Multiple sequence alignment - TraesCS1B01G452600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G452600 chr1B 100.000 2483 0 0 1 2483 669253378 669255860 0.000000e+00 4586.0
1 TraesCS1B01G452600 chr1B 94.416 1379 61 5 549 1925 669246472 669247836 0.000000e+00 2106.0
2 TraesCS1B01G452600 chr1B 96.283 538 19 1 3 540 669245827 669246363 0.000000e+00 881.0
3 TraesCS1B01G452600 chr6D 94.218 1401 53 14 549 1925 206557152 206555756 0.000000e+00 2113.0
4 TraesCS1B01G452600 chr6D 97.584 538 12 1 3 540 206557797 206557261 0.000000e+00 920.0
5 TraesCS1B01G452600 chr6A 93.894 1392 65 13 549 1925 435768924 435767538 0.000000e+00 2082.0
6 TraesCS1B01G452600 chr6A 97.584 538 12 1 3 540 435769569 435769033 0.000000e+00 920.0
7 TraesCS1B01G452600 chr6A 91.873 566 25 12 1378 1925 290257729 290258291 0.000000e+00 771.0
8 TraesCS1B01G452600 chr7A 93.822 1392 66 13 549 1925 15531804 15533190 0.000000e+00 2076.0
9 TraesCS1B01G452600 chr7A 97.584 538 12 1 3 540 15531159 15531695 0.000000e+00 920.0
10 TraesCS1B01G452600 chr7A 81.739 115 20 1 1998 2111 730565692 730565806 7.310000e-16 95.3
11 TraesCS1B01G452600 chr4A 93.581 1402 61 13 549 1925 314681855 314683252 0.000000e+00 2063.0
12 TraesCS1B01G452600 chr3A 92.918 1398 74 12 549 1925 600336352 600337745 0.000000e+00 2010.0
13 TraesCS1B01G452600 chr3A 93.270 1055 52 12 886 1925 313528510 313527460 0.000000e+00 1537.0
14 TraesCS1B01G452600 chr3A 97.584 538 12 1 3 540 313529865 313529329 0.000000e+00 920.0
15 TraesCS1B01G452600 chr3A 96.283 538 19 1 3 540 600335707 600336243 0.000000e+00 881.0
16 TraesCS1B01G452600 chr7B 91.053 1330 87 18 549 1857 78311614 78312932 0.000000e+00 1768.0
17 TraesCS1B01G452600 chr7B 93.702 1048 54 3 549 1596 109934587 109935622 0.000000e+00 1559.0
18 TraesCS1B01G452600 chr7B 95.167 538 25 1 3 540 109933942 109934478 0.000000e+00 848.0
19 TraesCS1B01G452600 chr7B 94.052 538 31 1 3 540 78310969 78311505 0.000000e+00 815.0
20 TraesCS1B01G452600 chr4B 90.383 1331 81 19 550 1857 653647962 653646656 0.000000e+00 1705.0
21 TraesCS1B01G452600 chr4B 95.167 538 25 1 3 540 653648608 653648072 0.000000e+00 848.0
22 TraesCS1B01G452600 chr2D 90.361 83 7 1 1981 2062 95142214 95142132 9.390000e-20 108.0
23 TraesCS1B01G452600 chrUn 86.441 59 8 0 2053 2111 264105773 264105831 5.730000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G452600 chr1B 669253378 669255860 2482 False 4586.0 4586 100.0000 1 2483 1 chr1B.!!$F1 2482
1 TraesCS1B01G452600 chr1B 669245827 669247836 2009 False 1493.5 2106 95.3495 3 1925 2 chr1B.!!$F2 1922
2 TraesCS1B01G452600 chr6D 206555756 206557797 2041 True 1516.5 2113 95.9010 3 1925 2 chr6D.!!$R1 1922
3 TraesCS1B01G452600 chr6A 435767538 435769569 2031 True 1501.0 2082 95.7390 3 1925 2 chr6A.!!$R1 1922
4 TraesCS1B01G452600 chr6A 290257729 290258291 562 False 771.0 771 91.8730 1378 1925 1 chr6A.!!$F1 547
5 TraesCS1B01G452600 chr7A 15531159 15533190 2031 False 1498.0 2076 95.7030 3 1925 2 chr7A.!!$F2 1922
6 TraesCS1B01G452600 chr4A 314681855 314683252 1397 False 2063.0 2063 93.5810 549 1925 1 chr4A.!!$F1 1376
7 TraesCS1B01G452600 chr3A 600335707 600337745 2038 False 1445.5 2010 94.6005 3 1925 2 chr3A.!!$F1 1922
8 TraesCS1B01G452600 chr3A 313527460 313529865 2405 True 1228.5 1537 95.4270 3 1925 2 chr3A.!!$R1 1922
9 TraesCS1B01G452600 chr7B 78310969 78312932 1963 False 1291.5 1768 92.5525 3 1857 2 chr7B.!!$F1 1854
10 TraesCS1B01G452600 chr7B 109933942 109935622 1680 False 1203.5 1559 94.4345 3 1596 2 chr7B.!!$F2 1593
11 TraesCS1B01G452600 chr4B 653646656 653648608 1952 True 1276.5 1705 92.7750 3 1857 2 chr4B.!!$R1 1854

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
561 662 0.377203 GAACGCCCCTTTGCTAATCG 59.623 55.0 0.0 0.0 0.0 3.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2327 2855 0.038599 AGTGTGATTCTGGCCATGCA 59.961 50.0 5.51 0.0 0.0 3.96 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
133 134 4.083590 GCTCTTAAGAGTTTGGTCAAGCAG 60.084 45.833 28.72 4.58 43.85 4.24
163 164 6.904626 AGCATTGAGGGAGTCTATTTACATT 58.095 36.000 0.00 0.00 0.00 2.71
206 207 4.362476 GCCAAAACTGCAGCCGGG 62.362 66.667 15.27 11.66 0.00 5.73
207 208 4.362476 CCAAAACTGCAGCCGGGC 62.362 66.667 15.27 12.11 0.00 6.13
221 222 1.033746 CCGGGCTGAATGTGCAAGAT 61.034 55.000 0.00 0.00 0.00 2.40
263 264 1.180029 GGCATGCAATTGAGGACTGT 58.820 50.000 21.36 0.00 0.00 3.55
342 343 1.754803 CTGCCATGCCAGAAATGACAT 59.245 47.619 0.00 0.00 34.77 3.06
450 451 4.452825 TGTTGACAAACGTTGGGAGAATA 58.547 39.130 7.76 0.00 39.30 1.75
540 541 4.079558 AGAGTGGTGATGATGCCCTAATTT 60.080 41.667 0.00 0.00 0.00 1.82
541 542 4.613437 AGTGGTGATGATGCCCTAATTTT 58.387 39.130 0.00 0.00 0.00 1.82
543 544 4.402155 GTGGTGATGATGCCCTAATTTTGA 59.598 41.667 0.00 0.00 0.00 2.69
545 546 5.105392 TGGTGATGATGCCCTAATTTTGAAC 60.105 40.000 0.00 0.00 0.00 3.18
546 547 5.036737 GTGATGATGCCCTAATTTTGAACG 58.963 41.667 0.00 0.00 0.00 3.95
547 548 3.502191 TGATGCCCTAATTTTGAACGC 57.498 42.857 0.00 0.00 0.00 4.84
561 662 0.377203 GAACGCCCCTTTGCTAATCG 59.623 55.000 0.00 0.00 0.00 3.34
955 1438 5.506708 AGAAAAGGAACTGGTTACAACACT 58.493 37.500 0.00 0.00 40.86 3.55
993 1477 6.429692 ACAATGTCTTTGTTTCATACATCCGA 59.570 34.615 0.00 0.00 46.51 4.55
1033 1517 3.006859 TCAAAAGAGGCGTGAGAAGATGA 59.993 43.478 0.00 0.00 0.00 2.92
1105 1589 2.151202 AGTGCGTTGACCCAACAATAG 58.849 47.619 10.01 0.00 43.70 1.73
1152 1636 4.272489 GTCCTGATGACATTTCATGGGAA 58.728 43.478 12.15 0.00 42.95 3.97
1182 1666 0.106519 AGGCTGTTGGTGCAAGTTCT 60.107 50.000 0.00 0.00 0.00 3.01
1248 1732 3.628769 GGGGCCCCTCAAATGTTAATGTA 60.629 47.826 35.49 0.00 0.00 2.29
1261 1745 8.788806 CAAATGTTAATGTACAGTACCAAAGGA 58.211 33.333 4.66 0.00 0.00 3.36
1286 1770 2.788191 AAAAGGGCTGCTCCGTCTCG 62.788 60.000 0.00 0.00 34.94 4.04
1324 1808 3.515502 AGATGACGAAGAGGATGACCAAA 59.484 43.478 0.00 0.00 38.94 3.28
1547 2033 7.451877 TGCCTGTTTGGAACCTAATTTATGTTA 59.548 33.333 0.00 0.00 38.35 2.41
1576 2062 8.587952 ACTTGTGAACCTAATTTATTTTGTGC 57.412 30.769 0.00 0.00 0.00 4.57
1578 2066 9.906660 CTTGTGAACCTAATTTATTTTGTGCTA 57.093 29.630 0.00 0.00 0.00 3.49
1633 2132 6.282167 TCATGTTTGTCATCTTGTTTTGCAT 58.718 32.000 0.00 0.00 34.09 3.96
1747 2264 4.393371 GCAGACTTCTATTGTGGAAGGAAC 59.607 45.833 7.76 0.61 42.96 3.62
1857 2375 2.172717 GGCTGCTCATTAGTTCCCCTAA 59.827 50.000 0.00 0.00 39.90 2.69
1873 2401 2.872858 CCCTAATTCTTGTCTAAGGCGC 59.127 50.000 0.00 0.00 34.59 6.53
1910 2438 1.227118 GAGCGCCTAGGAGTTGAGC 60.227 63.158 14.75 7.28 0.00 4.26
1929 2457 3.866582 CCCCCAAGCGCCTAGGAG 61.867 72.222 14.75 11.38 0.00 3.69
1930 2458 3.083997 CCCCAAGCGCCTAGGAGT 61.084 66.667 14.75 0.00 0.00 3.85
1931 2459 2.670148 CCCCAAGCGCCTAGGAGTT 61.670 63.158 14.75 3.94 0.00 3.01
1932 2460 1.450312 CCCAAGCGCCTAGGAGTTG 60.450 63.158 14.75 15.42 0.00 3.16
1933 2461 1.596934 CCAAGCGCCTAGGAGTTGA 59.403 57.895 14.75 0.00 0.00 3.18
1934 2462 0.460987 CCAAGCGCCTAGGAGTTGAG 60.461 60.000 14.75 4.01 0.00 3.02
1935 2463 1.086634 CAAGCGCCTAGGAGTTGAGC 61.087 60.000 14.75 7.28 0.00 4.26
1936 2464 2.202946 GCGCCTAGGAGTTGAGCC 60.203 66.667 14.75 0.00 0.00 4.70
1937 2465 2.501610 CGCCTAGGAGTTGAGCCC 59.498 66.667 14.75 0.00 0.00 5.19
1938 2466 2.911928 GCCTAGGAGTTGAGCCCC 59.088 66.667 14.75 0.00 0.00 5.80
1939 2467 2.747443 GCCTAGGAGTTGAGCCCCC 61.747 68.421 14.75 0.00 0.00 5.40
1954 2482 3.603365 CCCCCAAGCGCCTTAAAG 58.397 61.111 2.29 0.00 0.00 1.85
1955 2483 2.710902 CCCCCAAGCGCCTTAAAGC 61.711 63.158 2.29 0.00 0.00 3.51
1964 2492 2.298593 GCCTTAAAGCGCCTAGACG 58.701 57.895 2.29 0.00 0.00 4.18
1972 2500 4.590487 CGCCTAGACGCCTTGAAA 57.410 55.556 0.00 0.00 0.00 2.69
1973 2501 2.835605 CGCCTAGACGCCTTGAAAA 58.164 52.632 0.00 0.00 0.00 2.29
1974 2502 0.442699 CGCCTAGACGCCTTGAAAAC 59.557 55.000 0.00 0.00 0.00 2.43
1975 2503 1.519408 GCCTAGACGCCTTGAAAACA 58.481 50.000 0.00 0.00 0.00 2.83
1976 2504 2.084546 GCCTAGACGCCTTGAAAACAT 58.915 47.619 0.00 0.00 0.00 2.71
1977 2505 3.267483 GCCTAGACGCCTTGAAAACATA 58.733 45.455 0.00 0.00 0.00 2.29
1978 2506 3.309954 GCCTAGACGCCTTGAAAACATAG 59.690 47.826 0.00 0.00 0.00 2.23
1979 2507 4.755411 CCTAGACGCCTTGAAAACATAGA 58.245 43.478 0.00 0.00 0.00 1.98
1980 2508 4.567159 CCTAGACGCCTTGAAAACATAGAC 59.433 45.833 0.00 0.00 0.00 2.59
1981 2509 4.273148 AGACGCCTTGAAAACATAGACT 57.727 40.909 0.00 0.00 0.00 3.24
1982 2510 5.401531 AGACGCCTTGAAAACATAGACTA 57.598 39.130 0.00 0.00 0.00 2.59
1983 2511 5.978814 AGACGCCTTGAAAACATAGACTAT 58.021 37.500 0.00 0.00 0.00 2.12
1984 2512 5.812642 AGACGCCTTGAAAACATAGACTATG 59.187 40.000 19.01 19.01 41.88 2.23
1985 2513 4.876107 ACGCCTTGAAAACATAGACTATGG 59.124 41.667 23.27 7.04 40.47 2.74
1986 2514 4.260784 CGCCTTGAAAACATAGACTATGGC 60.261 45.833 23.27 14.42 40.47 4.40
1987 2515 4.260784 GCCTTGAAAACATAGACTATGGCG 60.261 45.833 23.27 2.56 40.47 5.69
1988 2516 4.260784 CCTTGAAAACATAGACTATGGCGC 60.261 45.833 23.27 0.00 40.47 6.53
1989 2517 3.202906 TGAAAACATAGACTATGGCGCC 58.797 45.455 22.73 22.73 40.47 6.53
1990 2518 1.865865 AAACATAGACTATGGCGCCG 58.134 50.000 23.90 10.49 40.47 6.46
1991 2519 0.600255 AACATAGACTATGGCGCCGC 60.600 55.000 23.90 0.00 40.47 6.53
1992 2520 1.290324 CATAGACTATGGCGCCGCT 59.710 57.895 23.90 14.61 32.55 5.52
1993 2521 0.526211 CATAGACTATGGCGCCGCTA 59.474 55.000 23.90 17.16 32.55 4.26
1994 2522 1.067846 CATAGACTATGGCGCCGCTAA 60.068 52.381 23.90 3.74 32.55 3.09
1995 2523 1.254026 TAGACTATGGCGCCGCTAAT 58.746 50.000 23.90 12.40 0.00 1.73
1996 2524 1.254026 AGACTATGGCGCCGCTAATA 58.746 50.000 23.90 12.93 0.00 0.98
1997 2525 1.202582 AGACTATGGCGCCGCTAATAG 59.797 52.381 23.90 23.46 34.15 1.73
1998 2526 0.389948 ACTATGGCGCCGCTAATAGC 60.390 55.000 24.20 1.41 38.02 2.97
1999 2527 0.389817 CTATGGCGCCGCTAATAGCA 60.390 55.000 23.90 0.00 42.58 3.49
2000 2528 0.249120 TATGGCGCCGCTAATAGCAT 59.751 50.000 23.90 8.74 42.58 3.79
2001 2529 1.300971 ATGGCGCCGCTAATAGCATG 61.301 55.000 23.90 3.85 42.58 4.06
2002 2530 2.174349 GCGCCGCTAATAGCATGC 59.826 61.111 10.51 10.51 42.58 4.06
2003 2531 2.320587 GCGCCGCTAATAGCATGCT 61.321 57.895 25.99 25.99 42.58 3.79
2004 2532 1.014044 GCGCCGCTAATAGCATGCTA 61.014 55.000 28.72 28.72 42.58 3.49
2005 2533 1.645034 CGCCGCTAATAGCATGCTAT 58.355 50.000 30.43 30.43 42.58 2.97
2006 2534 2.809446 CGCCGCTAATAGCATGCTATA 58.191 47.619 34.51 22.41 42.58 1.31
2007 2535 2.791560 CGCCGCTAATAGCATGCTATAG 59.208 50.000 34.51 28.71 42.58 1.31
2008 2536 3.735208 CGCCGCTAATAGCATGCTATAGT 60.735 47.826 34.51 24.27 42.58 2.12
2009 2537 3.553511 GCCGCTAATAGCATGCTATAGTG 59.446 47.826 34.51 30.74 42.58 2.74
2010 2538 4.748892 CCGCTAATAGCATGCTATAGTGT 58.251 43.478 34.51 23.31 42.58 3.55
2011 2539 4.564372 CCGCTAATAGCATGCTATAGTGTG 59.436 45.833 34.51 28.85 42.58 3.82
2012 2540 5.164233 CGCTAATAGCATGCTATAGTGTGT 58.836 41.667 34.51 22.35 42.58 3.72
2013 2541 6.322491 CGCTAATAGCATGCTATAGTGTGTA 58.678 40.000 34.51 22.28 42.58 2.90
2014 2542 6.806739 CGCTAATAGCATGCTATAGTGTGTAA 59.193 38.462 34.51 11.09 42.58 2.41
2015 2543 7.328493 CGCTAATAGCATGCTATAGTGTGTAAA 59.672 37.037 34.51 10.56 42.58 2.01
2016 2544 8.651588 GCTAATAGCATGCTATAGTGTGTAAAG 58.348 37.037 34.51 21.00 41.89 1.85
2017 2545 9.914131 CTAATAGCATGCTATAGTGTGTAAAGA 57.086 33.333 34.51 9.90 38.20 2.52
2018 2546 8.824159 AATAGCATGCTATAGTGTGTAAAGAG 57.176 34.615 34.51 0.00 38.20 2.85
2019 2547 6.227298 AGCATGCTATAGTGTGTAAAGAGT 57.773 37.500 21.21 0.00 0.00 3.24
2020 2548 6.644347 AGCATGCTATAGTGTGTAAAGAGTT 58.356 36.000 21.21 0.00 0.00 3.01
2021 2549 6.536582 AGCATGCTATAGTGTGTAAAGAGTTG 59.463 38.462 21.21 0.00 0.00 3.16
2022 2550 6.313905 GCATGCTATAGTGTGTAAAGAGTTGT 59.686 38.462 11.37 0.00 0.00 3.32
2023 2551 7.464710 GCATGCTATAGTGTGTAAAGAGTTGTC 60.465 40.741 11.37 0.00 0.00 3.18
2024 2552 7.228314 TGCTATAGTGTGTAAAGAGTTGTCT 57.772 36.000 0.84 0.00 32.81 3.41
2025 2553 7.313646 TGCTATAGTGTGTAAAGAGTTGTCTC 58.686 38.462 0.84 0.00 40.70 3.36
2026 2554 6.469595 GCTATAGTGTGTAAAGAGTTGTCTCG 59.530 42.308 0.84 0.00 44.65 4.04
2027 2555 3.381949 AGTGTGTAAAGAGTTGTCTCGC 58.618 45.455 0.00 0.00 44.65 5.03
2028 2556 3.068307 AGTGTGTAAAGAGTTGTCTCGCT 59.932 43.478 0.00 0.00 44.65 4.93
2029 2557 4.277672 AGTGTGTAAAGAGTTGTCTCGCTA 59.722 41.667 0.00 0.00 44.65 4.26
2030 2558 4.980434 GTGTGTAAAGAGTTGTCTCGCTAA 59.020 41.667 0.00 0.00 44.65 3.09
2031 2559 5.461078 GTGTGTAAAGAGTTGTCTCGCTAAA 59.539 40.000 0.00 0.00 44.65 1.85
2032 2560 6.145696 GTGTGTAAAGAGTTGTCTCGCTAAAT 59.854 38.462 0.00 0.00 44.65 1.40
2033 2561 6.704493 TGTGTAAAGAGTTGTCTCGCTAAATT 59.296 34.615 0.00 0.00 44.65 1.82
2034 2562 7.225931 TGTGTAAAGAGTTGTCTCGCTAAATTT 59.774 33.333 0.00 0.00 44.65 1.82
2035 2563 8.706035 GTGTAAAGAGTTGTCTCGCTAAATTTA 58.294 33.333 0.00 0.00 44.65 1.40
2036 2564 9.431887 TGTAAAGAGTTGTCTCGCTAAATTTAT 57.568 29.630 0.00 0.00 44.65 1.40
2039 2567 7.907214 AGAGTTGTCTCGCTAAATTTATTGT 57.093 32.000 0.00 0.00 44.65 2.71
2040 2568 7.743104 AGAGTTGTCTCGCTAAATTTATTGTG 58.257 34.615 0.00 0.00 44.65 3.33
2041 2569 7.387948 AGAGTTGTCTCGCTAAATTTATTGTGT 59.612 33.333 0.00 0.00 44.65 3.72
2042 2570 8.542497 AGTTGTCTCGCTAAATTTATTGTGTA 57.458 30.769 0.00 0.00 0.00 2.90
2043 2571 8.440833 AGTTGTCTCGCTAAATTTATTGTGTAC 58.559 33.333 0.00 0.00 0.00 2.90
2044 2572 7.892778 TGTCTCGCTAAATTTATTGTGTACA 57.107 32.000 0.00 0.00 0.00 2.90
2045 2573 8.312896 TGTCTCGCTAAATTTATTGTGTACAA 57.687 30.769 0.00 0.00 40.51 2.41
2047 2575 9.210426 GTCTCGCTAAATTTATTGTGTACAATG 57.790 33.333 17.94 3.34 45.34 2.82
2048 2576 8.941977 TCTCGCTAAATTTATTGTGTACAATGT 58.058 29.630 17.94 0.00 45.34 2.71
2049 2577 9.210426 CTCGCTAAATTTATTGTGTACAATGTC 57.790 33.333 17.94 0.00 45.34 3.06
2050 2578 8.941977 TCGCTAAATTTATTGTGTACAATGTCT 58.058 29.630 17.94 2.33 45.34 3.41
2051 2579 9.554724 CGCTAAATTTATTGTGTACAATGTCTT 57.445 29.630 17.94 9.63 45.34 3.01
2055 2583 8.746922 AATTTATTGTGTACAATGTCTTGCTG 57.253 30.769 17.94 0.00 45.34 4.41
2056 2584 7.503521 TTTATTGTGTACAATGTCTTGCTGA 57.496 32.000 17.94 0.00 45.34 4.26
2057 2585 7.686438 TTATTGTGTACAATGTCTTGCTGAT 57.314 32.000 17.94 0.00 45.34 2.90
2058 2586 8.785329 TTATTGTGTACAATGTCTTGCTGATA 57.215 30.769 17.94 0.00 45.34 2.15
2059 2587 6.726258 TTGTGTACAATGTCTTGCTGATAG 57.274 37.500 0.00 0.00 35.69 2.08
2060 2588 4.631377 TGTGTACAATGTCTTGCTGATAGC 59.369 41.667 0.00 0.00 42.82 2.97
2061 2589 8.491374 ATTGTGTACAATGTCTTGCTGATAGCA 61.491 37.037 9.29 0.00 46.06 3.49
2073 2601 3.406764 GCTGATAGCATACTTTCAGGGG 58.593 50.000 13.38 0.00 46.33 4.79
2074 2602 3.406764 CTGATAGCATACTTTCAGGGGC 58.593 50.000 5.69 0.00 44.01 5.80
2075 2603 3.048600 TGATAGCATACTTTCAGGGGCT 58.951 45.455 0.00 0.00 31.28 5.19
2076 2604 3.181451 TGATAGCATACTTTCAGGGGCTG 60.181 47.826 0.00 0.00 31.28 4.85
2077 2605 0.394899 AGCATACTTTCAGGGGCTGC 60.395 55.000 0.00 0.00 0.00 5.25
2078 2606 1.718757 GCATACTTTCAGGGGCTGCG 61.719 60.000 0.00 0.00 0.00 5.18
2079 2607 1.452108 ATACTTTCAGGGGCTGCGC 60.452 57.895 8.35 8.35 0.00 6.09
2080 2608 1.915078 ATACTTTCAGGGGCTGCGCT 61.915 55.000 16.51 0.00 0.00 5.92
2081 2609 1.261938 TACTTTCAGGGGCTGCGCTA 61.262 55.000 16.51 0.03 0.00 4.26
2082 2610 1.153086 CTTTCAGGGGCTGCGCTAT 60.153 57.895 16.51 3.01 0.00 2.97
2083 2611 0.749454 CTTTCAGGGGCTGCGCTATT 60.749 55.000 16.51 0.21 0.00 1.73
2084 2612 0.323360 TTTCAGGGGCTGCGCTATTT 60.323 50.000 16.51 0.00 0.00 1.40
2085 2613 0.323360 TTCAGGGGCTGCGCTATTTT 60.323 50.000 16.51 0.00 0.00 1.82
2086 2614 1.031571 TCAGGGGCTGCGCTATTTTG 61.032 55.000 16.51 7.73 0.00 2.44
2087 2615 1.000896 AGGGGCTGCGCTATTTTGT 60.001 52.632 16.51 0.00 0.00 2.83
2088 2616 0.254747 AGGGGCTGCGCTATTTTGTA 59.745 50.000 16.51 0.00 0.00 2.41
2089 2617 1.133792 AGGGGCTGCGCTATTTTGTAT 60.134 47.619 16.51 0.00 0.00 2.29
2090 2618 2.105821 AGGGGCTGCGCTATTTTGTATA 59.894 45.455 16.51 0.00 0.00 1.47
2091 2619 2.484264 GGGGCTGCGCTATTTTGTATAG 59.516 50.000 16.51 0.00 0.00 1.31
2092 2620 2.095718 GGGCTGCGCTATTTTGTATAGC 60.096 50.000 9.73 4.53 42.53 2.97
2093 2621 2.548057 GGCTGCGCTATTTTGTATAGCA 59.452 45.455 9.73 0.04 45.32 3.49
2094 2622 3.545633 GCTGCGCTATTTTGTATAGCAC 58.454 45.455 9.73 7.48 45.32 4.40
2095 2623 3.787826 CTGCGCTATTTTGTATAGCACG 58.212 45.455 9.73 3.42 45.32 5.34
2096 2624 2.033236 TGCGCTATTTTGTATAGCACGC 60.033 45.455 9.73 11.60 45.32 5.34
2097 2625 2.221055 GCGCTATTTTGTATAGCACGCT 59.779 45.455 14.90 0.00 45.32 5.07
2098 2626 3.427528 GCGCTATTTTGTATAGCACGCTA 59.572 43.478 14.90 0.39 45.32 4.26
2099 2627 4.091509 GCGCTATTTTGTATAGCACGCTAT 59.908 41.667 15.45 15.45 45.32 2.97
2100 2628 5.389516 GCGCTATTTTGTATAGCACGCTATT 60.390 40.000 16.26 0.95 45.32 1.73
2101 2629 6.590357 CGCTATTTTGTATAGCACGCTATTT 58.410 36.000 16.26 0.00 45.32 1.40
2102 2630 7.069569 CGCTATTTTGTATAGCACGCTATTTT 58.930 34.615 16.26 0.00 45.32 1.82
2103 2631 7.586300 CGCTATTTTGTATAGCACGCTATTTTT 59.414 33.333 16.26 0.00 45.32 1.94
2144 2672 9.607988 ATTGATAGTATTTGGTTTATGTCACGA 57.392 29.630 0.00 0.00 0.00 4.35
2145 2673 9.438228 TTGATAGTATTTGGTTTATGTCACGAA 57.562 29.630 0.00 0.00 0.00 3.85
2146 2674 9.093970 TGATAGTATTTGGTTTATGTCACGAAG 57.906 33.333 0.00 0.00 0.00 3.79
2147 2675 6.178239 AGTATTTGGTTTATGTCACGAAGC 57.822 37.500 0.00 0.00 0.00 3.86
2148 2676 3.907894 TTTGGTTTATGTCACGAAGCC 57.092 42.857 0.00 0.00 0.00 4.35
2149 2677 1.816074 TGGTTTATGTCACGAAGCCC 58.184 50.000 0.00 0.00 0.00 5.19
2150 2678 1.072489 TGGTTTATGTCACGAAGCCCA 59.928 47.619 0.00 0.00 0.00 5.36
2151 2679 2.290641 TGGTTTATGTCACGAAGCCCAT 60.291 45.455 0.00 0.00 0.00 4.00
2152 2680 2.752903 GGTTTATGTCACGAAGCCCATT 59.247 45.455 0.00 0.00 0.00 3.16
2153 2681 3.192633 GGTTTATGTCACGAAGCCCATTT 59.807 43.478 0.00 0.00 0.00 2.32
2154 2682 4.165779 GTTTATGTCACGAAGCCCATTTG 58.834 43.478 0.00 0.00 0.00 2.32
2155 2683 1.909700 ATGTCACGAAGCCCATTTGT 58.090 45.000 0.00 0.00 35.78 2.83
2156 2684 1.686355 TGTCACGAAGCCCATTTGTT 58.314 45.000 0.00 0.00 32.84 2.83
2157 2685 2.852449 TGTCACGAAGCCCATTTGTTA 58.148 42.857 0.00 0.00 32.84 2.41
2158 2686 3.215151 TGTCACGAAGCCCATTTGTTAA 58.785 40.909 0.00 0.00 32.84 2.01
2159 2687 3.632604 TGTCACGAAGCCCATTTGTTAAA 59.367 39.130 0.00 0.00 32.84 1.52
2160 2688 3.978855 GTCACGAAGCCCATTTGTTAAAC 59.021 43.478 0.00 0.00 32.84 2.01
2161 2689 3.632604 TCACGAAGCCCATTTGTTAAACA 59.367 39.130 0.00 0.00 32.84 2.83
2162 2690 4.098044 TCACGAAGCCCATTTGTTAAACAA 59.902 37.500 0.00 0.00 36.11 2.83
2163 2691 4.208253 CACGAAGCCCATTTGTTAAACAAC 59.792 41.667 0.00 0.00 37.90 3.32
2164 2692 4.142138 ACGAAGCCCATTTGTTAAACAACA 60.142 37.500 0.00 0.00 37.90 3.33
2165 2693 4.208253 CGAAGCCCATTTGTTAAACAACAC 59.792 41.667 0.00 0.00 37.90 3.32
2166 2694 5.351948 AAGCCCATTTGTTAAACAACACT 57.648 34.783 0.00 0.00 37.90 3.55
2167 2695 4.944048 AGCCCATTTGTTAAACAACACTC 58.056 39.130 0.00 0.00 37.90 3.51
2168 2696 4.404073 AGCCCATTTGTTAAACAACACTCA 59.596 37.500 0.00 0.00 37.90 3.41
2169 2697 4.744631 GCCCATTTGTTAAACAACACTCAG 59.255 41.667 0.00 0.00 37.90 3.35
2170 2698 5.681179 GCCCATTTGTTAAACAACACTCAGT 60.681 40.000 0.00 0.00 37.90 3.41
2171 2699 6.460399 GCCCATTTGTTAAACAACACTCAGTA 60.460 38.462 0.00 0.00 37.90 2.74
2172 2700 7.657336 CCCATTTGTTAAACAACACTCAGTAT 58.343 34.615 0.00 0.00 37.90 2.12
2173 2701 7.807907 CCCATTTGTTAAACAACACTCAGTATC 59.192 37.037 0.00 0.00 37.90 2.24
2174 2702 8.349245 CCATTTGTTAAACAACACTCAGTATCA 58.651 33.333 0.00 0.00 37.90 2.15
2175 2703 9.385902 CATTTGTTAAACAACACTCAGTATCAG 57.614 33.333 0.00 0.00 37.90 2.90
2176 2704 6.539649 TGTTAAACAACACTCAGTATCAGC 57.460 37.500 0.00 0.00 0.00 4.26
2177 2705 6.288294 TGTTAAACAACACTCAGTATCAGCT 58.712 36.000 0.00 0.00 0.00 4.24
2178 2706 7.438564 TGTTAAACAACACTCAGTATCAGCTA 58.561 34.615 0.00 0.00 0.00 3.32
2179 2707 7.384115 TGTTAAACAACACTCAGTATCAGCTAC 59.616 37.037 0.00 0.00 0.00 3.58
2180 2708 4.098055 ACAACACTCAGTATCAGCTACG 57.902 45.455 0.00 0.00 35.35 3.51
2181 2709 3.119459 ACAACACTCAGTATCAGCTACGG 60.119 47.826 0.00 0.00 35.35 4.02
2182 2710 3.000684 ACACTCAGTATCAGCTACGGA 57.999 47.619 0.00 0.00 35.35 4.69
2183 2711 3.353557 ACACTCAGTATCAGCTACGGAA 58.646 45.455 0.00 0.00 34.69 4.30
2184 2712 3.762288 ACACTCAGTATCAGCTACGGAAA 59.238 43.478 0.00 0.00 34.69 3.13
2185 2713 4.106197 CACTCAGTATCAGCTACGGAAAC 58.894 47.826 0.00 0.00 34.69 2.78
2186 2714 4.017808 ACTCAGTATCAGCTACGGAAACT 58.982 43.478 0.00 0.00 34.69 2.66
2187 2715 5.066117 CACTCAGTATCAGCTACGGAAACTA 59.934 44.000 0.00 0.00 34.69 2.24
2188 2716 5.066246 ACTCAGTATCAGCTACGGAAACTAC 59.934 44.000 0.00 0.00 34.69 2.73
2189 2717 4.337555 TCAGTATCAGCTACGGAAACTACC 59.662 45.833 0.00 0.00 32.51 3.18
2190 2718 4.097437 CAGTATCAGCTACGGAAACTACCA 59.903 45.833 0.00 0.00 35.35 3.25
2191 2719 4.894114 AGTATCAGCTACGGAAACTACCAT 59.106 41.667 0.00 0.00 35.35 3.55
2192 2720 4.755266 ATCAGCTACGGAAACTACCATT 57.245 40.909 0.00 0.00 0.00 3.16
2193 2721 5.864418 ATCAGCTACGGAAACTACCATTA 57.136 39.130 0.00 0.00 0.00 1.90
2194 2722 5.258456 TCAGCTACGGAAACTACCATTAG 57.742 43.478 0.00 0.00 0.00 1.73
2195 2723 4.708421 TCAGCTACGGAAACTACCATTAGT 59.292 41.667 0.00 0.00 40.55 2.24
2197 2725 5.291128 CAGCTACGGAAACTACCATTAGTTG 59.709 44.000 0.00 0.00 46.10 3.16
2198 2726 5.046807 AGCTACGGAAACTACCATTAGTTGT 60.047 40.000 0.00 0.00 46.10 3.32
2199 2727 6.153340 AGCTACGGAAACTACCATTAGTTGTA 59.847 38.462 0.00 0.00 46.10 2.41
2200 2728 6.254373 GCTACGGAAACTACCATTAGTTGTAC 59.746 42.308 0.00 0.00 46.10 2.90
2201 2729 6.350629 ACGGAAACTACCATTAGTTGTACT 57.649 37.500 0.00 0.00 46.10 2.73
2202 2730 7.466746 ACGGAAACTACCATTAGTTGTACTA 57.533 36.000 0.00 0.00 46.10 1.82
2203 2731 7.895759 ACGGAAACTACCATTAGTTGTACTAA 58.104 34.615 2.11 2.11 46.10 2.24
2244 2772 9.783256 AGACACAAATAAGTCTTTTGTTTGTAC 57.217 29.630 16.45 14.28 42.96 2.90
2245 2773 9.562583 GACACAAATAAGTCTTTTGTTTGTACA 57.437 29.630 16.45 0.00 42.96 2.90
2246 2774 9.915629 ACACAAATAAGTCTTTTGTTTGTACAA 57.084 25.926 3.59 3.59 42.96 2.41
2259 2787 6.952935 TGTTTGTACAAAAACAATGGTGTC 57.047 33.333 22.14 6.44 44.79 3.67
2260 2788 6.692486 TGTTTGTACAAAAACAATGGTGTCT 58.308 32.000 22.14 0.00 44.79 3.41
2261 2789 7.827701 TGTTTGTACAAAAACAATGGTGTCTA 58.172 30.769 22.14 0.00 44.79 2.59
2262 2790 7.971168 TGTTTGTACAAAAACAATGGTGTCTAG 59.029 33.333 22.14 0.00 44.79 2.43
2263 2791 7.633193 TTGTACAAAAACAATGGTGTCTAGT 57.367 32.000 5.64 0.00 36.80 2.57
2264 2792 7.633193 TGTACAAAAACAATGGTGTCTAGTT 57.367 32.000 0.00 0.00 36.80 2.24
2265 2793 8.734218 TGTACAAAAACAATGGTGTCTAGTTA 57.266 30.769 0.00 0.00 36.80 2.24
2266 2794 9.344772 TGTACAAAAACAATGGTGTCTAGTTAT 57.655 29.630 0.00 0.00 36.80 1.89
2267 2795 9.607285 GTACAAAAACAATGGTGTCTAGTTATG 57.393 33.333 0.00 0.00 36.80 1.90
2268 2796 8.232913 ACAAAAACAATGGTGTCTAGTTATGT 57.767 30.769 0.00 0.00 36.80 2.29
2269 2797 8.691797 ACAAAAACAATGGTGTCTAGTTATGTT 58.308 29.630 0.00 0.00 36.80 2.71
2270 2798 8.967218 CAAAAACAATGGTGTCTAGTTATGTTG 58.033 33.333 0.00 0.00 36.80 3.33
2271 2799 8.458573 AAAACAATGGTGTCTAGTTATGTTGA 57.541 30.769 0.00 0.00 36.80 3.18
2272 2800 7.672983 AACAATGGTGTCTAGTTATGTTGAG 57.327 36.000 0.00 0.00 36.80 3.02
2273 2801 7.004555 ACAATGGTGTCTAGTTATGTTGAGA 57.995 36.000 0.00 0.00 29.49 3.27
2274 2802 7.099764 ACAATGGTGTCTAGTTATGTTGAGAG 58.900 38.462 0.00 0.00 29.49 3.20
2275 2803 5.073311 TGGTGTCTAGTTATGTTGAGAGC 57.927 43.478 0.00 0.00 0.00 4.09
2276 2804 4.772624 TGGTGTCTAGTTATGTTGAGAGCT 59.227 41.667 0.00 0.00 0.00 4.09
2277 2805 5.949952 TGGTGTCTAGTTATGTTGAGAGCTA 59.050 40.000 0.00 0.00 0.00 3.32
2278 2806 6.607600 TGGTGTCTAGTTATGTTGAGAGCTAT 59.392 38.462 0.00 0.00 0.00 2.97
2279 2807 7.778382 TGGTGTCTAGTTATGTTGAGAGCTATA 59.222 37.037 0.00 0.00 0.00 1.31
2280 2808 8.293867 GGTGTCTAGTTATGTTGAGAGCTATAG 58.706 40.741 0.00 0.00 0.00 1.31
2281 2809 8.293867 GTGTCTAGTTATGTTGAGAGCTATAGG 58.706 40.741 1.04 0.00 0.00 2.57
2282 2810 7.040340 TGTCTAGTTATGTTGAGAGCTATAGGC 60.040 40.741 1.04 0.00 42.19 3.93
2283 2811 7.004691 TCTAGTTATGTTGAGAGCTATAGGCA 58.995 38.462 1.04 0.00 44.79 4.75
2284 2812 6.678568 AGTTATGTTGAGAGCTATAGGCAT 57.321 37.500 1.04 0.00 44.79 4.40
2285 2813 7.782897 AGTTATGTTGAGAGCTATAGGCATA 57.217 36.000 1.04 0.00 44.79 3.14
2286 2814 8.195165 AGTTATGTTGAGAGCTATAGGCATAA 57.805 34.615 1.04 0.00 44.79 1.90
2287 2815 8.820831 AGTTATGTTGAGAGCTATAGGCATAAT 58.179 33.333 1.04 3.13 44.79 1.28
2288 2816 8.877779 GTTATGTTGAGAGCTATAGGCATAATG 58.122 37.037 1.04 0.00 44.79 1.90
2289 2817 6.670695 TGTTGAGAGCTATAGGCATAATGA 57.329 37.500 1.04 0.00 44.79 2.57
2290 2818 7.250032 TGTTGAGAGCTATAGGCATAATGAT 57.750 36.000 1.04 0.00 44.79 2.45
2291 2819 7.683578 TGTTGAGAGCTATAGGCATAATGATT 58.316 34.615 1.04 0.00 44.79 2.57
2292 2820 7.605309 TGTTGAGAGCTATAGGCATAATGATTG 59.395 37.037 1.04 0.00 44.79 2.67
2293 2821 7.250032 TGAGAGCTATAGGCATAATGATTGT 57.750 36.000 1.04 0.00 44.79 2.71
2294 2822 7.326454 TGAGAGCTATAGGCATAATGATTGTC 58.674 38.462 1.04 0.00 44.79 3.18
2295 2823 7.038799 TGAGAGCTATAGGCATAATGATTGTCA 60.039 37.037 1.04 0.00 44.79 3.58
2296 2824 7.859540 AGAGCTATAGGCATAATGATTGTCAT 58.140 34.615 1.04 0.00 44.79 3.06
2297 2825 8.985922 AGAGCTATAGGCATAATGATTGTCATA 58.014 33.333 1.04 0.00 44.79 2.15
2298 2826 9.775854 GAGCTATAGGCATAATGATTGTCATAT 57.224 33.333 1.04 0.00 44.79 1.78
2299 2827 9.775854 AGCTATAGGCATAATGATTGTCATATC 57.224 33.333 1.04 0.00 44.79 1.63
2300 2828 9.551734 GCTATAGGCATAATGATTGTCATATCA 57.448 33.333 1.04 0.00 37.19 2.15
2305 2833 9.404848 AGGCATAATGATTGTCATATCAATAGG 57.595 33.333 0.00 0.00 35.76 2.57
2306 2834 9.399797 GGCATAATGATTGTCATATCAATAGGA 57.600 33.333 0.00 0.00 35.76 2.94
2329 2857 8.774586 AGGATATACATAAGACGTTGAAAATGC 58.225 33.333 0.00 0.00 35.88 3.56
2330 2858 8.556194 GGATATACATAAGACGTTGAAAATGCA 58.444 33.333 0.00 0.00 35.88 3.96
2332 2860 9.882996 ATATACATAAGACGTTGAAAATGCATG 57.117 29.630 0.00 0.00 35.88 4.06
2333 2861 5.401550 ACATAAGACGTTGAAAATGCATGG 58.598 37.500 0.00 0.00 35.88 3.66
2334 2862 2.352503 AGACGTTGAAAATGCATGGC 57.647 45.000 0.00 0.00 35.88 4.40
2335 2863 1.067635 AGACGTTGAAAATGCATGGCC 60.068 47.619 0.00 0.00 35.88 5.36
2336 2864 0.678395 ACGTTGAAAATGCATGGCCA 59.322 45.000 8.56 8.56 35.88 5.36
2337 2865 1.337074 ACGTTGAAAATGCATGGCCAG 60.337 47.619 13.05 4.54 35.88 4.85
2338 2866 1.067706 CGTTGAAAATGCATGGCCAGA 60.068 47.619 13.05 0.00 0.00 3.86
2339 2867 2.609984 CGTTGAAAATGCATGGCCAGAA 60.610 45.455 13.05 0.00 0.00 3.02
2340 2868 3.602483 GTTGAAAATGCATGGCCAGAAT 58.398 40.909 13.05 1.04 0.00 2.40
2341 2869 3.530265 TGAAAATGCATGGCCAGAATC 57.470 42.857 13.05 3.09 0.00 2.52
2342 2870 2.832733 TGAAAATGCATGGCCAGAATCA 59.167 40.909 13.05 6.53 0.00 2.57
2343 2871 2.973694 AAATGCATGGCCAGAATCAC 57.026 45.000 13.05 0.00 0.00 3.06
2344 2872 1.855295 AATGCATGGCCAGAATCACA 58.145 45.000 13.05 2.93 0.00 3.58
2345 2873 1.108776 ATGCATGGCCAGAATCACAC 58.891 50.000 13.05 0.00 0.00 3.82
2346 2874 0.038599 TGCATGGCCAGAATCACACT 59.961 50.000 13.05 0.00 0.00 3.55
2347 2875 1.180029 GCATGGCCAGAATCACACTT 58.820 50.000 13.05 0.00 0.00 3.16
2348 2876 1.133790 GCATGGCCAGAATCACACTTC 59.866 52.381 13.05 0.00 0.00 3.01
2349 2877 2.719739 CATGGCCAGAATCACACTTCT 58.280 47.619 13.05 0.00 35.88 2.85
2350 2878 2.479566 TGGCCAGAATCACACTTCTC 57.520 50.000 0.00 0.00 33.18 2.87
2351 2879 1.699083 TGGCCAGAATCACACTTCTCA 59.301 47.619 0.00 0.00 33.18 3.27
2352 2880 2.079925 GGCCAGAATCACACTTCTCAC 58.920 52.381 0.00 0.00 33.18 3.51
2353 2881 2.079925 GCCAGAATCACACTTCTCACC 58.920 52.381 0.00 0.00 33.18 4.02
2354 2882 2.289945 GCCAGAATCACACTTCTCACCT 60.290 50.000 0.00 0.00 33.18 4.00
2355 2883 3.808618 GCCAGAATCACACTTCTCACCTT 60.809 47.826 0.00 0.00 33.18 3.50
2356 2884 4.392940 CCAGAATCACACTTCTCACCTTT 58.607 43.478 0.00 0.00 33.18 3.11
2357 2885 4.823989 CCAGAATCACACTTCTCACCTTTT 59.176 41.667 0.00 0.00 33.18 2.27
2358 2886 5.278169 CCAGAATCACACTTCTCACCTTTTG 60.278 44.000 0.00 0.00 33.18 2.44
2359 2887 4.276926 AGAATCACACTTCTCACCTTTTGC 59.723 41.667 0.00 0.00 29.38 3.68
2360 2888 2.297701 TCACACTTCTCACCTTTTGCC 58.702 47.619 0.00 0.00 0.00 4.52
2361 2889 2.023673 CACACTTCTCACCTTTTGCCA 58.976 47.619 0.00 0.00 0.00 4.92
2362 2890 2.624838 CACACTTCTCACCTTTTGCCAT 59.375 45.455 0.00 0.00 0.00 4.40
2363 2891 3.820467 CACACTTCTCACCTTTTGCCATA 59.180 43.478 0.00 0.00 0.00 2.74
2364 2892 4.460382 CACACTTCTCACCTTTTGCCATAT 59.540 41.667 0.00 0.00 0.00 1.78
2365 2893 5.047802 CACACTTCTCACCTTTTGCCATATT 60.048 40.000 0.00 0.00 0.00 1.28
2366 2894 6.150976 CACACTTCTCACCTTTTGCCATATTA 59.849 38.462 0.00 0.00 0.00 0.98
2367 2895 6.375455 ACACTTCTCACCTTTTGCCATATTAG 59.625 38.462 0.00 0.00 0.00 1.73
2368 2896 5.888161 ACTTCTCACCTTTTGCCATATTAGG 59.112 40.000 0.00 0.00 0.00 2.69
2369 2897 4.792068 TCTCACCTTTTGCCATATTAGGG 58.208 43.478 0.00 0.00 0.00 3.53
2370 2898 3.891366 CTCACCTTTTGCCATATTAGGGG 59.109 47.826 0.00 0.00 0.00 4.79
2371 2899 3.529734 TCACCTTTTGCCATATTAGGGGA 59.470 43.478 0.00 0.00 36.10 4.81
2372 2900 3.636764 CACCTTTTGCCATATTAGGGGAC 59.363 47.826 0.00 0.00 30.76 4.46
2374 2902 4.016572 ACCTTTTGCCATATTAGGGGACTT 60.017 41.667 0.00 0.00 43.67 3.01
2375 2903 4.342092 CCTTTTGCCATATTAGGGGACTTG 59.658 45.833 0.00 0.00 43.67 3.16
2376 2904 4.601406 TTTGCCATATTAGGGGACTTGT 57.399 40.909 0.00 0.00 43.67 3.16
2377 2905 4.601406 TTGCCATATTAGGGGACTTGTT 57.399 40.909 0.00 0.00 43.67 2.83
2378 2906 4.601406 TGCCATATTAGGGGACTTGTTT 57.399 40.909 0.00 0.00 43.67 2.83
2379 2907 4.277476 TGCCATATTAGGGGACTTGTTTG 58.723 43.478 0.00 0.00 43.67 2.93
2380 2908 4.264172 TGCCATATTAGGGGACTTGTTTGT 60.264 41.667 0.00 0.00 43.67 2.83
2381 2909 4.097892 GCCATATTAGGGGACTTGTTTGTG 59.902 45.833 0.00 0.00 43.67 3.33
2382 2910 5.261216 CCATATTAGGGGACTTGTTTGTGT 58.739 41.667 0.00 0.00 43.67 3.72
2383 2911 6.419791 CCATATTAGGGGACTTGTTTGTGTA 58.580 40.000 0.00 0.00 43.67 2.90
2384 2912 6.887545 CCATATTAGGGGACTTGTTTGTGTAA 59.112 38.462 0.00 0.00 43.67 2.41
2385 2913 7.148137 CCATATTAGGGGACTTGTTTGTGTAAC 60.148 40.741 0.00 0.00 43.67 2.50
2386 2914 2.940158 AGGGGACTTGTTTGTGTAACC 58.060 47.619 0.00 0.00 37.44 2.85
2387 2915 2.242708 AGGGGACTTGTTTGTGTAACCA 59.757 45.455 0.00 0.00 37.44 3.67
2388 2916 3.025262 GGGGACTTGTTTGTGTAACCAA 58.975 45.455 0.00 0.00 35.81 3.67
2389 2917 3.067601 GGGGACTTGTTTGTGTAACCAAG 59.932 47.826 0.00 0.00 35.81 3.61
2390 2918 3.949113 GGGACTTGTTTGTGTAACCAAGA 59.051 43.478 5.34 0.00 35.81 3.02
2391 2919 4.036380 GGGACTTGTTTGTGTAACCAAGAG 59.964 45.833 5.34 0.00 35.81 2.85
2392 2920 4.497507 GGACTTGTTTGTGTAACCAAGAGC 60.498 45.833 5.34 0.00 35.81 4.09
2393 2921 4.270008 ACTTGTTTGTGTAACCAAGAGCT 58.730 39.130 5.34 0.00 35.81 4.09
2394 2922 4.335594 ACTTGTTTGTGTAACCAAGAGCTC 59.664 41.667 5.27 5.27 35.81 4.09
2395 2923 3.879998 TGTTTGTGTAACCAAGAGCTCA 58.120 40.909 17.77 0.00 35.81 4.26
2396 2924 4.460263 TGTTTGTGTAACCAAGAGCTCAT 58.540 39.130 17.77 0.00 35.81 2.90
2397 2925 4.887071 TGTTTGTGTAACCAAGAGCTCATT 59.113 37.500 17.77 7.11 35.81 2.57
2398 2926 5.359576 TGTTTGTGTAACCAAGAGCTCATTT 59.640 36.000 17.77 5.48 35.81 2.32
2399 2927 5.437289 TTGTGTAACCAAGAGCTCATTTG 57.563 39.130 17.77 12.40 34.36 2.32
2400 2928 4.460263 TGTGTAACCAAGAGCTCATTTGT 58.540 39.130 17.77 6.65 34.36 2.83
2401 2929 4.275689 TGTGTAACCAAGAGCTCATTTGTG 59.724 41.667 17.77 9.08 34.36 3.33
2402 2930 3.820467 TGTAACCAAGAGCTCATTTGTGG 59.180 43.478 17.77 16.03 0.00 4.17
2403 2931 1.915141 ACCAAGAGCTCATTTGTGGG 58.085 50.000 17.77 3.96 0.00 4.61
2404 2932 1.145738 ACCAAGAGCTCATTTGTGGGT 59.854 47.619 17.77 4.69 0.00 4.51
2405 2933 1.815003 CCAAGAGCTCATTTGTGGGTC 59.185 52.381 17.77 0.00 0.00 4.46
2406 2934 2.553904 CCAAGAGCTCATTTGTGGGTCT 60.554 50.000 17.77 0.00 39.11 3.85
2407 2935 3.307691 CCAAGAGCTCATTTGTGGGTCTA 60.308 47.826 17.77 0.00 36.91 2.59
2408 2936 3.902881 AGAGCTCATTTGTGGGTCTAG 57.097 47.619 17.77 0.00 36.29 2.43
2409 2937 3.177228 AGAGCTCATTTGTGGGTCTAGT 58.823 45.455 17.77 0.00 36.29 2.57
2410 2938 4.353777 AGAGCTCATTTGTGGGTCTAGTA 58.646 43.478 17.77 0.00 36.29 1.82
2411 2939 4.777896 AGAGCTCATTTGTGGGTCTAGTAA 59.222 41.667 17.77 0.00 36.29 2.24
2412 2940 5.091261 AGCTCATTTGTGGGTCTAGTAAG 57.909 43.478 0.00 0.00 0.00 2.34
2413 2941 4.777896 AGCTCATTTGTGGGTCTAGTAAGA 59.222 41.667 0.00 0.00 0.00 2.10
2414 2942 5.426833 AGCTCATTTGTGGGTCTAGTAAGAT 59.573 40.000 0.00 0.00 33.30 2.40
2415 2943 6.069963 AGCTCATTTGTGGGTCTAGTAAGATT 60.070 38.462 0.00 0.00 33.30 2.40
2416 2944 6.599638 GCTCATTTGTGGGTCTAGTAAGATTT 59.400 38.462 0.00 0.00 33.30 2.17
2417 2945 7.121315 GCTCATTTGTGGGTCTAGTAAGATTTT 59.879 37.037 0.00 0.00 33.30 1.82
2418 2946 9.667107 CTCATTTGTGGGTCTAGTAAGATTTTA 57.333 33.333 0.00 0.00 33.30 1.52
2419 2947 9.444600 TCATTTGTGGGTCTAGTAAGATTTTAC 57.555 33.333 0.00 0.00 39.57 2.01
2421 2949 8.842358 TTTGTGGGTCTAGTAAGATTTTACTG 57.158 34.615 16.78 8.46 46.80 2.74
2422 2950 7.549147 TGTGGGTCTAGTAAGATTTTACTGT 57.451 36.000 16.78 0.00 46.80 3.55
2423 2951 7.970102 TGTGGGTCTAGTAAGATTTTACTGTT 58.030 34.615 16.78 0.00 46.80 3.16
2424 2952 7.876068 TGTGGGTCTAGTAAGATTTTACTGTTG 59.124 37.037 16.78 8.44 46.80 3.33
2425 2953 7.876582 GTGGGTCTAGTAAGATTTTACTGTTGT 59.123 37.037 16.78 0.00 46.80 3.32
2426 2954 7.876068 TGGGTCTAGTAAGATTTTACTGTTGTG 59.124 37.037 16.78 4.54 46.80 3.33
2427 2955 7.876582 GGGTCTAGTAAGATTTTACTGTTGTGT 59.123 37.037 16.78 0.00 46.80 3.72
2428 2956 8.709646 GGTCTAGTAAGATTTTACTGTTGTGTG 58.290 37.037 16.78 1.82 46.80 3.82
2429 2957 9.472361 GTCTAGTAAGATTTTACTGTTGTGTGA 57.528 33.333 16.78 3.64 46.80 3.58
2460 2988 8.524870 AAGATGATTTTGACTTAATGTTGTGC 57.475 30.769 0.00 0.00 0.00 4.57
2461 2989 7.092716 AGATGATTTTGACTTAATGTTGTGCC 58.907 34.615 0.00 0.00 0.00 5.01
2462 2990 5.537188 TGATTTTGACTTAATGTTGTGCCC 58.463 37.500 0.00 0.00 0.00 5.36
2463 2991 5.069648 TGATTTTGACTTAATGTTGTGCCCA 59.930 36.000 0.00 0.00 0.00 5.36
2464 2992 4.582701 TTTGACTTAATGTTGTGCCCAG 57.417 40.909 0.00 0.00 0.00 4.45
2465 2993 3.500448 TGACTTAATGTTGTGCCCAGA 57.500 42.857 0.00 0.00 0.00 3.86
2466 2994 4.032960 TGACTTAATGTTGTGCCCAGAT 57.967 40.909 0.00 0.00 0.00 2.90
2467 2995 4.406456 TGACTTAATGTTGTGCCCAGATT 58.594 39.130 0.00 0.00 0.00 2.40
2468 2996 5.565509 TGACTTAATGTTGTGCCCAGATTA 58.434 37.500 0.00 0.00 0.00 1.75
2469 2997 5.647658 TGACTTAATGTTGTGCCCAGATTAG 59.352 40.000 0.00 0.00 0.00 1.73
2470 2998 5.815581 ACTTAATGTTGTGCCCAGATTAGA 58.184 37.500 0.00 0.00 0.00 2.10
2471 2999 6.245408 ACTTAATGTTGTGCCCAGATTAGAA 58.755 36.000 0.00 0.00 0.00 2.10
2472 3000 6.151144 ACTTAATGTTGTGCCCAGATTAGAAC 59.849 38.462 0.00 0.00 0.00 3.01
2473 3001 2.790433 TGTTGTGCCCAGATTAGAACC 58.210 47.619 0.00 0.00 0.00 3.62
2474 3002 2.107378 TGTTGTGCCCAGATTAGAACCA 59.893 45.455 0.00 0.00 0.00 3.67
2475 3003 3.245229 TGTTGTGCCCAGATTAGAACCAT 60.245 43.478 0.00 0.00 0.00 3.55
2476 3004 3.003394 TGTGCCCAGATTAGAACCATG 57.997 47.619 0.00 0.00 0.00 3.66
2477 3005 2.308570 TGTGCCCAGATTAGAACCATGT 59.691 45.455 0.00 0.00 0.00 3.21
2478 3006 3.521531 TGTGCCCAGATTAGAACCATGTA 59.478 43.478 0.00 0.00 0.00 2.29
2479 3007 4.018870 TGTGCCCAGATTAGAACCATGTAA 60.019 41.667 0.00 0.00 0.00 2.41
2480 3008 5.133221 GTGCCCAGATTAGAACCATGTAAT 58.867 41.667 0.00 0.00 0.00 1.89
2481 3009 5.594317 GTGCCCAGATTAGAACCATGTAATT 59.406 40.000 0.00 0.00 0.00 1.40
2482 3010 5.593909 TGCCCAGATTAGAACCATGTAATTG 59.406 40.000 0.00 0.00 0.00 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.533730 CCATGCCTATAGATGAAAGTGGTTA 58.466 40.000 0.00 0.00 0.00 2.85
1 2 5.380043 CCATGCCTATAGATGAAAGTGGTT 58.620 41.667 0.00 0.00 0.00 3.67
133 134 1.742268 GACTCCCTCAATGCTTGCTTC 59.258 52.381 0.00 0.00 0.00 3.86
149 150 7.067494 ACCCATGCTTGAAATGTAAATAGACTC 59.933 37.037 0.22 0.00 0.00 3.36
163 164 2.392662 TGTTTCCAACCCATGCTTGAA 58.607 42.857 0.22 0.00 0.00 2.69
206 207 3.795101 GCACAATATCTTGCACATTCAGC 59.205 43.478 4.07 0.00 38.68 4.26
207 208 5.244785 AGCACAATATCTTGCACATTCAG 57.755 39.130 10.31 0.00 41.48 3.02
263 264 3.176924 AGTGGACCTGAAGCTCTAAGA 57.823 47.619 0.00 0.00 0.00 2.10
342 343 6.061441 TCTCTTTTGCAAACCTCATTAGTGA 58.939 36.000 12.39 8.24 0.00 3.41
362 363 5.948758 GGGAAAACCTTGATTGATCTTCTCT 59.051 40.000 0.00 0.00 35.85 3.10
540 541 1.816224 GATTAGCAAAGGGGCGTTCAA 59.184 47.619 0.00 0.00 39.27 2.69
541 542 1.459450 GATTAGCAAAGGGGCGTTCA 58.541 50.000 0.00 0.00 39.27 3.18
543 544 1.029947 CCGATTAGCAAAGGGGCGTT 61.030 55.000 0.00 0.00 39.27 4.84
545 546 0.535102 ATCCGATTAGCAAAGGGGCG 60.535 55.000 0.00 0.00 39.27 6.13
546 547 0.954452 CATCCGATTAGCAAAGGGGC 59.046 55.000 0.00 0.00 0.00 5.80
547 548 1.609208 CCATCCGATTAGCAAAGGGG 58.391 55.000 0.00 0.00 0.00 4.79
561 662 3.149196 ACCATGTTATCGATTGCCATCC 58.851 45.455 1.71 0.00 0.00 3.51
943 1426 6.770303 TCATTCAAGATTCAGTGTTGTAACCA 59.230 34.615 0.00 0.00 33.11 3.67
993 1477 8.477419 TCTTTTGAAACCTATCCATGTTCTTT 57.523 30.769 0.00 0.00 0.00 2.52
1033 1517 2.171448 GAGGGTCATAGCCATTGTCACT 59.829 50.000 0.00 0.00 38.48 3.41
1061 1545 2.459644 TGCCCCAATCAAAATCCTCAG 58.540 47.619 0.00 0.00 0.00 3.35
1089 1573 1.737793 GGAGCTATTGTTGGGTCAACG 59.262 52.381 6.34 0.00 46.13 4.10
1134 1618 5.078949 ACAAGTTCCCATGAAATGTCATCA 58.921 37.500 0.00 0.00 44.81 3.07
1152 1636 2.233271 CCAACAGCCTCATCAACAAGT 58.767 47.619 0.00 0.00 0.00 3.16
1230 1714 6.317893 GGTACTGTACATTAACATTTGAGGGG 59.682 42.308 18.79 0.00 0.00 4.79
1248 1732 0.107831 TGCGCTTCCTTTGGTACTGT 59.892 50.000 9.73 0.00 0.00 3.55
1261 1745 2.914097 AGCAGCCCTTTTGCGCTT 60.914 55.556 9.73 0.00 45.98 4.68
1324 1808 6.295802 CCATTGGGGATACTTGATTGTTGTTT 60.296 38.462 0.00 0.00 40.01 2.83
1633 2132 8.506168 AAACAGAGAGTAAATGACAGAACAAA 57.494 30.769 0.00 0.00 0.00 2.83
1729 2246 6.350445 CCCATTTGTTCCTTCCACAATAGAAG 60.350 42.308 0.00 0.00 40.39 2.85
1747 2264 3.196254 CCTCCCATCTTGTTTCCCATTTG 59.804 47.826 0.00 0.00 0.00 2.32
1819 2336 4.102210 AGCAGCCATGAGTAGACATGTAAT 59.898 41.667 0.00 0.00 44.00 1.89
1857 2375 1.090052 GCGGCGCCTTAGACAAGAAT 61.090 55.000 26.68 0.00 33.20 2.40
1918 2446 2.726351 GGCTCAACTCCTAGGCGCT 61.726 63.158 7.64 0.00 0.00 5.92
1919 2447 2.202946 GGCTCAACTCCTAGGCGC 60.203 66.667 2.96 0.00 0.00 6.53
1920 2448 2.501610 GGGCTCAACTCCTAGGCG 59.498 66.667 2.96 0.00 39.08 5.52
1937 2465 2.710902 GCTTTAAGGCGCTTGGGGG 61.711 63.158 7.64 0.00 0.00 5.40
1938 2466 2.885113 GCTTTAAGGCGCTTGGGG 59.115 61.111 7.64 0.00 0.00 4.96
1946 2474 2.298593 CGTCTAGGCGCTTTAAGGC 58.701 57.895 2.68 0.00 0.00 4.35
1957 2485 4.567159 GTCTATGTTTTCAAGGCGTCTAGG 59.433 45.833 0.00 0.00 0.00 3.02
1958 2486 5.411781 AGTCTATGTTTTCAAGGCGTCTAG 58.588 41.667 0.00 0.00 0.00 2.43
1959 2487 5.401531 AGTCTATGTTTTCAAGGCGTCTA 57.598 39.130 0.00 0.00 0.00 2.59
1960 2488 4.273148 AGTCTATGTTTTCAAGGCGTCT 57.727 40.909 0.00 0.00 0.00 4.18
1961 2489 5.006746 CCATAGTCTATGTTTTCAAGGCGTC 59.993 44.000 16.89 0.00 34.36 5.19
1962 2490 4.876107 CCATAGTCTATGTTTTCAAGGCGT 59.124 41.667 16.89 0.00 34.36 5.68
1963 2491 4.260784 GCCATAGTCTATGTTTTCAAGGCG 60.261 45.833 16.89 1.29 34.36 5.52
1964 2492 4.260784 CGCCATAGTCTATGTTTTCAAGGC 60.261 45.833 16.89 10.29 34.36 4.35
1965 2493 4.260784 GCGCCATAGTCTATGTTTTCAAGG 60.261 45.833 16.89 2.43 34.36 3.61
1966 2494 4.260784 GGCGCCATAGTCTATGTTTTCAAG 60.261 45.833 24.80 3.14 34.36 3.02
1967 2495 3.625764 GGCGCCATAGTCTATGTTTTCAA 59.374 43.478 24.80 0.00 34.36 2.69
1968 2496 3.202906 GGCGCCATAGTCTATGTTTTCA 58.797 45.455 24.80 0.00 34.36 2.69
1969 2497 2.221055 CGGCGCCATAGTCTATGTTTTC 59.779 50.000 28.98 5.08 34.36 2.29
1970 2498 2.210116 CGGCGCCATAGTCTATGTTTT 58.790 47.619 28.98 0.00 34.36 2.43
1971 2499 1.865865 CGGCGCCATAGTCTATGTTT 58.134 50.000 28.98 0.00 34.36 2.83
1972 2500 0.600255 GCGGCGCCATAGTCTATGTT 60.600 55.000 28.98 0.00 34.36 2.71
1973 2501 1.006102 GCGGCGCCATAGTCTATGT 60.006 57.895 28.98 0.00 34.36 2.29
1974 2502 0.526211 TAGCGGCGCCATAGTCTATG 59.474 55.000 30.40 12.29 35.94 2.23
1975 2503 1.254026 TTAGCGGCGCCATAGTCTAT 58.746 50.000 30.40 9.19 0.00 1.98
1976 2504 1.254026 ATTAGCGGCGCCATAGTCTA 58.746 50.000 30.40 15.23 0.00 2.59
1977 2505 1.202582 CTATTAGCGGCGCCATAGTCT 59.797 52.381 30.40 16.25 0.00 3.24
1978 2506 1.630148 CTATTAGCGGCGCCATAGTC 58.370 55.000 30.40 9.37 0.00 2.59
1979 2507 0.389948 GCTATTAGCGGCGCCATAGT 60.390 55.000 32.42 20.17 29.89 2.12
1980 2508 0.389817 TGCTATTAGCGGCGCCATAG 60.390 55.000 30.31 30.31 46.26 2.23
1981 2509 0.249120 ATGCTATTAGCGGCGCCATA 59.751 50.000 30.40 22.71 46.26 2.74
1982 2510 1.003355 ATGCTATTAGCGGCGCCAT 60.003 52.632 30.40 22.82 46.26 4.40
1983 2511 1.960763 CATGCTATTAGCGGCGCCA 60.961 57.895 30.40 18.62 46.26 5.69
1984 2512 2.863153 CATGCTATTAGCGGCGCC 59.137 61.111 30.40 19.07 46.26 6.53
1985 2513 1.014044 TAGCATGCTATTAGCGGCGC 61.014 55.000 26.86 26.86 46.26 6.53
1986 2514 1.645034 ATAGCATGCTATTAGCGGCG 58.355 50.000 30.43 0.51 46.26 6.46
1987 2515 3.553511 CACTATAGCATGCTATTAGCGGC 59.446 47.826 37.80 18.97 46.26 6.53
1988 2516 4.564372 CACACTATAGCATGCTATTAGCGG 59.436 45.833 37.80 26.74 46.26 5.52
1989 2517 5.164233 ACACACTATAGCATGCTATTAGCG 58.836 41.667 37.80 26.90 46.26 4.26
1990 2518 8.534333 TTTACACACTATAGCATGCTATTAGC 57.466 34.615 37.80 8.80 42.82 3.09
1991 2519 9.914131 TCTTTACACACTATAGCATGCTATTAG 57.086 33.333 37.80 30.81 39.65 1.73
1992 2520 9.914131 CTCTTTACACACTATAGCATGCTATTA 57.086 33.333 37.80 23.15 39.65 0.98
1993 2521 8.424918 ACTCTTTACACACTATAGCATGCTATT 58.575 33.333 37.80 24.08 39.65 1.73
1994 2522 7.957002 ACTCTTTACACACTATAGCATGCTAT 58.043 34.615 35.68 35.68 41.58 2.97
1995 2523 7.348080 ACTCTTTACACACTATAGCATGCTA 57.652 36.000 28.72 28.72 0.00 3.49
1996 2524 6.227298 ACTCTTTACACACTATAGCATGCT 57.773 37.500 25.99 25.99 0.00 3.79
1997 2525 6.313905 ACAACTCTTTACACACTATAGCATGC 59.686 38.462 10.51 10.51 0.00 4.06
1998 2526 7.761704 AGACAACTCTTTACACACTATAGCATG 59.238 37.037 0.00 0.85 0.00 4.06
1999 2527 7.841956 AGACAACTCTTTACACACTATAGCAT 58.158 34.615 0.00 0.00 0.00 3.79
2000 2528 7.228314 AGACAACTCTTTACACACTATAGCA 57.772 36.000 0.00 0.00 0.00 3.49
2001 2529 6.469595 CGAGACAACTCTTTACACACTATAGC 59.530 42.308 0.00 0.00 40.65 2.97
2002 2530 6.469595 GCGAGACAACTCTTTACACACTATAG 59.530 42.308 0.00 0.00 40.65 1.31
2003 2531 6.150641 AGCGAGACAACTCTTTACACACTATA 59.849 38.462 0.00 0.00 40.65 1.31
2004 2532 5.047943 AGCGAGACAACTCTTTACACACTAT 60.048 40.000 0.00 0.00 40.65 2.12
2005 2533 4.277672 AGCGAGACAACTCTTTACACACTA 59.722 41.667 0.00 0.00 40.65 2.74
2006 2534 3.068307 AGCGAGACAACTCTTTACACACT 59.932 43.478 0.00 0.00 40.65 3.55
2007 2535 3.381949 AGCGAGACAACTCTTTACACAC 58.618 45.455 0.00 0.00 40.65 3.82
2008 2536 3.728076 AGCGAGACAACTCTTTACACA 57.272 42.857 0.00 0.00 40.65 3.72
2009 2537 6.707599 ATTTAGCGAGACAACTCTTTACAC 57.292 37.500 0.00 0.00 40.65 2.90
2010 2538 7.724305 AAATTTAGCGAGACAACTCTTTACA 57.276 32.000 0.00 0.00 40.65 2.41
2013 2541 8.784043 ACAATAAATTTAGCGAGACAACTCTTT 58.216 29.630 3.94 0.00 40.65 2.52
2014 2542 8.230486 CACAATAAATTTAGCGAGACAACTCTT 58.770 33.333 3.94 0.00 40.65 2.85
2015 2543 7.387948 ACACAATAAATTTAGCGAGACAACTCT 59.612 33.333 3.94 0.00 40.65 3.24
2016 2544 7.519002 ACACAATAAATTTAGCGAGACAACTC 58.481 34.615 3.94 0.00 39.54 3.01
2017 2545 7.435068 ACACAATAAATTTAGCGAGACAACT 57.565 32.000 3.94 0.00 0.00 3.16
2018 2546 8.225107 TGTACACAATAAATTTAGCGAGACAAC 58.775 33.333 3.94 0.00 0.00 3.32
2019 2547 8.312896 TGTACACAATAAATTTAGCGAGACAA 57.687 30.769 3.94 0.00 0.00 3.18
2020 2548 7.892778 TGTACACAATAAATTTAGCGAGACA 57.107 32.000 3.94 1.71 0.00 3.41
2021 2549 9.210426 CATTGTACACAATAAATTTAGCGAGAC 57.790 33.333 7.25 0.00 44.10 3.36
2022 2550 8.941977 ACATTGTACACAATAAATTTAGCGAGA 58.058 29.630 7.25 0.00 44.10 4.04
2023 2551 9.210426 GACATTGTACACAATAAATTTAGCGAG 57.790 33.333 7.25 0.00 44.10 5.03
2024 2552 8.941977 AGACATTGTACACAATAAATTTAGCGA 58.058 29.630 7.25 0.00 44.10 4.93
2025 2553 9.554724 AAGACATTGTACACAATAAATTTAGCG 57.445 29.630 7.25 0.06 44.10 4.26
2029 2557 9.195411 CAGCAAGACATTGTACACAATAAATTT 57.805 29.630 7.25 0.00 44.10 1.82
2030 2558 8.575589 TCAGCAAGACATTGTACACAATAAATT 58.424 29.630 7.25 0.90 44.10 1.82
2031 2559 8.109705 TCAGCAAGACATTGTACACAATAAAT 57.890 30.769 7.25 0.00 44.10 1.40
2032 2560 7.503521 TCAGCAAGACATTGTACACAATAAA 57.496 32.000 7.25 0.00 44.10 1.40
2033 2561 7.686438 ATCAGCAAGACATTGTACACAATAA 57.314 32.000 7.25 0.00 44.10 1.40
2034 2562 7.011389 GCTATCAGCAAGACATTGTACACAATA 59.989 37.037 7.25 0.00 41.74 1.90
2035 2563 6.183360 GCTATCAGCAAGACATTGTACACAAT 60.183 38.462 0.00 1.70 43.11 2.71
2036 2564 5.122239 GCTATCAGCAAGACATTGTACACAA 59.878 40.000 0.00 0.00 41.89 3.33
2037 2565 4.631377 GCTATCAGCAAGACATTGTACACA 59.369 41.667 0.00 0.00 41.89 3.72
2038 2566 5.149054 GCTATCAGCAAGACATTGTACAC 57.851 43.478 0.00 0.00 41.89 2.90
2052 2580 3.406764 CCCCTGAAAGTATGCTATCAGC 58.593 50.000 0.00 0.00 42.82 4.26
2053 2581 3.072184 AGCCCCTGAAAGTATGCTATCAG 59.928 47.826 0.00 0.00 39.16 2.90
2054 2582 3.048600 AGCCCCTGAAAGTATGCTATCA 58.951 45.455 0.00 0.00 29.94 2.15
2055 2583 3.406764 CAGCCCCTGAAAGTATGCTATC 58.593 50.000 0.00 0.00 32.44 2.08
2056 2584 2.487986 GCAGCCCCTGAAAGTATGCTAT 60.488 50.000 0.00 0.00 32.44 2.97
2057 2585 1.134098 GCAGCCCCTGAAAGTATGCTA 60.134 52.381 0.00 0.00 32.44 3.49
2058 2586 0.394899 GCAGCCCCTGAAAGTATGCT 60.395 55.000 0.00 0.00 32.44 3.79
2059 2587 1.718757 CGCAGCCCCTGAAAGTATGC 61.719 60.000 0.00 0.00 32.44 3.14
2060 2588 2.397751 CGCAGCCCCTGAAAGTATG 58.602 57.895 0.00 0.00 32.44 2.39
2061 2589 4.963878 CGCAGCCCCTGAAAGTAT 57.036 55.556 0.00 0.00 32.44 2.12
2078 2606 8.782533 AAAAATAGCGTGCTATACAAAATAGC 57.217 30.769 14.33 9.54 45.28 2.97
2118 2646 9.607988 TCGTGACATAAACCAAATACTATCAAT 57.392 29.630 0.00 0.00 0.00 2.57
2119 2647 9.438228 TTCGTGACATAAACCAAATACTATCAA 57.562 29.630 0.00 0.00 0.00 2.57
2120 2648 9.093970 CTTCGTGACATAAACCAAATACTATCA 57.906 33.333 0.00 0.00 0.00 2.15
2121 2649 8.062448 GCTTCGTGACATAAACCAAATACTATC 58.938 37.037 0.00 0.00 0.00 2.08
2122 2650 7.012044 GGCTTCGTGACATAAACCAAATACTAT 59.988 37.037 0.00 0.00 0.00 2.12
2123 2651 6.314400 GGCTTCGTGACATAAACCAAATACTA 59.686 38.462 0.00 0.00 0.00 1.82
2124 2652 5.123344 GGCTTCGTGACATAAACCAAATACT 59.877 40.000 0.00 0.00 0.00 2.12
2125 2653 5.329493 GGCTTCGTGACATAAACCAAATAC 58.671 41.667 0.00 0.00 0.00 1.89
2126 2654 4.396790 GGGCTTCGTGACATAAACCAAATA 59.603 41.667 0.00 0.00 0.00 1.40
2127 2655 3.192633 GGGCTTCGTGACATAAACCAAAT 59.807 43.478 0.00 0.00 0.00 2.32
2128 2656 2.554893 GGGCTTCGTGACATAAACCAAA 59.445 45.455 0.00 0.00 0.00 3.28
2129 2657 2.156098 GGGCTTCGTGACATAAACCAA 58.844 47.619 0.00 0.00 0.00 3.67
2130 2658 1.072489 TGGGCTTCGTGACATAAACCA 59.928 47.619 0.00 0.00 0.00 3.67
2131 2659 1.816074 TGGGCTTCGTGACATAAACC 58.184 50.000 0.00 0.00 0.00 3.27
2132 2660 4.165779 CAAATGGGCTTCGTGACATAAAC 58.834 43.478 0.00 0.00 0.00 2.01
2133 2661 3.823873 ACAAATGGGCTTCGTGACATAAA 59.176 39.130 0.00 0.00 0.00 1.40
2134 2662 3.417101 ACAAATGGGCTTCGTGACATAA 58.583 40.909 0.00 0.00 0.00 1.90
2135 2663 3.066291 ACAAATGGGCTTCGTGACATA 57.934 42.857 0.00 0.00 0.00 2.29
2136 2664 1.909700 ACAAATGGGCTTCGTGACAT 58.090 45.000 0.00 0.00 0.00 3.06
2137 2665 1.686355 AACAAATGGGCTTCGTGACA 58.314 45.000 0.00 0.00 0.00 3.58
2138 2666 3.907894 TTAACAAATGGGCTTCGTGAC 57.092 42.857 0.00 0.00 0.00 3.67
2139 2667 3.632604 TGTTTAACAAATGGGCTTCGTGA 59.367 39.130 0.00 0.00 0.00 4.35
2140 2668 3.971150 TGTTTAACAAATGGGCTTCGTG 58.029 40.909 0.00 0.00 0.00 4.35
2141 2669 4.142138 TGTTGTTTAACAAATGGGCTTCGT 60.142 37.500 12.37 0.00 43.47 3.85
2142 2670 4.363999 TGTTGTTTAACAAATGGGCTTCG 58.636 39.130 12.37 0.00 43.47 3.79
2153 2681 6.288294 AGCTGATACTGAGTGTTGTTTAACA 58.712 36.000 0.00 0.00 44.17 2.41
2154 2682 6.787085 AGCTGATACTGAGTGTTGTTTAAC 57.213 37.500 0.00 0.00 37.32 2.01
2155 2683 6.584942 CGTAGCTGATACTGAGTGTTGTTTAA 59.415 38.462 0.00 0.00 31.68 1.52
2156 2684 6.090783 CGTAGCTGATACTGAGTGTTGTTTA 58.909 40.000 0.00 0.00 31.68 2.01
2157 2685 4.923871 CGTAGCTGATACTGAGTGTTGTTT 59.076 41.667 0.00 0.00 31.68 2.83
2158 2686 4.486090 CGTAGCTGATACTGAGTGTTGTT 58.514 43.478 0.00 0.00 31.68 2.83
2159 2687 3.119459 CCGTAGCTGATACTGAGTGTTGT 60.119 47.826 0.00 0.00 31.68 3.32
2160 2688 3.128764 TCCGTAGCTGATACTGAGTGTTG 59.871 47.826 0.00 0.00 31.68 3.33
2161 2689 3.353557 TCCGTAGCTGATACTGAGTGTT 58.646 45.455 0.00 0.00 31.68 3.32
2162 2690 3.000684 TCCGTAGCTGATACTGAGTGT 57.999 47.619 0.00 0.00 31.68 3.55
2163 2691 4.106197 GTTTCCGTAGCTGATACTGAGTG 58.894 47.826 0.00 0.00 30.43 3.51
2164 2692 4.017808 AGTTTCCGTAGCTGATACTGAGT 58.982 43.478 0.00 0.00 30.43 3.41
2165 2693 4.640789 AGTTTCCGTAGCTGATACTGAG 57.359 45.455 0.00 0.00 30.43 3.35
2166 2694 4.337555 GGTAGTTTCCGTAGCTGATACTGA 59.662 45.833 0.00 0.00 31.68 3.41
2167 2695 4.097437 TGGTAGTTTCCGTAGCTGATACTG 59.903 45.833 0.00 0.00 31.68 2.74
2168 2696 4.275810 TGGTAGTTTCCGTAGCTGATACT 58.724 43.478 0.00 0.00 31.68 2.12
2169 2697 4.644103 TGGTAGTTTCCGTAGCTGATAC 57.356 45.455 0.00 0.00 0.00 2.24
2170 2698 5.864418 AATGGTAGTTTCCGTAGCTGATA 57.136 39.130 0.00 0.00 0.00 2.15
2171 2699 4.755266 AATGGTAGTTTCCGTAGCTGAT 57.245 40.909 0.00 0.00 0.00 2.90
2172 2700 4.708421 ACTAATGGTAGTTTCCGTAGCTGA 59.292 41.667 0.00 0.00 37.25 4.26
2173 2701 5.007385 ACTAATGGTAGTTTCCGTAGCTG 57.993 43.478 0.00 0.00 37.25 4.24
2174 2702 5.046807 ACAACTAATGGTAGTTTCCGTAGCT 60.047 40.000 0.00 0.00 46.38 3.32
2175 2703 5.173664 ACAACTAATGGTAGTTTCCGTAGC 58.826 41.667 0.00 0.00 46.38 3.58
2176 2704 7.542025 AGTACAACTAATGGTAGTTTCCGTAG 58.458 38.462 0.00 0.00 46.38 3.51
2177 2705 7.466746 AGTACAACTAATGGTAGTTTCCGTA 57.533 36.000 0.00 0.00 46.38 4.02
2178 2706 6.350629 AGTACAACTAATGGTAGTTTCCGT 57.649 37.500 0.00 0.00 46.38 4.69
2179 2707 8.937634 ATTAGTACAACTAATGGTAGTTTCCG 57.062 34.615 10.69 0.00 46.38 4.30
2236 2764 6.692486 AGACACCATTGTTTTTGTACAAACA 58.308 32.000 20.43 14.15 43.42 2.83
2237 2765 7.971722 ACTAGACACCATTGTTTTTGTACAAAC 59.028 33.333 20.43 11.64 41.02 2.93
2238 2766 8.057536 ACTAGACACCATTGTTTTTGTACAAA 57.942 30.769 17.01 17.01 41.02 2.83
2239 2767 7.633193 ACTAGACACCATTGTTTTTGTACAA 57.367 32.000 3.59 3.59 41.81 2.41
2240 2768 7.633193 AACTAGACACCATTGTTTTTGTACA 57.367 32.000 0.00 0.00 35.47 2.90
2241 2769 9.607285 CATAACTAGACACCATTGTTTTTGTAC 57.393 33.333 0.00 0.00 35.47 2.90
2242 2770 9.344772 ACATAACTAGACACCATTGTTTTTGTA 57.655 29.630 0.00 0.00 35.47 2.41
2243 2771 8.232913 ACATAACTAGACACCATTGTTTTTGT 57.767 30.769 0.00 0.00 35.47 2.83
2244 2772 8.967218 CAACATAACTAGACACCATTGTTTTTG 58.033 33.333 0.00 0.00 35.47 2.44
2245 2773 8.908903 TCAACATAACTAGACACCATTGTTTTT 58.091 29.630 0.00 0.00 35.47 1.94
2246 2774 8.458573 TCAACATAACTAGACACCATTGTTTT 57.541 30.769 0.00 0.00 35.47 2.43
2247 2775 7.936847 TCTCAACATAACTAGACACCATTGTTT 59.063 33.333 0.00 0.00 35.47 2.83
2248 2776 7.450074 TCTCAACATAACTAGACACCATTGTT 58.550 34.615 0.00 0.00 35.47 2.83
2249 2777 7.004555 TCTCAACATAACTAGACACCATTGT 57.995 36.000 0.00 0.00 39.32 2.71
2250 2778 6.036517 GCTCTCAACATAACTAGACACCATTG 59.963 42.308 0.00 0.00 0.00 2.82
2251 2779 6.070538 AGCTCTCAACATAACTAGACACCATT 60.071 38.462 0.00 0.00 0.00 3.16
2252 2780 5.423610 AGCTCTCAACATAACTAGACACCAT 59.576 40.000 0.00 0.00 0.00 3.55
2253 2781 4.772624 AGCTCTCAACATAACTAGACACCA 59.227 41.667 0.00 0.00 0.00 4.17
2254 2782 5.331876 AGCTCTCAACATAACTAGACACC 57.668 43.478 0.00 0.00 0.00 4.16
2255 2783 8.293867 CCTATAGCTCTCAACATAACTAGACAC 58.706 40.741 0.00 0.00 0.00 3.67
2256 2784 7.040340 GCCTATAGCTCTCAACATAACTAGACA 60.040 40.741 0.00 0.00 38.99 3.41
2257 2785 7.040340 TGCCTATAGCTCTCAACATAACTAGAC 60.040 40.741 0.00 0.00 44.23 2.59
2258 2786 7.004691 TGCCTATAGCTCTCAACATAACTAGA 58.995 38.462 0.00 0.00 44.23 2.43
2259 2787 7.220741 TGCCTATAGCTCTCAACATAACTAG 57.779 40.000 0.00 0.00 44.23 2.57
2260 2788 7.782897 ATGCCTATAGCTCTCAACATAACTA 57.217 36.000 0.00 0.00 44.23 2.24
2261 2789 6.678568 ATGCCTATAGCTCTCAACATAACT 57.321 37.500 0.00 0.00 44.23 2.24
2262 2790 8.877779 CATTATGCCTATAGCTCTCAACATAAC 58.122 37.037 11.40 0.00 44.23 1.89
2263 2791 8.815912 TCATTATGCCTATAGCTCTCAACATAA 58.184 33.333 11.51 11.51 44.23 1.90
2264 2792 8.366359 TCATTATGCCTATAGCTCTCAACATA 57.634 34.615 0.00 0.00 44.23 2.29
2265 2793 7.250032 TCATTATGCCTATAGCTCTCAACAT 57.750 36.000 0.00 0.00 44.23 2.71
2266 2794 6.670695 TCATTATGCCTATAGCTCTCAACA 57.329 37.500 0.00 0.00 44.23 3.33
2267 2795 7.605691 ACAATCATTATGCCTATAGCTCTCAAC 59.394 37.037 0.00 0.00 44.23 3.18
2268 2796 7.683578 ACAATCATTATGCCTATAGCTCTCAA 58.316 34.615 0.00 0.00 44.23 3.02
2269 2797 7.038799 TGACAATCATTATGCCTATAGCTCTCA 60.039 37.037 0.00 0.00 44.23 3.27
2270 2798 7.326454 TGACAATCATTATGCCTATAGCTCTC 58.674 38.462 0.00 0.00 44.23 3.20
2271 2799 7.250032 TGACAATCATTATGCCTATAGCTCT 57.750 36.000 0.00 0.00 44.23 4.09
2272 2800 9.775854 ATATGACAATCATTATGCCTATAGCTC 57.224 33.333 0.00 0.00 39.25 4.09
2273 2801 9.775854 GATATGACAATCATTATGCCTATAGCT 57.224 33.333 0.00 0.00 39.25 3.32
2274 2802 9.551734 TGATATGACAATCATTATGCCTATAGC 57.448 33.333 0.00 0.00 38.26 2.97
2279 2807 9.404848 CCTATTGATATGACAATCATTATGCCT 57.595 33.333 0.00 0.00 40.36 4.75
2280 2808 9.399797 TCCTATTGATATGACAATCATTATGCC 57.600 33.333 0.00 0.00 40.36 4.40
2303 2831 8.774586 GCATTTTCAACGTCTTATGTATATCCT 58.225 33.333 0.00 0.00 0.00 3.24
2304 2832 8.556194 TGCATTTTCAACGTCTTATGTATATCC 58.444 33.333 0.00 0.00 0.00 2.59
2306 2834 9.882996 CATGCATTTTCAACGTCTTATGTATAT 57.117 29.630 0.00 0.00 0.00 0.86
2307 2835 8.341903 CCATGCATTTTCAACGTCTTATGTATA 58.658 33.333 0.00 0.00 0.00 1.47
2308 2836 7.195646 CCATGCATTTTCAACGTCTTATGTAT 58.804 34.615 0.00 0.00 0.00 2.29
2309 2837 6.550843 CCATGCATTTTCAACGTCTTATGTA 58.449 36.000 0.00 0.00 0.00 2.29
2310 2838 5.401550 CCATGCATTTTCAACGTCTTATGT 58.598 37.500 0.00 0.00 0.00 2.29
2311 2839 4.266029 GCCATGCATTTTCAACGTCTTATG 59.734 41.667 0.00 0.00 0.00 1.90
2312 2840 4.423732 GCCATGCATTTTCAACGTCTTAT 58.576 39.130 0.00 0.00 0.00 1.73
2313 2841 3.366883 GGCCATGCATTTTCAACGTCTTA 60.367 43.478 0.00 0.00 0.00 2.10
2314 2842 2.610232 GGCCATGCATTTTCAACGTCTT 60.610 45.455 0.00 0.00 0.00 3.01
2315 2843 1.067635 GGCCATGCATTTTCAACGTCT 60.068 47.619 0.00 0.00 0.00 4.18
2316 2844 1.336702 TGGCCATGCATTTTCAACGTC 60.337 47.619 0.00 0.00 0.00 4.34
2317 2845 0.678395 TGGCCATGCATTTTCAACGT 59.322 45.000 0.00 0.00 0.00 3.99
2318 2846 1.067706 TCTGGCCATGCATTTTCAACG 60.068 47.619 5.51 0.00 0.00 4.10
2319 2847 2.747396 TCTGGCCATGCATTTTCAAC 57.253 45.000 5.51 0.00 0.00 3.18
2320 2848 3.261137 TGATTCTGGCCATGCATTTTCAA 59.739 39.130 5.51 0.00 0.00 2.69
2321 2849 2.832733 TGATTCTGGCCATGCATTTTCA 59.167 40.909 5.51 0.00 0.00 2.69
2322 2850 3.192466 GTGATTCTGGCCATGCATTTTC 58.808 45.455 5.51 0.00 0.00 2.29
2323 2851 2.568062 TGTGATTCTGGCCATGCATTTT 59.432 40.909 5.51 0.00 0.00 1.82
2324 2852 2.093869 GTGTGATTCTGGCCATGCATTT 60.094 45.455 5.51 0.00 0.00 2.32
2325 2853 1.479323 GTGTGATTCTGGCCATGCATT 59.521 47.619 5.51 0.00 0.00 3.56
2326 2854 1.108776 GTGTGATTCTGGCCATGCAT 58.891 50.000 5.51 0.00 0.00 3.96
2327 2855 0.038599 AGTGTGATTCTGGCCATGCA 59.961 50.000 5.51 0.00 0.00 3.96
2328 2856 1.133790 GAAGTGTGATTCTGGCCATGC 59.866 52.381 5.51 0.00 0.00 4.06
2329 2857 2.681848 GAGAAGTGTGATTCTGGCCATG 59.318 50.000 5.51 0.00 39.63 3.66
2330 2858 2.306805 TGAGAAGTGTGATTCTGGCCAT 59.693 45.455 5.51 0.00 39.63 4.40
2331 2859 1.699083 TGAGAAGTGTGATTCTGGCCA 59.301 47.619 4.71 4.71 39.63 5.36
2332 2860 2.079925 GTGAGAAGTGTGATTCTGGCC 58.920 52.381 0.00 0.00 39.63 5.36
2333 2861 2.079925 GGTGAGAAGTGTGATTCTGGC 58.920 52.381 0.00 0.00 39.63 4.85
2334 2862 3.692257 AGGTGAGAAGTGTGATTCTGG 57.308 47.619 0.00 0.00 39.63 3.86
2335 2863 5.755813 CAAAAGGTGAGAAGTGTGATTCTG 58.244 41.667 0.00 0.00 39.63 3.02
2336 2864 4.276926 GCAAAAGGTGAGAAGTGTGATTCT 59.723 41.667 0.00 0.00 42.23 2.40
2337 2865 4.540824 GCAAAAGGTGAGAAGTGTGATTC 58.459 43.478 0.00 0.00 0.00 2.52
2338 2866 3.319122 GGCAAAAGGTGAGAAGTGTGATT 59.681 43.478 0.00 0.00 0.00 2.57
2339 2867 2.887152 GGCAAAAGGTGAGAAGTGTGAT 59.113 45.455 0.00 0.00 0.00 3.06
2340 2868 2.297701 GGCAAAAGGTGAGAAGTGTGA 58.702 47.619 0.00 0.00 0.00 3.58
2341 2869 2.023673 TGGCAAAAGGTGAGAAGTGTG 58.976 47.619 0.00 0.00 0.00 3.82
2342 2870 2.435372 TGGCAAAAGGTGAGAAGTGT 57.565 45.000 0.00 0.00 0.00 3.55
2343 2871 5.649782 AATATGGCAAAAGGTGAGAAGTG 57.350 39.130 0.00 0.00 0.00 3.16
2344 2872 5.888161 CCTAATATGGCAAAAGGTGAGAAGT 59.112 40.000 0.00 0.00 0.00 3.01
2345 2873 5.300286 CCCTAATATGGCAAAAGGTGAGAAG 59.700 44.000 0.00 0.00 0.00 2.85
2346 2874 5.200483 CCCTAATATGGCAAAAGGTGAGAA 58.800 41.667 0.00 0.00 0.00 2.87
2347 2875 4.386312 CCCCTAATATGGCAAAAGGTGAGA 60.386 45.833 0.00 0.00 0.00 3.27
2348 2876 3.891366 CCCCTAATATGGCAAAAGGTGAG 59.109 47.826 0.00 0.00 0.00 3.51
2349 2877 3.529734 TCCCCTAATATGGCAAAAGGTGA 59.470 43.478 0.00 0.00 0.00 4.02
2350 2878 3.636764 GTCCCCTAATATGGCAAAAGGTG 59.363 47.826 0.00 0.00 0.00 4.00
2351 2879 3.531814 AGTCCCCTAATATGGCAAAAGGT 59.468 43.478 0.00 0.00 0.00 3.50
2352 2880 4.184649 AGTCCCCTAATATGGCAAAAGG 57.815 45.455 0.00 0.00 0.00 3.11
2353 2881 4.956075 ACAAGTCCCCTAATATGGCAAAAG 59.044 41.667 0.00 0.00 0.00 2.27
2354 2882 4.941713 ACAAGTCCCCTAATATGGCAAAA 58.058 39.130 0.00 0.00 0.00 2.44
2355 2883 4.601406 ACAAGTCCCCTAATATGGCAAA 57.399 40.909 0.00 0.00 0.00 3.68
2356 2884 4.601406 AACAAGTCCCCTAATATGGCAA 57.399 40.909 0.00 0.00 0.00 4.52
2357 2885 4.264172 ACAAACAAGTCCCCTAATATGGCA 60.264 41.667 0.00 0.00 0.00 4.92
2358 2886 4.097892 CACAAACAAGTCCCCTAATATGGC 59.902 45.833 0.00 0.00 0.00 4.40
2359 2887 5.261216 ACACAAACAAGTCCCCTAATATGG 58.739 41.667 0.00 0.00 0.00 2.74
2360 2888 7.148137 GGTTACACAAACAAGTCCCCTAATATG 60.148 40.741 0.00 0.00 40.08 1.78
2361 2889 6.888088 GGTTACACAAACAAGTCCCCTAATAT 59.112 38.462 0.00 0.00 40.08 1.28
2362 2890 6.183361 TGGTTACACAAACAAGTCCCCTAATA 60.183 38.462 0.00 0.00 40.08 0.98
2363 2891 5.074804 GGTTACACAAACAAGTCCCCTAAT 58.925 41.667 0.00 0.00 40.08 1.73
2364 2892 4.079901 TGGTTACACAAACAAGTCCCCTAA 60.080 41.667 0.00 0.00 40.08 2.69
2365 2893 3.458857 TGGTTACACAAACAAGTCCCCTA 59.541 43.478 0.00 0.00 40.08 3.53
2366 2894 2.242708 TGGTTACACAAACAAGTCCCCT 59.757 45.455 0.00 0.00 40.08 4.79
2367 2895 2.657143 TGGTTACACAAACAAGTCCCC 58.343 47.619 0.00 0.00 40.08 4.81
2373 2901 4.265893 TGAGCTCTTGGTTACACAAACAA 58.734 39.130 16.19 0.00 39.04 2.83
2374 2902 3.879998 TGAGCTCTTGGTTACACAAACA 58.120 40.909 16.19 0.00 40.08 2.83
2375 2903 5.438761 AATGAGCTCTTGGTTACACAAAC 57.561 39.130 16.19 0.00 37.36 2.93
2376 2904 5.359576 ACAAATGAGCTCTTGGTTACACAAA 59.640 36.000 16.19 0.00 0.00 2.83
2377 2905 4.887071 ACAAATGAGCTCTTGGTTACACAA 59.113 37.500 16.19 0.00 0.00 3.33
2378 2906 4.275689 CACAAATGAGCTCTTGGTTACACA 59.724 41.667 16.19 0.00 0.00 3.72
2379 2907 4.320494 CCACAAATGAGCTCTTGGTTACAC 60.320 45.833 16.19 0.00 0.00 2.90
2380 2908 3.820467 CCACAAATGAGCTCTTGGTTACA 59.180 43.478 16.19 0.00 0.00 2.41
2381 2909 3.191371 CCCACAAATGAGCTCTTGGTTAC 59.809 47.826 16.19 0.00 0.00 2.50
2382 2910 3.181434 ACCCACAAATGAGCTCTTGGTTA 60.181 43.478 16.19 0.00 0.00 2.85
2383 2911 2.242043 CCCACAAATGAGCTCTTGGTT 58.758 47.619 16.19 1.99 0.00 3.67
2384 2912 1.145738 ACCCACAAATGAGCTCTTGGT 59.854 47.619 16.19 8.85 0.00 3.67
2385 2913 1.815003 GACCCACAAATGAGCTCTTGG 59.185 52.381 16.19 12.53 0.00 3.61
2386 2914 2.787994 AGACCCACAAATGAGCTCTTG 58.212 47.619 16.19 14.23 0.00 3.02
2387 2915 3.584848 ACTAGACCCACAAATGAGCTCTT 59.415 43.478 16.19 5.66 0.00 2.85
2388 2916 3.177228 ACTAGACCCACAAATGAGCTCT 58.823 45.455 16.19 0.00 0.00 4.09
2389 2917 3.618690 ACTAGACCCACAAATGAGCTC 57.381 47.619 6.82 6.82 0.00 4.09
2390 2918 4.777896 TCTTACTAGACCCACAAATGAGCT 59.222 41.667 0.00 0.00 0.00 4.09
2391 2919 5.086104 TCTTACTAGACCCACAAATGAGC 57.914 43.478 0.00 0.00 0.00 4.26
2392 2920 8.567285 AAAATCTTACTAGACCCACAAATGAG 57.433 34.615 0.00 0.00 31.99 2.90
2393 2921 9.444600 GTAAAATCTTACTAGACCCACAAATGA 57.555 33.333 0.00 0.00 35.48 2.57
2394 2922 9.449719 AGTAAAATCTTACTAGACCCACAAATG 57.550 33.333 0.00 0.00 44.85 2.32
2395 2923 9.449719 CAGTAAAATCTTACTAGACCCACAAAT 57.550 33.333 0.00 0.00 44.89 2.32
2396 2924 8.434392 ACAGTAAAATCTTACTAGACCCACAAA 58.566 33.333 0.00 0.00 44.89 2.83
2397 2925 7.970102 ACAGTAAAATCTTACTAGACCCACAA 58.030 34.615 0.00 0.00 44.89 3.33
2398 2926 7.549147 ACAGTAAAATCTTACTAGACCCACA 57.451 36.000 0.00 0.00 44.89 4.17
2399 2927 7.876582 ACAACAGTAAAATCTTACTAGACCCAC 59.123 37.037 0.00 0.00 44.89 4.61
2400 2928 7.876068 CACAACAGTAAAATCTTACTAGACCCA 59.124 37.037 0.00 0.00 44.89 4.51
2401 2929 7.876582 ACACAACAGTAAAATCTTACTAGACCC 59.123 37.037 0.00 0.00 44.89 4.46
2402 2930 8.709646 CACACAACAGTAAAATCTTACTAGACC 58.290 37.037 0.00 0.00 44.89 3.85
2403 2931 9.472361 TCACACAACAGTAAAATCTTACTAGAC 57.528 33.333 0.00 0.00 44.89 2.59
2434 2962 8.981647 GCACAACATTAAGTCAAAATCATCTTT 58.018 29.630 0.00 0.00 0.00 2.52
2435 2963 7.599998 GGCACAACATTAAGTCAAAATCATCTT 59.400 33.333 0.00 0.00 0.00 2.40
2436 2964 7.092716 GGCACAACATTAAGTCAAAATCATCT 58.907 34.615 0.00 0.00 0.00 2.90
2437 2965 6.311200 GGGCACAACATTAAGTCAAAATCATC 59.689 38.462 0.00 0.00 0.00 2.92
2438 2966 6.165577 GGGCACAACATTAAGTCAAAATCAT 58.834 36.000 0.00 0.00 0.00 2.45
2439 2967 5.069648 TGGGCACAACATTAAGTCAAAATCA 59.930 36.000 0.00 0.00 0.00 2.57
2440 2968 5.537188 TGGGCACAACATTAAGTCAAAATC 58.463 37.500 0.00 0.00 0.00 2.17
2441 2969 5.304101 TCTGGGCACAACATTAAGTCAAAAT 59.696 36.000 0.00 0.00 0.00 1.82
2442 2970 4.646945 TCTGGGCACAACATTAAGTCAAAA 59.353 37.500 0.00 0.00 0.00 2.44
2443 2971 4.211125 TCTGGGCACAACATTAAGTCAAA 58.789 39.130 0.00 0.00 0.00 2.69
2444 2972 3.826524 TCTGGGCACAACATTAAGTCAA 58.173 40.909 0.00 0.00 0.00 3.18
2445 2973 3.500448 TCTGGGCACAACATTAAGTCA 57.500 42.857 0.00 0.00 0.00 3.41
2446 2974 5.880332 TCTAATCTGGGCACAACATTAAGTC 59.120 40.000 0.00 0.00 0.00 3.01
2447 2975 5.815581 TCTAATCTGGGCACAACATTAAGT 58.184 37.500 0.00 0.00 0.00 2.24
2448 2976 6.404734 GGTTCTAATCTGGGCACAACATTAAG 60.405 42.308 0.00 0.00 0.00 1.85
2449 2977 5.417580 GGTTCTAATCTGGGCACAACATTAA 59.582 40.000 0.00 0.00 0.00 1.40
2450 2978 4.947388 GGTTCTAATCTGGGCACAACATTA 59.053 41.667 0.00 0.00 0.00 1.90
2451 2979 3.763897 GGTTCTAATCTGGGCACAACATT 59.236 43.478 0.00 0.00 0.00 2.71
2452 2980 3.245229 TGGTTCTAATCTGGGCACAACAT 60.245 43.478 0.00 0.00 0.00 2.71
2453 2981 2.107378 TGGTTCTAATCTGGGCACAACA 59.893 45.455 0.00 0.00 0.00 3.33
2454 2982 2.790433 TGGTTCTAATCTGGGCACAAC 58.210 47.619 0.00 0.00 0.00 3.32
2455 2983 3.245229 ACATGGTTCTAATCTGGGCACAA 60.245 43.478 0.00 0.00 0.00 3.33
2456 2984 2.308570 ACATGGTTCTAATCTGGGCACA 59.691 45.455 0.00 0.00 0.00 4.57
2457 2985 3.004752 ACATGGTTCTAATCTGGGCAC 57.995 47.619 0.00 0.00 0.00 5.01
2458 2986 4.853468 TTACATGGTTCTAATCTGGGCA 57.147 40.909 0.00 0.00 0.00 5.36
2459 2987 6.076981 CAATTACATGGTTCTAATCTGGGC 57.923 41.667 0.00 0.00 0.00 5.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.