00 0.00 4.17
2145 3560 3.139397 TCCTTGTATTTTCCTGGTGTGGT 59.861 43.478 0.00 0.00 0.00 4.16
2146 3561 3.761897 TCCTTGTATTTTCCTGGTGTGG 58.238 45.455 0.00 0.00 0.00 4.17
2147 3562 5.782893 TTTCCTTGTATTTTCCTGGTGTG 57.217 39.130 0.00 0.00 0.00 3.82
2148 3563 7.728532 ACTTATTTCCTTGTATTTTCCTGGTGT 59.271 33.333 0.00 0.00 0.00 4.16
2149 3564 8.028938 CACTTATTTCCTTGTATTTTCCTGGTG 58.971 37.037 0.00 0.00 0.00 4.17
2150 3565 7.309805 GCACTTATTTCCTTGTATTTTCCTGGT 60.310 37.037 0.00 0.00 0.00 4.00
2151 3566 7.035612 GCACTTATTTCCTTGTATTTTCCTGG 58.964 38.462 0.00 0.00 0.00 4.45
2152 3567 7.601856 TGCACTTATTTCCTTGTATTTTCCTG 58.398 34.615 0.00 0.00 0.00 3.86
2153 3568 7.669722 TCTGCACTTATTTCCTTGTATTTTCCT 59.330 33.333 0.00 0.00 0.00 3.36
2154 3569 7.826690 TCTGCACTTATTTCCTTGTATTTTCC 58.173 34.615 0.00 0.00 0.00 3.13
2155 3570 7.486232 GCTCTGCACTTATTTCCTTGTATTTTC 59.514 37.037 0.00 0.00 0.00 2.29
2156 3571 7.315890 GCTCTGCACTTATTTCCTTGTATTTT 58.684 34.615 0.00 0.00 0.00 1.82
2157 3572 6.403636 CGCTCTGCACTTATTTCCTTGTATTT 60.404 38.462 0.00 0.00 0.00 1.40
2158 3573 5.065218 CGCTCTGCACTTATTTCCTTGTATT 59.935 40.000 0.00 0.00 0.00 1.89
2159 3574 4.572389 CGCTCTGCACTTATTTCCTTGTAT 59.428 41.667 0.00 0.00 0.00 2.29
2160 3575 3.932710 CGCTCTGCACTTATTTCCTTGTA 59.067 43.478 0.00 0.00 0.00 2.41
2161 3576 2.744202 CGCTCTGCACTTATTTCCTTGT 59.256 45.455 0.00 0.00 0.00 3.16
2162 3577 2.744202 ACGCTCTGCACTTATTTCCTTG 59.256 45.455 0.00 0.00 0.00 3.61
2163 3578 3.059352 ACGCTCTGCACTTATTTCCTT 57.941 42.857 0.00 0.00 0.00 3.36
2164 3579 2.770164 ACGCTCTGCACTTATTTCCT 57.230 45.000 0.00 0.00 0.00 3.36
2165 3580 3.831715 AAACGCTCTGCACTTATTTCC 57.168 42.857 0.00 0.00 0.00 3.13
2166 3581 3.914364 CCAAAACGCTCTGCACTTATTTC 59.086 43.478 0.00 0.00 0.00 2.17
2167 3582 3.568007 TCCAAAACGCTCTGCACTTATTT 59.432 39.130 0.00 0.00 0.00 1.40
2168 3583 3.146066 TCCAAAACGCTCTGCACTTATT 58.854 40.909 0.00 0.00 0.00 1.40
2169 3584 2.778299 TCCAAAACGCTCTGCACTTAT 58.222 42.857 0.00 0.00 0.00 1.73
2170 3585 2.248280 TCCAAAACGCTCTGCACTTA 57.752 45.000 0.00 0.00 0.00 2.24
2171 3586 1.334869 CTTCCAAAACGCTCTGCACTT 59.665 47.619 0.00 0.00 0.00 3.16
2172 3587 0.947244 CTTCCAAAACGCTCTGCACT 59.053 50.000 0.00 0.00 0.00 4.40
2173 3588 0.661483 GCTTCCAAAACGCTCTGCAC 60.661 55.000 0.00 0.00 0.00 4.57
2174 3589 0.819259 AGCTTCCAAAACGCTCTGCA 60.819 50.000 0.00 0.00 0.00 4.41
2175 3590 0.386478 CAGCTTCCAAAACGCTCTGC 60.386 55.000 0.00 0.00 0.00 4.26
2176 3591 0.386478 GCAGCTTCCAAAACGCTCTG 60.386 55.000 0.00 0.00 0.00 3.35
2177 3592 0.819259 TGCAGCTTCCAAAACGCTCT 60.819 50.000 0.00 0.00 0.00 4.09
2178 3593 0.386478 CTGCAGCTTCCAAAACGCTC 60.386 55.000 0.00 0.00 0.00 5.03
2179 3594 1.656441 CTGCAGCTTCCAAAACGCT 59.344 52.632 0.00 0.00 0.00 5.07
2180 3595 2.018324 GCTGCAGCTTCCAAAACGC 61.018 57.895 31.33 0.18 38.21 4.84
2181 3596 4.233408 GCTGCAGCTTCCAAAACG 57.767 55.556 31.33 0.00 38.21 3.60
2197 3612 4.695231 CAGTGCCAGCGTGCAAGC 62.695 66.667 17.43 17.43 44.11 4.01
2198 3613 2.722130 GAACAGTGCCAGCGTGCAAG 62.722 60.000 4.72 0.00 44.11 4.01
2199 3614 2.828095 AACAGTGCCAGCGTGCAA 60.828 55.556 4.72 0.00 44.11 4.08
2200 3615 3.279116 GAACAGTGCCAGCGTGCA 61.279 61.111 0.00 0.00 39.37 4.57
2201 3616 2.449556 GAAGAACAGTGCCAGCGTGC 62.450 60.000 0.00 0.00 0.00 5.34
2202 3617 1.571460 GAAGAACAGTGCCAGCGTG 59.429 57.895 0.00 0.00 0.00 5.34
2203 3618 1.956170 CGAAGAACAGTGCCAGCGT 60.956 57.895 0.00 0.00 0.00 5.07
2204 3619 1.498865 AACGAAGAACAGTGCCAGCG 61.499 55.000 0.00 0.00 0.00 5.18
2205 3620 0.663153 AAACGAAGAACAGTGCCAGC 59.337 50.000 0.00 0.00 0.00 4.85
2206 3621 2.719798 CAAAACGAAGAACAGTGCCAG 58.280 47.619 0.00 0.00 0.00 4.85
2207 3622 1.202245 GCAAAACGAAGAACAGTGCCA 60.202 47.619 0.00 0.00 0.00 4.92
2208 3623 1.202245 TGCAAAACGAAGAACAGTGCC 60.202 47.619 0.00 0.00 0.00 5.01
2209 3624 1.846175 GTGCAAAACGAAGAACAGTGC 59.154 47.619 0.00 0.00 0.00 4.40
2232 3647 0.682852 ACGTGGCTAACTGTAAGGCA 59.317 50.000 0.00 0.00 46.15 4.75
2233 3648 1.076332 CACGTGGCTAACTGTAAGGC 58.924 55.000 7.95 0.00 39.30 4.35
2234 3649 1.076332 GCACGTGGCTAACTGTAAGG 58.924 55.000 18.88 0.00 37.77 2.69
2235 3650 0.713883 CGCACGTGGCTAACTGTAAG 59.286 55.000 18.88 0.00 41.67 2.34
2236 3651 0.032403 ACGCACGTGGCTAACTGTAA 59.968 50.000 18.88 0.00 41.67 2.41
2237 3652 0.387622 GACGCACGTGGCTAACTGTA 60.388 55.000 18.88 0.00 41.67 2.74
2238 3653 1.663702 GACGCACGTGGCTAACTGT 60.664 57.895 18.88 2.73 41.67 3.55
2239 3654 1.617755 CTGACGCACGTGGCTAACTG 61.618 60.000 18.88 0.00 41.67 3.16
2240 3655 1.372997 CTGACGCACGTGGCTAACT 60.373 57.895 18.88 0.00 41.67 2.24
2241 3656 1.663702 ACTGACGCACGTGGCTAAC 60.664 57.895 18.88 0.00 41.67 2.34
2242 3657 1.663388 CACTGACGCACGTGGCTAA 60.663 57.895 18.88 0.00 41.67 3.09
2243 3658 2.049526 CACTGACGCACGTGGCTA 60.050 61.111 18.88 0.00 41.67 3.93
2244 3659 3.733344 AACACTGACGCACGTGGCT 62.733 57.895 18.88 0.18 41.67 4.75
2245 3660 3.223435 GAACACTGACGCACGTGGC 62.223 63.158 18.88 8.78 35.51 5.01
2246 3661 2.594962 GGAACACTGACGCACGTGG 61.595 63.158 18.88 10.05 35.51 4.94
2247 3662 1.880796 TGGAACACTGACGCACGTG 60.881 57.895 12.28 12.28 37.18 4.49
2248 3663 2.497293 TGGAACACTGACGCACGT 59.503 55.556 0.00 0.00 0.00 4.49


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.