Multiple sequence alignment - TraesCS1B01G449300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G449300 chr1B 100.000 2370 0 0 1 2370 667998245 667995876 0.000000e+00 4377.0
1 TraesCS1B01G449300 chr1B 92.292 1479 61 24 395 1864 668031689 668030255 0.000000e+00 2050.0
2 TraesCS1B01G449300 chr1B 92.941 935 48 8 852 1784 667975901 667974983 0.000000e+00 1345.0
3 TraesCS1B01G449300 chr1B 89.863 878 41 15 984 1859 667930915 667931746 0.000000e+00 1085.0
4 TraesCS1B01G449300 chr1B 91.969 386 18 7 1997 2370 667932022 667932406 1.610000e-146 529.0
5 TraesCS1B01G449300 chr1B 90.601 383 30 2 1991 2370 667974936 667974557 9.780000e-139 503.0
6 TraesCS1B01G449300 chr1B 90.909 374 30 2 2001 2370 668029994 668029621 1.260000e-137 499.0
7 TraesCS1B01G449300 chr1B 85.564 381 32 9 602 965 667930469 667930843 6.180000e-101 377.0
8 TraesCS1B01G449300 chr1B 83.740 369 40 5 395 745 667976545 667976179 4.880000e-87 331.0
9 TraesCS1B01G449300 chr1B 86.000 250 29 2 1022 1271 667918575 667918332 1.810000e-66 263.0
10 TraesCS1B01G449300 chr1B 90.625 160 15 0 395 554 667930307 667930466 1.850000e-51 213.0
11 TraesCS1B01G449300 chr1B 98.361 61 1 0 1801 1861 667974998 667974938 8.960000e-20 108.0
12 TraesCS1B01G449300 chr1D 94.098 881 28 9 984 1864 479759408 479758552 0.000000e+00 1317.0
13 TraesCS1B01G449300 chr1D 87.060 881 58 19 987 1864 479750840 479750013 0.000000e+00 944.0
14 TraesCS1B01G449300 chr1D 94.898 392 19 1 4 394 17705926 17705535 1.560000e-171 612.0
15 TraesCS1B01G449300 chr1D 94.643 392 20 1 4 394 17729342 17728951 7.240000e-170 606.0
16 TraesCS1B01G449300 chr1D 83.710 620 65 13 395 984 479760073 479759460 9.570000e-154 553.0
17 TraesCS1B01G449300 chr1D 92.727 385 23 2 1991 2370 479750012 479749628 3.440000e-153 551.0
18 TraesCS1B01G449300 chr1D 90.601 383 31 2 1991 2370 479758549 479758169 9.780000e-139 503.0
19 TraesCS1B01G449300 chr1D 82.343 606 64 29 395 977 479751489 479750904 9.850000e-134 486.0
20 TraesCS1B01G449300 chr1D 91.892 148 12 0 2065 2212 479722323 479722176 8.590000e-50 207.0
21 TraesCS1B01G449300 chr1D 93.893 131 8 0 2240 2370 479722102 479721972 5.170000e-47 198.0
22 TraesCS1B01G449300 chr1D 77.731 238 19 13 1552 1784 479737354 479737146 5.350000e-22 115.0
23 TraesCS1B01G449300 chr1D 92.857 42 3 0 2197 2238 479722161 479722120 7.070000e-06 62.1
24 TraesCS1B01G449300 chr1A 90.932 805 32 16 984 1783 576203560 576202792 0.000000e+00 1044.0
25 TraesCS1B01G449300 chr1A 91.489 705 36 12 984 1683 576139178 576138493 0.000000e+00 948.0
26 TraesCS1B01G449300 chr1A 85.393 623 53 21 396 984 576204232 576203614 1.560000e-171 612.0
27 TraesCS1B01G449300 chr1A 84.715 615 51 14 400 984 576139833 576139232 2.040000e-160 575.0
28 TraesCS1B01G449300 chr1A 91.406 384 27 3 1991 2370 576138384 576138003 2.700000e-144 521.0
29 TraesCS1B01G449300 chr1A 89.610 385 34 3 1991 2370 576202742 576202359 3.540000e-133 484.0
30 TraesCS1B01G449300 chr1A 84.252 254 34 2 1018 1271 576065874 576065627 2.350000e-60 243.0
31 TraesCS1B01G449300 chr1A 98.438 64 1 0 1801 1864 576138448 576138385 1.930000e-21 113.0
32 TraesCS1B01G449300 chr1A 77.311 238 20 13 1552 1784 576077757 576077549 2.490000e-20 110.0
33 TraesCS1B01G449300 chrUn 95.913 367 15 0 28 394 342131480 342131846 1.570000e-166 595.0
34 TraesCS1B01G449300 chr4D 93.401 394 24 2 1 394 301536338 301536729 1.220000e-162 582.0
35 TraesCS1B01G449300 chr5B 92.839 391 28 0 4 394 508773839 508773449 3.420000e-158 568.0
36 TraesCS1B01G449300 chr5B 95.588 136 5 1 1862 1996 640272740 640272875 1.430000e-52 217.0
37 TraesCS1B01G449300 chr5B 92.053 151 10 2 1862 2011 243746943 243746794 6.640000e-51 211.0
38 TraesCS1B01G449300 chr7D 93.023 387 26 1 8 394 20477197 20476812 4.420000e-157 564.0
39 TraesCS1B01G449300 chr7D 95.556 135 6 0 1862 1996 266214381 266214247 1.430000e-52 217.0
40 TraesCS1B01G449300 chr7B 92.092 392 30 1 4 394 599876470 599876861 3.440000e-153 551.0
41 TraesCS1B01G449300 chr6D 91.837 392 31 1 4 394 471505375 471505766 1.600000e-151 545.0
42 TraesCS1B01G449300 chr4B 91.646 395 32 1 1 394 498933521 498933915 1.600000e-151 545.0
43 TraesCS1B01G449300 chr4B 94.286 140 7 1 1863 2001 626638173 626638034 1.850000e-51 213.0
44 TraesCS1B01G449300 chr7A 95.105 143 7 0 1853 1995 343843704 343843846 2.370000e-55 226.0
45 TraesCS1B01G449300 chr4A 94.964 139 6 1 1854 1992 729151976 729151839 1.430000e-52 217.0
46 TraesCS1B01G449300 chr6B 94.928 138 6 1 1854 1990 67527378 67527515 5.130000e-52 215.0
47 TraesCS1B01G449300 chr6A 94.286 140 7 1 1858 1997 594435660 594435522 1.850000e-51 213.0
48 TraesCS1B01G449300 chr5D 93.103 145 9 1 1852 1996 447459580 447459723 6.640000e-51 211.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G449300 chr1B 667995876 667998245 2369 True 4377.000000 4377 100.000000 1 2370 1 chr1B.!!$R2 2369
1 TraesCS1B01G449300 chr1B 668029621 668031689 2068 True 1274.500000 2050 91.600500 395 2370 2 chr1B.!!$R4 1975
2 TraesCS1B01G449300 chr1B 667974557 667976545 1988 True 571.750000 1345 91.410750 395 2370 4 chr1B.!!$R3 1975
3 TraesCS1B01G449300 chr1B 667930307 667932406 2099 False 551.000000 1085 89.505250 395 2370 4 chr1B.!!$F1 1975
4 TraesCS1B01G449300 chr1D 479758169 479760073 1904 True 791.000000 1317 89.469667 395 2370 3 chr1D.!!$R6 1975
5 TraesCS1B01G449300 chr1D 479749628 479751489 1861 True 660.333333 944 87.376667 395 2370 3 chr1D.!!$R5 1975
6 TraesCS1B01G449300 chr1A 576202359 576204232 1873 True 713.333333 1044 88.645000 396 2370 3 chr1A.!!$R4 1974
7 TraesCS1B01G449300 chr1A 576138003 576139833 1830 True 539.250000 948 91.512000 400 2370 4 chr1A.!!$R3 1970

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
357 358 0.033503 TCCCATCTAGCCACGTCTCA 60.034 55.0 0.0 0.0 0.0 3.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1971 2514 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.0 0.0 0.0 0.0 3.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.873242 AATAAAAAGCACGAAAACAAAAACAG 57.127 26.923 0.00 0.00 0.00 3.16
26 27 4.919677 AAAGCACGAAAACAAAAACAGG 57.080 36.364 0.00 0.00 0.00 4.00
27 28 3.859411 AGCACGAAAACAAAAACAGGA 57.141 38.095 0.00 0.00 0.00 3.86
28 29 3.507786 AGCACGAAAACAAAAACAGGAC 58.492 40.909 0.00 0.00 0.00 3.85
29 30 3.057174 AGCACGAAAACAAAAACAGGACA 60.057 39.130 0.00 0.00 0.00 4.02
30 31 3.303229 GCACGAAAACAAAAACAGGACAG 59.697 43.478 0.00 0.00 0.00 3.51
31 32 3.303229 CACGAAAACAAAAACAGGACAGC 59.697 43.478 0.00 0.00 0.00 4.40
32 33 2.857748 CGAAAACAAAAACAGGACAGCC 59.142 45.455 0.00 0.00 0.00 4.85
33 34 3.674682 CGAAAACAAAAACAGGACAGCCA 60.675 43.478 0.00 0.00 36.29 4.75
34 35 2.959507 AACAAAAACAGGACAGCCAC 57.040 45.000 0.00 0.00 36.29 5.01
35 36 1.846007 ACAAAAACAGGACAGCCACA 58.154 45.000 0.00 0.00 36.29 4.17
36 37 2.175202 ACAAAAACAGGACAGCCACAA 58.825 42.857 0.00 0.00 36.29 3.33
37 38 2.094234 ACAAAAACAGGACAGCCACAAC 60.094 45.455 0.00 0.00 36.29 3.32
38 39 1.111277 AAAACAGGACAGCCACAACC 58.889 50.000 0.00 0.00 36.29 3.77
39 40 0.033601 AAACAGGACAGCCACAACCA 60.034 50.000 0.00 0.00 36.29 3.67
40 41 0.466189 AACAGGACAGCCACAACCAG 60.466 55.000 0.00 0.00 36.29 4.00
41 42 2.113986 AGGACAGCCACAACCAGC 59.886 61.111 0.00 0.00 36.29 4.85
42 43 2.203337 GGACAGCCACAACCAGCA 60.203 61.111 0.00 0.00 0.00 4.41
43 44 2.263741 GGACAGCCACAACCAGCAG 61.264 63.158 0.00 0.00 0.00 4.24
44 45 2.203394 ACAGCCACAACCAGCAGG 60.203 61.111 0.00 0.00 42.21 4.85
47 48 3.225798 GCCACAACCAGCAGGCAA 61.226 61.111 0.00 0.00 46.26 4.52
48 49 2.795110 GCCACAACCAGCAGGCAAA 61.795 57.895 0.00 0.00 46.26 3.68
49 50 1.821936 CCACAACCAGCAGGCAAAA 59.178 52.632 0.00 0.00 39.06 2.44
50 51 0.177604 CCACAACCAGCAGGCAAAAA 59.822 50.000 0.00 0.00 39.06 1.94
76 77 9.668497 AACAGATAGAAAACTAAACACCTATCC 57.332 33.333 0.00 0.00 35.40 2.59
77 78 9.047947 ACAGATAGAAAACTAAACACCTATCCT 57.952 33.333 0.00 0.00 35.40 3.24
88 89 8.648693 ACTAAACACCTATCCTATTACATGACC 58.351 37.037 0.00 0.00 0.00 4.02
89 90 5.723672 ACACCTATCCTATTACATGACCG 57.276 43.478 0.00 0.00 0.00 4.79
90 91 4.021368 ACACCTATCCTATTACATGACCGC 60.021 45.833 0.00 0.00 0.00 5.68
91 92 3.514309 ACCTATCCTATTACATGACCGCC 59.486 47.826 0.00 0.00 0.00 6.13
92 93 3.513912 CCTATCCTATTACATGACCGCCA 59.486 47.826 0.00 0.00 0.00 5.69
93 94 4.162320 CCTATCCTATTACATGACCGCCAT 59.838 45.833 0.00 0.00 35.44 4.40
94 95 3.678056 TCCTATTACATGACCGCCATC 57.322 47.619 0.00 0.00 31.94 3.51
95 96 2.301870 TCCTATTACATGACCGCCATCC 59.698 50.000 0.00 0.00 31.94 3.51
96 97 2.337583 CTATTACATGACCGCCATCCG 58.662 52.381 0.00 0.00 31.94 4.18
97 98 0.756294 ATTACATGACCGCCATCCGA 59.244 50.000 0.00 0.00 40.02 4.55
98 99 0.537653 TTACATGACCGCCATCCGAA 59.462 50.000 0.00 0.00 40.02 4.30
99 100 0.179094 TACATGACCGCCATCCGAAC 60.179 55.000 0.00 0.00 40.02 3.95
100 101 2.180204 CATGACCGCCATCCGAACC 61.180 63.158 0.00 0.00 40.02 3.62
101 102 3.733344 ATGACCGCCATCCGAACCG 62.733 63.158 0.00 0.00 40.02 4.44
106 107 2.046700 GCCATCCGAACCGGTTGA 60.047 61.111 27.87 17.58 46.01 3.18
107 108 1.673009 GCCATCCGAACCGGTTGAA 60.673 57.895 27.87 10.11 46.01 2.69
108 109 1.644786 GCCATCCGAACCGGTTGAAG 61.645 60.000 27.87 13.54 46.01 3.02
109 110 0.036765 CCATCCGAACCGGTTGAAGA 60.037 55.000 27.87 18.20 46.01 2.87
110 111 1.406887 CCATCCGAACCGGTTGAAGAT 60.407 52.381 27.87 19.64 46.01 2.40
111 112 2.159014 CCATCCGAACCGGTTGAAGATA 60.159 50.000 27.87 7.88 46.01 1.98
112 113 3.123804 CATCCGAACCGGTTGAAGATAG 58.876 50.000 27.87 13.29 46.01 2.08
113 114 1.287425 CCGAACCGGTTGAAGATAGC 58.713 55.000 27.87 6.43 42.73 2.97
114 115 1.287425 CGAACCGGTTGAAGATAGCC 58.713 55.000 27.87 5.62 0.00 3.93
115 116 1.664873 GAACCGGTTGAAGATAGCCC 58.335 55.000 27.87 1.48 0.00 5.19
116 117 0.107848 AACCGGTTGAAGATAGCCCG 60.108 55.000 21.56 0.00 38.39 6.13
117 118 1.262640 ACCGGTTGAAGATAGCCCGT 61.263 55.000 0.00 0.00 36.98 5.28
118 119 0.810031 CCGGTTGAAGATAGCCCGTG 60.810 60.000 0.00 0.00 36.98 4.94
119 120 1.429148 CGGTTGAAGATAGCCCGTGC 61.429 60.000 0.00 0.00 34.10 5.34
129 130 4.509737 GCCCGTGCTACCGTCTCC 62.510 72.222 0.00 0.00 33.53 3.71
130 131 3.834799 CCCGTGCTACCGTCTCCC 61.835 72.222 0.00 0.00 0.00 4.30
131 132 3.066190 CCGTGCTACCGTCTCCCA 61.066 66.667 0.00 0.00 0.00 4.37
132 133 2.423898 CCGTGCTACCGTCTCCCAT 61.424 63.158 0.00 0.00 0.00 4.00
133 134 1.065928 CGTGCTACCGTCTCCCATC 59.934 63.158 0.00 0.00 0.00 3.51
134 135 1.065928 GTGCTACCGTCTCCCATCG 59.934 63.158 0.00 0.00 0.00 3.84
144 145 3.344515 CGTCTCCCATCGGATAGATACA 58.655 50.000 0.00 0.00 37.60 2.29
145 146 3.375610 CGTCTCCCATCGGATAGATACAG 59.624 52.174 0.00 0.00 37.60 2.74
146 147 4.337145 GTCTCCCATCGGATAGATACAGT 58.663 47.826 0.00 0.00 37.60 3.55
147 148 5.498393 GTCTCCCATCGGATAGATACAGTA 58.502 45.833 0.00 0.00 37.60 2.74
148 149 5.944599 GTCTCCCATCGGATAGATACAGTAA 59.055 44.000 0.00 0.00 37.60 2.24
149 150 5.944599 TCTCCCATCGGATAGATACAGTAAC 59.055 44.000 0.00 0.00 37.60 2.50
150 151 5.014858 TCCCATCGGATAGATACAGTAACC 58.985 45.833 0.00 0.00 37.52 2.85
151 152 4.770531 CCCATCGGATAGATACAGTAACCA 59.229 45.833 0.00 0.00 37.52 3.67
152 153 5.245301 CCCATCGGATAGATACAGTAACCAA 59.755 44.000 0.00 0.00 37.52 3.67
153 154 6.239487 CCCATCGGATAGATACAGTAACCAAA 60.239 42.308 0.00 0.00 37.52 3.28
154 155 7.386851 CCATCGGATAGATACAGTAACCAAAT 58.613 38.462 0.00 0.00 37.52 2.32
155 156 7.331934 CCATCGGATAGATACAGTAACCAAATG 59.668 40.741 0.00 0.00 37.52 2.32
156 157 6.220930 TCGGATAGATACAGTAACCAAATGC 58.779 40.000 0.00 0.00 0.00 3.56
157 158 6.041637 TCGGATAGATACAGTAACCAAATGCT 59.958 38.462 0.00 0.00 0.00 3.79
158 159 6.366332 CGGATAGATACAGTAACCAAATGCTC 59.634 42.308 0.00 0.00 0.00 4.26
159 160 6.651225 GGATAGATACAGTAACCAAATGCTCC 59.349 42.308 0.00 0.00 0.00 4.70
160 161 4.781934 AGATACAGTAACCAAATGCTCCC 58.218 43.478 0.00 0.00 0.00 4.30
161 162 4.475016 AGATACAGTAACCAAATGCTCCCT 59.525 41.667 0.00 0.00 0.00 4.20
162 163 2.795329 ACAGTAACCAAATGCTCCCTG 58.205 47.619 0.00 0.00 0.00 4.45
163 164 2.094675 CAGTAACCAAATGCTCCCTGG 58.905 52.381 0.00 0.00 36.24 4.45
164 165 1.710809 AGTAACCAAATGCTCCCTGGT 59.289 47.619 0.00 0.00 45.50 4.00
165 166 2.092323 GTAACCAAATGCTCCCTGGTC 58.908 52.381 0.00 0.00 42.72 4.02
166 167 0.779997 AACCAAATGCTCCCTGGTCT 59.220 50.000 0.00 0.00 42.72 3.85
167 168 0.329596 ACCAAATGCTCCCTGGTCTC 59.670 55.000 0.00 0.00 39.27 3.36
168 169 0.394899 CCAAATGCTCCCTGGTCTCC 60.395 60.000 0.00 0.00 0.00 3.71
169 170 0.745845 CAAATGCTCCCTGGTCTCCG 60.746 60.000 0.00 0.00 0.00 4.63
170 171 1.201429 AAATGCTCCCTGGTCTCCGT 61.201 55.000 0.00 0.00 0.00 4.69
171 172 1.201429 AATGCTCCCTGGTCTCCGTT 61.201 55.000 0.00 0.00 0.00 4.44
172 173 1.903877 ATGCTCCCTGGTCTCCGTTG 61.904 60.000 0.00 0.00 0.00 4.10
173 174 2.982130 CTCCCTGGTCTCCGTTGG 59.018 66.667 0.00 0.00 0.00 3.77
174 175 1.609501 CTCCCTGGTCTCCGTTGGA 60.610 63.158 0.00 0.00 0.00 3.53
183 184 3.723554 CTCCGTTGGAGTGAGTAGC 57.276 57.895 4.65 0.00 44.25 3.58
184 185 0.179161 CTCCGTTGGAGTGAGTAGCG 60.179 60.000 4.65 0.00 44.25 4.26
185 186 0.607217 TCCGTTGGAGTGAGTAGCGA 60.607 55.000 0.00 0.00 0.00 4.93
186 187 0.456221 CCGTTGGAGTGAGTAGCGAT 59.544 55.000 0.00 0.00 0.00 4.58
187 188 1.674441 CCGTTGGAGTGAGTAGCGATA 59.326 52.381 0.00 0.00 0.00 2.92
188 189 2.098607 CCGTTGGAGTGAGTAGCGATAA 59.901 50.000 0.00 0.00 0.00 1.75
189 190 3.106672 CGTTGGAGTGAGTAGCGATAAC 58.893 50.000 0.00 0.00 0.00 1.89
190 191 3.427098 CGTTGGAGTGAGTAGCGATAACA 60.427 47.826 0.00 0.00 0.00 2.41
191 192 4.683832 GTTGGAGTGAGTAGCGATAACAT 58.316 43.478 0.00 0.00 0.00 2.71
192 193 5.505159 CGTTGGAGTGAGTAGCGATAACATA 60.505 44.000 0.00 0.00 0.00 2.29
193 194 5.434352 TGGAGTGAGTAGCGATAACATAC 57.566 43.478 0.00 0.00 0.00 2.39
194 195 4.024302 TGGAGTGAGTAGCGATAACATACG 60.024 45.833 0.00 0.00 0.00 3.06
195 196 4.465016 GAGTGAGTAGCGATAACATACGG 58.535 47.826 0.00 0.00 0.00 4.02
196 197 4.132336 AGTGAGTAGCGATAACATACGGA 58.868 43.478 0.00 0.00 0.00 4.69
197 198 4.760715 AGTGAGTAGCGATAACATACGGAT 59.239 41.667 0.00 0.00 0.00 4.18
198 199 4.852104 GTGAGTAGCGATAACATACGGATG 59.148 45.833 5.94 5.94 39.16 3.51
199 200 4.758165 TGAGTAGCGATAACATACGGATGA 59.242 41.667 16.36 0.00 36.48 2.92
200 201 5.106673 TGAGTAGCGATAACATACGGATGAG 60.107 44.000 16.36 1.21 36.48 2.90
201 202 4.760715 AGTAGCGATAACATACGGATGAGT 59.239 41.667 16.36 4.10 36.48 3.41
202 203 3.902150 AGCGATAACATACGGATGAGTG 58.098 45.455 16.36 0.20 36.48 3.51
203 204 3.318275 AGCGATAACATACGGATGAGTGT 59.682 43.478 16.36 0.00 36.48 3.55
204 205 4.517832 AGCGATAACATACGGATGAGTGTA 59.482 41.667 16.36 1.16 36.48 2.90
205 206 4.852104 GCGATAACATACGGATGAGTGTAG 59.148 45.833 16.36 1.87 36.48 2.74
206 207 5.562307 GCGATAACATACGGATGAGTGTAGT 60.562 44.000 16.36 0.00 36.48 2.73
207 208 5.851703 CGATAACATACGGATGAGTGTAGTG 59.148 44.000 16.36 0.00 36.48 2.74
208 209 4.386867 AACATACGGATGAGTGTAGTGG 57.613 45.455 16.36 0.00 36.48 4.00
209 210 2.100916 ACATACGGATGAGTGTAGTGGC 59.899 50.000 16.36 0.00 36.48 5.01
210 211 1.108776 TACGGATGAGTGTAGTGGCC 58.891 55.000 0.00 0.00 0.00 5.36
211 212 1.144057 CGGATGAGTGTAGTGGCCC 59.856 63.158 0.00 0.00 0.00 5.80
212 213 1.330655 CGGATGAGTGTAGTGGCCCT 61.331 60.000 0.00 0.00 0.00 5.19
213 214 0.179000 GGATGAGTGTAGTGGCCCTG 59.821 60.000 0.00 0.00 0.00 4.45
214 215 1.195115 GATGAGTGTAGTGGCCCTGA 58.805 55.000 0.00 0.00 0.00 3.86
215 216 1.555075 GATGAGTGTAGTGGCCCTGAA 59.445 52.381 0.00 0.00 0.00 3.02
216 217 0.976641 TGAGTGTAGTGGCCCTGAAG 59.023 55.000 0.00 0.00 0.00 3.02
217 218 1.267121 GAGTGTAGTGGCCCTGAAGA 58.733 55.000 0.00 0.00 0.00 2.87
218 219 0.977395 AGTGTAGTGGCCCTGAAGAC 59.023 55.000 0.00 0.00 0.00 3.01
219 220 0.685097 GTGTAGTGGCCCTGAAGACA 59.315 55.000 0.00 0.00 0.00 3.41
220 221 1.071699 GTGTAGTGGCCCTGAAGACAA 59.928 52.381 0.00 0.00 0.00 3.18
221 222 1.071699 TGTAGTGGCCCTGAAGACAAC 59.928 52.381 0.00 0.00 0.00 3.32
222 223 0.690762 TAGTGGCCCTGAAGACAACC 59.309 55.000 0.00 0.00 0.00 3.77
223 224 1.062488 AGTGGCCCTGAAGACAACCT 61.062 55.000 0.00 0.00 0.00 3.50
224 225 0.890996 GTGGCCCTGAAGACAACCTG 60.891 60.000 0.00 0.00 0.00 4.00
225 226 1.973812 GGCCCTGAAGACAACCTGC 60.974 63.158 0.00 0.00 0.00 4.85
226 227 1.228245 GCCCTGAAGACAACCTGCA 60.228 57.895 0.00 0.00 0.00 4.41
227 228 0.823356 GCCCTGAAGACAACCTGCAA 60.823 55.000 0.00 0.00 27.65 4.08
228 229 1.242076 CCCTGAAGACAACCTGCAAG 58.758 55.000 0.00 0.00 27.65 4.01
229 230 1.202806 CCCTGAAGACAACCTGCAAGA 60.203 52.381 0.00 0.00 34.07 3.02
230 231 2.575532 CCTGAAGACAACCTGCAAGAA 58.424 47.619 0.00 0.00 34.07 2.52
231 232 2.951642 CCTGAAGACAACCTGCAAGAAA 59.048 45.455 0.00 0.00 34.07 2.52
232 233 3.571401 CCTGAAGACAACCTGCAAGAAAT 59.429 43.478 0.00 0.00 34.07 2.17
233 234 4.543692 CTGAAGACAACCTGCAAGAAATG 58.456 43.478 0.00 0.00 34.07 2.32
234 235 4.206375 TGAAGACAACCTGCAAGAAATGA 58.794 39.130 0.00 0.00 34.07 2.57
235 236 4.644234 TGAAGACAACCTGCAAGAAATGAA 59.356 37.500 0.00 0.00 34.07 2.57
236 237 5.302568 TGAAGACAACCTGCAAGAAATGAAT 59.697 36.000 0.00 0.00 34.07 2.57
237 238 6.489700 TGAAGACAACCTGCAAGAAATGAATA 59.510 34.615 0.00 0.00 34.07 1.75
238 239 7.177216 TGAAGACAACCTGCAAGAAATGAATAT 59.823 33.333 0.00 0.00 34.07 1.28
239 240 7.472334 AGACAACCTGCAAGAAATGAATATT 57.528 32.000 0.00 0.00 34.07 1.28
240 241 7.899973 AGACAACCTGCAAGAAATGAATATTT 58.100 30.769 0.00 0.00 39.16 1.40
241 242 7.816031 AGACAACCTGCAAGAAATGAATATTTG 59.184 33.333 0.00 0.00 36.66 2.32
242 243 7.444299 ACAACCTGCAAGAAATGAATATTTGT 58.556 30.769 0.00 0.00 36.66 2.83
243 244 7.933033 ACAACCTGCAAGAAATGAATATTTGTT 59.067 29.630 0.00 0.00 39.52 2.83
264 265 7.513190 TGTTGTTCTGTTAAAAACCAAATCG 57.487 32.000 0.00 0.00 0.00 3.34
265 266 6.035112 TGTTGTTCTGTTAAAAACCAAATCGC 59.965 34.615 0.00 0.00 0.00 4.58
266 267 5.897050 TGTTCTGTTAAAAACCAAATCGCT 58.103 33.333 0.00 0.00 0.00 4.93
267 268 6.334202 TGTTCTGTTAAAAACCAAATCGCTT 58.666 32.000 0.00 0.00 0.00 4.68
268 269 6.474102 TGTTCTGTTAAAAACCAAATCGCTTC 59.526 34.615 0.00 0.00 0.00 3.86
269 270 6.385649 TCTGTTAAAAACCAAATCGCTTCT 57.614 33.333 0.00 0.00 0.00 2.85
270 271 6.205784 TCTGTTAAAAACCAAATCGCTTCTG 58.794 36.000 0.00 0.00 0.00 3.02
271 272 5.897050 TGTTAAAAACCAAATCGCTTCTGT 58.103 33.333 0.00 0.00 0.00 3.41
272 273 7.012515 TCTGTTAAAAACCAAATCGCTTCTGTA 59.987 33.333 0.00 0.00 0.00 2.74
273 274 7.136119 TGTTAAAAACCAAATCGCTTCTGTAG 58.864 34.615 0.00 0.00 0.00 2.74
274 275 5.767816 AAAAACCAAATCGCTTCTGTAGT 57.232 34.783 0.00 0.00 0.00 2.73
275 276 5.767816 AAAACCAAATCGCTTCTGTAGTT 57.232 34.783 0.00 0.00 0.00 2.24
276 277 5.358298 AAACCAAATCGCTTCTGTAGTTC 57.642 39.130 0.00 0.00 0.00 3.01
277 278 3.335579 ACCAAATCGCTTCTGTAGTTCC 58.664 45.455 0.00 0.00 0.00 3.62
278 279 3.244422 ACCAAATCGCTTCTGTAGTTCCA 60.244 43.478 0.00 0.00 0.00 3.53
279 280 3.751175 CCAAATCGCTTCTGTAGTTCCAA 59.249 43.478 0.00 0.00 0.00 3.53
280 281 4.215399 CCAAATCGCTTCTGTAGTTCCAAA 59.785 41.667 0.00 0.00 0.00 3.28
281 282 5.106157 CCAAATCGCTTCTGTAGTTCCAAAT 60.106 40.000 0.00 0.00 0.00 2.32
282 283 6.381801 CAAATCGCTTCTGTAGTTCCAAATT 58.618 36.000 0.00 0.00 0.00 1.82
283 284 5.551760 ATCGCTTCTGTAGTTCCAAATTG 57.448 39.130 0.00 0.00 0.00 2.32
284 285 3.188460 TCGCTTCTGTAGTTCCAAATTGC 59.812 43.478 0.00 0.00 0.00 3.56
285 286 3.670627 CGCTTCTGTAGTTCCAAATTGCC 60.671 47.826 0.00 0.00 0.00 4.52
286 287 3.367395 GCTTCTGTAGTTCCAAATTGCCC 60.367 47.826 0.00 0.00 0.00 5.36
287 288 3.517296 TCTGTAGTTCCAAATTGCCCA 57.483 42.857 0.00 0.00 0.00 5.36
288 289 4.046286 TCTGTAGTTCCAAATTGCCCAT 57.954 40.909 0.00 0.00 0.00 4.00
289 290 5.186256 TCTGTAGTTCCAAATTGCCCATA 57.814 39.130 0.00 0.00 0.00 2.74
290 291 5.192927 TCTGTAGTTCCAAATTGCCCATAG 58.807 41.667 0.00 0.00 0.00 2.23
291 292 4.929479 TGTAGTTCCAAATTGCCCATAGT 58.071 39.130 0.00 0.00 0.00 2.12
292 293 6.068461 TGTAGTTCCAAATTGCCCATAGTA 57.932 37.500 0.00 0.00 0.00 1.82
293 294 6.486056 TGTAGTTCCAAATTGCCCATAGTAA 58.514 36.000 0.00 0.00 0.00 2.24
294 295 6.948886 TGTAGTTCCAAATTGCCCATAGTAAA 59.051 34.615 0.00 0.00 0.00 2.01
295 296 6.926630 AGTTCCAAATTGCCCATAGTAAAA 57.073 33.333 0.00 0.00 0.00 1.52
296 297 6.697395 AGTTCCAAATTGCCCATAGTAAAAC 58.303 36.000 0.00 0.00 0.00 2.43
297 298 6.268847 AGTTCCAAATTGCCCATAGTAAAACA 59.731 34.615 0.00 0.00 0.00 2.83
298 299 6.031751 TCCAAATTGCCCATAGTAAAACAC 57.968 37.500 0.00 0.00 0.00 3.32
299 300 5.540337 TCCAAATTGCCCATAGTAAAACACA 59.460 36.000 0.00 0.00 0.00 3.72
300 301 6.212388 TCCAAATTGCCCATAGTAAAACACAT 59.788 34.615 0.00 0.00 0.00 3.21
301 302 7.397476 TCCAAATTGCCCATAGTAAAACACATA 59.603 33.333 0.00 0.00 0.00 2.29
302 303 7.491048 CCAAATTGCCCATAGTAAAACACATAC 59.509 37.037 0.00 0.00 0.00 2.39
303 304 7.954666 AATTGCCCATAGTAAAACACATACT 57.045 32.000 0.00 0.00 37.39 2.12
304 305 6.995511 TTGCCCATAGTAAAACACATACTC 57.004 37.500 0.00 0.00 35.34 2.59
305 306 5.433526 TGCCCATAGTAAAACACATACTCC 58.566 41.667 0.00 0.00 35.34 3.85
306 307 5.190925 TGCCCATAGTAAAACACATACTCCT 59.809 40.000 0.00 0.00 35.34 3.69
307 308 6.384595 TGCCCATAGTAAAACACATACTCCTA 59.615 38.462 0.00 0.00 35.34 2.94
308 309 6.704937 GCCCATAGTAAAACACATACTCCTAC 59.295 42.308 0.00 0.00 35.34 3.18
309 310 7.634210 GCCCATAGTAAAACACATACTCCTACA 60.634 40.741 0.00 0.00 35.34 2.74
310 311 7.709613 CCCATAGTAAAACACATACTCCTACAC 59.290 40.741 0.00 0.00 35.34 2.90
311 312 7.434307 CCATAGTAAAACACATACTCCTACACG 59.566 40.741 0.00 0.00 35.34 4.49
312 313 5.717119 AGTAAAACACATACTCCTACACGG 58.283 41.667 0.00 0.00 0.00 4.94
313 314 4.877378 AAAACACATACTCCTACACGGA 57.123 40.909 0.00 0.00 40.30 4.69
314 315 5.416271 AAAACACATACTCCTACACGGAT 57.584 39.130 0.00 0.00 42.12 4.18
315 316 6.534475 AAAACACATACTCCTACACGGATA 57.466 37.500 0.00 0.00 42.12 2.59
316 317 6.726490 AAACACATACTCCTACACGGATAT 57.274 37.500 0.00 0.00 42.12 1.63
317 318 5.707242 ACACATACTCCTACACGGATATG 57.293 43.478 0.00 0.00 42.12 1.78
318 319 5.138276 ACACATACTCCTACACGGATATGT 58.862 41.667 0.00 0.00 41.71 2.29
319 320 5.241064 ACACATACTCCTACACGGATATGTC 59.759 44.000 10.42 0.00 40.53 3.06
320 321 5.473846 CACATACTCCTACACGGATATGTCT 59.526 44.000 10.42 0.00 40.53 3.41
321 322 5.706369 ACATACTCCTACACGGATATGTCTC 59.294 44.000 0.00 0.00 42.12 3.36
322 323 3.139850 ACTCCTACACGGATATGTCTCG 58.860 50.000 0.00 0.00 42.12 4.04
323 324 1.878088 TCCTACACGGATATGTCTCGC 59.122 52.381 0.00 0.00 36.69 5.03
324 325 1.880675 CCTACACGGATATGTCTCGCT 59.119 52.381 0.00 0.00 33.85 4.93
325 326 2.350868 CCTACACGGATATGTCTCGCTG 60.351 54.545 0.00 2.66 33.85 5.18
326 327 1.103803 ACACGGATATGTCTCGCTGT 58.896 50.000 0.00 3.12 0.00 4.40
327 328 1.476891 ACACGGATATGTCTCGCTGTT 59.523 47.619 0.00 0.00 0.00 3.16
328 329 2.686405 ACACGGATATGTCTCGCTGTTA 59.314 45.455 0.00 0.00 0.00 2.41
329 330 3.043586 CACGGATATGTCTCGCTGTTAC 58.956 50.000 0.00 0.00 0.00 2.50
330 331 2.950309 ACGGATATGTCTCGCTGTTACT 59.050 45.455 0.00 0.00 0.00 2.24
331 332 4.024302 CACGGATATGTCTCGCTGTTACTA 60.024 45.833 0.00 0.00 0.00 1.82
332 333 4.024218 ACGGATATGTCTCGCTGTTACTAC 60.024 45.833 0.00 0.00 0.00 2.73
333 334 4.465016 GGATATGTCTCGCTGTTACTACG 58.535 47.826 0.00 0.00 0.00 3.51
334 335 4.024218 GGATATGTCTCGCTGTTACTACGT 60.024 45.833 0.00 0.00 0.00 3.57
335 336 2.888513 TGTCTCGCTGTTACTACGTC 57.111 50.000 0.00 0.00 0.00 4.34
336 337 2.145536 TGTCTCGCTGTTACTACGTCA 58.854 47.619 0.00 0.00 0.00 4.35
337 338 2.549329 TGTCTCGCTGTTACTACGTCAA 59.451 45.455 0.00 0.00 0.00 3.18
338 339 3.189910 TGTCTCGCTGTTACTACGTCAAT 59.810 43.478 0.00 0.00 0.00 2.57
339 340 3.784994 GTCTCGCTGTTACTACGTCAATC 59.215 47.826 0.00 0.00 0.00 2.67
340 341 3.106672 CTCGCTGTTACTACGTCAATCC 58.893 50.000 0.00 0.00 0.00 3.01
341 342 2.159338 TCGCTGTTACTACGTCAATCCC 60.159 50.000 0.00 0.00 0.00 3.85
342 343 2.416296 CGCTGTTACTACGTCAATCCCA 60.416 50.000 0.00 0.00 0.00 4.37
343 344 3.737047 CGCTGTTACTACGTCAATCCCAT 60.737 47.826 0.00 0.00 0.00 4.00
344 345 3.802685 GCTGTTACTACGTCAATCCCATC 59.197 47.826 0.00 0.00 0.00 3.51
345 346 4.441634 GCTGTTACTACGTCAATCCCATCT 60.442 45.833 0.00 0.00 0.00 2.90
346 347 5.221185 GCTGTTACTACGTCAATCCCATCTA 60.221 44.000 0.00 0.00 0.00 1.98
347 348 6.387041 TGTTACTACGTCAATCCCATCTAG 57.613 41.667 0.00 0.00 0.00 2.43
348 349 5.221130 GTTACTACGTCAATCCCATCTAGC 58.779 45.833 0.00 0.00 0.00 3.42
349 350 2.628657 ACTACGTCAATCCCATCTAGCC 59.371 50.000 0.00 0.00 0.00 3.93
350 351 1.496060 ACGTCAATCCCATCTAGCCA 58.504 50.000 0.00 0.00 0.00 4.75
351 352 1.139058 ACGTCAATCCCATCTAGCCAC 59.861 52.381 0.00 0.00 0.00 5.01
352 353 1.869754 CGTCAATCCCATCTAGCCACG 60.870 57.143 0.00 0.00 0.00 4.94
353 354 1.139058 GTCAATCCCATCTAGCCACGT 59.861 52.381 0.00 0.00 0.00 4.49
354 355 1.412710 TCAATCCCATCTAGCCACGTC 59.587 52.381 0.00 0.00 0.00 4.34
355 356 1.414181 CAATCCCATCTAGCCACGTCT 59.586 52.381 0.00 0.00 0.00 4.18
356 357 1.333177 ATCCCATCTAGCCACGTCTC 58.667 55.000 0.00 0.00 0.00 3.36
357 358 0.033503 TCCCATCTAGCCACGTCTCA 60.034 55.000 0.00 0.00 0.00 3.27
358 359 0.824109 CCCATCTAGCCACGTCTCAA 59.176 55.000 0.00 0.00 0.00 3.02
359 360 1.207089 CCCATCTAGCCACGTCTCAAA 59.793 52.381 0.00 0.00 0.00 2.69
360 361 2.158900 CCCATCTAGCCACGTCTCAAAT 60.159 50.000 0.00 0.00 0.00 2.32
361 362 3.069586 CCCATCTAGCCACGTCTCAAATA 59.930 47.826 0.00 0.00 0.00 1.40
362 363 4.442893 CCCATCTAGCCACGTCTCAAATAA 60.443 45.833 0.00 0.00 0.00 1.40
363 364 4.508124 CCATCTAGCCACGTCTCAAATAAC 59.492 45.833 0.00 0.00 0.00 1.89
364 365 3.766151 TCTAGCCACGTCTCAAATAACG 58.234 45.455 0.00 0.00 44.22 3.18
374 375 6.397831 CGTCTCAAATAACGTGTTAATGGA 57.602 37.500 0.00 0.00 34.30 3.41
375 376 6.823531 CGTCTCAAATAACGTGTTAATGGAA 58.176 36.000 0.00 0.00 34.30 3.53
376 377 7.461107 CGTCTCAAATAACGTGTTAATGGAAT 58.539 34.615 0.00 0.00 34.30 3.01
377 378 7.960738 CGTCTCAAATAACGTGTTAATGGAATT 59.039 33.333 0.00 0.00 35.80 2.17
378 379 9.274065 GTCTCAAATAACGTGTTAATGGAATTC 57.726 33.333 0.00 0.00 37.87 2.17
379 380 8.172484 TCTCAAATAACGTGTTAATGGAATTCG 58.828 33.333 0.00 0.00 37.87 3.34
380 381 8.030744 TCAAATAACGTGTTAATGGAATTCGA 57.969 30.769 0.00 0.00 37.87 3.71
381 382 8.504815 TCAAATAACGTGTTAATGGAATTCGAA 58.495 29.630 0.00 0.00 37.87 3.71
382 383 8.785101 CAAATAACGTGTTAATGGAATTCGAAG 58.215 33.333 3.35 0.00 37.87 3.79
383 384 4.939509 ACGTGTTAATGGAATTCGAAGG 57.060 40.909 3.35 0.00 37.87 3.46
384 385 4.571919 ACGTGTTAATGGAATTCGAAGGA 58.428 39.130 3.35 0.00 37.87 3.36
385 386 4.630069 ACGTGTTAATGGAATTCGAAGGAG 59.370 41.667 3.35 0.00 37.87 3.69
386 387 4.630069 CGTGTTAATGGAATTCGAAGGAGT 59.370 41.667 3.35 0.00 37.87 3.85
387 388 5.121768 CGTGTTAATGGAATTCGAAGGAGTT 59.878 40.000 3.35 0.00 37.87 3.01
388 389 6.311935 CGTGTTAATGGAATTCGAAGGAGTTA 59.688 38.462 3.35 0.00 37.87 2.24
389 390 7.011109 CGTGTTAATGGAATTCGAAGGAGTTAT 59.989 37.037 3.35 0.00 37.87 1.89
390 391 9.321562 GTGTTAATGGAATTCGAAGGAGTTATA 57.678 33.333 3.35 0.00 37.87 0.98
438 441 9.141400 CCACAACACTAGTAGAAAGAATAGTTC 57.859 37.037 3.59 0.00 0.00 3.01
457 460 6.220726 AGTTCTTTGCTATTTTGTGGTGTT 57.779 33.333 0.00 0.00 0.00 3.32
475 478 5.350365 TGGTGTTAATAAGAGTCAACATCGC 59.650 40.000 0.00 0.00 35.27 4.58
535 538 9.914923 CTTAATTTGGTGTAACAAAAAGCTTTC 57.085 29.630 13.10 0.00 44.18 2.62
585 590 9.573166 TTTCAAAATGATAGAAGAGAAACCTCA 57.427 29.630 0.00 0.00 33.16 3.86
615 632 7.013274 GGTATCTGCATATGCCTCAACTTTAAA 59.987 37.037 24.54 0.56 41.18 1.52
689 721 6.643770 TGCATTTTCTCTTTGAATCTTTGAGC 59.356 34.615 0.00 0.00 34.24 4.26
886 1096 2.103153 TTATCATCCTCCTTCCCGCT 57.897 50.000 0.00 0.00 0.00 5.52
900 1110 1.003839 CCGCTCCCACACAAAGCTA 60.004 57.895 0.00 0.00 33.83 3.32
1005 1269 1.521457 TCGAGCGACATCAATGGCC 60.521 57.895 0.00 0.00 29.87 5.36
1158 1422 1.267261 GACGATGTCAGGCGCTACTAT 59.733 52.381 7.64 0.00 32.09 2.12
1173 1437 1.407936 ACTATGAGCTGCTCGTCCAT 58.592 50.000 26.39 15.86 32.35 3.41
1357 1621 3.144657 TGTGTGATCAGGTTGAAGCAT 57.855 42.857 0.00 0.00 0.00 3.79
1360 1624 5.069318 TGTGTGATCAGGTTGAAGCATTTA 58.931 37.500 0.00 0.00 0.00 1.40
1449 1713 0.956902 AGAAGCATGTGCGTGCATGA 60.957 50.000 20.14 0.00 46.65 3.07
1500 1770 1.361204 TGGTGTCCATGACTCCATGT 58.639 50.000 12.60 0.00 46.73 3.21
1501 1771 1.278985 TGGTGTCCATGACTCCATGTC 59.721 52.381 12.60 0.00 46.73 3.06
1544 1829 0.977395 ACTAGCGGGCAGAAAAGTCT 59.023 50.000 0.00 0.00 32.85 3.24
1607 1892 7.524290 AGTGGCTAGTGGTCTATAAGTATGTA 58.476 38.462 0.00 0.00 0.00 2.29
1648 1933 5.875359 GTCTCCTTACTCACATGGGTTTAAG 59.125 44.000 9.93 9.93 0.00 1.85
1660 1949 9.442062 TCACATGGGTTTAAGTTATCTCCTATA 57.558 33.333 0.00 0.00 0.00 1.31
1779 2078 8.397148 TGTCAAATATGTTATGCACACACATAG 58.603 33.333 15.80 6.78 38.61 2.23
1783 2082 9.613428 AAATATGTTATGCACACACATAGTACT 57.387 29.630 15.80 0.00 38.61 2.73
1786 2085 7.359262 TGTTATGCACACACATAGTACTTTC 57.641 36.000 0.00 0.00 34.15 2.62
1864 2407 6.302313 GTGTGTTTCACGCTTTAATCACATAC 59.698 38.462 4.84 0.00 41.09 2.39
1866 2409 6.736853 GTGTTTCACGCTTTAATCACATACTC 59.263 38.462 0.00 0.00 0.00 2.59
1867 2410 6.128391 TGTTTCACGCTTTAATCACATACTCC 60.128 38.462 0.00 0.00 0.00 3.85
1868 2411 4.439057 TCACGCTTTAATCACATACTCCC 58.561 43.478 0.00 0.00 0.00 4.30
1869 2412 4.161565 TCACGCTTTAATCACATACTCCCT 59.838 41.667 0.00 0.00 0.00 4.20
1870 2413 4.508124 CACGCTTTAATCACATACTCCCTC 59.492 45.833 0.00 0.00 0.00 4.30
1871 2414 4.058817 CGCTTTAATCACATACTCCCTCC 58.941 47.826 0.00 0.00 0.00 4.30
1872 2415 4.058817 GCTTTAATCACATACTCCCTCCG 58.941 47.826 0.00 0.00 0.00 4.63
1873 2416 4.443034 GCTTTAATCACATACTCCCTCCGT 60.443 45.833 0.00 0.00 0.00 4.69
1874 2417 4.931661 TTAATCACATACTCCCTCCGTC 57.068 45.455 0.00 0.00 0.00 4.79
1875 2418 1.705873 ATCACATACTCCCTCCGTCC 58.294 55.000 0.00 0.00 0.00 4.79
1876 2419 0.396695 TCACATACTCCCTCCGTCCC 60.397 60.000 0.00 0.00 0.00 4.46
1877 2420 0.686441 CACATACTCCCTCCGTCCCA 60.686 60.000 0.00 0.00 0.00 4.37
1878 2421 0.042131 ACATACTCCCTCCGTCCCAA 59.958 55.000 0.00 0.00 0.00 4.12
1879 2422 1.200519 CATACTCCCTCCGTCCCAAA 58.799 55.000 0.00 0.00 0.00 3.28
1880 2423 1.557832 CATACTCCCTCCGTCCCAAAA 59.442 52.381 0.00 0.00 0.00 2.44
1881 2424 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
1882 2425 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
1883 2426 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
1884 2427 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
1885 2428 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
1886 2429 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
1887 2430 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
1888 2431 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
1889 2432 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
1890 2433 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
1891 2434 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
1892 2435 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
1893 2436 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
1894 2437 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
1895 2438 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
1896 2439 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
1897 2440 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
1898 2441 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
1899 2442 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
1900 2443 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
1908 2451 9.582431 TCTTGTCTTAGATTTGTCTAAATACGG 57.418 33.333 0.26 0.99 36.66 4.02
1909 2452 9.582431 CTTGTCTTAGATTTGTCTAAATACGGA 57.418 33.333 0.26 0.00 36.66 4.69
1911 2454 9.529325 TGTCTTAGATTTGTCTAAATACGGATG 57.471 33.333 0.26 0.00 36.66 3.51
1912 2455 9.530633 GTCTTAGATTTGTCTAAATACGGATGT 57.469 33.333 0.26 0.00 36.66 3.06
1927 2470 8.483307 AATACGGATGTATTAAGTCACGTTTT 57.517 30.769 0.00 0.00 46.80 2.43
1928 2471 9.585099 AATACGGATGTATTAAGTCACGTTTTA 57.415 29.630 0.00 0.00 46.80 1.52
1929 2472 7.887996 ACGGATGTATTAAGTCACGTTTTAA 57.112 32.000 0.00 0.00 0.00 1.52
1930 2473 8.483307 ACGGATGTATTAAGTCACGTTTTAAT 57.517 30.769 11.80 11.80 34.71 1.40
1931 2474 9.585099 ACGGATGTATTAAGTCACGTTTTAATA 57.415 29.630 10.40 10.40 33.06 0.98
1945 2488 9.970395 TCACGTTTTAATATTAGATACATCCGT 57.030 29.630 0.00 0.00 0.00 4.69
1963 2506 8.234136 ACATCCGTATCTAGACAAATGTAAGA 57.766 34.615 0.00 1.82 0.00 2.10
1964 2507 8.136165 ACATCCGTATCTAGACAAATGTAAGAC 58.864 37.037 0.00 0.00 0.00 3.01
1965 2508 7.634671 TCCGTATCTAGACAAATGTAAGACA 57.365 36.000 0.00 0.00 0.00 3.41
1966 2509 8.234136 TCCGTATCTAGACAAATGTAAGACAT 57.766 34.615 0.00 0.00 41.31 3.06
1967 2510 8.135529 TCCGTATCTAGACAAATGTAAGACATG 58.864 37.037 0.00 0.00 37.97 3.21
1968 2511 8.135529 CCGTATCTAGACAAATGTAAGACATGA 58.864 37.037 0.00 0.00 37.97 3.07
1969 2512 9.516314 CGTATCTAGACAAATGTAAGACATGAA 57.484 33.333 0.00 0.00 37.97 2.57
1976 2519 8.090214 AGACAAATGTAAGACATGAATTTTGGG 58.910 33.333 0.00 0.00 37.97 4.12
1977 2520 7.961351 ACAAATGTAAGACATGAATTTTGGGA 58.039 30.769 0.00 0.00 37.97 4.37
1978 2521 7.872483 ACAAATGTAAGACATGAATTTTGGGAC 59.128 33.333 0.00 0.00 37.97 4.46
1979 2522 5.621197 TGTAAGACATGAATTTTGGGACG 57.379 39.130 0.00 0.00 0.00 4.79
1980 2523 4.457603 TGTAAGACATGAATTTTGGGACGG 59.542 41.667 0.00 0.00 0.00 4.79
1981 2524 3.433306 AGACATGAATTTTGGGACGGA 57.567 42.857 0.00 0.00 0.00 4.69
1982 2525 3.347216 AGACATGAATTTTGGGACGGAG 58.653 45.455 0.00 0.00 0.00 4.63
1983 2526 2.423538 GACATGAATTTTGGGACGGAGG 59.576 50.000 0.00 0.00 0.00 4.30
1984 2527 1.750778 CATGAATTTTGGGACGGAGGG 59.249 52.381 0.00 0.00 0.00 4.30
1985 2528 1.068948 TGAATTTTGGGACGGAGGGA 58.931 50.000 0.00 0.00 0.00 4.20
1986 2529 1.004277 TGAATTTTGGGACGGAGGGAG 59.996 52.381 0.00 0.00 0.00 4.30
1987 2530 1.004394 GAATTTTGGGACGGAGGGAGT 59.996 52.381 0.00 0.00 0.00 3.85
1988 2531 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
1989 2532 0.978907 TTTTGGGACGGAGGGAGTAC 59.021 55.000 0.00 0.00 0.00 2.73
2109 2904 3.064207 GACAGAGAACACGCACCAATTA 58.936 45.455 0.00 0.00 0.00 1.40
2124 2920 6.183360 CGCACCAATTAATCAAATGGTAGAGT 60.183 38.462 8.83 0.00 31.66 3.24
2225 3021 4.319177 GTTGTTGTTGATAGTGGAGCTCT 58.681 43.478 14.64 0.00 0.00 4.09
2230 3026 1.474330 TGATAGTGGAGCTCTCGCAA 58.526 50.000 14.64 0.00 39.10 4.85
2269 3073 2.832498 GCCATGGGCTACCTCCTC 59.168 66.667 15.13 0.00 46.69 3.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.960195 CCTGTTTTTGTTTTCGTGCTTTTTATT 59.040 29.630 0.00 0.00 0.00 1.40
1 2 7.332182 TCCTGTTTTTGTTTTCGTGCTTTTTAT 59.668 29.630 0.00 0.00 0.00 1.40
2 3 6.645415 TCCTGTTTTTGTTTTCGTGCTTTTTA 59.355 30.769 0.00 0.00 0.00 1.52
3 4 5.467063 TCCTGTTTTTGTTTTCGTGCTTTTT 59.533 32.000 0.00 0.00 0.00 1.94
4 5 4.991687 TCCTGTTTTTGTTTTCGTGCTTTT 59.008 33.333 0.00 0.00 0.00 2.27
5 6 4.387559 GTCCTGTTTTTGTTTTCGTGCTTT 59.612 37.500 0.00 0.00 0.00 3.51
6 7 3.924073 GTCCTGTTTTTGTTTTCGTGCTT 59.076 39.130 0.00 0.00 0.00 3.91
7 8 3.057174 TGTCCTGTTTTTGTTTTCGTGCT 60.057 39.130 0.00 0.00 0.00 4.40
8 9 3.246619 TGTCCTGTTTTTGTTTTCGTGC 58.753 40.909 0.00 0.00 0.00 5.34
9 10 3.303229 GCTGTCCTGTTTTTGTTTTCGTG 59.697 43.478 0.00 0.00 0.00 4.35
10 11 3.507786 GCTGTCCTGTTTTTGTTTTCGT 58.492 40.909 0.00 0.00 0.00 3.85
11 12 2.857748 GGCTGTCCTGTTTTTGTTTTCG 59.142 45.455 0.00 0.00 0.00 3.46
12 13 3.616821 GTGGCTGTCCTGTTTTTGTTTTC 59.383 43.478 0.00 0.00 0.00 2.29
13 14 3.007398 TGTGGCTGTCCTGTTTTTGTTTT 59.993 39.130 0.00 0.00 0.00 2.43
14 15 2.564947 TGTGGCTGTCCTGTTTTTGTTT 59.435 40.909 0.00 0.00 0.00 2.83
15 16 2.175202 TGTGGCTGTCCTGTTTTTGTT 58.825 42.857 0.00 0.00 0.00 2.83
16 17 1.846007 TGTGGCTGTCCTGTTTTTGT 58.154 45.000 0.00 0.00 0.00 2.83
17 18 2.539476 GTTGTGGCTGTCCTGTTTTTG 58.461 47.619 0.00 0.00 0.00 2.44
18 19 1.480545 GGTTGTGGCTGTCCTGTTTTT 59.519 47.619 0.00 0.00 0.00 1.94
19 20 1.111277 GGTTGTGGCTGTCCTGTTTT 58.889 50.000 0.00 0.00 0.00 2.43
20 21 0.033601 TGGTTGTGGCTGTCCTGTTT 60.034 50.000 0.00 0.00 0.00 2.83
21 22 0.466189 CTGGTTGTGGCTGTCCTGTT 60.466 55.000 0.00 0.00 0.00 3.16
22 23 1.149174 CTGGTTGTGGCTGTCCTGT 59.851 57.895 0.00 0.00 0.00 4.00
23 24 2.263741 GCTGGTTGTGGCTGTCCTG 61.264 63.158 0.00 0.00 0.00 3.86
24 25 2.113986 GCTGGTTGTGGCTGTCCT 59.886 61.111 0.00 0.00 0.00 3.85
25 26 2.203337 TGCTGGTTGTGGCTGTCC 60.203 61.111 0.00 0.00 0.00 4.02
26 27 2.263741 CCTGCTGGTTGTGGCTGTC 61.264 63.158 0.51 0.00 0.00 3.51
27 28 2.203394 CCTGCTGGTTGTGGCTGT 60.203 61.111 0.51 0.00 0.00 4.40
28 29 3.677648 GCCTGCTGGTTGTGGCTG 61.678 66.667 11.69 0.00 41.92 4.85
29 30 3.736996 TTGCCTGCTGGTTGTGGCT 62.737 57.895 11.69 0.00 45.11 4.75
30 31 2.308968 TTTTGCCTGCTGGTTGTGGC 62.309 55.000 11.69 0.00 45.10 5.01
31 32 0.177604 TTTTTGCCTGCTGGTTGTGG 59.822 50.000 11.69 0.00 35.27 4.17
32 33 3.756739 TTTTTGCCTGCTGGTTGTG 57.243 47.368 11.69 0.00 35.27 3.33
50 51 9.668497 GGATAGGTGTTTAGTTTTCTATCTGTT 57.332 33.333 0.00 0.00 35.64 3.16
51 52 9.047947 AGGATAGGTGTTTAGTTTTCTATCTGT 57.952 33.333 0.00 0.00 35.64 3.41
62 63 8.648693 GGTCATGTAATAGGATAGGTGTTTAGT 58.351 37.037 0.00 0.00 0.00 2.24
63 64 7.813148 CGGTCATGTAATAGGATAGGTGTTTAG 59.187 40.741 0.00 0.00 0.00 1.85
64 65 7.663827 CGGTCATGTAATAGGATAGGTGTTTA 58.336 38.462 0.00 0.00 0.00 2.01
65 66 6.522054 CGGTCATGTAATAGGATAGGTGTTT 58.478 40.000 0.00 0.00 0.00 2.83
66 67 5.510861 GCGGTCATGTAATAGGATAGGTGTT 60.511 44.000 0.00 0.00 0.00 3.32
67 68 4.021368 GCGGTCATGTAATAGGATAGGTGT 60.021 45.833 0.00 0.00 0.00 4.16
68 69 4.495422 GCGGTCATGTAATAGGATAGGTG 58.505 47.826 0.00 0.00 0.00 4.00
69 70 3.514309 GGCGGTCATGTAATAGGATAGGT 59.486 47.826 0.00 0.00 0.00 3.08
70 71 3.513912 TGGCGGTCATGTAATAGGATAGG 59.486 47.826 0.00 0.00 0.00 2.57
71 72 4.801330 TGGCGGTCATGTAATAGGATAG 57.199 45.455 0.00 0.00 0.00 2.08
72 73 4.161565 GGATGGCGGTCATGTAATAGGATA 59.838 45.833 0.00 0.00 35.97 2.59
73 74 3.055094 GGATGGCGGTCATGTAATAGGAT 60.055 47.826 0.00 0.00 35.97 3.24
74 75 2.301870 GGATGGCGGTCATGTAATAGGA 59.698 50.000 0.00 0.00 35.97 2.94
75 76 2.699954 GGATGGCGGTCATGTAATAGG 58.300 52.381 0.00 0.00 35.97 2.57
76 77 2.029380 TCGGATGGCGGTCATGTAATAG 60.029 50.000 0.00 0.00 35.97 1.73
77 78 1.964933 TCGGATGGCGGTCATGTAATA 59.035 47.619 0.00 0.00 35.97 0.98
78 79 0.756294 TCGGATGGCGGTCATGTAAT 59.244 50.000 0.00 0.00 35.97 1.89
79 80 0.537653 TTCGGATGGCGGTCATGTAA 59.462 50.000 0.00 0.00 35.97 2.41
80 81 0.179094 GTTCGGATGGCGGTCATGTA 60.179 55.000 0.00 0.00 35.97 2.29
81 82 1.449601 GTTCGGATGGCGGTCATGT 60.450 57.895 0.00 0.00 35.97 3.21
82 83 2.180204 GGTTCGGATGGCGGTCATG 61.180 63.158 0.00 0.00 35.97 3.07
83 84 2.189521 GGTTCGGATGGCGGTCAT 59.810 61.111 0.00 0.00 39.13 3.06
84 85 4.444838 CGGTTCGGATGGCGGTCA 62.445 66.667 0.00 0.00 0.00 4.02
95 96 1.287425 GGCTATCTTCAACCGGTTCG 58.713 55.000 19.24 13.41 0.00 3.95
96 97 1.664873 GGGCTATCTTCAACCGGTTC 58.335 55.000 19.24 3.02 0.00 3.62
97 98 0.107848 CGGGCTATCTTCAACCGGTT 60.108 55.000 15.86 15.86 40.79 4.44
98 99 1.520666 CGGGCTATCTTCAACCGGT 59.479 57.895 0.00 0.00 40.79 5.28
99 100 4.438346 CGGGCTATCTTCAACCGG 57.562 61.111 0.00 0.00 40.79 5.28
101 102 2.394604 GCACGGGCTATCTTCAACC 58.605 57.895 0.00 0.00 36.96 3.77
112 113 4.509737 GGAGACGGTAGCACGGGC 62.510 72.222 0.00 0.00 38.39 6.13
113 114 3.834799 GGGAGACGGTAGCACGGG 61.835 72.222 0.00 0.00 38.39 5.28
114 115 2.351336 GATGGGAGACGGTAGCACGG 62.351 65.000 0.00 0.00 38.39 4.94
115 116 1.065928 GATGGGAGACGGTAGCACG 59.934 63.158 0.00 0.00 40.31 5.34
116 117 1.065928 CGATGGGAGACGGTAGCAC 59.934 63.158 0.00 0.00 0.00 4.40
117 118 2.125326 CCGATGGGAGACGGTAGCA 61.125 63.158 0.00 0.00 43.53 3.49
118 119 2.728817 CCGATGGGAGACGGTAGC 59.271 66.667 0.00 0.00 43.53 3.58
128 129 4.770531 TGGTTACTGTATCTATCCGATGGG 59.229 45.833 0.00 0.00 33.48 4.00
129 130 5.977489 TGGTTACTGTATCTATCCGATGG 57.023 43.478 0.00 0.00 33.48 3.51
130 131 7.148573 GCATTTGGTTACTGTATCTATCCGATG 60.149 40.741 0.00 0.00 33.48 3.84
131 132 6.874134 GCATTTGGTTACTGTATCTATCCGAT 59.126 38.462 0.00 0.00 36.11 4.18
132 133 6.041637 AGCATTTGGTTACTGTATCTATCCGA 59.958 38.462 0.00 0.00 0.00 4.55
133 134 6.223852 AGCATTTGGTTACTGTATCTATCCG 58.776 40.000 0.00 0.00 0.00 4.18
134 135 6.651225 GGAGCATTTGGTTACTGTATCTATCC 59.349 42.308 0.00 0.00 0.00 2.59
135 136 6.651225 GGGAGCATTTGGTTACTGTATCTATC 59.349 42.308 0.00 0.00 0.00 2.08
136 137 6.330250 AGGGAGCATTTGGTTACTGTATCTAT 59.670 38.462 0.00 0.00 0.00 1.98
137 138 5.665812 AGGGAGCATTTGGTTACTGTATCTA 59.334 40.000 0.00 0.00 0.00 1.98
138 139 4.475016 AGGGAGCATTTGGTTACTGTATCT 59.525 41.667 0.00 0.00 0.00 1.98
139 140 4.576463 CAGGGAGCATTTGGTTACTGTATC 59.424 45.833 0.00 0.00 0.00 2.24
140 141 4.526970 CAGGGAGCATTTGGTTACTGTAT 58.473 43.478 0.00 0.00 0.00 2.29
141 142 3.308117 CCAGGGAGCATTTGGTTACTGTA 60.308 47.826 11.20 0.00 31.91 2.74
142 143 2.555227 CCAGGGAGCATTTGGTTACTGT 60.555 50.000 11.20 0.00 31.91 3.55
143 144 2.094675 CCAGGGAGCATTTGGTTACTG 58.905 52.381 7.32 7.32 32.88 2.74
144 145 1.710809 ACCAGGGAGCATTTGGTTACT 59.289 47.619 0.00 0.00 42.36 2.24
145 146 2.092323 GACCAGGGAGCATTTGGTTAC 58.908 52.381 4.10 0.00 44.88 2.50
146 147 1.992557 AGACCAGGGAGCATTTGGTTA 59.007 47.619 4.10 0.00 44.88 2.85
147 148 0.779997 AGACCAGGGAGCATTTGGTT 59.220 50.000 4.10 0.00 44.88 3.67
149 150 0.394899 GGAGACCAGGGAGCATTTGG 60.395 60.000 0.00 0.00 37.98 3.28
150 151 0.745845 CGGAGACCAGGGAGCATTTG 60.746 60.000 0.00 0.00 0.00 2.32
151 152 1.201429 ACGGAGACCAGGGAGCATTT 61.201 55.000 0.00 0.00 0.00 2.32
152 153 1.201429 AACGGAGACCAGGGAGCATT 61.201 55.000 0.00 0.00 0.00 3.56
153 154 1.613630 AACGGAGACCAGGGAGCAT 60.614 57.895 0.00 0.00 0.00 3.79
154 155 2.203788 AACGGAGACCAGGGAGCA 60.204 61.111 0.00 0.00 0.00 4.26
155 156 2.266055 CAACGGAGACCAGGGAGC 59.734 66.667 0.00 0.00 0.00 4.70
156 157 1.609501 TCCAACGGAGACCAGGGAG 60.610 63.158 0.00 0.00 0.00 4.30
157 158 2.529230 TCCAACGGAGACCAGGGA 59.471 61.111 0.00 0.00 0.00 4.20
166 167 0.607217 TCGCTACTCACTCCAACGGA 60.607 55.000 0.00 0.00 0.00 4.69
167 168 0.456221 ATCGCTACTCACTCCAACGG 59.544 55.000 0.00 0.00 0.00 4.44
168 169 3.106672 GTTATCGCTACTCACTCCAACG 58.893 50.000 0.00 0.00 0.00 4.10
169 170 4.106029 TGTTATCGCTACTCACTCCAAC 57.894 45.455 0.00 0.00 0.00 3.77
170 171 5.505159 CGTATGTTATCGCTACTCACTCCAA 60.505 44.000 0.00 0.00 0.00 3.53
171 172 4.024302 CGTATGTTATCGCTACTCACTCCA 60.024 45.833 0.00 0.00 0.00 3.86
172 173 4.465016 CGTATGTTATCGCTACTCACTCC 58.535 47.826 0.00 0.00 0.00 3.85
173 174 4.212847 TCCGTATGTTATCGCTACTCACTC 59.787 45.833 0.00 0.00 0.00 3.51
174 175 4.132336 TCCGTATGTTATCGCTACTCACT 58.868 43.478 0.00 0.00 0.00 3.41
175 176 4.478843 TCCGTATGTTATCGCTACTCAC 57.521 45.455 0.00 0.00 0.00 3.51
176 177 4.758165 TCATCCGTATGTTATCGCTACTCA 59.242 41.667 0.00 0.00 34.50 3.41
177 178 5.106634 ACTCATCCGTATGTTATCGCTACTC 60.107 44.000 0.00 0.00 34.50 2.59
178 179 4.760715 ACTCATCCGTATGTTATCGCTACT 59.239 41.667 0.00 0.00 34.50 2.57
179 180 4.852104 CACTCATCCGTATGTTATCGCTAC 59.148 45.833 0.00 0.00 34.50 3.58
180 181 4.517832 ACACTCATCCGTATGTTATCGCTA 59.482 41.667 0.00 0.00 34.50 4.26
181 182 3.318275 ACACTCATCCGTATGTTATCGCT 59.682 43.478 0.00 0.00 34.50 4.93
182 183 3.639538 ACACTCATCCGTATGTTATCGC 58.360 45.455 0.00 0.00 34.50 4.58
183 184 5.851703 CACTACACTCATCCGTATGTTATCG 59.148 44.000 0.00 0.00 34.50 2.92
184 185 6.150318 CCACTACACTCATCCGTATGTTATC 58.850 44.000 0.00 0.00 34.50 1.75
185 186 5.509163 GCCACTACACTCATCCGTATGTTAT 60.509 44.000 0.00 0.00 34.50 1.89
186 187 4.202080 GCCACTACACTCATCCGTATGTTA 60.202 45.833 0.00 0.00 34.50 2.41
187 188 3.430374 GCCACTACACTCATCCGTATGTT 60.430 47.826 0.00 0.00 34.50 2.71
188 189 2.100916 GCCACTACACTCATCCGTATGT 59.899 50.000 0.00 0.00 34.50 2.29
189 190 2.545952 GGCCACTACACTCATCCGTATG 60.546 54.545 0.00 0.00 0.00 2.39
190 191 1.687123 GGCCACTACACTCATCCGTAT 59.313 52.381 0.00 0.00 0.00 3.06
191 192 1.108776 GGCCACTACACTCATCCGTA 58.891 55.000 0.00 0.00 0.00 4.02
192 193 1.614241 GGGCCACTACACTCATCCGT 61.614 60.000 4.39 0.00 0.00 4.69
193 194 1.144057 GGGCCACTACACTCATCCG 59.856 63.158 4.39 0.00 0.00 4.18
194 195 0.179000 CAGGGCCACTACACTCATCC 59.821 60.000 6.18 0.00 0.00 3.51
195 196 1.195115 TCAGGGCCACTACACTCATC 58.805 55.000 6.18 0.00 0.00 2.92
196 197 1.556911 CTTCAGGGCCACTACACTCAT 59.443 52.381 6.18 0.00 0.00 2.90
197 198 0.976641 CTTCAGGGCCACTACACTCA 59.023 55.000 6.18 0.00 0.00 3.41
198 199 1.066787 GTCTTCAGGGCCACTACACTC 60.067 57.143 6.18 0.00 0.00 3.51
199 200 0.977395 GTCTTCAGGGCCACTACACT 59.023 55.000 6.18 0.00 0.00 3.55
200 201 0.685097 TGTCTTCAGGGCCACTACAC 59.315 55.000 6.18 0.00 0.00 2.90
201 202 1.071699 GTTGTCTTCAGGGCCACTACA 59.928 52.381 6.18 0.00 0.00 2.74
202 203 1.610886 GGTTGTCTTCAGGGCCACTAC 60.611 57.143 6.18 1.31 0.00 2.73
203 204 0.690762 GGTTGTCTTCAGGGCCACTA 59.309 55.000 6.18 0.00 0.00 2.74
204 205 1.062488 AGGTTGTCTTCAGGGCCACT 61.062 55.000 6.18 0.00 0.00 4.00
205 206 0.890996 CAGGTTGTCTTCAGGGCCAC 60.891 60.000 6.18 0.00 0.00 5.01
206 207 1.455849 CAGGTTGTCTTCAGGGCCA 59.544 57.895 6.18 0.00 0.00 5.36
207 208 1.973812 GCAGGTTGTCTTCAGGGCC 60.974 63.158 0.00 0.00 0.00 5.80
208 209 0.823356 TTGCAGGTTGTCTTCAGGGC 60.823 55.000 0.00 0.00 0.00 5.19
209 210 1.202806 TCTTGCAGGTTGTCTTCAGGG 60.203 52.381 0.00 0.00 0.00 4.45
210 211 2.260844 TCTTGCAGGTTGTCTTCAGG 57.739 50.000 0.00 0.00 0.00 3.86
211 212 4.276678 TCATTTCTTGCAGGTTGTCTTCAG 59.723 41.667 0.00 0.00 0.00 3.02
212 213 4.206375 TCATTTCTTGCAGGTTGTCTTCA 58.794 39.130 0.00 0.00 0.00 3.02
213 214 4.836125 TCATTTCTTGCAGGTTGTCTTC 57.164 40.909 0.00 0.00 0.00 2.87
214 215 5.796424 ATTCATTTCTTGCAGGTTGTCTT 57.204 34.783 0.00 0.00 0.00 3.01
215 216 7.472334 AATATTCATTTCTTGCAGGTTGTCT 57.528 32.000 0.00 0.00 0.00 3.41
216 217 7.599998 ACAAATATTCATTTCTTGCAGGTTGTC 59.400 33.333 0.00 0.00 31.82 3.18
217 218 7.444299 ACAAATATTCATTTCTTGCAGGTTGT 58.556 30.769 0.00 0.00 31.82 3.32
218 219 7.894376 ACAAATATTCATTTCTTGCAGGTTG 57.106 32.000 0.00 0.00 31.82 3.77
219 220 7.933033 ACAACAAATATTCATTTCTTGCAGGTT 59.067 29.630 0.00 0.00 34.93 3.50
220 221 7.444299 ACAACAAATATTCATTTCTTGCAGGT 58.556 30.769 0.00 0.00 34.93 4.00
221 222 7.894376 ACAACAAATATTCATTTCTTGCAGG 57.106 32.000 0.00 0.00 34.93 4.85
222 223 9.199982 AGAACAACAAATATTCATTTCTTGCAG 57.800 29.630 0.00 0.00 34.93 4.41
223 224 8.980610 CAGAACAACAAATATTCATTTCTTGCA 58.019 29.630 0.00 0.00 34.93 4.08
224 225 8.981647 ACAGAACAACAAATATTCATTTCTTGC 58.018 29.630 0.00 0.00 34.93 4.01
238 239 8.436200 CGATTTGGTTTTTAACAGAACAACAAA 58.564 29.630 0.00 0.00 0.00 2.83
239 240 7.412020 GCGATTTGGTTTTTAACAGAACAACAA 60.412 33.333 0.00 0.00 0.00 2.83
240 241 6.035112 GCGATTTGGTTTTTAACAGAACAACA 59.965 34.615 0.00 0.00 0.00 3.33
241 242 6.254804 AGCGATTTGGTTTTTAACAGAACAAC 59.745 34.615 0.00 0.00 0.00 3.32
242 243 6.334202 AGCGATTTGGTTTTTAACAGAACAA 58.666 32.000 0.00 0.00 0.00 2.83
243 244 5.897050 AGCGATTTGGTTTTTAACAGAACA 58.103 33.333 0.00 0.00 0.00 3.18
244 245 6.695713 AGAAGCGATTTGGTTTTTAACAGAAC 59.304 34.615 0.00 0.00 38.70 3.01
245 246 6.695278 CAGAAGCGATTTGGTTTTTAACAGAA 59.305 34.615 0.00 0.00 38.70 3.02
246 247 6.183360 ACAGAAGCGATTTGGTTTTTAACAGA 60.183 34.615 0.00 0.00 38.70 3.41
247 248 5.977129 ACAGAAGCGATTTGGTTTTTAACAG 59.023 36.000 0.00 0.00 38.70 3.16
248 249 5.897050 ACAGAAGCGATTTGGTTTTTAACA 58.103 33.333 0.00 0.00 38.70 2.41
249 250 7.136772 ACTACAGAAGCGATTTGGTTTTTAAC 58.863 34.615 0.00 0.00 38.70 2.01
250 251 7.266922 ACTACAGAAGCGATTTGGTTTTTAA 57.733 32.000 0.00 0.00 38.70 1.52
251 252 6.870971 ACTACAGAAGCGATTTGGTTTTTA 57.129 33.333 0.00 0.00 38.70 1.52
252 253 5.767816 ACTACAGAAGCGATTTGGTTTTT 57.232 34.783 0.00 0.00 38.70 1.94
253 254 5.278315 GGAACTACAGAAGCGATTTGGTTTT 60.278 40.000 0.00 0.00 38.70 2.43
254 255 4.215613 GGAACTACAGAAGCGATTTGGTTT 59.784 41.667 0.00 0.00 38.70 3.27
255 256 3.751698 GGAACTACAGAAGCGATTTGGTT 59.248 43.478 0.00 0.00 42.02 3.67
256 257 3.244422 TGGAACTACAGAAGCGATTTGGT 60.244 43.478 0.00 0.00 0.00 3.67
257 258 3.334691 TGGAACTACAGAAGCGATTTGG 58.665 45.455 0.00 0.00 0.00 3.28
258 259 5.356882 TTTGGAACTACAGAAGCGATTTG 57.643 39.130 0.00 0.00 0.00 2.32
259 260 6.381801 CAATTTGGAACTACAGAAGCGATTT 58.618 36.000 0.00 0.00 0.00 2.17
260 261 5.619981 GCAATTTGGAACTACAGAAGCGATT 60.620 40.000 0.00 0.00 0.00 3.34
261 262 4.142600 GCAATTTGGAACTACAGAAGCGAT 60.143 41.667 0.00 0.00 0.00 4.58
262 263 3.188460 GCAATTTGGAACTACAGAAGCGA 59.812 43.478 0.00 0.00 0.00 4.93
263 264 3.492313 GCAATTTGGAACTACAGAAGCG 58.508 45.455 0.00 0.00 0.00 4.68
264 265 3.367395 GGGCAATTTGGAACTACAGAAGC 60.367 47.826 0.00 0.00 0.00 3.86
265 266 3.826157 TGGGCAATTTGGAACTACAGAAG 59.174 43.478 0.00 0.00 0.00 2.85
266 267 3.838565 TGGGCAATTTGGAACTACAGAA 58.161 40.909 0.00 0.00 0.00 3.02
267 268 3.517296 TGGGCAATTTGGAACTACAGA 57.483 42.857 0.00 0.00 0.00 3.41
268 269 4.949856 ACTATGGGCAATTTGGAACTACAG 59.050 41.667 0.00 0.00 0.00 2.74
269 270 4.929479 ACTATGGGCAATTTGGAACTACA 58.071 39.130 0.00 0.00 0.00 2.74
270 271 7.399245 TTTACTATGGGCAATTTGGAACTAC 57.601 36.000 0.00 0.00 0.00 2.73
271 272 7.451877 TGTTTTACTATGGGCAATTTGGAACTA 59.548 33.333 0.00 0.00 0.00 2.24
272 273 6.268847 TGTTTTACTATGGGCAATTTGGAACT 59.731 34.615 0.00 0.00 0.00 3.01
273 274 6.367695 GTGTTTTACTATGGGCAATTTGGAAC 59.632 38.462 0.00 0.00 0.00 3.62
274 275 6.042093 TGTGTTTTACTATGGGCAATTTGGAA 59.958 34.615 0.00 0.00 0.00 3.53
275 276 5.540337 TGTGTTTTACTATGGGCAATTTGGA 59.460 36.000 0.00 0.00 0.00 3.53
276 277 5.788450 TGTGTTTTACTATGGGCAATTTGG 58.212 37.500 0.00 0.00 0.00 3.28
277 278 8.250332 AGTATGTGTTTTACTATGGGCAATTTG 58.750 33.333 0.00 0.00 0.00 2.32
278 279 8.361169 AGTATGTGTTTTACTATGGGCAATTT 57.639 30.769 0.00 0.00 0.00 1.82
279 280 7.068226 GGAGTATGTGTTTTACTATGGGCAATT 59.932 37.037 0.00 0.00 30.15 2.32
280 281 6.546034 GGAGTATGTGTTTTACTATGGGCAAT 59.454 38.462 0.00 0.00 30.15 3.56
281 282 5.883673 GGAGTATGTGTTTTACTATGGGCAA 59.116 40.000 0.00 0.00 30.15 4.52
282 283 5.190925 AGGAGTATGTGTTTTACTATGGGCA 59.809 40.000 0.00 0.00 30.15 5.36
283 284 5.681639 AGGAGTATGTGTTTTACTATGGGC 58.318 41.667 0.00 0.00 30.15 5.36
284 285 7.709613 GTGTAGGAGTATGTGTTTTACTATGGG 59.290 40.741 0.00 0.00 30.15 4.00
285 286 7.434307 CGTGTAGGAGTATGTGTTTTACTATGG 59.566 40.741 0.00 0.00 30.15 2.74
286 287 7.434307 CCGTGTAGGAGTATGTGTTTTACTATG 59.566 40.741 0.00 0.00 45.00 2.23
287 288 7.340232 TCCGTGTAGGAGTATGTGTTTTACTAT 59.660 37.037 0.00 0.00 45.98 2.12
288 289 6.658816 TCCGTGTAGGAGTATGTGTTTTACTA 59.341 38.462 0.00 0.00 45.98 1.82
289 290 5.477984 TCCGTGTAGGAGTATGTGTTTTACT 59.522 40.000 0.00 0.00 45.98 2.24
290 291 5.713025 TCCGTGTAGGAGTATGTGTTTTAC 58.287 41.667 0.00 0.00 45.98 2.01
291 292 5.981088 TCCGTGTAGGAGTATGTGTTTTA 57.019 39.130 0.00 0.00 45.98 1.52
292 293 4.877378 TCCGTGTAGGAGTATGTGTTTT 57.123 40.909 0.00 0.00 45.98 2.43
304 305 1.880675 AGCGAGACATATCCGTGTAGG 59.119 52.381 0.00 0.00 42.97 3.18
305 306 2.290916 ACAGCGAGACATATCCGTGTAG 59.709 50.000 0.00 0.00 31.16 2.74
306 307 2.294979 ACAGCGAGACATATCCGTGTA 58.705 47.619 0.00 0.00 31.16 2.90
307 308 1.103803 ACAGCGAGACATATCCGTGT 58.896 50.000 0.00 0.00 34.39 4.49
308 309 2.209838 AACAGCGAGACATATCCGTG 57.790 50.000 0.00 0.00 0.00 4.94
309 310 2.950309 AGTAACAGCGAGACATATCCGT 59.050 45.455 0.00 0.00 0.00 4.69
310 311 3.627732 AGTAACAGCGAGACATATCCG 57.372 47.619 0.00 0.00 0.00 4.18
311 312 4.024218 ACGTAGTAACAGCGAGACATATCC 60.024 45.833 0.00 0.00 41.94 2.59
312 313 5.093169 ACGTAGTAACAGCGAGACATATC 57.907 43.478 0.00 0.00 41.94 1.63
329 330 2.628178 TGGCTAGATGGGATTGACGTAG 59.372 50.000 0.00 0.00 0.00 3.51
330 331 2.364324 GTGGCTAGATGGGATTGACGTA 59.636 50.000 0.00 0.00 0.00 3.57
331 332 1.139058 GTGGCTAGATGGGATTGACGT 59.861 52.381 0.00 0.00 0.00 4.34
332 333 1.869754 CGTGGCTAGATGGGATTGACG 60.870 57.143 0.00 0.00 0.00 4.35
333 334 1.139058 ACGTGGCTAGATGGGATTGAC 59.861 52.381 0.00 0.00 0.00 3.18
334 335 1.412710 GACGTGGCTAGATGGGATTGA 59.587 52.381 0.00 0.00 0.00 2.57
335 336 1.414181 AGACGTGGCTAGATGGGATTG 59.586 52.381 0.00 0.00 0.00 2.67
336 337 1.689273 GAGACGTGGCTAGATGGGATT 59.311 52.381 0.00 0.00 0.00 3.01
337 338 1.333177 GAGACGTGGCTAGATGGGAT 58.667 55.000 0.00 0.00 0.00 3.85
338 339 0.033503 TGAGACGTGGCTAGATGGGA 60.034 55.000 0.00 0.00 0.00 4.37
339 340 0.824109 TTGAGACGTGGCTAGATGGG 59.176 55.000 0.00 0.00 0.00 4.00
340 341 2.672961 TTTGAGACGTGGCTAGATGG 57.327 50.000 0.00 0.00 0.00 3.51
341 342 4.207224 CGTTATTTGAGACGTGGCTAGATG 59.793 45.833 0.00 0.00 34.75 2.90
342 343 4.360563 CGTTATTTGAGACGTGGCTAGAT 58.639 43.478 0.00 0.00 34.75 1.98
343 344 3.766151 CGTTATTTGAGACGTGGCTAGA 58.234 45.455 0.00 0.00 34.75 2.43
351 352 6.397831 TCCATTAACACGTTATTTGAGACG 57.602 37.500 0.00 0.00 44.34 4.18
352 353 9.274065 GAATTCCATTAACACGTTATTTGAGAC 57.726 33.333 0.00 0.00 0.00 3.36
353 354 8.172484 CGAATTCCATTAACACGTTATTTGAGA 58.828 33.333 0.00 0.00 0.00 3.27
354 355 8.172484 TCGAATTCCATTAACACGTTATTTGAG 58.828 33.333 0.00 0.00 0.00 3.02
355 356 8.030744 TCGAATTCCATTAACACGTTATTTGA 57.969 30.769 0.00 0.00 0.00 2.69
356 357 8.662369 TTCGAATTCCATTAACACGTTATTTG 57.338 30.769 0.00 0.00 0.00 2.32
357 358 7.966204 CCTTCGAATTCCATTAACACGTTATTT 59.034 33.333 0.00 0.00 0.00 1.40
358 359 7.334921 TCCTTCGAATTCCATTAACACGTTATT 59.665 33.333 0.00 0.00 0.00 1.40
359 360 6.819649 TCCTTCGAATTCCATTAACACGTTAT 59.180 34.615 0.00 0.00 0.00 1.89
360 361 6.164876 TCCTTCGAATTCCATTAACACGTTA 58.835 36.000 0.00 0.00 0.00 3.18
361 362 4.998672 TCCTTCGAATTCCATTAACACGTT 59.001 37.500 0.00 0.00 0.00 3.99
362 363 4.571919 TCCTTCGAATTCCATTAACACGT 58.428 39.130 0.00 0.00 0.00 4.49
363 364 4.630069 ACTCCTTCGAATTCCATTAACACG 59.370 41.667 0.00 0.00 0.00 4.49
364 365 6.496338 AACTCCTTCGAATTCCATTAACAC 57.504 37.500 0.00 0.00 0.00 3.32
369 370 9.204570 CGTAATATAACTCCTTCGAATTCCATT 57.795 33.333 0.00 0.00 0.00 3.16
370 371 7.331193 GCGTAATATAACTCCTTCGAATTCCAT 59.669 37.037 0.00 0.00 0.00 3.41
371 372 6.643770 GCGTAATATAACTCCTTCGAATTCCA 59.356 38.462 0.00 0.00 0.00 3.53
372 373 6.643770 TGCGTAATATAACTCCTTCGAATTCC 59.356 38.462 0.00 0.00 0.00 3.01
373 374 7.633361 TGCGTAATATAACTCCTTCGAATTC 57.367 36.000 0.00 0.00 0.00 2.17
374 375 7.924412 TCTTGCGTAATATAACTCCTTCGAATT 59.076 33.333 0.00 0.00 0.00 2.17
375 376 7.431249 TCTTGCGTAATATAACTCCTTCGAAT 58.569 34.615 0.00 0.00 0.00 3.34
376 377 6.798482 TCTTGCGTAATATAACTCCTTCGAA 58.202 36.000 0.00 0.00 0.00 3.71
377 378 6.381481 TCTTGCGTAATATAACTCCTTCGA 57.619 37.500 0.00 0.00 0.00 3.71
378 379 6.696148 ACTTCTTGCGTAATATAACTCCTTCG 59.304 38.462 0.00 0.00 0.00 3.79
379 380 8.328864 CAACTTCTTGCGTAATATAACTCCTTC 58.671 37.037 0.00 0.00 0.00 3.46
380 381 7.280205 CCAACTTCTTGCGTAATATAACTCCTT 59.720 37.037 0.00 0.00 0.00 3.36
381 382 6.761714 CCAACTTCTTGCGTAATATAACTCCT 59.238 38.462 0.00 0.00 0.00 3.69
382 383 6.537660 ACCAACTTCTTGCGTAATATAACTCC 59.462 38.462 0.00 0.00 0.00 3.85
383 384 7.535489 ACCAACTTCTTGCGTAATATAACTC 57.465 36.000 0.00 0.00 0.00 3.01
384 385 7.604927 TCAACCAACTTCTTGCGTAATATAACT 59.395 33.333 0.00 0.00 0.00 2.24
385 386 7.745015 TCAACCAACTTCTTGCGTAATATAAC 58.255 34.615 0.00 0.00 0.00 1.89
386 387 7.908827 TCAACCAACTTCTTGCGTAATATAA 57.091 32.000 0.00 0.00 0.00 0.98
387 388 7.148373 GGTTCAACCAACTTCTTGCGTAATATA 60.148 37.037 0.01 0.00 38.42 0.86
388 389 6.349033 GGTTCAACCAACTTCTTGCGTAATAT 60.349 38.462 0.01 0.00 38.42 1.28
389 390 5.049267 GGTTCAACCAACTTCTTGCGTAATA 60.049 40.000 0.01 0.00 38.42 0.98
390 391 4.261447 GGTTCAACCAACTTCTTGCGTAAT 60.261 41.667 0.01 0.00 38.42 1.89
391 392 3.065648 GGTTCAACCAACTTCTTGCGTAA 59.934 43.478 0.01 0.00 38.42 3.18
392 393 2.614983 GGTTCAACCAACTTCTTGCGTA 59.385 45.455 0.01 0.00 38.42 4.42
393 394 1.404035 GGTTCAACCAACTTCTTGCGT 59.596 47.619 0.01 0.00 38.42 5.24
438 441 9.906660 TCTTATTAACACCACAAAATAGCAAAG 57.093 29.630 0.00 0.00 0.00 2.77
457 460 6.859017 TGTACAGCGATGTTGACTCTTATTA 58.141 36.000 13.34 0.00 0.00 0.98
475 478 4.801891 AGCTTTGAATTGTGCATGTACAG 58.198 39.130 16.35 4.89 0.00 2.74
585 590 3.261643 TGAGGCATATGCAGATACCGAAT 59.738 43.478 28.07 1.61 44.36 3.34
637 659 9.511272 AATACATGTGCATCTATACATTCATGT 57.489 29.630 9.11 14.23 44.01 3.21
689 721 1.195115 TCCTTCATCACCTTCTCCCG 58.805 55.000 0.00 0.00 0.00 5.14
886 1096 3.561313 GGAGGATTTAGCTTTGTGTGGGA 60.561 47.826 0.00 0.00 0.00 4.37
900 1110 4.896482 ACTTATAGCAGTCGAGGAGGATTT 59.104 41.667 0.00 0.00 0.00 2.17
1005 1269 1.653835 CGCGCTCATCGACAGAGAG 60.654 63.158 18.11 15.83 41.67 3.20
1158 1422 1.216444 GTCATGGACGAGCAGCTCA 59.784 57.895 22.49 3.44 0.00 4.26
1173 1437 1.652563 CTCGATACGGGCGATGTCA 59.347 57.895 0.00 0.00 37.13 3.58
1357 1621 6.720112 TTACCGCCTAGCTAGATCTTTAAA 57.280 37.500 22.70 4.83 0.00 1.52
1360 1624 4.082679 CGATTACCGCCTAGCTAGATCTTT 60.083 45.833 22.70 4.88 0.00 2.52
1449 1713 7.288621 ACGCTTATAAGTATTACAAGGTACCCT 59.711 37.037 8.74 0.00 35.68 4.34
1497 1767 8.724229 GTGCATGTATACATTGACATATGACAT 58.276 33.333 15.85 2.48 34.52 3.06
1498 1768 7.095691 CGTGCATGTATACATTGACATATGACA 60.096 37.037 15.85 6.76 34.52 3.58
1499 1769 7.116233 TCGTGCATGTATACATTGACATATGAC 59.884 37.037 15.85 3.62 34.52 3.06
1500 1770 7.116233 GTCGTGCATGTATACATTGACATATGA 59.884 37.037 15.85 10.59 34.52 2.15
1501 1771 7.116805 AGTCGTGCATGTATACATTGACATATG 59.883 37.037 24.56 13.66 34.52 1.78
1502 1772 7.154656 AGTCGTGCATGTATACATTGACATAT 58.845 34.615 24.56 11.95 34.52 1.78
1503 1773 6.512297 AGTCGTGCATGTATACATTGACATA 58.488 36.000 24.56 12.19 34.52 2.29
1607 1892 3.312973 GGAGACAAGTCGATCTCACGTAT 59.687 47.826 14.09 0.00 42.73 3.06
1864 2407 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
1866 2409 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
1867 2410 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
1868 2411 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
1869 2412 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
1870 2413 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
1871 2414 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
1872 2415 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
1873 2416 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
1874 2417 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
1882 2425 9.582431 CCGTATTTAGACAAATCTAAGACAAGA 57.418 33.333 9.81 0.00 45.93 3.02
1883 2426 9.582431 TCCGTATTTAGACAAATCTAAGACAAG 57.418 33.333 9.81 3.88 45.93 3.16
1885 2428 9.529325 CATCCGTATTTAGACAAATCTAAGACA 57.471 33.333 9.81 0.00 45.93 3.41
1886 2429 9.530633 ACATCCGTATTTAGACAAATCTAAGAC 57.469 33.333 0.00 0.83 45.93 3.01
1896 2439 9.740239 GTGACTTAATACATCCGTATTTAGACA 57.260 33.333 14.76 12.43 44.27 3.41
1897 2440 8.899776 CGTGACTTAATACATCCGTATTTAGAC 58.100 37.037 14.76 10.62 44.27 2.59
1898 2441 8.623903 ACGTGACTTAATACATCCGTATTTAGA 58.376 33.333 14.76 0.00 44.27 2.10
1899 2442 8.792831 ACGTGACTTAATACATCCGTATTTAG 57.207 34.615 3.40 6.51 44.27 1.85
1900 2443 9.585099 AAACGTGACTTAATACATCCGTATTTA 57.415 29.630 3.40 0.00 44.27 1.40
1901 2444 8.483307 AAACGTGACTTAATACATCCGTATTT 57.517 30.769 3.40 0.00 44.27 1.40
1903 2446 9.585099 TTAAAACGTGACTTAATACATCCGTAT 57.415 29.630 0.00 0.00 40.15 3.06
1904 2447 8.978564 TTAAAACGTGACTTAATACATCCGTA 57.021 30.769 0.00 0.00 0.00 4.02
1905 2448 7.887996 TTAAAACGTGACTTAATACATCCGT 57.112 32.000 0.00 0.00 0.00 4.69
1919 2462 9.970395 ACGGATGTATCTAATATTAAAACGTGA 57.030 29.630 0.00 0.00 0.00 4.35
1937 2480 9.346005 TCTTACATTTGTCTAGATACGGATGTA 57.654 33.333 11.94 11.94 32.86 2.29
1938 2481 8.136165 GTCTTACATTTGTCTAGATACGGATGT 58.864 37.037 13.29 13.29 34.19 3.06
1939 2482 8.135529 TGTCTTACATTTGTCTAGATACGGATG 58.864 37.037 0.00 0.85 0.00 3.51
1940 2483 8.234136 TGTCTTACATTTGTCTAGATACGGAT 57.766 34.615 0.00 0.00 0.00 4.18
1941 2484 7.634671 TGTCTTACATTTGTCTAGATACGGA 57.365 36.000 0.00 0.00 0.00 4.69
1942 2485 8.135529 TCATGTCTTACATTTGTCTAGATACGG 58.864 37.037 0.00 0.00 36.53 4.02
1943 2486 9.516314 TTCATGTCTTACATTTGTCTAGATACG 57.484 33.333 0.00 0.00 36.53 3.06
1950 2493 8.090214 CCCAAAATTCATGTCTTACATTTGTCT 58.910 33.333 0.00 0.00 36.53 3.41
1951 2494 8.087750 TCCCAAAATTCATGTCTTACATTTGTC 58.912 33.333 0.00 0.00 36.53 3.18
1952 2495 7.872483 GTCCCAAAATTCATGTCTTACATTTGT 59.128 33.333 0.00 0.00 36.53 2.83
1953 2496 7.062138 CGTCCCAAAATTCATGTCTTACATTTG 59.938 37.037 0.00 0.00 36.53 2.32
1954 2497 7.090173 CGTCCCAAAATTCATGTCTTACATTT 58.910 34.615 0.00 0.00 36.53 2.32
1955 2498 6.350110 CCGTCCCAAAATTCATGTCTTACATT 60.350 38.462 0.00 0.00 36.53 2.71
1956 2499 5.125417 CCGTCCCAAAATTCATGTCTTACAT 59.875 40.000 0.00 0.00 39.91 2.29
1957 2500 4.457603 CCGTCCCAAAATTCATGTCTTACA 59.542 41.667 0.00 0.00 0.00 2.41
1958 2501 4.698304 TCCGTCCCAAAATTCATGTCTTAC 59.302 41.667 0.00 0.00 0.00 2.34
1959 2502 4.912586 TCCGTCCCAAAATTCATGTCTTA 58.087 39.130 0.00 0.00 0.00 2.10
1960 2503 3.758554 CTCCGTCCCAAAATTCATGTCTT 59.241 43.478 0.00 0.00 0.00 3.01
1961 2504 3.347216 CTCCGTCCCAAAATTCATGTCT 58.653 45.455 0.00 0.00 0.00 3.41
1962 2505 2.423538 CCTCCGTCCCAAAATTCATGTC 59.576 50.000 0.00 0.00 0.00 3.06
1963 2506 2.446435 CCTCCGTCCCAAAATTCATGT 58.554 47.619 0.00 0.00 0.00 3.21
1964 2507 1.750778 CCCTCCGTCCCAAAATTCATG 59.249 52.381 0.00 0.00 0.00 3.07
1965 2508 1.638589 TCCCTCCGTCCCAAAATTCAT 59.361 47.619 0.00 0.00 0.00 2.57
1966 2509 1.004277 CTCCCTCCGTCCCAAAATTCA 59.996 52.381 0.00 0.00 0.00 2.57
1967 2510 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
1968 2511 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
1969 2512 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
1970 2513 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
1971 2514 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
1972 2515 0.115745 AAGTACTCCCTCCGTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12
1973 2516 0.115745 AAAGTACTCCCTCCGTCCCA 59.884 55.000 0.00 0.00 0.00 4.37
1974 2517 1.273759 AAAAGTACTCCCTCCGTCCC 58.726 55.000 0.00 0.00 0.00 4.46
2068 2862 9.429359 CTCTGTCCTTGGTCACATAATATTATC 57.571 37.037 4.93 0.00 0.00 1.75
2091 2886 4.323417 TGATTAATTGGTGCGTGTTCTCT 58.677 39.130 0.00 0.00 0.00 3.10
2109 2904 6.380274 TCTCGGTTCTACTCTACCATTTGATT 59.620 38.462 0.00 0.00 33.94 2.57
2124 2920 5.209818 AGTGTGATTTGTTCTCGGTTCTA 57.790 39.130 0.00 0.00 0.00 2.10
2225 3021 2.498644 TGGTGTCCCAATATTTGCGA 57.501 45.000 0.00 0.00 37.98 5.10
2269 3073 1.754234 CTTCAATGGGCGGAAGGGG 60.754 63.158 0.00 0.00 37.46 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.