Multiple sequence alignment - TraesCS1B01G449000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G449000 chr1B 100.000 2506 0 0 1 2506 667919611 667917106 0.000000e+00 4628.0
1 TraesCS1B01G449000 chr1B 86.400 250 28 1 1037 1280 667930953 667931202 4.110000e-68 268.0
2 TraesCS1B01G449000 chr1B 94.040 151 8 1 1667 1816 633238466 633238316 6.970000e-56 228.0
3 TraesCS1B01G449000 chr1B 78.607 201 33 2 223 422 668031987 668031796 9.410000e-25 124.0
4 TraesCS1B01G449000 chr1B 78.065 155 23 9 41 191 667903222 667903075 1.230000e-13 87.9
5 TraesCS1B01G449000 chr1D 87.935 862 64 18 475 1335 479687218 479688040 0.000000e+00 979.0
6 TraesCS1B01G449000 chr1D 93.642 346 18 1 91 432 479686690 479687035 4.780000e-142 514.0
7 TraesCS1B01G449000 chr1D 91.880 234 19 0 2273 2506 479734683 479734916 6.680000e-86 327.0
8 TraesCS1B01G449000 chr1D 86.667 285 32 2 999 1280 479737883 479737602 6.730000e-81 311.0
9 TraesCS1B01G449000 chr1D 88.710 248 22 1 1039 1280 479750803 479750556 5.240000e-77 298.0
10 TraesCS1B01G449000 chr1D 87.600 250 25 1 1037 1280 479759370 479759121 4.080000e-73 285.0
11 TraesCS1B01G449000 chr1D 96.154 78 2 1 1328 1404 337895831 337895908 2.620000e-25 126.0
12 TraesCS1B01G449000 chr1A 92.286 350 16 4 990 1335 576065914 576065572 1.040000e-133 486.0
13 TraesCS1B01G449000 chr1A 93.231 325 15 6 499 822 576066338 576066020 2.920000e-129 472.0
14 TraesCS1B01G449000 chr1A 93.851 309 14 1 166 474 576066806 576066503 6.320000e-126 460.0
15 TraesCS1B01G449000 chr1A 92.553 282 8 6 1411 1691 576065581 576065312 2.340000e-105 392.0
16 TraesCS1B01G449000 chr1A 86.458 288 30 2 999 1280 576078262 576077978 8.710000e-80 307.0
17 TraesCS1B01G449000 chr1A 87.705 244 24 3 1043 1280 576139134 576138891 1.900000e-71 279.0
18 TraesCS1B01G449000 chr1A 87.200 250 26 1 1037 1280 576203522 576203273 1.900000e-71 279.0
19 TraesCS1B01G449000 chr1A 82.484 314 39 10 1815 2116 576063740 576063431 6.880000e-66 261.0
20 TraesCS1B01G449000 chr1A 86.260 131 9 1 1 131 576066924 576066803 1.560000e-27 134.0
21 TraesCS1B01G449000 chr1A 93.421 76 5 0 1326 1401 583530845 583530920 2.040000e-21 113.0
22 TraesCS1B01G449000 chr5B 96.970 231 7 0 2276 2506 115631033 115630803 3.020000e-104 388.0
23 TraesCS1B01G449000 chr5B 91.880 234 19 0 2273 2506 77614752 77614985 6.680000e-86 327.0
24 TraesCS1B01G449000 chr6D 94.348 230 13 0 2277 2506 461536340 461536569 1.100000e-93 353.0
25 TraesCS1B01G449000 chr6D 93.103 232 16 0 2275 2506 192102489 192102258 8.580000e-90 340.0
26 TraesCS1B01G449000 chr6D 92.672 232 17 0 2275 2506 349959964 349959733 3.990000e-88 335.0
27 TraesCS1B01G449000 chr6D 92.241 232 18 0 2275 2506 68727378 68727147 1.860000e-86 329.0
28 TraesCS1B01G449000 chr6D 94.667 75 4 0 1327 1401 450361049 450361123 1.570000e-22 117.0
29 TraesCS1B01G449000 chr6D 93.421 76 5 0 1326 1401 401777679 401777754 2.040000e-21 113.0
30 TraesCS1B01G449000 chr4D 93.534 232 15 0 2275 2506 177113625 177113856 1.850000e-91 346.0
31 TraesCS1B01G449000 chr4D 93.590 78 3 2 1325 1401 169119991 169119915 5.660000e-22 115.0
32 TraesCS1B01G449000 chr5A 92.672 232 17 0 2275 2506 454200454 454200223 3.990000e-88 335.0
33 TraesCS1B01G449000 chr7B 99.237 131 1 0 1687 1817 604331224 604331354 1.160000e-58 237.0
34 TraesCS1B01G449000 chr3A 95.890 146 5 1 1673 1817 348834428 348834573 4.170000e-58 235.0
35 TraesCS1B01G449000 chr3A 94.521 146 7 1 1673 1817 256533206 256533061 9.020000e-55 224.0
36 TraesCS1B01G449000 chr3A 94.444 144 7 1 1673 1815 348754869 348755012 1.170000e-53 220.0
37 TraesCS1B01G449000 chr4A 94.521 146 7 1 1673 1817 194485973 194486118 9.020000e-55 224.0
38 TraesCS1B01G449000 chr2A 94.483 145 6 2 1683 1826 41235656 41235513 3.240000e-54 222.0
39 TraesCS1B01G449000 chr3D 94.483 145 4 3 1678 1818 351086609 351086753 1.170000e-53 220.0
40 TraesCS1B01G449000 chr6A 93.836 146 8 1 1673 1817 423274430 423274285 4.200000e-53 219.0
41 TraesCS1B01G449000 chr7D 97.101 69 2 0 1333 1401 45835413 45835345 1.570000e-22 117.0
42 TraesCS1B01G449000 chr7D 93.506 77 5 0 1325 1401 581296260 581296336 5.660000e-22 115.0
43 TraesCS1B01G449000 chr7D 92.405 79 5 1 1323 1401 52840544 52840467 7.330000e-21 111.0
44 TraesCS1B01G449000 chr2B 94.667 75 4 0 1327 1401 479585227 479585301 1.570000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G449000 chr1B 667917106 667919611 2505 True 4628.0 4628 100.000000 1 2506 1 chr1B.!!$R3 2505
1 TraesCS1B01G449000 chr1D 479686690 479688040 1350 False 746.5 979 90.788500 91 1335 2 chr1D.!!$F3 1244
2 TraesCS1B01G449000 chr1A 576063431 576066924 3493 True 367.5 486 90.110833 1 2116 6 chr1A.!!$R4 2115

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
856 1030 0.103208 ATGCAATCCTCGTCGACTCC 59.897 55.0 14.7 0.0 0.0 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2485 3640 0.036875 GAAGGGCCAGCTAACAGTGT 59.963 55.0 6.18 0.0 0.0 3.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 9.816787 ATTTCCCAAACTACTGGAATACTTAAA 57.183 29.630 0.00 0.00 38.96 1.52
42 43 9.643735 TTTCCCAAACTACTGGAATACTTAAAA 57.356 29.630 0.00 0.00 38.96 1.52
43 44 8.857694 TCCCAAACTACTGGAATACTTAAAAG 57.142 34.615 0.00 0.00 38.96 2.27
44 45 7.886446 TCCCAAACTACTGGAATACTTAAAAGG 59.114 37.037 0.00 0.00 38.96 3.11
45 46 7.886446 CCCAAACTACTGGAATACTTAAAAGGA 59.114 37.037 0.00 0.00 38.96 3.36
46 47 9.292195 CCAAACTACTGGAATACTTAAAAGGAA 57.708 33.333 0.00 0.00 38.96 3.36
50 51 8.957466 ACTACTGGAATACTTAAAAGGAAATGC 58.043 33.333 0.00 0.00 0.00 3.56
51 52 9.178758 CTACTGGAATACTTAAAAGGAAATGCT 57.821 33.333 0.00 0.00 0.00 3.79
52 53 7.830739 ACTGGAATACTTAAAAGGAAATGCTG 58.169 34.615 0.00 0.00 0.00 4.41
53 54 7.451566 ACTGGAATACTTAAAAGGAAATGCTGT 59.548 33.333 0.00 0.00 0.00 4.40
54 55 7.826690 TGGAATACTTAAAAGGAAATGCTGTC 58.173 34.615 0.00 0.00 0.00 3.51
105 106 5.105756 GGTGGGACAATTTAGAATCAACCAG 60.106 44.000 0.00 0.00 44.16 4.00
321 322 0.108041 ACACACCCGTTTTCTGACGT 60.108 50.000 0.00 0.00 41.26 4.34
342 343 4.631377 CGTTAGAATCCAATCTCTGCAACA 59.369 41.667 0.00 0.00 0.00 3.33
414 419 8.487028 ACTAGCTCCTTTACAAGCAGTAATTAT 58.513 33.333 0.00 0.00 42.03 1.28
461 466 9.513906 TGTTATCCTTTCTGAATATTTCACACA 57.486 29.630 0.00 0.00 35.46 3.72
524 698 6.952743 AGAAGATATCAATCGACACATTTGC 58.047 36.000 5.32 0.00 37.19 3.68
556 730 3.634504 TGCTTAATCATGAGGGTGCATT 58.365 40.909 0.09 0.00 0.00 3.56
558 732 4.098349 TGCTTAATCATGAGGGTGCATTTC 59.902 41.667 0.09 0.00 0.00 2.17
560 734 3.393426 AATCATGAGGGTGCATTTCCT 57.607 42.857 0.09 6.00 35.82 3.36
655 829 3.367395 GCAACTGGGCCAAAGAGATAAAC 60.367 47.826 8.04 0.00 0.00 2.01
668 842 8.678199 CCAAAGAGATAAACAAAGTTAGATCCC 58.322 37.037 0.00 0.00 0.00 3.85
693 867 1.333177 TCCCGGGGACAAAAATGTTG 58.667 50.000 23.50 0.00 0.00 3.33
704 878 4.546674 ACAAAAATGTTGGTTCCTCCTCT 58.453 39.130 0.00 0.00 37.07 3.69
747 921 0.999712 TGATTCTCCCCCTTGTTCCC 59.000 55.000 0.00 0.00 0.00 3.97
799 973 7.716998 CAGTTTTGACCTTATGCTCCATATACT 59.283 37.037 0.00 0.00 0.00 2.12
800 974 7.716998 AGTTTTGACCTTATGCTCCATATACTG 59.283 37.037 0.00 0.00 0.00 2.74
801 975 6.747414 TTGACCTTATGCTCCATATACTGT 57.253 37.500 0.00 0.00 0.00 3.55
802 976 7.849322 TTGACCTTATGCTCCATATACTGTA 57.151 36.000 0.00 0.00 0.00 2.74
845 1019 1.233019 CCAGACCGATCATGCAATCC 58.767 55.000 0.00 0.00 0.00 3.01
846 1020 1.202734 CCAGACCGATCATGCAATCCT 60.203 52.381 0.00 0.00 0.00 3.24
847 1021 2.141517 CAGACCGATCATGCAATCCTC 58.858 52.381 0.00 0.00 0.00 3.71
848 1022 1.143305 GACCGATCATGCAATCCTCG 58.857 55.000 0.00 0.00 0.00 4.63
849 1023 0.465705 ACCGATCATGCAATCCTCGT 59.534 50.000 0.00 0.00 0.00 4.18
850 1024 1.143305 CCGATCATGCAATCCTCGTC 58.857 55.000 0.00 0.00 0.00 4.20
851 1025 0.780596 CGATCATGCAATCCTCGTCG 59.219 55.000 0.00 0.00 0.00 5.12
852 1026 1.600413 CGATCATGCAATCCTCGTCGA 60.600 52.381 0.00 0.00 0.00 4.20
853 1027 1.789464 GATCATGCAATCCTCGTCGAC 59.211 52.381 5.18 5.18 0.00 4.20
854 1028 0.817654 TCATGCAATCCTCGTCGACT 59.182 50.000 14.70 0.00 0.00 4.18
855 1029 1.202302 TCATGCAATCCTCGTCGACTC 60.202 52.381 14.70 0.00 0.00 3.36
856 1030 0.103208 ATGCAATCCTCGTCGACTCC 59.897 55.000 14.70 0.00 0.00 3.85
857 1031 0.965866 TGCAATCCTCGTCGACTCCT 60.966 55.000 14.70 0.00 0.00 3.69
858 1032 0.526524 GCAATCCTCGTCGACTCCTG 60.527 60.000 14.70 0.00 0.00 3.86
876 1050 0.464036 TGCCTGACCGCCTATAAGTG 59.536 55.000 0.00 0.00 0.00 3.16
892 1066 1.301401 GTGGCACCGCTACTCACAA 60.301 57.895 6.29 0.00 37.08 3.33
893 1067 0.882927 GTGGCACCGCTACTCACAAA 60.883 55.000 6.29 0.00 37.08 2.83
898 1072 1.798813 CACCGCTACTCACAAACTTCC 59.201 52.381 0.00 0.00 0.00 3.46
900 1074 2.158871 ACCGCTACTCACAAACTTCCAA 60.159 45.455 0.00 0.00 0.00 3.53
923 1097 3.599343 TCATTCCTCAACAATCTCACCG 58.401 45.455 0.00 0.00 0.00 4.94
927 1101 1.679944 CCTCAACAATCTCACCGGCAT 60.680 52.381 0.00 0.00 0.00 4.40
928 1102 2.086869 CTCAACAATCTCACCGGCATT 58.913 47.619 0.00 0.00 0.00 3.56
938 1112 3.069586 TCTCACCGGCATTCAACTATAGG 59.930 47.826 0.00 0.00 0.00 2.57
946 1120 5.368145 GGCATTCAACTATAGGTCACATCA 58.632 41.667 4.43 0.00 0.00 3.07
947 1121 5.237344 GGCATTCAACTATAGGTCACATCAC 59.763 44.000 4.43 0.00 0.00 3.06
948 1122 5.237344 GCATTCAACTATAGGTCACATCACC 59.763 44.000 4.43 0.00 36.58 4.02
949 1123 4.649088 TCAACTATAGGTCACATCACCG 57.351 45.455 4.43 0.00 41.90 4.94
951 1125 1.687123 ACTATAGGTCACATCACCGGC 59.313 52.381 0.00 0.00 41.90 6.13
952 1126 1.686587 CTATAGGTCACATCACCGGCA 59.313 52.381 0.00 0.00 41.90 5.69
954 1128 0.908910 TAGGTCACATCACCGGCATT 59.091 50.000 0.00 0.00 41.90 3.56
955 1129 0.392998 AGGTCACATCACCGGCATTC 60.393 55.000 0.00 0.00 41.90 2.67
956 1130 0.676466 GGTCACATCACCGGCATTCA 60.676 55.000 0.00 0.00 0.00 2.57
957 1131 1.164411 GTCACATCACCGGCATTCAA 58.836 50.000 0.00 0.00 0.00 2.69
958 1132 1.135689 GTCACATCACCGGCATTCAAC 60.136 52.381 0.00 0.00 0.00 3.18
959 1133 1.167851 CACATCACCGGCATTCAACT 58.832 50.000 0.00 0.00 0.00 3.16
960 1134 2.027653 TCACATCACCGGCATTCAACTA 60.028 45.455 0.00 0.00 0.00 2.24
961 1135 2.945008 CACATCACCGGCATTCAACTAT 59.055 45.455 0.00 0.00 0.00 2.12
964 1138 2.833794 TCACCGGCATTCAACTATAGC 58.166 47.619 0.00 0.00 0.00 2.97
965 1139 2.169561 TCACCGGCATTCAACTATAGCA 59.830 45.455 0.00 0.00 0.00 3.49
966 1140 3.141398 CACCGGCATTCAACTATAGCAT 58.859 45.455 0.00 0.00 0.00 3.79
967 1141 3.565482 CACCGGCATTCAACTATAGCATT 59.435 43.478 0.00 0.00 0.00 3.56
968 1142 3.815401 ACCGGCATTCAACTATAGCATTC 59.185 43.478 0.00 0.00 0.00 2.67
969 1143 3.189287 CCGGCATTCAACTATAGCATTCC 59.811 47.826 0.00 0.00 0.00 3.01
970 1144 4.067896 CGGCATTCAACTATAGCATTCCT 58.932 43.478 0.00 0.00 0.00 3.36
972 1146 5.065914 GGCATTCAACTATAGCATTCCTCA 58.934 41.667 0.00 0.00 0.00 3.86
973 1147 5.532406 GGCATTCAACTATAGCATTCCTCAA 59.468 40.000 0.00 0.00 0.00 3.02
974 1148 6.433766 GCATTCAACTATAGCATTCCTCAAC 58.566 40.000 0.00 0.00 0.00 3.18
975 1149 6.261826 GCATTCAACTATAGCATTCCTCAACT 59.738 38.462 0.00 0.00 0.00 3.16
976 1150 7.519649 GCATTCAACTATAGCATTCCTCAACTC 60.520 40.741 0.00 0.00 0.00 3.01
977 1151 6.544928 TCAACTATAGCATTCCTCAACTCA 57.455 37.500 0.00 0.00 0.00 3.41
978 1152 7.129457 TCAACTATAGCATTCCTCAACTCAT 57.871 36.000 0.00 0.00 0.00 2.90
980 1154 6.737720 ACTATAGCATTCCTCAACTCATCA 57.262 37.500 0.00 0.00 0.00 3.07
981 1155 6.520272 ACTATAGCATTCCTCAACTCATCAC 58.480 40.000 0.00 0.00 0.00 3.06
984 1158 3.262660 AGCATTCCTCAACTCATCACTCA 59.737 43.478 0.00 0.00 0.00 3.41
985 1159 4.080469 AGCATTCCTCAACTCATCACTCAT 60.080 41.667 0.00 0.00 0.00 2.90
987 1161 5.425630 CATTCCTCAACTCATCACTCATCA 58.574 41.667 0.00 0.00 0.00 3.07
988 1162 4.462508 TCCTCAACTCATCACTCATCAC 57.537 45.455 0.00 0.00 0.00 3.06
989 1163 4.092279 TCCTCAACTCATCACTCATCACT 58.908 43.478 0.00 0.00 0.00 3.41
990 1164 4.159321 TCCTCAACTCATCACTCATCACTC 59.841 45.833 0.00 0.00 0.00 3.51
991 1165 4.102035 TCAACTCATCACTCATCACTCG 57.898 45.455 0.00 0.00 0.00 4.18
992 1166 3.758554 TCAACTCATCACTCATCACTCGA 59.241 43.478 0.00 0.00 0.00 4.04
993 1167 3.773860 ACTCATCACTCATCACTCGAC 57.226 47.619 0.00 0.00 0.00 4.20
994 1168 2.096657 ACTCATCACTCATCACTCGACG 59.903 50.000 0.00 0.00 0.00 5.12
1011 1185 1.299850 CGGATCAATGGCGTCGCTA 60.300 57.895 18.11 12.27 0.00 4.26
1286 1461 0.672711 GAGGCCGACAGGTTTGTACC 60.673 60.000 0.00 0.00 45.39 3.34
1287 1462 1.673337 GGCCGACAGGTTTGTACCC 60.673 63.158 0.00 0.00 46.28 3.69
1288 1463 1.673337 GCCGACAGGTTTGTACCCC 60.673 63.158 0.00 0.00 46.28 4.95
1289 1464 2.063774 CCGACAGGTTTGTACCCCT 58.936 57.895 0.00 0.00 46.28 4.79
1290 1465 0.036671 CCGACAGGTTTGTACCCCTC 60.037 60.000 0.00 0.00 46.28 4.30
1299 1474 2.107726 GTTTGTACCCCTCTCCTTTGGT 59.892 50.000 0.00 0.00 34.85 3.67
1335 1510 6.183360 GGCGTGCTTATCGAATTAATAGGTAC 60.183 42.308 0.00 0.00 0.00 3.34
1336 1511 6.585322 GCGTGCTTATCGAATTAATAGGTACT 59.415 38.462 0.00 0.00 46.37 2.73
1337 1512 7.201333 GCGTGCTTATCGAATTAATAGGTACTC 60.201 40.741 0.00 0.33 41.75 2.59
1338 1513 7.272948 CGTGCTTATCGAATTAATAGGTACTCC 59.727 40.741 0.00 0.00 41.75 3.85
1339 1514 7.544915 GTGCTTATCGAATTAATAGGTACTCCC 59.455 40.741 0.00 0.00 41.75 4.30
1341 1516 7.975058 GCTTATCGAATTAATAGGTACTCCCTC 59.025 40.741 0.00 0.00 44.81 4.30
1342 1517 6.854091 ATCGAATTAATAGGTACTCCCTCC 57.146 41.667 0.00 0.00 44.81 4.30
1343 1518 4.763793 TCGAATTAATAGGTACTCCCTCCG 59.236 45.833 0.00 0.00 44.81 4.63
1344 1519 4.522022 CGAATTAATAGGTACTCCCTCCGT 59.478 45.833 0.00 0.00 44.81 4.69
1345 1520 5.707298 CGAATTAATAGGTACTCCCTCCGTA 59.293 44.000 0.00 0.00 44.81 4.02
1346 1521 6.207417 CGAATTAATAGGTACTCCCTCCGTAA 59.793 42.308 0.00 0.00 44.81 3.18
1347 1522 7.255590 CGAATTAATAGGTACTCCCTCCGTAAA 60.256 40.741 0.00 0.00 44.81 2.01
1348 1523 6.715347 TTAATAGGTACTCCCTCCGTAAAC 57.285 41.667 0.00 0.00 44.81 2.01
1349 1524 2.915657 AGGTACTCCCTCCGTAAACT 57.084 50.000 0.00 0.00 40.71 2.66
1350 1525 5.653255 ATAGGTACTCCCTCCGTAAACTA 57.347 43.478 0.00 0.00 44.81 2.24
1351 1526 4.322057 AGGTACTCCCTCCGTAAACTAA 57.678 45.455 0.00 0.00 40.71 2.24
1352 1527 4.876580 AGGTACTCCCTCCGTAAACTAAT 58.123 43.478 0.00 0.00 40.71 1.73
1353 1528 6.018433 AGGTACTCCCTCCGTAAACTAATA 57.982 41.667 0.00 0.00 40.71 0.98
1354 1529 6.618501 AGGTACTCCCTCCGTAAACTAATAT 58.381 40.000 0.00 0.00 40.71 1.28
1355 1530 7.759607 AGGTACTCCCTCCGTAAACTAATATA 58.240 38.462 0.00 0.00 40.71 0.86
1356 1531 8.227507 AGGTACTCCCTCCGTAAACTAATATAA 58.772 37.037 0.00 0.00 40.71 0.98
1357 1532 8.518702 GGTACTCCCTCCGTAAACTAATATAAG 58.481 40.741 0.00 0.00 0.00 1.73
1358 1533 9.289782 GTACTCCCTCCGTAAACTAATATAAGA 57.710 37.037 0.00 0.00 0.00 2.10
1359 1534 8.773033 ACTCCCTCCGTAAACTAATATAAGAA 57.227 34.615 0.00 0.00 0.00 2.52
1360 1535 9.377238 ACTCCCTCCGTAAACTAATATAAGAAT 57.623 33.333 0.00 0.00 0.00 2.40
1361 1536 9.640963 CTCCCTCCGTAAACTAATATAAGAATG 57.359 37.037 0.00 0.00 0.00 2.67
1362 1537 9.151177 TCCCTCCGTAAACTAATATAAGAATGT 57.849 33.333 0.00 0.00 0.00 2.71
1363 1538 9.774413 CCCTCCGTAAACTAATATAAGAATGTT 57.226 33.333 0.00 0.00 0.00 2.71
1443 1618 6.618811 AGCTTGTTGATGACATTGATTCTTC 58.381 36.000 0.00 0.00 38.26 2.87
1444 1619 6.433404 AGCTTGTTGATGACATTGATTCTTCT 59.567 34.615 0.00 0.00 38.26 2.85
1445 1620 6.746364 GCTTGTTGATGACATTGATTCTTCTC 59.254 38.462 0.00 0.00 38.26 2.87
1446 1621 6.413018 TGTTGATGACATTGATTCTTCTCG 57.587 37.500 0.00 0.00 32.00 4.04
1447 1622 5.352293 TGTTGATGACATTGATTCTTCTCGG 59.648 40.000 0.00 0.00 32.00 4.63
1448 1623 5.343307 TGATGACATTGATTCTTCTCGGA 57.657 39.130 0.00 0.00 0.00 4.55
1514 1689 5.153513 CACTTGAAGATCTAGCGAGATAGC 58.846 45.833 9.51 3.15 42.80 2.97
1538 1713 4.904853 TGGTAGGTACATGGATATGAAGCA 59.095 41.667 0.00 0.00 37.73 3.91
1539 1714 5.547666 TGGTAGGTACATGGATATGAAGCAT 59.452 40.000 0.00 0.00 37.73 3.79
1540 1715 6.728632 TGGTAGGTACATGGATATGAAGCATA 59.271 38.462 0.00 0.00 37.73 3.14
1541 1716 7.402941 TGGTAGGTACATGGATATGAAGCATAT 59.597 37.037 0.00 0.00 39.43 1.78
1579 1754 3.720526 AGCATGGATGGGGATATCCTATG 59.279 47.826 21.18 15.20 45.59 2.23
1580 1755 3.718434 GCATGGATGGGGATATCCTATGA 59.282 47.826 21.18 3.63 45.59 2.15
1581 1756 4.353191 GCATGGATGGGGATATCCTATGAT 59.647 45.833 21.18 8.14 45.59 2.45
1582 1757 5.549228 GCATGGATGGGGATATCCTATGATA 59.451 44.000 21.18 5.37 45.59 2.15
1583 1758 6.217074 GCATGGATGGGGATATCCTATGATAT 59.783 42.308 21.18 7.34 45.59 1.63
1584 1759 7.631007 CATGGATGGGGATATCCTATGATATG 58.369 42.308 21.18 14.47 45.59 1.78
1659 1834 4.496840 GCTAGCTAGAAGAAAGAGTCGACC 60.497 50.000 25.15 3.77 0.00 4.79
1681 1856 6.463360 ACCGATGCATGTTCATATGTATACA 58.537 36.000 2.46 8.27 34.22 2.29
1700 1875 9.537852 TGTATACATAATTATTACTCCCTCCGT 57.462 33.333 0.08 0.00 0.00 4.69
1702 1877 6.356186 ACATAATTATTACTCCCTCCGTCC 57.644 41.667 0.00 0.00 0.00 4.79
1703 1878 5.247792 ACATAATTATTACTCCCTCCGTCCC 59.752 44.000 0.00 0.00 0.00 4.46
1704 1879 2.852714 TTATTACTCCCTCCGTCCCA 57.147 50.000 0.00 0.00 0.00 4.37
1705 1880 2.852714 TATTACTCCCTCCGTCCCAA 57.147 50.000 0.00 0.00 0.00 4.12
1706 1881 1.961133 ATTACTCCCTCCGTCCCAAA 58.039 50.000 0.00 0.00 0.00 3.28
1707 1882 1.732117 TTACTCCCTCCGTCCCAAAA 58.268 50.000 0.00 0.00 0.00 2.44
1708 1883 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
1709 1884 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
1710 1885 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
1711 1886 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
1712 1887 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
1713 1888 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
1714 1889 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
1715 1890 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
1716 1891 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
1717 1892 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
1718 1893 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
1719 1894 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
1720 1895 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
1721 1896 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
1722 1897 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
1723 1898 7.335924 CCGTCCCAAAATTCTTGTCTTAGATTA 59.664 37.037 0.00 0.00 0.00 1.75
1724 1899 8.391106 CGTCCCAAAATTCTTGTCTTAGATTAG 58.609 37.037 0.00 0.00 0.00 1.73
1725 1900 9.232473 GTCCCAAAATTCTTGTCTTAGATTAGT 57.768 33.333 0.00 0.00 0.00 2.24
1726 1901 9.449719 TCCCAAAATTCTTGTCTTAGATTAGTC 57.550 33.333 0.00 0.00 0.00 2.59
1727 1902 9.454859 CCCAAAATTCTTGTCTTAGATTAGTCT 57.545 33.333 0.00 0.00 38.52 3.24
1735 1910 9.491675 TCTTGTCTTAGATTAGTCTAGATACGG 57.508 37.037 0.00 0.00 38.17 4.02
1736 1911 9.491675 CTTGTCTTAGATTAGTCTAGATACGGA 57.508 37.037 0.00 0.00 38.17 4.69
1738 1913 9.438228 TGTCTTAGATTAGTCTAGATACGGATG 57.562 37.037 0.00 0.00 38.17 3.51
1739 1914 9.439500 GTCTTAGATTAGTCTAGATACGGATGT 57.561 37.037 0.00 0.00 38.17 3.06
1755 1930 8.792831 ATACGGATGTATCTAACACTAAAACG 57.207 34.615 0.00 0.00 42.09 3.60
1756 1931 6.624423 ACGGATGTATCTAACACTAAAACGT 58.376 36.000 0.00 0.00 42.09 3.99
1757 1932 6.529125 ACGGATGTATCTAACACTAAAACGTG 59.471 38.462 0.00 0.00 42.09 4.49
1758 1933 6.748658 CGGATGTATCTAACACTAAAACGTGA 59.251 38.462 0.00 0.00 42.09 4.35
1759 1934 7.253552 CGGATGTATCTAACACTAAAACGTGAC 60.254 40.741 0.00 0.00 42.09 3.67
1760 1935 7.758528 GGATGTATCTAACACTAAAACGTGACT 59.241 37.037 0.00 0.00 42.09 3.41
1761 1936 9.136952 GATGTATCTAACACTAAAACGTGACTT 57.863 33.333 0.00 0.00 42.09 3.01
1762 1937 8.289440 TGTATCTAACACTAAAACGTGACTTG 57.711 34.615 0.00 0.00 38.27 3.16
1763 1938 8.136800 TGTATCTAACACTAAAACGTGACTTGA 58.863 33.333 0.00 0.00 38.27 3.02
1764 1939 9.136952 GTATCTAACACTAAAACGTGACTTGAT 57.863 33.333 0.00 0.00 38.27 2.57
1766 1941 8.511465 TCTAACACTAAAACGTGACTTGATAC 57.489 34.615 0.00 0.00 38.27 2.24
1767 1942 8.136800 TCTAACACTAAAACGTGACTTGATACA 58.863 33.333 0.00 0.00 38.27 2.29
1768 1943 7.724305 AACACTAAAACGTGACTTGATACAT 57.276 32.000 0.00 0.00 38.27 2.29
1769 1944 7.347508 ACACTAAAACGTGACTTGATACATC 57.652 36.000 0.00 0.00 38.27 3.06
1770 1945 6.367969 ACACTAAAACGTGACTTGATACATCC 59.632 38.462 0.00 0.00 38.27 3.51
1771 1946 4.921470 AAAACGTGACTTGATACATCCG 57.079 40.909 0.00 0.00 0.00 4.18
1772 1947 3.587797 AACGTGACTTGATACATCCGT 57.412 42.857 0.00 0.00 0.00 4.69
1773 1948 4.707030 AACGTGACTTGATACATCCGTA 57.293 40.909 0.00 0.00 0.00 4.02
1774 1949 4.913335 ACGTGACTTGATACATCCGTAT 57.087 40.909 0.00 0.00 41.16 3.06
1775 1950 5.258456 ACGTGACTTGATACATCCGTATT 57.742 39.130 0.00 0.00 38.48 1.89
1776 1951 5.657474 ACGTGACTTGATACATCCGTATTT 58.343 37.500 0.00 0.00 38.48 1.40
1777 1952 6.798482 ACGTGACTTGATACATCCGTATTTA 58.202 36.000 0.00 0.00 38.48 1.40
1778 1953 6.916387 ACGTGACTTGATACATCCGTATTTAG 59.084 38.462 0.00 0.00 38.48 1.85
1779 1954 7.136772 CGTGACTTGATACATCCGTATTTAGA 58.863 38.462 0.00 0.00 38.48 2.10
1780 1955 7.646526 CGTGACTTGATACATCCGTATTTAGAA 59.353 37.037 0.00 0.00 38.48 2.10
1781 1956 9.309516 GTGACTTGATACATCCGTATTTAGAAA 57.690 33.333 0.00 0.00 38.48 2.52
1782 1957 9.878667 TGACTTGATACATCCGTATTTAGAAAA 57.121 29.630 0.00 0.00 38.48 2.29
1806 1981 8.587952 AAATTTAAGACAAGAATTTTGGGACG 57.412 30.769 0.00 0.00 31.00 4.79
1807 1982 5.699097 TTAAGACAAGAATTTTGGGACGG 57.301 39.130 0.00 0.00 0.00 4.79
1808 1983 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
1809 1984 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
1810 1985 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
1811 1986 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
1812 1987 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
1813 1988 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
1820 1995 0.468648 GGGACGGAGGGAGTATTTGG 59.531 60.000 0.00 0.00 0.00 3.28
1843 2018 6.776116 TGGCAATAGTAGCTAGTACAGTACAT 59.224 38.462 13.37 1.27 33.55 2.29
1880 2055 1.148027 TGGTCTGTCTCCTTCTCCTGT 59.852 52.381 0.00 0.00 0.00 4.00
1881 2056 2.252714 GGTCTGTCTCCTTCTCCTGTT 58.747 52.381 0.00 0.00 0.00 3.16
1887 2062 5.365605 TCTGTCTCCTTCTCCTGTTTGTAAA 59.634 40.000 0.00 0.00 0.00 2.01
1895 2070 4.385825 TCTCCTGTTTGTAAATCGCAGTT 58.614 39.130 0.00 0.00 0.00 3.16
1913 2088 7.745015 TCGCAGTTTTCCTTATGTAAATGTAC 58.255 34.615 0.00 0.00 0.00 2.90
1929 2104 9.620259 TGTAAATGTACATTATATGGTCTGCAA 57.380 29.630 21.07 0.00 35.23 4.08
1931 2106 8.518430 AAATGTACATTATATGGTCTGCAACA 57.482 30.769 21.07 0.00 33.60 3.33
1953 2128 6.790319 ACAAAAATACAGTACTCCCTCCATT 58.210 36.000 0.00 0.00 0.00 3.16
1972 2147 5.240623 TCCATTCGAAAAGTGTAGTGCATTT 59.759 36.000 0.00 0.00 0.00 2.32
2001 2176 8.924511 TCTTCTGAAGTCAAATTCCATAAACT 57.075 30.769 16.43 0.00 0.00 2.66
2115 2301 9.109393 GTATTGTAGATGCAGTAAATTTCTCCA 57.891 33.333 0.00 0.00 0.00 3.86
2215 2401 6.721318 TGCTCTATATTTTGGACAGAAAGGT 58.279 36.000 0.00 0.00 0.00 3.50
2238 2424 7.404203 GGTGTATTAAATGCTAACTTACACCG 58.596 38.462 12.10 0.00 44.56 4.94
2253 2439 0.098200 CACCGCGTGAAGTCTATCGA 59.902 55.000 4.92 0.00 35.23 3.59
2271 2457 9.413048 GTCTATCGAAAATAGAAATAGACCAGG 57.587 37.037 8.84 0.00 41.14 4.45
2272 2458 8.088981 TCTATCGAAAATAGAAATAGACCAGGC 58.911 37.037 0.00 0.00 0.00 4.85
2273 2459 5.984725 TCGAAAATAGAAATAGACCAGGCA 58.015 37.500 0.00 0.00 0.00 4.75
2274 2460 6.049149 TCGAAAATAGAAATAGACCAGGCAG 58.951 40.000 0.00 0.00 0.00 4.85
2275 2461 5.817816 CGAAAATAGAAATAGACCAGGCAGT 59.182 40.000 0.00 0.00 0.00 4.40
2276 2462 6.238211 CGAAAATAGAAATAGACCAGGCAGTG 60.238 42.308 0.00 0.00 0.00 3.66
2277 2463 5.957771 AATAGAAATAGACCAGGCAGTGA 57.042 39.130 0.00 0.00 0.00 3.41
2278 2464 6.506538 AATAGAAATAGACCAGGCAGTGAT 57.493 37.500 0.00 0.00 0.00 3.06
2279 2465 7.618019 AATAGAAATAGACCAGGCAGTGATA 57.382 36.000 0.00 0.00 0.00 2.15
2280 2466 5.957771 AGAAATAGACCAGGCAGTGATAA 57.042 39.130 0.00 0.00 0.00 1.75
2281 2467 6.313519 AGAAATAGACCAGGCAGTGATAAA 57.686 37.500 0.00 0.00 0.00 1.40
2282 2468 6.904626 AGAAATAGACCAGGCAGTGATAAAT 58.095 36.000 0.00 0.00 0.00 1.40
2283 2469 6.769822 AGAAATAGACCAGGCAGTGATAAATG 59.230 38.462 0.00 0.00 0.00 2.32
2284 2470 5.636903 ATAGACCAGGCAGTGATAAATGT 57.363 39.130 0.00 0.00 0.00 2.71
2285 2471 3.614092 AGACCAGGCAGTGATAAATGTG 58.386 45.455 0.00 0.00 0.00 3.21
2286 2472 3.264193 AGACCAGGCAGTGATAAATGTGA 59.736 43.478 0.00 0.00 0.00 3.58
2287 2473 4.080129 AGACCAGGCAGTGATAAATGTGAT 60.080 41.667 0.00 0.00 0.00 3.06
2288 2474 4.202441 ACCAGGCAGTGATAAATGTGATC 58.798 43.478 0.00 0.00 0.00 2.92
2289 2475 4.080129 ACCAGGCAGTGATAAATGTGATCT 60.080 41.667 0.00 0.00 0.00 2.75
2290 2476 4.885907 CCAGGCAGTGATAAATGTGATCTT 59.114 41.667 0.00 0.00 0.00 2.40
2291 2477 5.359009 CCAGGCAGTGATAAATGTGATCTTT 59.641 40.000 0.00 0.00 0.00 2.52
2292 2478 6.543465 CCAGGCAGTGATAAATGTGATCTTTA 59.457 38.462 0.00 0.00 0.00 1.85
2293 2479 7.255035 CCAGGCAGTGATAAATGTGATCTTTAG 60.255 40.741 0.00 0.00 0.00 1.85
2294 2480 6.769822 AGGCAGTGATAAATGTGATCTTTAGG 59.230 38.462 0.00 0.00 0.00 2.69
2295 2481 6.767902 GGCAGTGATAAATGTGATCTTTAGGA 59.232 38.462 0.00 0.00 0.00 2.94
2296 2482 7.446625 GGCAGTGATAAATGTGATCTTTAGGAT 59.553 37.037 0.00 0.00 37.37 3.24
2307 2493 5.764487 GATCTTTAGGATCCTGGCAAAAG 57.236 43.478 25.28 23.04 43.65 2.27
2308 2494 3.968265 TCTTTAGGATCCTGGCAAAAGG 58.032 45.455 25.28 10.55 38.84 3.11
2309 2495 2.826674 TTAGGATCCTGGCAAAAGGG 57.173 50.000 25.28 0.00 37.96 3.95
2310 2496 1.681229 TAGGATCCTGGCAAAAGGGT 58.319 50.000 25.28 0.00 37.96 4.34
2311 2497 1.681229 AGGATCCTGGCAAAAGGGTA 58.319 50.000 15.29 0.00 37.96 3.69
2312 2498 1.285078 AGGATCCTGGCAAAAGGGTAC 59.715 52.381 15.29 0.00 37.96 3.34
2313 2499 1.379527 GATCCTGGCAAAAGGGTACG 58.620 55.000 0.00 0.00 37.96 3.67
2314 2500 0.679960 ATCCTGGCAAAAGGGTACGC 60.680 55.000 0.77 0.77 37.96 4.42
2315 2501 2.340328 CCTGGCAAAAGGGTACGCC 61.340 63.158 6.27 3.20 45.11 5.68
2317 2503 3.766432 GGCAAAAGGGTACGCCAA 58.234 55.556 6.27 0.00 44.25 4.52
2318 2504 2.272923 GGCAAAAGGGTACGCCAAT 58.727 52.632 6.27 0.00 44.25 3.16
2319 2505 1.465794 GGCAAAAGGGTACGCCAATA 58.534 50.000 6.27 0.00 44.25 1.90
2320 2506 1.404035 GGCAAAAGGGTACGCCAATAG 59.596 52.381 6.27 0.00 44.25 1.73
2321 2507 2.361789 GCAAAAGGGTACGCCAATAGA 58.638 47.619 6.27 0.00 36.17 1.98
2322 2508 2.750712 GCAAAAGGGTACGCCAATAGAA 59.249 45.455 6.27 0.00 36.17 2.10
2323 2509 3.380320 GCAAAAGGGTACGCCAATAGAAT 59.620 43.478 6.27 0.00 36.17 2.40
2324 2510 4.733523 GCAAAAGGGTACGCCAATAGAATG 60.734 45.833 6.27 0.00 36.17 2.67
2325 2511 4.497291 AAAGGGTACGCCAATAGAATGA 57.503 40.909 6.27 0.00 36.17 2.57
2326 2512 3.470645 AGGGTACGCCAATAGAATGAC 57.529 47.619 6.27 0.00 36.17 3.06
2327 2513 2.104281 AGGGTACGCCAATAGAATGACC 59.896 50.000 6.27 0.00 36.17 4.02
2328 2514 2.490991 GGTACGCCAATAGAATGACCC 58.509 52.381 0.00 0.00 34.09 4.46
2329 2515 2.104281 GGTACGCCAATAGAATGACCCT 59.896 50.000 0.00 0.00 34.09 4.34
2330 2516 2.332063 ACGCCAATAGAATGACCCTG 57.668 50.000 0.00 0.00 0.00 4.45
2331 2517 0.947244 CGCCAATAGAATGACCCTGC 59.053 55.000 0.00 0.00 0.00 4.85
2332 2518 1.475751 CGCCAATAGAATGACCCTGCT 60.476 52.381 0.00 0.00 0.00 4.24
2333 2519 2.225467 GCCAATAGAATGACCCTGCTC 58.775 52.381 0.00 0.00 0.00 4.26
2334 2520 2.487934 CCAATAGAATGACCCTGCTCG 58.512 52.381 0.00 0.00 0.00 5.03
2335 2521 1.869767 CAATAGAATGACCCTGCTCGC 59.130 52.381 0.00 0.00 0.00 5.03
2340 2526 0.179062 AATGACCCTGCTCGCAGATC 60.179 55.000 19.78 15.89 46.30 2.75
2342 2528 1.332889 TGACCCTGCTCGCAGATCAT 61.333 55.000 19.78 2.60 46.30 2.45
2343 2529 0.676184 GACCCTGCTCGCAGATCATA 59.324 55.000 19.78 0.00 46.30 2.15
2345 2531 1.696336 ACCCTGCTCGCAGATCATATT 59.304 47.619 19.78 0.00 46.30 1.28
2346 2532 2.899900 ACCCTGCTCGCAGATCATATTA 59.100 45.455 19.78 0.00 46.30 0.98
2350 2536 2.632512 TGCTCGCAGATCATATTACCCA 59.367 45.455 0.00 0.00 33.89 4.51
2352 2538 3.589988 CTCGCAGATCATATTACCCACC 58.410 50.000 0.00 0.00 33.89 4.61
2354 2540 2.615493 CGCAGATCATATTACCCACCCC 60.615 54.545 0.00 0.00 0.00 4.95
2362 2548 2.543037 ATTACCCACCCCAACCAATC 57.457 50.000 0.00 0.00 0.00 2.67
2363 2549 0.038455 TTACCCACCCCAACCAATCG 59.962 55.000 0.00 0.00 0.00 3.34
2364 2550 1.854345 TACCCACCCCAACCAATCGG 61.854 60.000 0.00 0.00 38.77 4.18
2365 2551 3.068064 CCACCCCAACCAATCGGC 61.068 66.667 0.00 0.00 34.57 5.54
2366 2552 3.068064 CACCCCAACCAATCGGCC 61.068 66.667 0.00 0.00 34.57 6.13
2368 2554 2.037208 CCCCAACCAATCGGCCTT 59.963 61.111 0.00 0.00 34.57 4.35
2369 2555 2.052104 CCCCAACCAATCGGCCTTC 61.052 63.158 0.00 0.00 34.57 3.46
2371 2557 0.684153 CCCAACCAATCGGCCTTCAT 60.684 55.000 0.00 0.00 34.57 2.57
2372 2558 0.740737 CCAACCAATCGGCCTTCATC 59.259 55.000 0.00 0.00 34.57 2.92
2373 2559 0.740737 CAACCAATCGGCCTTCATCC 59.259 55.000 0.00 0.00 34.57 3.51
2374 2560 0.331278 AACCAATCGGCCTTCATCCA 59.669 50.000 0.00 0.00 34.57 3.41
2375 2561 0.331278 ACCAATCGGCCTTCATCCAA 59.669 50.000 0.00 0.00 34.57 3.53
2376 2562 1.027357 CCAATCGGCCTTCATCCAAG 58.973 55.000 0.00 0.00 0.00 3.61
2389 2575 6.940739 CCTTCATCCAAGGTCGATATATTCT 58.059 40.000 0.00 0.00 46.36 2.40
2390 2576 6.815641 CCTTCATCCAAGGTCGATATATTCTG 59.184 42.308 0.00 0.00 46.36 3.02
2392 2578 6.016555 TCATCCAAGGTCGATATATTCTGGA 58.983 40.000 0.00 0.00 0.00 3.86
2393 2579 6.669591 TCATCCAAGGTCGATATATTCTGGAT 59.330 38.462 0.00 0.00 33.26 3.41
2394 2580 6.286240 TCCAAGGTCGATATATTCTGGATG 57.714 41.667 0.00 0.00 0.00 3.51
2395 2581 5.187772 TCCAAGGTCGATATATTCTGGATGG 59.812 44.000 0.00 0.00 0.00 3.51
2397 2583 4.033709 AGGTCGATATATTCTGGATGGGG 58.966 47.826 0.00 0.00 0.00 4.96
2398 2584 3.775316 GGTCGATATATTCTGGATGGGGT 59.225 47.826 0.00 0.00 0.00 4.95
2399 2585 4.383118 GGTCGATATATTCTGGATGGGGTG 60.383 50.000 0.00 0.00 0.00 4.61
2400 2586 3.197766 TCGATATATTCTGGATGGGGTGC 59.802 47.826 0.00 0.00 0.00 5.01
2403 2589 5.452496 CGATATATTCTGGATGGGGTGCTAG 60.452 48.000 0.00 0.00 0.00 3.42
2404 2590 1.898863 ATTCTGGATGGGGTGCTAGT 58.101 50.000 0.00 0.00 0.00 2.57
2405 2591 1.204146 TTCTGGATGGGGTGCTAGTC 58.796 55.000 0.00 0.00 0.00 2.59
2406 2592 0.691078 TCTGGATGGGGTGCTAGTCC 60.691 60.000 0.00 0.00 0.00 3.85
2407 2593 0.692419 CTGGATGGGGTGCTAGTCCT 60.692 60.000 6.18 0.00 0.00 3.85
2410 2596 1.204146 GATGGGGTGCTAGTCCTTCA 58.796 55.000 6.18 5.92 0.00 3.02
2411 2597 1.771255 GATGGGGTGCTAGTCCTTCAT 59.229 52.381 6.18 9.26 0.00 2.57
2412 2598 0.911769 TGGGGTGCTAGTCCTTCATG 59.088 55.000 6.18 0.00 0.00 3.07
2413 2599 1.204146 GGGGTGCTAGTCCTTCATGA 58.796 55.000 0.00 0.00 0.00 3.07
2414 2600 1.559682 GGGGTGCTAGTCCTTCATGAA 59.440 52.381 8.12 8.12 0.00 2.57
2415 2601 2.420687 GGGGTGCTAGTCCTTCATGAAG 60.421 54.545 25.75 25.75 38.14 3.02
2418 2604 3.526534 GTGCTAGTCCTTCATGAAGTCC 58.473 50.000 29.03 20.01 36.72 3.85
2419 2605 3.196685 GTGCTAGTCCTTCATGAAGTCCT 59.803 47.826 29.03 24.64 36.72 3.85
2420 2606 3.449018 TGCTAGTCCTTCATGAAGTCCTC 59.551 47.826 29.03 17.40 36.72 3.71
2421 2607 3.181470 GCTAGTCCTTCATGAAGTCCTCC 60.181 52.174 29.03 16.07 36.72 4.30
2422 2608 2.907892 AGTCCTTCATGAAGTCCTCCA 58.092 47.619 29.03 7.36 36.72 3.86
2423 2609 3.458831 AGTCCTTCATGAAGTCCTCCAT 58.541 45.455 29.03 9.08 36.72 3.41
2424 2610 3.199508 AGTCCTTCATGAAGTCCTCCATG 59.800 47.826 29.03 14.32 40.97 3.66
2425 2611 3.198635 GTCCTTCATGAAGTCCTCCATGA 59.801 47.826 29.03 16.14 45.03 3.07
2426 2612 3.453717 TCCTTCATGAAGTCCTCCATGAG 59.546 47.826 29.03 13.07 46.52 2.90
2427 2613 3.433314 CCTTCATGAAGTCCTCCATGAGG 60.433 52.174 29.03 10.45 46.52 3.86
2428 2614 5.913249 CCTTCATGAAGTCCTCCATGAGGT 61.913 50.000 29.03 0.00 46.52 3.85
2429 2615 7.654770 CCTTCATGAAGTCCTCCATGAGGTC 62.655 52.000 29.03 4.79 46.52 3.85
2434 2620 2.818132 CCTCCATGAGGTCCGCTC 59.182 66.667 1.84 0.00 44.25 5.03
2435 2621 2.801631 CCTCCATGAGGTCCGCTCC 61.802 68.421 1.84 0.00 44.25 4.70
2438 2624 1.198094 TCCATGAGGTCCGCTCCAAA 61.198 55.000 0.00 0.00 35.89 3.28
2439 2625 1.026718 CCATGAGGTCCGCTCCAAAC 61.027 60.000 0.00 0.00 0.00 2.93
2440 2626 0.321564 CATGAGGTCCGCTCCAAACA 60.322 55.000 0.00 0.00 0.00 2.83
2442 2628 1.671379 GAGGTCCGCTCCAAACACC 60.671 63.158 0.00 0.00 0.00 4.16
2443 2629 2.113243 GAGGTCCGCTCCAAACACCT 62.113 60.000 0.00 0.00 40.33 4.00
2445 2631 1.070786 GTCCGCTCCAAACACCTCA 59.929 57.895 0.00 0.00 0.00 3.86
2447 2633 0.250295 TCCGCTCCAAACACCTCAAG 60.250 55.000 0.00 0.00 0.00 3.02
2448 2634 1.237285 CCGCTCCAAACACCTCAAGG 61.237 60.000 0.00 0.00 42.17 3.61
2449 2635 1.856265 CGCTCCAAACACCTCAAGGC 61.856 60.000 0.00 0.00 39.32 4.35
2450 2636 1.856265 GCTCCAAACACCTCAAGGCG 61.856 60.000 0.00 0.00 39.32 5.52
2451 2637 1.228124 TCCAAACACCTCAAGGCGG 60.228 57.895 0.00 0.00 39.32 6.13
2453 2639 1.515521 CCAAACACCTCAAGGCGGTC 61.516 60.000 0.00 0.00 39.32 4.79
2454 2640 0.535102 CAAACACCTCAAGGCGGTCT 60.535 55.000 0.00 0.00 39.32 3.85
2456 2642 0.182775 AACACCTCAAGGCGGTCTTT 59.817 50.000 0.00 0.00 39.32 2.52
2460 3615 1.133915 ACCTCAAGGCGGTCTTTTTGA 60.134 47.619 0.00 0.00 39.32 2.69
2461 3616 1.953686 CCTCAAGGCGGTCTTTTTGAA 59.046 47.619 0.00 0.00 32.41 2.69
2462 3617 2.030805 CCTCAAGGCGGTCTTTTTGAAG 60.031 50.000 0.00 0.00 32.41 3.02
2465 3620 3.502211 TCAAGGCGGTCTTTTTGAAGATC 59.498 43.478 0.00 0.00 32.41 2.75
2473 3628 6.254281 GGTCTTTTTGAAGATCGATTTCCA 57.746 37.500 0.00 0.00 0.00 3.53
2477 3632 9.495754 GTCTTTTTGAAGATCGATTTCCATAAG 57.504 33.333 0.00 8.26 0.00 1.73
2478 3633 8.677300 TCTTTTTGAAGATCGATTTCCATAAGG 58.323 33.333 0.00 1.06 0.00 2.69
2479 3634 6.377327 TTTGAAGATCGATTTCCATAAGGC 57.623 37.500 0.00 0.00 33.74 4.35
2480 3635 4.389374 TGAAGATCGATTTCCATAAGGCC 58.611 43.478 0.00 0.00 33.74 5.19
2485 3640 5.485353 AGATCGATTTCCATAAGGCCTATGA 59.515 40.000 5.16 0.00 40.02 2.15
2488 3643 4.452455 CGATTTCCATAAGGCCTATGACAC 59.548 45.833 5.16 1.53 40.02 3.67
2490 3645 4.422073 TTCCATAAGGCCTATGACACTG 57.578 45.455 5.16 0.00 40.02 3.66
2496 3651 2.472029 AGGCCTATGACACTGTTAGCT 58.528 47.619 1.29 0.00 0.00 3.32
2497 3652 2.169352 AGGCCTATGACACTGTTAGCTG 59.831 50.000 1.29 0.00 0.00 4.24
2498 3653 2.555199 GCCTATGACACTGTTAGCTGG 58.445 52.381 0.00 0.00 0.00 4.85
2499 3654 2.555199 CCTATGACACTGTTAGCTGGC 58.445 52.381 0.00 0.00 0.00 4.85
2500 3655 2.555199 CTATGACACTGTTAGCTGGCC 58.445 52.381 0.00 0.00 0.00 5.36
2501 3656 0.035056 ATGACACTGTTAGCTGGCCC 60.035 55.000 0.00 0.00 0.00 5.80
2502 3657 1.127567 TGACACTGTTAGCTGGCCCT 61.128 55.000 0.00 0.00 0.00 5.19
2503 3658 0.036875 GACACTGTTAGCTGGCCCTT 59.963 55.000 0.00 0.00 0.00 3.95
2504 3659 0.036875 ACACTGTTAGCTGGCCCTTC 59.963 55.000 0.00 0.00 0.00 3.46
2505 3660 0.678048 CACTGTTAGCTGGCCCTTCC 60.678 60.000 0.00 0.00 0.00 3.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 7.939784 ATTCCAGTAGTTTGGGAAATAGTTC 57.060 36.000 0.00 0.00 43.40 3.01
15 16 9.816787 TTTAAGTATTCCAGTAGTTTGGGAAAT 57.183 29.630 0.00 0.00 43.40 2.17
20 21 8.857694 TCCTTTTAAGTATTCCAGTAGTTTGG 57.142 34.615 0.00 0.00 39.70 3.28
46 47 4.212425 TGACGAACGTTAAATGACAGCATT 59.788 37.500 0.00 0.00 46.35 3.56
47 48 3.743911 TGACGAACGTTAAATGACAGCAT 59.256 39.130 0.00 0.00 35.92 3.79
48 49 3.124560 TGACGAACGTTAAATGACAGCA 58.875 40.909 0.00 0.00 0.00 4.41
49 50 3.781341 TGACGAACGTTAAATGACAGC 57.219 42.857 0.00 0.00 0.00 4.40
50 51 6.735063 GGTAATTGACGAACGTTAAATGACAG 59.265 38.462 0.00 0.00 0.00 3.51
51 52 6.424509 AGGTAATTGACGAACGTTAAATGACA 59.575 34.615 0.00 0.00 0.00 3.58
52 53 6.824557 AGGTAATTGACGAACGTTAAATGAC 58.175 36.000 0.00 10.56 0.00 3.06
53 54 8.531622 TTAGGTAATTGACGAACGTTAAATGA 57.468 30.769 0.00 0.55 0.00 2.57
54 55 9.596677 TTTTAGGTAATTGACGAACGTTAAATG 57.403 29.630 0.00 0.00 0.00 2.32
105 106 0.179124 TTCCTTTTGTGTGTTGCGCC 60.179 50.000 4.18 0.00 0.00 6.53
135 136 3.418684 AACTGCTTTCCGGTAATGAGT 57.581 42.857 0.00 0.00 31.20 3.41
143 144 4.307443 AGAAAGAAAAACTGCTTTCCGG 57.693 40.909 10.64 0.00 46.92 5.14
198 199 6.071503 ACCTGTTTGTGTGACTCTACCTATAC 60.072 42.308 0.00 0.00 0.00 1.47
321 322 5.124457 GCTTGTTGCAGAGATTGGATTCTAA 59.876 40.000 0.00 0.00 42.31 2.10
381 382 7.221450 TGCTTGTAAAGGAGCTAGTTAGAAAA 58.779 34.615 0.00 0.00 46.35 2.29
441 446 9.277565 CGTATTTGTGTGAAATATTCAGAAAGG 57.722 33.333 4.85 0.00 41.01 3.11
461 466 4.441634 CCCTCCGATCTGAACTTCGTATTT 60.442 45.833 0.00 0.00 33.60 1.40
524 698 7.361201 CCCTCATGATTAAGCATATTTACACCG 60.361 40.741 5.78 0.00 0.00 4.94
630 804 0.971386 CTCTTTGGCCCAGTTGCATT 59.029 50.000 0.00 0.00 0.00 3.56
655 829 3.621558 GGAAGTGGGGGATCTAACTTTG 58.378 50.000 0.00 0.00 33.14 2.77
668 842 2.360439 TTTTGTCCCCGGGAAGTGGG 62.360 60.000 26.32 3.33 46.93 4.61
685 859 4.507512 GGAGAGAGGAGGAACCAACATTTT 60.508 45.833 0.00 0.00 42.04 1.82
693 867 1.749286 CGAGAGGAGAGAGGAGGAACC 60.749 61.905 0.00 0.00 39.35 3.62
799 973 5.338056 GCGGGAGATGGGAATAATATGTACA 60.338 44.000 0.00 0.00 0.00 2.90
800 974 5.116882 GCGGGAGATGGGAATAATATGTAC 58.883 45.833 0.00 0.00 0.00 2.90
801 975 4.163458 GGCGGGAGATGGGAATAATATGTA 59.837 45.833 0.00 0.00 0.00 2.29
802 976 3.054361 GGCGGGAGATGGGAATAATATGT 60.054 47.826 0.00 0.00 0.00 2.29
845 1019 2.041115 TCAGGCAGGAGTCGACGAG 61.041 63.158 10.46 2.62 0.00 4.18
846 1020 2.033602 TCAGGCAGGAGTCGACGA 59.966 61.111 10.46 0.00 0.00 4.20
847 1021 2.179517 GTCAGGCAGGAGTCGACG 59.820 66.667 10.46 0.00 0.00 5.12
848 1022 2.574399 GGTCAGGCAGGAGTCGAC 59.426 66.667 7.70 7.70 0.00 4.20
849 1023 3.062466 CGGTCAGGCAGGAGTCGA 61.062 66.667 0.00 0.00 0.00 4.20
850 1024 4.803426 GCGGTCAGGCAGGAGTCG 62.803 72.222 0.00 0.00 0.00 4.18
851 1025 4.459089 GGCGGTCAGGCAGGAGTC 62.459 72.222 0.00 0.00 45.92 3.36
876 1050 0.602905 AGTTTGTGAGTAGCGGTGCC 60.603 55.000 0.00 0.00 0.00 5.01
892 1066 4.792068 TGTTGAGGAATGAGTTGGAAGTT 58.208 39.130 0.00 0.00 0.00 2.66
893 1067 4.437682 TGTTGAGGAATGAGTTGGAAGT 57.562 40.909 0.00 0.00 0.00 3.01
898 1072 5.106396 GGTGAGATTGTTGAGGAATGAGTTG 60.106 44.000 0.00 0.00 0.00 3.16
900 1074 4.583871 GGTGAGATTGTTGAGGAATGAGT 58.416 43.478 0.00 0.00 0.00 3.41
923 1097 5.237344 GTGATGTGACCTATAGTTGAATGCC 59.763 44.000 0.00 0.00 0.00 4.40
927 1101 4.142026 CCGGTGATGTGACCTATAGTTGAA 60.142 45.833 0.00 0.00 33.35 2.69
928 1102 3.383505 CCGGTGATGTGACCTATAGTTGA 59.616 47.826 0.00 0.00 33.35 3.18
938 1112 1.135689 GTTGAATGCCGGTGATGTGAC 60.136 52.381 1.90 0.00 0.00 3.67
946 1120 3.492102 ATGCTATAGTTGAATGCCGGT 57.508 42.857 1.90 0.00 0.00 5.28
947 1121 3.189287 GGAATGCTATAGTTGAATGCCGG 59.811 47.826 0.00 0.00 0.00 6.13
948 1122 4.067896 AGGAATGCTATAGTTGAATGCCG 58.932 43.478 0.84 0.00 0.00 5.69
949 1123 5.065914 TGAGGAATGCTATAGTTGAATGCC 58.934 41.667 0.84 0.00 0.00 4.40
951 1125 7.496920 TGAGTTGAGGAATGCTATAGTTGAATG 59.503 37.037 0.84 0.00 0.00 2.67
952 1126 7.568349 TGAGTTGAGGAATGCTATAGTTGAAT 58.432 34.615 0.84 0.00 0.00 2.57
954 1128 6.544928 TGAGTTGAGGAATGCTATAGTTGA 57.455 37.500 0.84 0.00 0.00 3.18
955 1129 6.988580 TGATGAGTTGAGGAATGCTATAGTTG 59.011 38.462 0.84 0.00 0.00 3.16
956 1130 6.989169 GTGATGAGTTGAGGAATGCTATAGTT 59.011 38.462 0.84 0.00 0.00 2.24
957 1131 6.326064 AGTGATGAGTTGAGGAATGCTATAGT 59.674 38.462 0.84 0.00 0.00 2.12
958 1132 6.757237 AGTGATGAGTTGAGGAATGCTATAG 58.243 40.000 0.00 0.00 0.00 1.31
959 1133 6.324770 TGAGTGATGAGTTGAGGAATGCTATA 59.675 38.462 0.00 0.00 0.00 1.31
960 1134 5.129980 TGAGTGATGAGTTGAGGAATGCTAT 59.870 40.000 0.00 0.00 0.00 2.97
961 1135 4.467438 TGAGTGATGAGTTGAGGAATGCTA 59.533 41.667 0.00 0.00 0.00 3.49
964 1138 5.293814 GTGATGAGTGATGAGTTGAGGAATG 59.706 44.000 0.00 0.00 0.00 2.67
965 1139 5.189342 AGTGATGAGTGATGAGTTGAGGAAT 59.811 40.000 0.00 0.00 0.00 3.01
966 1140 4.529769 AGTGATGAGTGATGAGTTGAGGAA 59.470 41.667 0.00 0.00 0.00 3.36
967 1141 4.092279 AGTGATGAGTGATGAGTTGAGGA 58.908 43.478 0.00 0.00 0.00 3.71
968 1142 4.431809 GAGTGATGAGTGATGAGTTGAGG 58.568 47.826 0.00 0.00 0.00 3.86
969 1143 4.104066 CGAGTGATGAGTGATGAGTTGAG 58.896 47.826 0.00 0.00 0.00 3.02
970 1144 3.758554 TCGAGTGATGAGTGATGAGTTGA 59.241 43.478 0.00 0.00 0.00 3.18
972 1146 3.426829 CGTCGAGTGATGAGTGATGAGTT 60.427 47.826 0.00 0.00 32.56 3.01
973 1147 2.096657 CGTCGAGTGATGAGTGATGAGT 59.903 50.000 0.00 0.00 32.56 3.41
974 1148 2.540565 CCGTCGAGTGATGAGTGATGAG 60.541 54.545 0.00 0.00 32.56 2.90
975 1149 1.401905 CCGTCGAGTGATGAGTGATGA 59.598 52.381 0.00 0.00 32.56 2.92
976 1150 1.401905 TCCGTCGAGTGATGAGTGATG 59.598 52.381 0.00 0.00 32.56 3.07
977 1151 1.751437 TCCGTCGAGTGATGAGTGAT 58.249 50.000 0.00 0.00 32.56 3.06
978 1152 1.671328 GATCCGTCGAGTGATGAGTGA 59.329 52.381 1.52 0.00 32.56 3.41
980 1154 1.751437 TGATCCGTCGAGTGATGAGT 58.249 50.000 1.52 0.00 32.56 3.41
981 1155 2.851805 TTGATCCGTCGAGTGATGAG 57.148 50.000 1.52 0.00 32.56 2.90
984 1158 1.539065 GCCATTGATCCGTCGAGTGAT 60.539 52.381 0.00 0.00 0.00 3.06
985 1159 0.179111 GCCATTGATCCGTCGAGTGA 60.179 55.000 0.00 0.00 0.00 3.41
987 1161 1.226974 CGCCATTGATCCGTCGAGT 60.227 57.895 0.00 0.00 0.00 4.18
988 1162 1.209275 GACGCCATTGATCCGTCGAG 61.209 60.000 5.84 0.00 41.32 4.04
989 1163 1.226859 GACGCCATTGATCCGTCGA 60.227 57.895 5.84 0.00 41.32 4.20
990 1164 3.309675 GACGCCATTGATCCGTCG 58.690 61.111 5.84 0.00 41.32 5.12
991 1165 2.871427 GCGACGCCATTGATCCGTC 61.871 63.158 9.14 10.33 45.56 4.79
992 1166 2.011741 TAGCGACGCCATTGATCCGT 62.012 55.000 17.79 0.00 37.99 4.69
993 1167 0.667487 ATAGCGACGCCATTGATCCG 60.667 55.000 17.79 0.00 0.00 4.18
994 1168 1.071605 GATAGCGACGCCATTGATCC 58.928 55.000 17.79 0.00 0.00 3.36
1076 1250 4.544047 TGTCGTGCACTGCCAGCA 62.544 61.111 16.19 1.80 40.19 4.41
1286 1461 3.053359 AGAGGATACCAAAGGAGAGGG 57.947 52.381 0.00 0.00 37.17 4.30
1287 1462 3.068873 CGAAGAGGATACCAAAGGAGAGG 59.931 52.174 0.00 0.00 37.17 3.69
1288 1463 3.068873 CCGAAGAGGATACCAAAGGAGAG 59.931 52.174 0.00 0.00 45.00 3.20
1289 1464 3.031736 CCGAAGAGGATACCAAAGGAGA 58.968 50.000 0.00 0.00 45.00 3.71
1290 1465 2.103263 CCCGAAGAGGATACCAAAGGAG 59.897 54.545 0.00 0.00 45.00 3.69
1299 1474 1.327690 AAGCACGCCCGAAGAGGATA 61.328 55.000 0.00 0.00 45.00 2.59
1335 1510 9.640963 CATTCTTATATTAGTTTACGGAGGGAG 57.359 37.037 0.00 0.00 0.00 4.30
1336 1511 9.151177 ACATTCTTATATTAGTTTACGGAGGGA 57.849 33.333 0.00 0.00 0.00 4.20
1337 1512 9.774413 AACATTCTTATATTAGTTTACGGAGGG 57.226 33.333 0.00 0.00 0.00 4.30
1399 1574 9.667107 ACAAGCTAGCTATTAACATCACTAAAA 57.333 29.630 19.70 0.00 0.00 1.52
1400 1575 9.667107 AACAAGCTAGCTATTAACATCACTAAA 57.333 29.630 19.70 0.00 0.00 1.85
1401 1576 9.098355 CAACAAGCTAGCTATTAACATCACTAA 57.902 33.333 19.70 0.00 0.00 2.24
1402 1577 8.474831 TCAACAAGCTAGCTATTAACATCACTA 58.525 33.333 19.70 0.00 0.00 2.74
1403 1578 7.331026 TCAACAAGCTAGCTATTAACATCACT 58.669 34.615 19.70 0.00 0.00 3.41
1404 1579 7.539712 TCAACAAGCTAGCTATTAACATCAC 57.460 36.000 19.70 0.00 0.00 3.06
1405 1580 7.986889 TCATCAACAAGCTAGCTATTAACATCA 59.013 33.333 19.70 0.00 0.00 3.07
1406 1581 8.279103 GTCATCAACAAGCTAGCTATTAACATC 58.721 37.037 19.70 1.60 0.00 3.06
1407 1582 7.770433 TGTCATCAACAAGCTAGCTATTAACAT 59.230 33.333 19.70 3.47 34.03 2.71
1408 1583 7.102993 TGTCATCAACAAGCTAGCTATTAACA 58.897 34.615 19.70 10.75 34.03 2.41
1409 1584 7.539712 TGTCATCAACAAGCTAGCTATTAAC 57.460 36.000 19.70 8.42 34.03 2.01
1443 1618 6.149474 AGTTAACAACCTGAATTCATTCCGAG 59.851 38.462 8.96 0.00 35.97 4.63
1444 1619 6.001460 AGTTAACAACCTGAATTCATTCCGA 58.999 36.000 8.96 0.00 35.97 4.55
1445 1620 6.254281 AGTTAACAACCTGAATTCATTCCG 57.746 37.500 8.96 1.29 35.97 4.30
1514 1689 5.012046 TGCTTCATATCCATGTACCTACCAG 59.988 44.000 0.00 0.00 33.57 4.00
1520 1695 9.049523 CACATATATGCTTCATATCCATGTACC 57.950 37.037 12.79 0.00 35.54 3.34
1521 1696 8.554528 GCACATATATGCTTCATATCCATGTAC 58.445 37.037 12.79 6.26 42.62 2.90
1538 1713 0.108396 TGGCCAGCACGCACATATAT 59.892 50.000 0.00 0.00 0.00 0.86
1539 1714 0.532640 CTGGCCAGCACGCACATATA 60.533 55.000 22.33 0.00 0.00 0.86
1540 1715 1.820906 CTGGCCAGCACGCACATAT 60.821 57.895 22.33 0.00 0.00 1.78
1541 1716 2.436469 CTGGCCAGCACGCACATA 60.436 61.111 22.33 0.00 0.00 2.29
1579 1754 9.052759 TGACTTGCATGCATATCATATCATATC 57.947 33.333 23.37 4.68 33.19 1.63
1580 1755 8.974060 TGACTTGCATGCATATCATATCATAT 57.026 30.769 23.37 0.00 33.19 1.78
1581 1756 8.974060 ATGACTTGCATGCATATCATATCATA 57.026 30.769 31.09 13.61 35.42 2.15
1582 1757 7.881775 ATGACTTGCATGCATATCATATCAT 57.118 32.000 31.09 22.71 35.42 2.45
1643 1818 2.416162 GCATCGGTCGACTCTTTCTTCT 60.416 50.000 16.46 0.00 0.00 2.85
1681 1856 5.408824 TGGGACGGAGGGAGTAATAATTAT 58.591 41.667 0.00 0.00 0.00 1.28
1687 1862 1.961133 TTTGGGACGGAGGGAGTAAT 58.039 50.000 0.00 0.00 0.00 1.89
1691 1866 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
1692 1867 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
1693 1868 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
1694 1869 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
1695 1870 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
1696 1871 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
1697 1872 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
1698 1873 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
1699 1874 9.232473 ACTAATCTAAGACAAGAATTTTGGGAC 57.768 33.333 5.68 0.00 0.00 4.46
1700 1875 9.449719 GACTAATCTAAGACAAGAATTTTGGGA 57.550 33.333 5.68 0.00 0.00 4.37
1701 1876 9.454859 AGACTAATCTAAGACAAGAATTTTGGG 57.545 33.333 5.68 0.00 31.46 4.12
1709 1884 9.491675 CCGTATCTAGACTAATCTAAGACAAGA 57.508 37.037 0.00 0.00 36.98 3.02
1710 1885 9.491675 TCCGTATCTAGACTAATCTAAGACAAG 57.508 37.037 0.00 0.00 36.98 3.16
1712 1887 9.438228 CATCCGTATCTAGACTAATCTAAGACA 57.562 37.037 0.00 0.00 36.98 3.41
1713 1888 9.439500 ACATCCGTATCTAGACTAATCTAAGAC 57.561 37.037 0.00 0.00 36.98 3.01
1730 1905 8.408601 ACGTTTTAGTGTTAGATACATCCGTAT 58.591 33.333 0.00 0.00 41.16 3.06
1731 1906 7.697710 CACGTTTTAGTGTTAGATACATCCGTA 59.302 37.037 0.00 0.00 39.39 4.02
1732 1907 6.529125 CACGTTTTAGTGTTAGATACATCCGT 59.471 38.462 0.00 0.00 39.39 4.69
1733 1908 6.748658 TCACGTTTTAGTGTTAGATACATCCG 59.251 38.462 0.00 0.00 42.40 4.18
1734 1909 7.758528 AGTCACGTTTTAGTGTTAGATACATCC 59.241 37.037 0.00 0.00 42.40 3.51
1735 1910 8.684973 AGTCACGTTTTAGTGTTAGATACATC 57.315 34.615 0.00 0.00 42.40 3.06
1736 1911 8.922676 CAAGTCACGTTTTAGTGTTAGATACAT 58.077 33.333 0.00 0.00 42.40 2.29
1737 1912 8.136800 TCAAGTCACGTTTTAGTGTTAGATACA 58.863 33.333 0.00 0.00 42.40 2.29
1738 1913 8.511465 TCAAGTCACGTTTTAGTGTTAGATAC 57.489 34.615 0.00 0.00 42.40 2.24
1740 1915 9.136952 GTATCAAGTCACGTTTTAGTGTTAGAT 57.863 33.333 0.00 0.00 42.40 1.98
1741 1916 8.136800 TGTATCAAGTCACGTTTTAGTGTTAGA 58.863 33.333 0.00 0.00 42.40 2.10
1742 1917 8.289440 TGTATCAAGTCACGTTTTAGTGTTAG 57.711 34.615 0.00 0.00 42.40 2.34
1743 1918 8.821147 ATGTATCAAGTCACGTTTTAGTGTTA 57.179 30.769 0.00 0.00 42.40 2.41
1744 1919 7.095355 GGATGTATCAAGTCACGTTTTAGTGTT 60.095 37.037 0.00 0.00 42.40 3.32
1745 1920 6.367969 GGATGTATCAAGTCACGTTTTAGTGT 59.632 38.462 0.00 0.00 42.40 3.55
1746 1921 6.453791 CGGATGTATCAAGTCACGTTTTAGTG 60.454 42.308 0.00 0.00 43.11 2.74
1747 1922 5.575606 CGGATGTATCAAGTCACGTTTTAGT 59.424 40.000 0.00 0.00 0.00 2.24
1748 1923 5.575606 ACGGATGTATCAAGTCACGTTTTAG 59.424 40.000 0.00 0.00 0.00 1.85
1749 1924 5.472148 ACGGATGTATCAAGTCACGTTTTA 58.528 37.500 0.00 0.00 0.00 1.52
1750 1925 4.312443 ACGGATGTATCAAGTCACGTTTT 58.688 39.130 0.00 0.00 0.00 2.43
1751 1926 3.921677 ACGGATGTATCAAGTCACGTTT 58.078 40.909 0.00 0.00 0.00 3.60
1752 1927 3.587797 ACGGATGTATCAAGTCACGTT 57.412 42.857 0.00 0.00 0.00 3.99
1753 1928 4.913335 ATACGGATGTATCAAGTCACGT 57.087 40.909 0.00 0.00 36.56 4.49
1754 1929 7.136772 TCTAAATACGGATGTATCAAGTCACG 58.863 38.462 0.00 0.00 40.42 4.35
1755 1930 8.867112 TTCTAAATACGGATGTATCAAGTCAC 57.133 34.615 0.00 0.00 40.42 3.67
1756 1931 9.878667 TTTTCTAAATACGGATGTATCAAGTCA 57.121 29.630 0.00 0.00 40.42 3.41
1780 1955 9.040939 CGTCCCAAAATTCTTGTCTTAAATTTT 57.959 29.630 0.00 0.00 41.07 1.82
1781 1956 7.655732 CCGTCCCAAAATTCTTGTCTTAAATTT 59.344 33.333 0.00 0.00 34.86 1.82
1782 1957 7.014808 TCCGTCCCAAAATTCTTGTCTTAAATT 59.985 33.333 0.00 0.00 0.00 1.82
1783 1958 6.492087 TCCGTCCCAAAATTCTTGTCTTAAAT 59.508 34.615 0.00 0.00 0.00 1.40
1784 1959 5.828859 TCCGTCCCAAAATTCTTGTCTTAAA 59.171 36.000 0.00 0.00 0.00 1.52
1785 1960 5.378332 TCCGTCCCAAAATTCTTGTCTTAA 58.622 37.500 0.00 0.00 0.00 1.85
1786 1961 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
1787 1962 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
1788 1963 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
1789 1964 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
1790 1965 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
1791 1966 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
1792 1967 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
1793 1968 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
1794 1969 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
1795 1970 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
1796 1971 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
1797 1972 1.961133 ATACTCCCTCCGTCCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
1798 1973 1.961133 AATACTCCCTCCGTCCCAAA 58.039 50.000 0.00 0.00 0.00 3.28
1799 1974 1.557832 CAAATACTCCCTCCGTCCCAA 59.442 52.381 0.00 0.00 0.00 4.12
1800 1975 1.200519 CAAATACTCCCTCCGTCCCA 58.799 55.000 0.00 0.00 0.00 4.37
1801 1976 0.468648 CCAAATACTCCCTCCGTCCC 59.531 60.000 0.00 0.00 0.00 4.46
1802 1977 0.179054 GCCAAATACTCCCTCCGTCC 60.179 60.000 0.00 0.00 0.00 4.79
1803 1978 0.539986 TGCCAAATACTCCCTCCGTC 59.460 55.000 0.00 0.00 0.00 4.79
1804 1979 0.988832 TTGCCAAATACTCCCTCCGT 59.011 50.000 0.00 0.00 0.00 4.69
1805 1980 2.348411 ATTGCCAAATACTCCCTCCG 57.652 50.000 0.00 0.00 0.00 4.63
1806 1981 4.439253 ACTATTGCCAAATACTCCCTCC 57.561 45.455 0.00 0.00 0.00 4.30
1807 1982 4.998033 GCTACTATTGCCAAATACTCCCTC 59.002 45.833 0.00 0.00 0.00 4.30
1808 1983 4.660771 AGCTACTATTGCCAAATACTCCCT 59.339 41.667 0.00 0.00 0.00 4.20
1809 1984 4.974399 AGCTACTATTGCCAAATACTCCC 58.026 43.478 0.00 0.00 0.00 4.30
1810 1985 6.760291 ACTAGCTACTATTGCCAAATACTCC 58.240 40.000 0.00 0.00 0.00 3.85
1811 1986 8.358148 TGTACTAGCTACTATTGCCAAATACTC 58.642 37.037 0.00 0.00 0.00 2.59
1812 1987 8.246430 TGTACTAGCTACTATTGCCAAATACT 57.754 34.615 0.00 0.00 0.00 2.12
1813 1988 8.142551 ACTGTACTAGCTACTATTGCCAAATAC 58.857 37.037 0.00 0.00 0.00 1.89
1843 2018 9.601810 AGACAGACCATCCTATAACATGTAATA 57.398 33.333 0.00 0.00 0.00 0.98
1848 2023 5.541868 AGGAGACAGACCATCCTATAACATG 59.458 44.000 0.00 0.00 41.72 3.21
1857 2032 1.760029 GGAGAAGGAGACAGACCATCC 59.240 57.143 0.00 0.00 0.00 3.51
1860 2035 1.148027 ACAGGAGAAGGAGACAGACCA 59.852 52.381 0.00 0.00 0.00 4.02
1867 2042 5.479306 CGATTTACAAACAGGAGAAGGAGA 58.521 41.667 0.00 0.00 0.00 3.71
1880 2055 7.653647 ACATAAGGAAAACTGCGATTTACAAA 58.346 30.769 0.00 0.00 0.00 2.83
1881 2056 7.209471 ACATAAGGAAAACTGCGATTTACAA 57.791 32.000 0.00 0.00 0.00 2.41
1887 2062 7.391148 ACATTTACATAAGGAAAACTGCGAT 57.609 32.000 0.00 0.00 0.00 4.58
1913 2088 9.800433 TGTATTTTTGTTGCAGACCATATAATG 57.200 29.630 0.00 0.00 0.00 1.90
1920 2095 5.825679 AGTACTGTATTTTTGTTGCAGACCA 59.174 36.000 0.00 0.00 0.00 4.02
1921 2096 6.313744 AGTACTGTATTTTTGTTGCAGACC 57.686 37.500 0.00 0.00 0.00 3.85
1926 2101 5.106277 GGAGGGAGTACTGTATTTTTGTTGC 60.106 44.000 0.00 0.00 0.00 4.17
1929 2104 5.836024 TGGAGGGAGTACTGTATTTTTGT 57.164 39.130 0.00 0.00 0.00 2.83
1931 2106 6.070424 TCGAATGGAGGGAGTACTGTATTTTT 60.070 38.462 0.00 0.00 0.00 1.94
2089 2273 9.109393 TGGAGAAATTTACTGCATCTACAATAC 57.891 33.333 7.43 0.00 31.32 1.89
2132 2318 0.976641 ATCAGACTTCACCCGCAGAA 59.023 50.000 0.00 0.00 0.00 3.02
2133 2319 0.976641 AATCAGACTTCACCCGCAGA 59.023 50.000 0.00 0.00 0.00 4.26
2134 2320 2.672961 TAATCAGACTTCACCCGCAG 57.327 50.000 0.00 0.00 0.00 5.18
2135 2321 3.410631 TTTAATCAGACTTCACCCGCA 57.589 42.857 0.00 0.00 0.00 5.69
2136 2322 4.965119 AATTTAATCAGACTTCACCCGC 57.035 40.909 0.00 0.00 0.00 6.13
2137 2323 7.812648 TGTAAAATTTAATCAGACTTCACCCG 58.187 34.615 0.00 0.00 0.00 5.28
2138 2324 9.974980 TTTGTAAAATTTAATCAGACTTCACCC 57.025 29.630 0.00 0.00 0.00 4.61
2188 2374 8.997323 CCTTTCTGTCCAAAATATAGAGCATAG 58.003 37.037 0.00 0.00 0.00 2.23
2215 2401 6.237888 CGCGGTGTAAGTTAGCATTTAATACA 60.238 38.462 0.00 0.00 0.00 2.29
2234 2420 0.098200 TCGATAGACTTCACGCGGTG 59.902 55.000 12.47 6.71 42.67 4.94
2253 2439 6.721318 TCACTGCCTGGTCTATTTCTATTTT 58.279 36.000 0.00 0.00 0.00 1.82
2270 2456 6.767902 TCCTAAAGATCACATTTATCACTGCC 59.232 38.462 0.00 0.00 0.00 4.85
2271 2457 7.792374 TCCTAAAGATCACATTTATCACTGC 57.208 36.000 0.00 0.00 0.00 4.40
2286 2472 4.540715 CCTTTTGCCAGGATCCTAAAGAT 58.459 43.478 26.34 0.11 35.71 2.40
2287 2473 3.309121 CCCTTTTGCCAGGATCCTAAAGA 60.309 47.826 26.34 12.67 35.71 2.52
2288 2474 3.026694 CCCTTTTGCCAGGATCCTAAAG 58.973 50.000 20.98 20.98 35.71 1.85
2289 2475 2.381961 ACCCTTTTGCCAGGATCCTAAA 59.618 45.455 15.67 9.10 35.71 1.85
2290 2476 2.000048 ACCCTTTTGCCAGGATCCTAA 59.000 47.619 15.67 2.05 35.71 2.69
2291 2477 1.681229 ACCCTTTTGCCAGGATCCTA 58.319 50.000 15.67 0.00 35.71 2.94
2292 2478 1.285078 GTACCCTTTTGCCAGGATCCT 59.715 52.381 9.02 9.02 35.71 3.24
2293 2479 1.763968 GTACCCTTTTGCCAGGATCC 58.236 55.000 2.48 2.48 35.71 3.36
2294 2480 1.379527 CGTACCCTTTTGCCAGGATC 58.620 55.000 0.00 0.00 35.71 3.36
2295 2481 0.679960 GCGTACCCTTTTGCCAGGAT 60.680 55.000 0.00 0.00 35.71 3.24
2296 2482 1.302993 GCGTACCCTTTTGCCAGGA 60.303 57.895 0.00 0.00 35.71 3.86
2297 2483 2.340328 GGCGTACCCTTTTGCCAGG 61.340 63.158 2.70 0.00 46.76 4.45
2298 2484 3.274067 GGCGTACCCTTTTGCCAG 58.726 61.111 2.70 0.00 46.76 4.85
2301 2487 2.361789 TCTATTGGCGTACCCTTTTGC 58.638 47.619 2.61 0.00 33.59 3.68
2302 2488 4.638421 TCATTCTATTGGCGTACCCTTTTG 59.362 41.667 2.61 0.00 33.59 2.44
2303 2489 4.638865 GTCATTCTATTGGCGTACCCTTTT 59.361 41.667 2.61 0.00 33.59 2.27
2304 2490 4.196971 GTCATTCTATTGGCGTACCCTTT 58.803 43.478 2.61 0.00 33.59 3.11
2305 2491 3.433173 GGTCATTCTATTGGCGTACCCTT 60.433 47.826 2.61 0.00 33.59 3.95
2306 2492 2.104281 GGTCATTCTATTGGCGTACCCT 59.896 50.000 2.61 0.00 33.59 4.34
2307 2493 2.490991 GGTCATTCTATTGGCGTACCC 58.509 52.381 0.00 0.00 33.59 3.69
2308 2494 2.104281 AGGGTCATTCTATTGGCGTACC 59.896 50.000 0.00 0.00 0.00 3.34
2309 2495 3.131396 CAGGGTCATTCTATTGGCGTAC 58.869 50.000 0.00 0.00 0.00 3.67
2310 2496 2.484770 GCAGGGTCATTCTATTGGCGTA 60.485 50.000 0.00 0.00 0.00 4.42
2311 2497 1.747206 GCAGGGTCATTCTATTGGCGT 60.747 52.381 0.00 0.00 0.00 5.68
2312 2498 0.947244 GCAGGGTCATTCTATTGGCG 59.053 55.000 0.00 0.00 0.00 5.69
2313 2499 2.225467 GAGCAGGGTCATTCTATTGGC 58.775 52.381 0.00 0.00 0.00 4.52
2314 2500 2.487934 CGAGCAGGGTCATTCTATTGG 58.512 52.381 0.00 0.00 0.00 3.16
2315 2501 1.869767 GCGAGCAGGGTCATTCTATTG 59.130 52.381 0.00 0.00 0.00 1.90
2316 2502 1.486310 TGCGAGCAGGGTCATTCTATT 59.514 47.619 0.00 0.00 0.00 1.73
2317 2503 1.069823 CTGCGAGCAGGGTCATTCTAT 59.930 52.381 16.69 0.00 40.17 1.98
2318 2504 0.461548 CTGCGAGCAGGGTCATTCTA 59.538 55.000 16.69 0.00 40.17 2.10
2319 2505 1.220206 CTGCGAGCAGGGTCATTCT 59.780 57.895 16.69 0.00 40.17 2.40
2320 2506 0.179062 ATCTGCGAGCAGGGTCATTC 60.179 55.000 22.93 0.00 43.75 2.67
2321 2507 0.179062 GATCTGCGAGCAGGGTCATT 60.179 55.000 22.93 3.83 43.75 2.57
2322 2508 1.332889 TGATCTGCGAGCAGGGTCAT 61.333 55.000 22.93 10.47 43.75 3.06
2323 2509 1.332889 ATGATCTGCGAGCAGGGTCA 61.333 55.000 24.56 24.56 43.75 4.02
2324 2510 0.676184 TATGATCTGCGAGCAGGGTC 59.324 55.000 22.93 20.01 43.75 4.46
2325 2511 1.346062 ATATGATCTGCGAGCAGGGT 58.654 50.000 22.93 13.21 43.75 4.34
2326 2512 2.469274 AATATGATCTGCGAGCAGGG 57.531 50.000 22.93 1.69 43.75 4.45
2327 2513 3.257393 GGTAATATGATCTGCGAGCAGG 58.743 50.000 22.93 6.71 43.75 4.85
2328 2514 3.257393 GGGTAATATGATCTGCGAGCAG 58.743 50.000 18.20 18.20 44.86 4.24
2329 2515 2.632512 TGGGTAATATGATCTGCGAGCA 59.367 45.455 0.00 0.00 30.86 4.26
2330 2516 2.996621 GTGGGTAATATGATCTGCGAGC 59.003 50.000 0.00 0.00 0.00 5.03
2331 2517 3.589988 GGTGGGTAATATGATCTGCGAG 58.410 50.000 0.00 0.00 0.00 5.03
2332 2518 2.301870 GGGTGGGTAATATGATCTGCGA 59.698 50.000 0.00 0.00 0.00 5.10
2333 2519 2.615493 GGGGTGGGTAATATGATCTGCG 60.615 54.545 0.00 0.00 0.00 5.18
2334 2520 2.375174 TGGGGTGGGTAATATGATCTGC 59.625 50.000 0.00 0.00 0.00 4.26
2335 2521 4.398319 GTTGGGGTGGGTAATATGATCTG 58.602 47.826 0.00 0.00 0.00 2.90
2340 2526 3.390175 TTGGTTGGGGTGGGTAATATG 57.610 47.619 0.00 0.00 0.00 1.78
2342 2528 2.092321 CGATTGGTTGGGGTGGGTAATA 60.092 50.000 0.00 0.00 0.00 0.98
2343 2529 1.341581 CGATTGGTTGGGGTGGGTAAT 60.342 52.381 0.00 0.00 0.00 1.89
2345 2531 1.686416 CGATTGGTTGGGGTGGGTA 59.314 57.895 0.00 0.00 0.00 3.69
2346 2532 2.438795 CGATTGGTTGGGGTGGGT 59.561 61.111 0.00 0.00 0.00 4.51
2350 2536 2.781431 GAAGGCCGATTGGTTGGGGT 62.781 60.000 0.00 0.00 37.67 4.95
2352 2538 0.684153 ATGAAGGCCGATTGGTTGGG 60.684 55.000 0.00 0.00 37.67 4.12
2354 2540 0.740737 GGATGAAGGCCGATTGGTTG 59.259 55.000 0.00 0.00 37.67 3.77
2366 2552 6.815641 CCAGAATATATCGACCTTGGATGAAG 59.184 42.308 0.00 0.00 0.00 3.02
2368 2554 6.016555 TCCAGAATATATCGACCTTGGATGA 58.983 40.000 0.00 0.00 0.00 2.92
2369 2555 6.286240 TCCAGAATATATCGACCTTGGATG 57.714 41.667 0.00 0.00 0.00 3.51
2371 2557 5.187772 CCATCCAGAATATATCGACCTTGGA 59.812 44.000 0.00 0.00 0.00 3.53
2372 2558 5.423015 CCATCCAGAATATATCGACCTTGG 58.577 45.833 0.00 0.00 0.00 3.61
2373 2559 5.423015 CCCATCCAGAATATATCGACCTTG 58.577 45.833 0.00 0.00 0.00 3.61
2374 2560 4.471386 CCCCATCCAGAATATATCGACCTT 59.529 45.833 0.00 0.00 0.00 3.50
2375 2561 4.033709 CCCCATCCAGAATATATCGACCT 58.966 47.826 0.00 0.00 0.00 3.85
2376 2562 3.775316 ACCCCATCCAGAATATATCGACC 59.225 47.826 0.00 0.00 0.00 4.79
2377 2563 4.759782 CACCCCATCCAGAATATATCGAC 58.240 47.826 0.00 0.00 0.00 4.20
2378 2564 3.197766 GCACCCCATCCAGAATATATCGA 59.802 47.826 0.00 0.00 0.00 3.59
2380 2566 4.851639 AGCACCCCATCCAGAATATATC 57.148 45.455 0.00 0.00 0.00 1.63
2381 2567 5.353986 ACTAGCACCCCATCCAGAATATAT 58.646 41.667 0.00 0.00 0.00 0.86
2382 2568 4.763355 ACTAGCACCCCATCCAGAATATA 58.237 43.478 0.00 0.00 0.00 0.86
2383 2569 3.584848 GACTAGCACCCCATCCAGAATAT 59.415 47.826 0.00 0.00 0.00 1.28
2384 2570 2.972713 GACTAGCACCCCATCCAGAATA 59.027 50.000 0.00 0.00 0.00 1.75
2385 2571 1.771255 GACTAGCACCCCATCCAGAAT 59.229 52.381 0.00 0.00 0.00 2.40
2387 2573 0.691078 GGACTAGCACCCCATCCAGA 60.691 60.000 0.00 0.00 0.00 3.86
2388 2574 0.692419 AGGACTAGCACCCCATCCAG 60.692 60.000 3.36 0.00 31.41 3.86
2389 2575 0.253160 AAGGACTAGCACCCCATCCA 60.253 55.000 3.36 0.00 31.41 3.41
2390 2576 0.470341 GAAGGACTAGCACCCCATCC 59.530 60.000 3.36 0.00 0.00 3.51
2392 2578 1.492176 CATGAAGGACTAGCACCCCAT 59.508 52.381 3.36 5.11 0.00 4.00
2393 2579 0.911769 CATGAAGGACTAGCACCCCA 59.088 55.000 3.36 3.29 0.00 4.96
2394 2580 1.204146 TCATGAAGGACTAGCACCCC 58.796 55.000 0.00 0.00 0.00 4.95
2395 2581 2.237392 ACTTCATGAAGGACTAGCACCC 59.763 50.000 33.11 0.00 42.53 4.61
2397 2583 3.196685 AGGACTTCATGAAGGACTAGCAC 59.803 47.826 33.11 16.34 42.53 4.40
2398 2584 3.445008 AGGACTTCATGAAGGACTAGCA 58.555 45.455 33.11 0.00 42.53 3.49
2399 2585 3.181470 GGAGGACTTCATGAAGGACTAGC 60.181 52.174 33.11 20.01 42.53 3.42
2400 2586 4.026744 TGGAGGACTTCATGAAGGACTAG 58.973 47.826 33.11 13.50 42.53 2.57
2403 2589 3.198635 TCATGGAGGACTTCATGAAGGAC 59.801 47.826 33.11 25.45 44.41 3.85
2404 2590 3.453717 CTCATGGAGGACTTCATGAAGGA 59.546 47.826 33.11 19.27 45.94 3.36
2405 2591 3.806380 CTCATGGAGGACTTCATGAAGG 58.194 50.000 33.11 18.52 45.94 3.46
2418 2604 1.617018 TTGGAGCGGACCTCATGGAG 61.617 60.000 0.00 0.00 42.62 3.86
2419 2605 1.198094 TTTGGAGCGGACCTCATGGA 61.198 55.000 0.00 0.00 42.62 3.41
2420 2606 1.026718 GTTTGGAGCGGACCTCATGG 61.027 60.000 0.00 0.00 42.62 3.66
2421 2607 0.321564 TGTTTGGAGCGGACCTCATG 60.322 55.000 0.00 0.00 42.62 3.07
2422 2608 0.321653 GTGTTTGGAGCGGACCTCAT 60.322 55.000 0.00 0.00 42.62 2.90
2423 2609 1.070786 GTGTTTGGAGCGGACCTCA 59.929 57.895 0.00 0.00 42.62 3.86
2424 2610 1.671379 GGTGTTTGGAGCGGACCTC 60.671 63.158 0.00 0.00 39.98 3.85
2425 2611 2.113243 GAGGTGTTTGGAGCGGACCT 62.113 60.000 0.00 0.00 39.83 3.85
2426 2612 1.671379 GAGGTGTTTGGAGCGGACC 60.671 63.158 0.00 0.00 0.00 4.46
2427 2613 0.534203 TTGAGGTGTTTGGAGCGGAC 60.534 55.000 0.00 0.00 0.00 4.79
2428 2614 0.250295 CTTGAGGTGTTTGGAGCGGA 60.250 55.000 0.00 0.00 0.00 5.54
2429 2615 1.237285 CCTTGAGGTGTTTGGAGCGG 61.237 60.000 0.00 0.00 0.00 5.52
2430 2616 1.856265 GCCTTGAGGTGTTTGGAGCG 61.856 60.000 0.00 0.00 37.57 5.03
2431 2617 1.856265 CGCCTTGAGGTGTTTGGAGC 61.856 60.000 2.39 0.00 40.69 4.70
2433 2619 1.228124 CCGCCTTGAGGTGTTTGGA 60.228 57.895 9.56 0.00 43.97 3.53
2434 2620 1.515521 GACCGCCTTGAGGTGTTTGG 61.516 60.000 9.56 2.33 43.01 3.28
2435 2621 0.535102 AGACCGCCTTGAGGTGTTTG 60.535 55.000 9.56 0.00 43.01 2.93
2438 2624 0.182775 AAAAGACCGCCTTGAGGTGT 59.817 50.000 9.56 2.42 43.01 4.16
2439 2625 1.001378 CAAAAAGACCGCCTTGAGGTG 60.001 52.381 3.58 3.58 43.01 4.00
2440 2626 1.133915 TCAAAAAGACCGCCTTGAGGT 60.134 47.619 0.00 0.00 46.16 3.85
2442 2628 2.878406 TCTTCAAAAAGACCGCCTTGAG 59.122 45.455 0.00 0.00 36.59 3.02
2443 2629 2.925724 TCTTCAAAAAGACCGCCTTGA 58.074 42.857 0.00 0.00 36.59 3.02
2445 2631 2.484264 CGATCTTCAAAAAGACCGCCTT 59.516 45.455 0.00 0.00 41.44 4.35
2447 2633 2.073816 TCGATCTTCAAAAAGACCGCC 58.926 47.619 0.00 0.00 46.34 6.13
2448 2634 4.342352 AATCGATCTTCAAAAAGACCGC 57.658 40.909 0.00 0.00 46.34 5.68
2450 2636 6.254281 TGGAAATCGATCTTCAAAAAGACC 57.746 37.500 16.70 0.00 44.13 3.85
2451 2637 9.495754 CTTATGGAAATCGATCTTCAAAAAGAC 57.504 33.333 16.70 4.40 44.13 3.01
2453 2639 7.433425 GCCTTATGGAAATCGATCTTCAAAAAG 59.567 37.037 16.70 9.33 34.57 2.27
2454 2640 7.257722 GCCTTATGGAAATCGATCTTCAAAAA 58.742 34.615 16.70 1.92 34.57 1.94
2456 2642 5.299279 GGCCTTATGGAAATCGATCTTCAAA 59.701 40.000 16.70 8.76 34.57 2.69
2460 3615 4.713792 AGGCCTTATGGAAATCGATCTT 57.286 40.909 0.00 0.00 34.57 2.40
2461 3616 5.485353 TCATAGGCCTTATGGAAATCGATCT 59.515 40.000 12.58 0.00 39.73 2.75
2462 3617 5.582665 GTCATAGGCCTTATGGAAATCGATC 59.417 44.000 12.58 0.00 39.73 3.69
2465 3620 4.452455 GTGTCATAGGCCTTATGGAAATCG 59.548 45.833 12.58 0.00 39.73 3.34
2466 3621 5.471456 CAGTGTCATAGGCCTTATGGAAATC 59.529 44.000 12.58 3.86 39.73 2.17
2467 3622 5.103940 ACAGTGTCATAGGCCTTATGGAAAT 60.104 40.000 12.58 0.00 39.73 2.17
2469 3624 3.780294 ACAGTGTCATAGGCCTTATGGAA 59.220 43.478 12.58 0.00 39.73 3.53
2471 3626 3.845781 ACAGTGTCATAGGCCTTATGG 57.154 47.619 12.58 0.00 39.73 2.74
2473 3628 4.656112 AGCTAACAGTGTCATAGGCCTTAT 59.344 41.667 12.58 0.00 0.00 1.73
2477 3632 2.555199 CAGCTAACAGTGTCATAGGCC 58.445 52.381 0.00 0.00 0.00 5.19
2478 3633 2.555199 CCAGCTAACAGTGTCATAGGC 58.445 52.381 0.00 0.00 0.00 3.93
2479 3634 2.555199 GCCAGCTAACAGTGTCATAGG 58.445 52.381 0.00 0.00 0.00 2.57
2480 3635 2.555199 GGCCAGCTAACAGTGTCATAG 58.445 52.381 0.00 0.00 0.00 2.23
2485 3640 0.036875 GAAGGGCCAGCTAACAGTGT 59.963 55.000 6.18 0.00 0.00 3.55
2488 3643 4.645809 GGAAGGGCCAGCTAACAG 57.354 61.111 6.18 0.00 36.34 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.