Multiple sequence alignment - TraesCS1B01G448600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G448600 chr1B 100.000 2759 0 0 1 2759 667748720 667751478 0.000000e+00 5096.0
1 TraesCS1B01G448600 chr1B 96.411 613 22 0 1 613 640462283 640461671 0.000000e+00 1011.0
2 TraesCS1B01G448600 chr1B 96.085 613 23 1 1 613 62412905 62412294 0.000000e+00 998.0
3 TraesCS1B01G448600 chr1B 95.862 145 6 0 2547 2691 594034809 594034953 4.590000e-58 235.0
4 TraesCS1B01G448600 chr1D 87.049 1413 101 40 758 2135 479540033 479541398 0.000000e+00 1520.0
5 TraesCS1B01G448600 chr1D 81.624 234 26 11 2317 2549 479541609 479541826 7.850000e-41 178.0
6 TraesCS1B01G448600 chr1A 85.617 1175 70 34 788 1926 575807560 575808671 0.000000e+00 1142.0
7 TraesCS1B01G448600 chr1A 78.070 114 13 7 2341 2454 575814876 575814977 8.250000e-06 62.1
8 TraesCS1B01G448600 chr7B 97.064 613 18 0 1 613 439998212 439997600 0.000000e+00 1033.0
9 TraesCS1B01G448600 chr7B 96.248 613 23 0 1 613 192453341 192453953 0.000000e+00 1005.0
10 TraesCS1B01G448600 chr7B 96.248 613 22 1 1 613 693860524 693861135 0.000000e+00 1003.0
11 TraesCS1B01G448600 chr2B 96.737 613 20 0 1 613 548392949 548392337 0.000000e+00 1022.0
12 TraesCS1B01G448600 chr6B 96.574 613 21 0 1 613 520867426 520868038 0.000000e+00 1016.0
13 TraesCS1B01G448600 chr6B 96.574 613 20 1 1 613 469775880 469775269 0.000000e+00 1014.0
14 TraesCS1B01G448600 chr6B 93.377 151 10 0 2545 2695 687318342 687318192 9.940000e-55 224.0
15 TraesCS1B01G448600 chr5B 96.260 615 22 1 1 614 427283505 427282891 0.000000e+00 1007.0
16 TraesCS1B01G448600 chr3B 94.771 153 7 1 2540 2691 724686233 724686081 1.280000e-58 237.0
17 TraesCS1B01G448600 chr3B 94.558 147 8 0 2545 2691 447291676 447291530 7.690000e-56 228.0
18 TraesCS1B01G448600 chr3B 85.143 175 24 2 1528 1701 416135498 416135325 7.850000e-41 178.0
19 TraesCS1B01G448600 chr5D 95.833 144 6 0 2547 2690 505463711 505463854 1.650000e-57 233.0
20 TraesCS1B01G448600 chr3A 95.238 147 7 0 2543 2689 600784951 600785097 1.650000e-57 233.0
21 TraesCS1B01G448600 chr3A 95.238 147 7 0 2543 2689 600821058 600821204 1.650000e-57 233.0
22 TraesCS1B01G448600 chr3A 95.205 146 7 0 2544 2689 9735553 9735408 5.940000e-57 231.0
23 TraesCS1B01G448600 chr3A 85.955 178 23 2 1525 1701 423672114 423672290 3.630000e-44 189.0
24 TraesCS1B01G448600 chr6A 95.172 145 7 0 2547 2691 196832790 196832646 2.140000e-56 230.0
25 TraesCS1B01G448600 chr3D 85.632 174 25 0 1528 1701 305622627 305622800 1.690000e-42 183.0
26 TraesCS1B01G448600 chr5A 80.925 173 31 2 1531 1702 459775648 459775477 4.790000e-28 135.0
27 TraesCS1B01G448600 chr4D 78.488 172 37 0 1531 1702 61852304 61852475 2.250000e-21 113.0
28 TraesCS1B01G448600 chr4A 77.907 172 38 0 1531 1702 535035694 535035865 1.040000e-19 108.0
29 TraesCS1B01G448600 chr4B 76.571 175 41 0 1531 1705 90892347 90892173 2.260000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G448600 chr1B 667748720 667751478 2758 False 5096 5096 100.0000 1 2759 1 chr1B.!!$F2 2758
1 TraesCS1B01G448600 chr1B 640461671 640462283 612 True 1011 1011 96.4110 1 613 1 chr1B.!!$R2 612
2 TraesCS1B01G448600 chr1B 62412294 62412905 611 True 998 998 96.0850 1 613 1 chr1B.!!$R1 612
3 TraesCS1B01G448600 chr1D 479540033 479541826 1793 False 849 1520 84.3365 758 2549 2 chr1D.!!$F1 1791
4 TraesCS1B01G448600 chr1A 575807560 575808671 1111 False 1142 1142 85.6170 788 1926 1 chr1A.!!$F1 1138
5 TraesCS1B01G448600 chr7B 439997600 439998212 612 True 1033 1033 97.0640 1 613 1 chr7B.!!$R1 612
6 TraesCS1B01G448600 chr7B 192453341 192453953 612 False 1005 1005 96.2480 1 613 1 chr7B.!!$F1 612
7 TraesCS1B01G448600 chr7B 693860524 693861135 611 False 1003 1003 96.2480 1 613 1 chr7B.!!$F2 612
8 TraesCS1B01G448600 chr2B 548392337 548392949 612 True 1022 1022 96.7370 1 613 1 chr2B.!!$R1 612
9 TraesCS1B01G448600 chr6B 520867426 520868038 612 False 1016 1016 96.5740 1 613 1 chr6B.!!$F1 612
10 TraesCS1B01G448600 chr6B 469775269 469775880 611 True 1014 1014 96.5740 1 613 1 chr6B.!!$R1 612
11 TraesCS1B01G448600 chr5B 427282891 427283505 614 True 1007 1007 96.2600 1 614 1 chr5B.!!$R1 613

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
709 710 0.174845 TGCACATGCTCGTAGTACCC 59.825 55.0 5.31 0.0 42.66 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1765 1798 0.03601 ATCAAGTCGCTTGTCCCCTG 60.036 55.0 15.83 0.0 41.66 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 4.831307 CCGAGTTCGACGAGCGGG 62.831 72.222 20.99 15.72 43.02 6.13
362 363 3.390521 TGCGAGAAGTGGGCGGAT 61.391 61.111 0.00 0.00 0.00 4.18
466 467 3.465871 GCAACAAATTGGCAAAGAAGGA 58.534 40.909 3.01 0.00 36.23 3.36
471 472 6.178607 ACAAATTGGCAAAGAAGGAGAAAT 57.821 33.333 3.01 0.00 0.00 2.17
560 561 1.421382 CCGTCCTACGCGAAGAAAAA 58.579 50.000 15.93 0.00 40.91 1.94
613 614 3.257561 CGCCATCAAGCTCGACCG 61.258 66.667 0.00 0.00 0.00 4.79
615 616 2.892640 CCATCAAGCTCGACCGGA 59.107 61.111 9.46 0.00 0.00 5.14
616 617 1.443407 CCATCAAGCTCGACCGGAT 59.557 57.895 9.46 0.00 0.00 4.18
617 618 0.598680 CCATCAAGCTCGACCGGATC 60.599 60.000 9.46 0.32 0.00 3.36
627 628 3.564455 GACCGGATCGAACGCTAAT 57.436 52.632 9.46 0.00 0.00 1.73
628 629 1.129326 GACCGGATCGAACGCTAATG 58.871 55.000 9.46 0.00 0.00 1.90
629 630 0.742505 ACCGGATCGAACGCTAATGA 59.257 50.000 9.46 0.00 0.00 2.57
630 631 1.135527 ACCGGATCGAACGCTAATGAA 59.864 47.619 9.46 0.00 0.00 2.57
631 632 1.787155 CCGGATCGAACGCTAATGAAG 59.213 52.381 0.00 0.00 0.00 3.02
632 633 2.543031 CCGGATCGAACGCTAATGAAGA 60.543 50.000 0.00 0.00 0.00 2.87
633 634 2.721603 CGGATCGAACGCTAATGAAGAG 59.278 50.000 0.00 0.00 0.00 2.85
634 635 2.473235 GGATCGAACGCTAATGAAGAGC 59.527 50.000 0.00 0.00 36.54 4.09
635 636 2.647529 TCGAACGCTAATGAAGAGCA 57.352 45.000 0.00 0.00 40.09 4.26
636 637 3.165058 TCGAACGCTAATGAAGAGCAT 57.835 42.857 0.00 0.00 40.09 3.79
637 638 2.860136 TCGAACGCTAATGAAGAGCATG 59.140 45.455 0.00 0.00 40.09 4.06
638 639 2.604914 CGAACGCTAATGAAGAGCATGT 59.395 45.455 0.00 0.00 40.09 3.21
639 640 3.542875 CGAACGCTAATGAAGAGCATGTG 60.543 47.826 0.00 0.00 40.09 3.21
640 641 2.283298 ACGCTAATGAAGAGCATGTGG 58.717 47.619 0.00 0.00 40.09 4.17
641 642 1.600957 CGCTAATGAAGAGCATGTGGG 59.399 52.381 0.00 0.00 40.09 4.61
642 643 1.952296 GCTAATGAAGAGCATGTGGGG 59.048 52.381 0.00 0.00 39.84 4.96
643 644 2.579873 CTAATGAAGAGCATGTGGGGG 58.420 52.381 0.00 0.00 37.28 5.40
658 659 4.452733 GGGGCCGAACGTCTGGAG 62.453 72.222 10.02 0.00 0.00 3.86
659 660 3.379445 GGGCCGAACGTCTGGAGA 61.379 66.667 10.02 0.00 0.00 3.71
660 661 2.722201 GGGCCGAACGTCTGGAGAT 61.722 63.158 10.02 0.00 0.00 2.75
661 662 1.519455 GGCCGAACGTCTGGAGATG 60.519 63.158 10.02 0.00 37.11 2.90
662 663 2.167861 GCCGAACGTCTGGAGATGC 61.168 63.158 10.02 0.00 34.50 3.91
663 664 1.519455 CCGAACGTCTGGAGATGCC 60.519 63.158 0.00 0.00 34.50 4.40
664 665 1.874019 CGAACGTCTGGAGATGCCG 60.874 63.158 0.00 0.00 40.66 5.69
665 666 1.215647 GAACGTCTGGAGATGCCGT 59.784 57.895 0.00 0.00 40.66 5.68
666 667 0.389948 GAACGTCTGGAGATGCCGTT 60.390 55.000 3.89 3.89 43.61 4.44
667 668 0.892755 AACGTCTGGAGATGCCGTTA 59.107 50.000 0.00 0.00 39.67 3.18
668 669 0.892755 ACGTCTGGAGATGCCGTTAA 59.107 50.000 0.00 0.00 40.66 2.01
669 670 1.278238 CGTCTGGAGATGCCGTTAAC 58.722 55.000 0.00 0.00 40.66 2.01
670 671 1.653151 GTCTGGAGATGCCGTTAACC 58.347 55.000 0.00 0.00 40.66 2.85
671 672 1.207329 GTCTGGAGATGCCGTTAACCT 59.793 52.381 0.00 0.00 40.66 3.50
672 673 1.906574 TCTGGAGATGCCGTTAACCTT 59.093 47.619 0.00 0.00 40.66 3.50
673 674 2.093658 TCTGGAGATGCCGTTAACCTTC 60.094 50.000 0.00 0.00 40.66 3.46
674 675 1.906574 TGGAGATGCCGTTAACCTTCT 59.093 47.619 0.00 0.41 40.66 2.85
675 676 3.101437 TGGAGATGCCGTTAACCTTCTA 58.899 45.455 0.00 0.00 40.66 2.10
676 677 3.709653 TGGAGATGCCGTTAACCTTCTAT 59.290 43.478 0.00 0.00 40.66 1.98
677 678 4.163458 TGGAGATGCCGTTAACCTTCTATT 59.837 41.667 0.00 0.00 40.66 1.73
678 679 5.123936 GGAGATGCCGTTAACCTTCTATTT 58.876 41.667 0.00 0.00 0.00 1.40
679 680 5.589050 GGAGATGCCGTTAACCTTCTATTTT 59.411 40.000 0.00 0.00 0.00 1.82
680 681 6.095021 GGAGATGCCGTTAACCTTCTATTTTT 59.905 38.462 0.00 0.00 0.00 1.94
681 682 7.281549 GGAGATGCCGTTAACCTTCTATTTTTA 59.718 37.037 0.00 0.00 0.00 1.52
682 683 7.982224 AGATGCCGTTAACCTTCTATTTTTAC 58.018 34.615 0.00 0.00 0.00 2.01
683 684 6.168164 TGCCGTTAACCTTCTATTTTTACG 57.832 37.500 0.00 0.00 0.00 3.18
684 685 5.122082 TGCCGTTAACCTTCTATTTTTACGG 59.878 40.000 0.00 0.00 38.68 4.02
685 686 5.351189 GCCGTTAACCTTCTATTTTTACGGA 59.649 40.000 13.54 0.00 38.00 4.69
686 687 6.128309 GCCGTTAACCTTCTATTTTTACGGAA 60.128 38.462 13.54 0.00 38.00 4.30
687 688 7.414429 GCCGTTAACCTTCTATTTTTACGGAAT 60.414 37.037 13.54 0.00 38.00 3.01
688 689 7.906527 CCGTTAACCTTCTATTTTTACGGAATG 59.093 37.037 0.00 0.00 38.00 2.67
689 690 8.445493 CGTTAACCTTCTATTTTTACGGAATGT 58.555 33.333 0.00 0.00 0.00 2.71
692 693 6.617879 ACCTTCTATTTTTACGGAATGTTGC 58.382 36.000 0.00 0.00 0.00 4.17
693 694 6.207810 ACCTTCTATTTTTACGGAATGTTGCA 59.792 34.615 0.00 0.00 0.00 4.08
694 695 6.526674 CCTTCTATTTTTACGGAATGTTGCAC 59.473 38.462 0.00 0.00 0.00 4.57
695 696 6.561737 TCTATTTTTACGGAATGTTGCACA 57.438 33.333 0.00 0.00 0.00 4.57
696 697 7.151999 TCTATTTTTACGGAATGTTGCACAT 57.848 32.000 0.00 0.00 41.31 3.21
697 698 7.026562 TCTATTTTTACGGAATGTTGCACATG 58.973 34.615 3.08 0.00 37.97 3.21
698 699 2.627863 TTACGGAATGTTGCACATGC 57.372 45.000 0.00 0.00 37.97 4.06
699 700 1.819928 TACGGAATGTTGCACATGCT 58.180 45.000 5.31 0.00 37.97 3.79
700 701 0.523072 ACGGAATGTTGCACATGCTC 59.477 50.000 5.31 0.00 37.97 4.26
701 702 0.521867 CGGAATGTTGCACATGCTCG 60.522 55.000 5.31 5.84 37.97 5.03
702 703 0.523072 GGAATGTTGCACATGCTCGT 59.477 50.000 5.31 0.00 37.97 4.18
703 704 1.737236 GGAATGTTGCACATGCTCGTA 59.263 47.619 5.31 0.00 37.97 3.43
704 705 2.223112 GGAATGTTGCACATGCTCGTAG 60.223 50.000 5.31 0.00 37.97 3.51
705 706 2.099141 ATGTTGCACATGCTCGTAGT 57.901 45.000 5.31 0.00 37.45 2.73
706 707 2.734276 TGTTGCACATGCTCGTAGTA 57.266 45.000 5.31 0.00 42.66 1.82
707 708 2.333926 TGTTGCACATGCTCGTAGTAC 58.666 47.619 5.31 0.00 42.66 2.73
708 709 1.659098 GTTGCACATGCTCGTAGTACC 59.341 52.381 5.31 0.00 42.66 3.34
709 710 0.174845 TGCACATGCTCGTAGTACCC 59.825 55.000 5.31 0.00 42.66 3.69
710 711 0.529992 GCACATGCTCGTAGTACCCC 60.530 60.000 0.00 0.00 38.21 4.95
711 712 0.248907 CACATGCTCGTAGTACCCCG 60.249 60.000 0.00 0.00 0.00 5.73
712 713 1.299926 CATGCTCGTAGTACCCCGC 60.300 63.158 0.00 0.00 0.00 6.13
713 714 1.455217 ATGCTCGTAGTACCCCGCT 60.455 57.895 0.00 0.00 0.00 5.52
714 715 1.735376 ATGCTCGTAGTACCCCGCTG 61.735 60.000 0.00 0.00 0.00 5.18
715 716 3.117372 CTCGTAGTACCCCGCTGG 58.883 66.667 0.00 0.00 41.37 4.85
731 732 2.150449 TGGTAAACCAGGCTCTGCA 58.850 52.632 0.00 0.00 42.01 4.41
732 733 0.250727 TGGTAAACCAGGCTCTGCAC 60.251 55.000 0.00 0.00 42.01 4.57
733 734 1.298859 GGTAAACCAGGCTCTGCACG 61.299 60.000 0.00 0.00 35.64 5.34
734 735 0.602905 GTAAACCAGGCTCTGCACGT 60.603 55.000 0.00 0.00 0.00 4.49
735 736 0.602638 TAAACCAGGCTCTGCACGTG 60.603 55.000 12.28 12.28 0.00 4.49
736 737 3.832237 AACCAGGCTCTGCACGTGG 62.832 63.158 18.88 11.72 46.18 4.94
738 739 4.007644 CAGGCTCTGCACGTGGGA 62.008 66.667 18.88 0.00 0.00 4.37
739 740 4.008933 AGGCTCTGCACGTGGGAC 62.009 66.667 18.88 0.59 0.00 4.46
740 741 4.314440 GGCTCTGCACGTGGGACA 62.314 66.667 18.88 5.91 0.00 4.02
741 742 2.280797 GCTCTGCACGTGGGACAA 60.281 61.111 18.88 0.00 44.16 3.18
742 743 1.672356 GCTCTGCACGTGGGACAAT 60.672 57.895 18.88 0.00 44.16 2.71
743 744 1.237285 GCTCTGCACGTGGGACAATT 61.237 55.000 18.88 0.00 44.16 2.32
744 745 1.943968 GCTCTGCACGTGGGACAATTA 60.944 52.381 18.88 0.00 44.16 1.40
745 746 2.422597 CTCTGCACGTGGGACAATTAA 58.577 47.619 18.88 0.00 44.16 1.40
746 747 2.811431 CTCTGCACGTGGGACAATTAAA 59.189 45.455 18.88 0.00 44.16 1.52
747 748 2.811431 TCTGCACGTGGGACAATTAAAG 59.189 45.455 18.88 0.00 44.16 1.85
748 749 1.883275 TGCACGTGGGACAATTAAAGG 59.117 47.619 18.88 0.00 44.16 3.11
749 750 2.156098 GCACGTGGGACAATTAAAGGA 58.844 47.619 18.88 0.00 44.16 3.36
750 751 2.752903 GCACGTGGGACAATTAAAGGAT 59.247 45.455 18.88 0.00 44.16 3.24
751 752 3.942748 GCACGTGGGACAATTAAAGGATA 59.057 43.478 18.88 0.00 44.16 2.59
752 753 4.035208 GCACGTGGGACAATTAAAGGATAG 59.965 45.833 18.88 0.00 44.16 2.08
753 754 4.574828 CACGTGGGACAATTAAAGGATAGG 59.425 45.833 7.95 0.00 44.16 2.57
754 755 4.134563 CGTGGGACAATTAAAGGATAGGG 58.865 47.826 0.00 0.00 44.16 3.53
755 756 3.889538 GTGGGACAATTAAAGGATAGGGC 59.110 47.826 0.00 0.00 44.16 5.19
756 757 3.117284 TGGGACAATTAAAGGATAGGGCC 60.117 47.826 0.00 0.00 31.92 5.80
757 758 3.146847 GGACAATTAAAGGATAGGGCCG 58.853 50.000 0.00 0.00 0.00 6.13
758 759 3.146847 GACAATTAAAGGATAGGGCCGG 58.853 50.000 0.00 0.00 0.00 6.13
759 760 2.158519 ACAATTAAAGGATAGGGCCGGG 60.159 50.000 2.18 0.00 0.00 5.73
760 761 0.404426 ATTAAAGGATAGGGCCGGGC 59.596 55.000 22.00 22.00 0.00 6.13
761 762 0.696485 TTAAAGGATAGGGCCGGGCT 60.696 55.000 28.80 16.07 0.00 5.19
762 763 1.415672 TAAAGGATAGGGCCGGGCTG 61.416 60.000 28.80 0.00 0.00 4.85
765 766 3.631046 GATAGGGCCGGGCTGGAG 61.631 72.222 28.80 0.00 42.00 3.86
831 832 4.248842 CGCTCCACCACCACCACA 62.249 66.667 0.00 0.00 0.00 4.17
904 905 0.321122 CAGTGTCTCCCCTGCTGAAC 60.321 60.000 0.00 0.00 0.00 3.18
915 916 0.907486 CTGCTGAACCCCATCTCTCA 59.093 55.000 0.00 0.00 0.00 3.27
976 991 3.634072 CGCGCTAGCTGCATCCAC 61.634 66.667 24.19 2.38 43.06 4.02
1278 1305 3.330720 CACCCCCGCCTCTTCCTT 61.331 66.667 0.00 0.00 0.00 3.36
1407 1440 2.353573 GCGTACAACCCCCACCAT 59.646 61.111 0.00 0.00 0.00 3.55
1408 1441 1.303806 GCGTACAACCCCCACCATT 60.304 57.895 0.00 0.00 0.00 3.16
1614 1647 2.825836 GGGTGGCGGATGCTGAAG 60.826 66.667 0.00 0.00 42.25 3.02
1743 1776 1.228063 ACAGTCCCAACAGCAGCAG 60.228 57.895 0.00 0.00 0.00 4.24
1749 1782 1.007734 CCAACAGCAGCAGCAACAG 60.008 57.895 3.17 0.00 45.49 3.16
1752 1785 2.050351 CAGCAGCAGCAACAGCAC 60.050 61.111 3.17 0.00 45.49 4.40
1753 1786 3.292936 AGCAGCAGCAACAGCACC 61.293 61.111 3.17 0.00 45.49 5.01
1756 1789 2.191513 CAGCAGCAACAGCACCAGT 61.192 57.895 0.00 0.00 0.00 4.00
1757 1790 0.886043 CAGCAGCAACAGCACCAGTA 60.886 55.000 0.00 0.00 0.00 2.74
1758 1791 0.604780 AGCAGCAACAGCACCAGTAG 60.605 55.000 0.00 0.00 0.00 2.57
1759 1792 1.871772 CAGCAACAGCACCAGTAGC 59.128 57.895 0.00 0.00 0.00 3.58
1761 1794 1.600636 GCAACAGCACCAGTAGCCA 60.601 57.895 0.00 0.00 0.00 4.75
1762 1795 0.962356 GCAACAGCACCAGTAGCCAT 60.962 55.000 0.00 0.00 0.00 4.40
1764 1797 0.322816 AACAGCACCAGTAGCCATGG 60.323 55.000 7.63 7.63 43.87 3.66
1765 1798 2.117156 CAGCACCAGTAGCCATGGC 61.117 63.158 30.12 30.12 41.87 4.40
1766 1799 2.045045 GCACCAGTAGCCATGGCA 60.045 61.111 37.18 20.88 44.88 4.92
1767 1800 2.117156 GCACCAGTAGCCATGGCAG 61.117 63.158 37.18 22.66 44.88 4.85
1768 1801 1.452651 CACCAGTAGCCATGGCAGG 60.453 63.158 37.18 30.87 44.88 4.85
1769 1802 2.194056 CCAGTAGCCATGGCAGGG 59.806 66.667 37.18 26.43 44.88 4.45
1770 1803 2.194056 CAGTAGCCATGGCAGGGG 59.806 66.667 37.18 20.19 44.88 4.79
1771 1804 2.042762 AGTAGCCATGGCAGGGGA 59.957 61.111 37.18 14.71 44.88 4.81
1772 1805 2.193248 GTAGCCATGGCAGGGGAC 59.807 66.667 37.18 21.65 44.88 4.46
1773 1806 2.286045 TAGCCATGGCAGGGGACA 60.286 61.111 37.18 10.95 44.88 4.02
1774 1807 1.928046 TAGCCATGGCAGGGGACAA 60.928 57.895 37.18 9.88 44.88 3.18
1775 1808 1.925285 TAGCCATGGCAGGGGACAAG 61.925 60.000 37.18 0.00 44.88 3.16
1776 1809 2.757099 CCATGGCAGGGGACAAGC 60.757 66.667 11.07 0.00 34.11 4.01
1777 1810 3.136123 CATGGCAGGGGACAAGCG 61.136 66.667 0.00 0.00 34.11 4.68
1778 1811 3.329889 ATGGCAGGGGACAAGCGA 61.330 61.111 0.00 0.00 34.11 4.93
1779 1812 3.628646 ATGGCAGGGGACAAGCGAC 62.629 63.158 0.00 0.00 34.11 5.19
1780 1813 4.021925 GGCAGGGGACAAGCGACT 62.022 66.667 0.00 0.00 34.84 4.18
1781 1814 2.032681 GCAGGGGACAAGCGACTT 59.967 61.111 0.00 0.00 0.00 3.01
1782 1815 2.328099 GCAGGGGACAAGCGACTTG 61.328 63.158 15.16 15.16 45.85 3.16
1783 1816 1.371183 CAGGGGACAAGCGACTTGA 59.629 57.895 21.19 0.00 43.42 3.02
1784 1817 0.036010 CAGGGGACAAGCGACTTGAT 60.036 55.000 21.19 9.36 43.42 2.57
1785 1818 0.250513 AGGGGACAAGCGACTTGATC 59.749 55.000 21.19 15.17 43.42 2.92
1786 1819 0.250513 GGGGACAAGCGACTTGATCT 59.749 55.000 21.19 4.36 43.42 2.75
1787 1820 1.363744 GGGACAAGCGACTTGATCTG 58.636 55.000 21.19 1.52 43.42 2.90
1810 1843 1.277580 ATGGGAGGGGACAAGCTCAG 61.278 60.000 0.00 0.00 0.00 3.35
1844 1877 7.696453 CACATCATTATTTTTGTACTTCCGACC 59.304 37.037 0.00 0.00 0.00 4.79
1858 1891 2.499827 CGACCGGGGAAGAGGGATC 61.500 68.421 6.32 0.00 0.00 3.36
1860 1893 0.764752 GACCGGGGAAGAGGGATCAT 60.765 60.000 6.32 0.00 0.00 2.45
1861 1894 0.566176 ACCGGGGAAGAGGGATCATA 59.434 55.000 6.32 0.00 0.00 2.15
1863 1896 2.269940 CCGGGGAAGAGGGATCATATT 58.730 52.381 0.00 0.00 0.00 1.28
1973 2038 9.823647 TTTGTTTCTAGAGATAGATGATTGGTC 57.176 33.333 0.00 0.00 0.00 4.02
1974 2039 7.652727 TGTTTCTAGAGATAGATGATTGGTCG 58.347 38.462 0.00 0.00 0.00 4.79
1975 2040 6.825944 TTCTAGAGATAGATGATTGGTCGG 57.174 41.667 0.00 0.00 0.00 4.79
1976 2041 5.882040 TCTAGAGATAGATGATTGGTCGGT 58.118 41.667 0.00 0.00 0.00 4.69
1977 2042 6.307776 TCTAGAGATAGATGATTGGTCGGTT 58.692 40.000 0.00 0.00 0.00 4.44
1978 2043 7.459234 TCTAGAGATAGATGATTGGTCGGTTA 58.541 38.462 0.00 0.00 0.00 2.85
1979 2044 8.110271 TCTAGAGATAGATGATTGGTCGGTTAT 58.890 37.037 0.00 0.00 0.00 1.89
1980 2045 7.546250 AGAGATAGATGATTGGTCGGTTATT 57.454 36.000 0.00 0.00 0.00 1.40
1981 2046 7.382110 AGAGATAGATGATTGGTCGGTTATTG 58.618 38.462 0.00 0.00 0.00 1.90
1982 2047 7.233553 AGAGATAGATGATTGGTCGGTTATTGA 59.766 37.037 0.00 0.00 0.00 2.57
1983 2048 7.382110 AGATAGATGATTGGTCGGTTATTGAG 58.618 38.462 0.00 0.00 0.00 3.02
1984 2049 5.614324 AGATGATTGGTCGGTTATTGAGA 57.386 39.130 0.00 0.00 0.00 3.27
1985 2050 5.360591 AGATGATTGGTCGGTTATTGAGAC 58.639 41.667 0.00 0.00 0.00 3.36
1993 2058 4.817517 GTCGGTTATTGAGACCAAGAAGA 58.182 43.478 0.00 0.00 34.57 2.87
1994 2059 4.626172 GTCGGTTATTGAGACCAAGAAGAC 59.374 45.833 0.00 0.00 34.57 3.01
2005 2070 3.099905 ACCAAGAAGACGATGATGAGGA 58.900 45.455 0.00 0.00 0.00 3.71
2042 2107 6.183359 GCGTGCTTACATTTGTCCTTATTTTG 60.183 38.462 0.00 0.00 0.00 2.44
2044 2109 7.060633 CGTGCTTACATTTGTCCTTATTTTGTC 59.939 37.037 0.00 0.00 0.00 3.18
2045 2110 7.865385 GTGCTTACATTTGTCCTTATTTTGTCA 59.135 33.333 0.00 0.00 0.00 3.58
2063 2134 6.455360 TTGTCATATTTGATTTGGCCTCTC 57.545 37.500 3.32 0.00 33.56 3.20
2065 2136 5.951148 TGTCATATTTGATTTGGCCTCTCAA 59.049 36.000 3.32 7.70 33.56 3.02
2066 2137 6.127647 TGTCATATTTGATTTGGCCTCTCAAC 60.128 38.462 3.32 0.00 33.56 3.18
2071 2142 2.622942 TGATTTGGCCTCTCAACACAAC 59.377 45.455 3.32 0.00 0.00 3.32
2088 2159 4.889409 ACACAACAAGATCAATTGACCACT 59.111 37.500 11.07 7.95 34.20 4.00
2089 2160 5.009010 ACACAACAAGATCAATTGACCACTC 59.991 40.000 11.07 4.40 34.20 3.51
2101 2172 3.154827 TGACCACTCCAATTTCCTTCC 57.845 47.619 0.00 0.00 0.00 3.46
2113 2184 0.677731 TTCCTTCCTGCCATCTTGCG 60.678 55.000 0.00 0.00 0.00 4.85
2142 2230 6.577103 CCTAGATCTTTCATCTTGTGCTGTA 58.423 40.000 0.00 0.00 0.00 2.74
2150 2238 7.445096 TCTTTCATCTTGTGCTGTAATTTCTCA 59.555 33.333 0.00 0.00 0.00 3.27
2153 2241 7.386059 TCATCTTGTGCTGTAATTTCTCACTA 58.614 34.615 8.54 2.80 0.00 2.74
2154 2242 7.331934 TCATCTTGTGCTGTAATTTCTCACTAC 59.668 37.037 8.54 0.00 0.00 2.73
2157 2245 5.479306 TGTGCTGTAATTTCTCACTACTCC 58.521 41.667 8.54 0.00 0.00 3.85
2179 2267 5.008316 TCCTTCAAATGCAGAATCATCGATG 59.992 40.000 19.61 19.61 0.00 3.84
2180 2268 5.220989 CCTTCAAATGCAGAATCATCGATGT 60.221 40.000 24.09 6.77 0.00 3.06
2181 2269 5.164606 TCAAATGCAGAATCATCGATGTG 57.835 39.130 24.09 15.99 0.00 3.21
2186 2310 2.286294 GCAGAATCATCGATGTGGTCAC 59.714 50.000 24.09 12.16 0.00 3.67
2203 2327 2.410053 GTCACAGATTCAACGAGACAGC 59.590 50.000 0.00 0.00 0.00 4.40
2204 2328 2.035832 TCACAGATTCAACGAGACAGCA 59.964 45.455 0.00 0.00 0.00 4.41
2208 2332 5.292834 CACAGATTCAACGAGACAGCAATAT 59.707 40.000 0.00 0.00 0.00 1.28
2213 2337 4.176271 TCAACGAGACAGCAATATGACAG 58.824 43.478 0.00 0.00 0.00 3.51
2214 2338 3.876274 ACGAGACAGCAATATGACAGT 57.124 42.857 0.00 0.00 0.00 3.55
2216 2340 4.569943 ACGAGACAGCAATATGACAGTTT 58.430 39.130 0.00 0.00 0.00 2.66
2222 2346 8.654230 AGACAGCAATATGACAGTTTATGTAG 57.346 34.615 0.00 0.00 44.17 2.74
2231 2355 6.020971 TGACAGTTTATGTAGCTTTCTCGA 57.979 37.500 0.00 0.00 44.17 4.04
2238 2362 6.887376 TTATGTAGCTTTCTCGATGACAAC 57.113 37.500 0.00 0.00 0.00 3.32
2239 2363 4.251543 TGTAGCTTTCTCGATGACAACA 57.748 40.909 0.00 0.00 0.00 3.33
2240 2364 4.627058 TGTAGCTTTCTCGATGACAACAA 58.373 39.130 0.00 0.00 0.00 2.83
2241 2365 4.686091 TGTAGCTTTCTCGATGACAACAAG 59.314 41.667 0.00 0.00 0.00 3.16
2242 2366 3.995199 AGCTTTCTCGATGACAACAAGA 58.005 40.909 0.00 0.00 0.00 3.02
2243 2367 3.993081 AGCTTTCTCGATGACAACAAGAG 59.007 43.478 0.00 0.00 36.73 2.85
2244 2368 3.990469 GCTTTCTCGATGACAACAAGAGA 59.010 43.478 0.00 0.00 39.84 3.10
2245 2369 4.449068 GCTTTCTCGATGACAACAAGAGAA 59.551 41.667 13.20 13.20 44.07 2.87
2246 2370 5.613577 GCTTTCTCGATGACAACAAGAGAAC 60.614 44.000 15.32 7.04 44.68 3.01
2247 2371 4.584327 TCTCGATGACAACAAGAGAACA 57.416 40.909 0.00 0.00 39.22 3.18
2248 2372 4.944048 TCTCGATGACAACAAGAGAACAA 58.056 39.130 0.00 0.00 39.22 2.83
2250 2374 5.635280 TCTCGATGACAACAAGAGAACAATC 59.365 40.000 0.00 0.00 39.22 2.67
2256 2380 7.099266 TGACAACAAGAGAACAATCAACAAT 57.901 32.000 0.00 0.00 0.00 2.71
2257 2381 6.974048 TGACAACAAGAGAACAATCAACAATG 59.026 34.615 0.00 0.00 0.00 2.82
2259 2383 6.096705 ACAACAAGAGAACAATCAACAATGGA 59.903 34.615 0.00 0.00 0.00 3.41
2264 2388 5.586243 AGAGAACAATCAACAATGGATACGG 59.414 40.000 0.00 0.00 42.51 4.02
2272 2396 2.297701 ACAATGGATACGGGCATGAAC 58.702 47.619 0.00 0.00 42.51 3.18
2276 2400 1.134521 TGGATACGGGCATGAACTGAC 60.135 52.381 0.00 0.00 42.51 3.51
2285 2409 4.082787 CGGGCATGAACTGACTTTAACATT 60.083 41.667 0.00 0.00 31.35 2.71
2286 2410 5.163513 GGGCATGAACTGACTTTAACATTG 58.836 41.667 0.00 0.00 31.35 2.82
2287 2411 4.622740 GGCATGAACTGACTTTAACATTGC 59.377 41.667 0.00 0.00 0.00 3.56
2288 2412 5.464168 GCATGAACTGACTTTAACATTGCT 58.536 37.500 0.00 0.00 0.00 3.91
2291 2415 6.060028 TGAACTGACTTTAACATTGCTCAC 57.940 37.500 0.00 0.00 0.00 3.51
2306 2430 5.381174 TTGCTCACAATGTAGTAGTACGT 57.619 39.130 3.32 0.00 30.95 3.57
2307 2431 6.499234 TTGCTCACAATGTAGTAGTACGTA 57.501 37.500 2.83 0.00 30.95 3.57
2308 2432 5.872635 TGCTCACAATGTAGTAGTACGTAC 58.127 41.667 18.10 18.10 30.95 3.67
2309 2433 5.645067 TGCTCACAATGTAGTAGTACGTACT 59.355 40.000 29.62 29.62 44.69 2.73
2310 2434 5.964168 GCTCACAATGTAGTAGTACGTACTG 59.036 44.000 33.23 19.20 42.37 2.74
2311 2435 6.426980 TCACAATGTAGTAGTACGTACTGG 57.573 41.667 33.23 16.08 42.37 4.00
2312 2436 5.355071 TCACAATGTAGTAGTACGTACTGGG 59.645 44.000 33.23 18.43 42.37 4.45
2313 2437 5.355071 CACAATGTAGTAGTACGTACTGGGA 59.645 44.000 33.23 17.41 42.37 4.37
2314 2438 5.587844 ACAATGTAGTAGTACGTACTGGGAG 59.412 44.000 33.23 18.05 42.37 4.30
2315 2439 4.142609 TGTAGTAGTACGTACTGGGAGG 57.857 50.000 33.23 0.00 42.37 4.30
2328 2452 1.143684 CTGGGAGGTGGGAACATATGG 59.856 57.143 7.80 0.00 46.14 2.74
2334 2458 4.536765 GAGGTGGGAACATATGGTTGAAT 58.463 43.478 7.80 0.00 46.14 2.57
2338 2462 4.022603 TGGGAACATATGGTTGAATGTGG 58.977 43.478 7.80 0.00 40.63 4.17
2353 2477 6.964807 TGAATGTGGCTTAATTATCAGCAT 57.035 33.333 10.53 0.00 37.81 3.79
2357 2481 6.135290 TGTGGCTTAATTATCAGCATCAAC 57.865 37.500 10.53 4.79 37.81 3.18
2359 2483 6.183360 TGTGGCTTAATTATCAGCATCAACTG 60.183 38.462 10.53 0.00 37.81 3.16
2374 2498 3.338249 TCAACTGAACTTAGCTGCATCC 58.662 45.455 1.02 0.00 0.00 3.51
2376 2500 2.704572 ACTGAACTTAGCTGCATCCAC 58.295 47.619 1.02 0.00 0.00 4.02
2408 2532 1.068127 GAGTACTGTTCACCCGTGTGT 59.932 52.381 0.00 0.00 43.26 3.72
2410 2534 0.105224 TACTGTTCACCCGTGTGTGG 59.895 55.000 0.00 0.00 43.26 4.17
2411 2535 1.153249 CTGTTCACCCGTGTGTGGT 60.153 57.895 0.00 0.00 43.26 4.16
2412 2536 0.746563 CTGTTCACCCGTGTGTGGTT 60.747 55.000 0.00 0.00 43.26 3.67
2413 2537 0.540454 TGTTCACCCGTGTGTGGTTA 59.460 50.000 0.00 0.00 43.26 2.85
2414 2538 1.141254 TGTTCACCCGTGTGTGGTTAT 59.859 47.619 0.00 0.00 43.26 1.89
2415 2539 1.802365 GTTCACCCGTGTGTGGTTATC 59.198 52.381 0.00 0.00 43.26 1.75
2416 2540 1.049402 TCACCCGTGTGTGGTTATCA 58.951 50.000 0.00 0.00 43.26 2.15
2417 2541 1.153353 CACCCGTGTGTGGTTATCAC 58.847 55.000 0.00 0.00 46.23 3.06
2418 2542 1.053424 ACCCGTGTGTGGTTATCACT 58.947 50.000 0.00 0.00 46.20 3.41
2419 2543 1.418637 ACCCGTGTGTGGTTATCACTT 59.581 47.619 0.00 0.00 46.20 3.16
2433 2557 7.873505 GTGGTTATCACTTTATCTATCCTCCAC 59.126 40.741 0.00 0.00 42.86 4.02
2436 2560 8.861086 GTTATCACTTTATCTATCCTCCACTCA 58.139 37.037 0.00 0.00 0.00 3.41
2442 2566 2.820178 TCTATCCTCCACTCAGTTGCA 58.180 47.619 0.00 0.00 0.00 4.08
2444 2568 0.617413 ATCCTCCACTCAGTTGCAGG 59.383 55.000 0.00 0.00 0.00 4.85
2445 2569 0.764369 TCCTCCACTCAGTTGCAGGT 60.764 55.000 0.00 0.00 0.00 4.00
2446 2570 0.604780 CCTCCACTCAGTTGCAGGTG 60.605 60.000 0.00 0.00 0.00 4.00
2447 2571 1.227943 TCCACTCAGTTGCAGGTGC 60.228 57.895 0.00 0.00 42.50 5.01
2466 2590 5.127031 AGGTGCATTTTGTGTAAGACTTTGT 59.873 36.000 0.00 0.00 0.00 2.83
2467 2591 5.810074 GGTGCATTTTGTGTAAGACTTTGTT 59.190 36.000 0.00 0.00 0.00 2.83
2473 2597 9.013490 CATTTTGTGTAAGACTTTGTTGAAGAG 57.987 33.333 0.00 0.00 38.77 2.85
2474 2598 7.915293 TTTGTGTAAGACTTTGTTGAAGAGA 57.085 32.000 0.00 0.00 38.77 3.10
2475 2599 7.539712 TTGTGTAAGACTTTGTTGAAGAGAG 57.460 36.000 0.00 0.00 38.77 3.20
2476 2600 6.873997 TGTGTAAGACTTTGTTGAAGAGAGA 58.126 36.000 0.00 0.00 38.77 3.10
2479 2603 8.331742 GTGTAAGACTTTGTTGAAGAGAGAAAG 58.668 37.037 0.00 0.00 38.77 2.62
2482 2606 8.744568 AAGACTTTGTTGAAGAGAGAAAGAAT 57.255 30.769 0.00 0.00 38.77 2.40
2483 2607 8.152309 AGACTTTGTTGAAGAGAGAAAGAATG 57.848 34.615 0.00 0.00 38.77 2.67
2484 2608 6.733145 ACTTTGTTGAAGAGAGAAAGAATGC 58.267 36.000 0.00 0.00 38.77 3.56
2486 2610 6.889301 TTGTTGAAGAGAGAAAGAATGCAT 57.111 33.333 0.00 0.00 0.00 3.96
2487 2611 6.492007 TGTTGAAGAGAGAAAGAATGCATC 57.508 37.500 0.00 0.00 0.00 3.91
2490 2614 4.628766 TGAAGAGAGAAAGAATGCATCACG 59.371 41.667 0.00 0.00 0.00 4.35
2491 2615 4.199432 AGAGAGAAAGAATGCATCACGT 57.801 40.909 0.00 0.00 0.00 4.49
2492 2616 4.573900 AGAGAGAAAGAATGCATCACGTT 58.426 39.130 0.00 2.10 0.00 3.99
2493 2617 4.629200 AGAGAGAAAGAATGCATCACGTTC 59.371 41.667 17.59 17.59 43.52 3.95
2504 2628 8.481132 GAATGCATCACGTTCTGAATTATTAC 57.519 34.615 0.00 0.00 40.56 1.89
2505 2629 7.792374 ATGCATCACGTTCTGAATTATTACT 57.208 32.000 0.00 0.00 30.60 2.24
2506 2630 7.003939 TGCATCACGTTCTGAATTATTACTG 57.996 36.000 0.00 0.00 30.60 2.74
2511 2635 6.816640 TCACGTTCTGAATTATTACTGGGAAG 59.183 38.462 0.00 0.00 0.00 3.46
2515 2639 7.767198 CGTTCTGAATTATTACTGGGAAGGTTA 59.233 37.037 0.00 0.00 0.00 2.85
2549 2673 6.064717 CCTTATCCAAACCAGATCCCTTAAG 58.935 44.000 0.00 0.00 0.00 1.85
2550 2674 4.526438 ATCCAAACCAGATCCCTTAAGG 57.474 45.455 15.14 15.14 0.00 2.69
2561 2685 3.644861 CCTTAAGGGCTTGTTCGGT 57.355 52.632 14.25 0.00 0.00 4.69
2562 2686 1.905637 CCTTAAGGGCTTGTTCGGTT 58.094 50.000 14.25 0.00 0.00 4.44
2563 2687 3.062122 CCTTAAGGGCTTGTTCGGTTA 57.938 47.619 14.25 0.00 0.00 2.85
2564 2688 3.414269 CCTTAAGGGCTTGTTCGGTTAA 58.586 45.455 14.25 0.00 0.00 2.01
2565 2689 4.014406 CCTTAAGGGCTTGTTCGGTTAAT 58.986 43.478 14.25 0.00 0.00 1.40
2566 2690 4.095932 CCTTAAGGGCTTGTTCGGTTAATC 59.904 45.833 14.25 0.00 0.00 1.75
2567 2691 2.124277 AGGGCTTGTTCGGTTAATCC 57.876 50.000 0.00 0.00 0.00 3.01
2568 2692 1.633945 AGGGCTTGTTCGGTTAATCCT 59.366 47.619 0.00 0.00 0.00 3.24
2569 2693 2.014857 GGGCTTGTTCGGTTAATCCTC 58.985 52.381 0.00 0.00 0.00 3.71
2570 2694 2.355818 GGGCTTGTTCGGTTAATCCTCT 60.356 50.000 0.00 0.00 0.00 3.69
2571 2695 2.937149 GGCTTGTTCGGTTAATCCTCTC 59.063 50.000 0.00 0.00 0.00 3.20
2572 2696 2.937149 GCTTGTTCGGTTAATCCTCTCC 59.063 50.000 0.00 0.00 0.00 3.71
2573 2697 3.532542 CTTGTTCGGTTAATCCTCTCCC 58.467 50.000 0.00 0.00 0.00 4.30
2574 2698 1.835531 TGTTCGGTTAATCCTCTCCCC 59.164 52.381 0.00 0.00 0.00 4.81
2575 2699 1.835531 GTTCGGTTAATCCTCTCCCCA 59.164 52.381 0.00 0.00 0.00 4.96
2576 2700 2.237893 GTTCGGTTAATCCTCTCCCCAA 59.762 50.000 0.00 0.00 0.00 4.12
2577 2701 2.116238 TCGGTTAATCCTCTCCCCAAG 58.884 52.381 0.00 0.00 0.00 3.61
2578 2702 2.116238 CGGTTAATCCTCTCCCCAAGA 58.884 52.381 0.00 0.00 0.00 3.02
2587 2711 3.557228 CTCTCCCCAAGAGGATTGAAG 57.443 52.381 0.00 0.00 46.73 3.02
2588 2712 2.172293 CTCTCCCCAAGAGGATTGAAGG 59.828 54.545 0.00 0.00 46.73 3.46
2589 2713 1.213926 CTCCCCAAGAGGATTGAAGGG 59.786 57.143 0.00 0.00 39.13 3.95
2590 2714 3.911719 CCCAAGAGGATTGAAGGGG 57.088 57.895 0.00 0.00 38.24 4.79
2591 2715 1.298953 CCCAAGAGGATTGAAGGGGA 58.701 55.000 0.00 0.00 38.24 4.81
2592 2716 1.855599 CCCAAGAGGATTGAAGGGGAT 59.144 52.381 0.00 0.00 38.24 3.85
2593 2717 2.245806 CCCAAGAGGATTGAAGGGGATT 59.754 50.000 0.00 0.00 38.24 3.01
2594 2718 3.294214 CCAAGAGGATTGAAGGGGATTG 58.706 50.000 0.00 0.00 36.89 2.67
2595 2719 3.053395 CCAAGAGGATTGAAGGGGATTGA 60.053 47.826 0.00 0.00 36.89 2.57
2596 2720 3.941704 AGAGGATTGAAGGGGATTGAC 57.058 47.619 0.00 0.00 0.00 3.18
2597 2721 3.192944 AGAGGATTGAAGGGGATTGACA 58.807 45.455 0.00 0.00 0.00 3.58
2598 2722 3.593328 AGAGGATTGAAGGGGATTGACAA 59.407 43.478 0.00 0.00 0.00 3.18
2599 2723 3.950395 GAGGATTGAAGGGGATTGACAAG 59.050 47.826 0.00 0.00 0.00 3.16
2600 2724 3.026694 GGATTGAAGGGGATTGACAAGG 58.973 50.000 0.00 0.00 0.00 3.61
2601 2725 3.309121 GGATTGAAGGGGATTGACAAGGA 60.309 47.826 0.00 0.00 0.00 3.36
2602 2726 4.540715 GATTGAAGGGGATTGACAAGGAT 58.459 43.478 0.00 0.00 0.00 3.24
2603 2727 4.402616 TTGAAGGGGATTGACAAGGATT 57.597 40.909 0.00 0.00 0.00 3.01
2622 2746 9.191995 CAAGGATTGGTTTGTATTTTGACTTAC 57.808 33.333 0.00 0.00 43.94 2.34
2623 2747 8.472007 AGGATTGGTTTGTATTTTGACTTACA 57.528 30.769 0.00 0.00 0.00 2.41
2624 2748 8.919145 AGGATTGGTTTGTATTTTGACTTACAA 58.081 29.630 0.00 0.00 36.73 2.41
2625 2749 9.191995 GGATTGGTTTGTATTTTGACTTACAAG 57.808 33.333 0.00 0.00 38.96 3.16
2626 2750 9.959749 GATTGGTTTGTATTTTGACTTACAAGA 57.040 29.630 0.00 0.00 38.96 3.02
2627 2751 9.965824 ATTGGTTTGTATTTTGACTTACAAGAG 57.034 29.630 0.00 0.00 38.96 2.85
2628 2752 8.740123 TGGTTTGTATTTTGACTTACAAGAGA 57.260 30.769 0.00 0.00 38.96 3.10
2629 2753 9.349713 TGGTTTGTATTTTGACTTACAAGAGAT 57.650 29.630 0.00 0.00 38.96 2.75
2639 2763 9.807921 TTTGACTTACAAGAGATTTAAATCCCT 57.192 29.630 21.86 14.60 39.77 4.20
2640 2764 9.449719 TTGACTTACAAGAGATTTAAATCCCTC 57.550 33.333 21.86 14.84 33.78 4.30
2641 2765 8.826765 TGACTTACAAGAGATTTAAATCCCTCT 58.173 33.333 21.86 16.59 36.04 3.69
2642 2766 9.320352 GACTTACAAGAGATTTAAATCCCTCTC 57.680 37.037 21.86 14.63 36.04 3.20
2643 2767 8.826765 ACTTACAAGAGATTTAAATCCCTCTCA 58.173 33.333 21.86 7.91 37.25 3.27
2644 2768 9.672673 CTTACAAGAGATTTAAATCCCTCTCAA 57.327 33.333 21.86 13.18 37.25 3.02
2646 2770 8.341892 ACAAGAGATTTAAATCCCTCTCAAAC 57.658 34.615 21.86 5.58 37.25 2.93
2647 2771 7.394641 ACAAGAGATTTAAATCCCTCTCAAACC 59.605 37.037 21.86 0.00 37.25 3.27
2648 2772 6.427441 AGAGATTTAAATCCCTCTCAAACCC 58.573 40.000 21.86 0.00 37.25 4.11
2649 2773 5.519808 AGATTTAAATCCCTCTCAAACCCC 58.480 41.667 21.86 0.00 36.04 4.95
2650 2774 5.256389 AGATTTAAATCCCTCTCAAACCCCT 59.744 40.000 21.86 0.00 36.04 4.79
2651 2775 5.348259 TTTAAATCCCTCTCAAACCCCTT 57.652 39.130 0.00 0.00 0.00 3.95
2652 2776 3.458044 AAATCCCTCTCAAACCCCTTC 57.542 47.619 0.00 0.00 0.00 3.46
2653 2777 2.059756 ATCCCTCTCAAACCCCTTCA 57.940 50.000 0.00 0.00 0.00 3.02
2654 2778 1.827792 TCCCTCTCAAACCCCTTCAA 58.172 50.000 0.00 0.00 0.00 2.69
2655 2779 2.358258 TCCCTCTCAAACCCCTTCAAT 58.642 47.619 0.00 0.00 0.00 2.57
2656 2780 2.308866 TCCCTCTCAAACCCCTTCAATC 59.691 50.000 0.00 0.00 0.00 2.67
2657 2781 2.621668 CCCTCTCAAACCCCTTCAATCC 60.622 54.545 0.00 0.00 0.00 3.01
2658 2782 2.041620 CCTCTCAAACCCCTTCAATCCA 59.958 50.000 0.00 0.00 0.00 3.41
2659 2783 3.084786 CTCTCAAACCCCTTCAATCCAC 58.915 50.000 0.00 0.00 0.00 4.02
2660 2784 2.716424 TCTCAAACCCCTTCAATCCACT 59.284 45.455 0.00 0.00 0.00 4.00
2661 2785 3.140144 TCTCAAACCCCTTCAATCCACTT 59.860 43.478 0.00 0.00 0.00 3.16
2662 2786 3.230134 TCAAACCCCTTCAATCCACTTG 58.770 45.455 0.00 0.00 36.09 3.16
2663 2787 2.299867 CAAACCCCTTCAATCCACTTGG 59.700 50.000 0.00 0.00 35.43 3.61
2672 2796 4.277239 TCCACTTGGATTCGCACG 57.723 55.556 0.00 0.00 39.78 5.34
2673 2797 2.032634 TCCACTTGGATTCGCACGC 61.033 57.895 0.00 0.00 39.78 5.34
2674 2798 2.324330 CCACTTGGATTCGCACGCA 61.324 57.895 0.00 0.00 37.39 5.24
2675 2799 1.573932 CACTTGGATTCGCACGCAA 59.426 52.632 0.00 0.00 0.00 4.85
2676 2800 0.725784 CACTTGGATTCGCACGCAAC 60.726 55.000 0.00 0.00 0.00 4.17
2677 2801 1.154225 CTTGGATTCGCACGCAACC 60.154 57.895 0.00 0.00 0.00 3.77
2678 2802 2.832818 CTTGGATTCGCACGCAACCG 62.833 60.000 0.00 0.00 41.14 4.44
2679 2803 3.115892 GGATTCGCACGCAACCGA 61.116 61.111 0.00 0.00 38.29 4.69
2680 2804 2.673114 GGATTCGCACGCAACCGAA 61.673 57.895 5.05 5.05 45.94 4.30
2681 2805 1.509162 GATTCGCACGCAACCGAAC 60.509 57.895 4.74 0.00 44.89 3.95
2682 2806 3.289816 ATTCGCACGCAACCGAACG 62.290 57.895 4.74 0.00 44.89 3.95
2683 2807 4.927444 TCGCACGCAACCGAACGA 62.927 61.111 0.00 0.00 40.70 3.85
2684 2808 4.409588 CGCACGCAACCGAACGAG 62.410 66.667 0.00 0.00 38.09 4.18
2685 2809 4.072088 GCACGCAACCGAACGAGG 62.072 66.667 0.00 0.00 38.29 4.63
2686 2810 4.072088 CACGCAACCGAACGAGGC 62.072 66.667 0.00 0.00 38.29 4.70
2689 2813 2.263540 GCAACCGAACGAGGCCTA 59.736 61.111 4.42 0.00 33.69 3.93
2690 2814 1.375013 GCAACCGAACGAGGCCTAA 60.375 57.895 4.42 0.00 33.69 2.69
2691 2815 0.743345 GCAACCGAACGAGGCCTAAT 60.743 55.000 4.42 0.00 33.69 1.73
2692 2816 1.734163 CAACCGAACGAGGCCTAATT 58.266 50.000 4.42 2.02 33.69 1.40
2693 2817 1.396996 CAACCGAACGAGGCCTAATTG 59.603 52.381 4.42 0.00 33.69 2.32
2694 2818 0.107848 ACCGAACGAGGCCTAATTGG 60.108 55.000 4.42 11.03 39.35 3.16
2695 2819 0.814010 CCGAACGAGGCCTAATTGGG 60.814 60.000 4.42 10.35 36.00 4.12
2713 2837 3.490759 CACGCATGCCGGTCAGTC 61.491 66.667 13.15 0.00 42.52 3.51
2714 2838 4.002506 ACGCATGCCGGTCAGTCA 62.003 61.111 13.15 0.00 42.52 3.41
2715 2839 3.490759 CGCATGCCGGTCAGTCAC 61.491 66.667 13.15 0.00 0.00 3.67
2716 2840 2.046892 GCATGCCGGTCAGTCACT 60.047 61.111 6.36 0.00 0.00 3.41
2717 2841 2.103042 GCATGCCGGTCAGTCACTC 61.103 63.158 6.36 0.00 0.00 3.51
2718 2842 1.293179 CATGCCGGTCAGTCACTCA 59.707 57.895 1.90 0.00 0.00 3.41
2719 2843 1.016130 CATGCCGGTCAGTCACTCAC 61.016 60.000 1.90 0.00 0.00 3.51
2720 2844 1.471829 ATGCCGGTCAGTCACTCACA 61.472 55.000 1.90 0.00 0.00 3.58
2721 2845 1.293498 GCCGGTCAGTCACTCACAT 59.707 57.895 1.90 0.00 0.00 3.21
2722 2846 1.016130 GCCGGTCAGTCACTCACATG 61.016 60.000 1.90 0.00 0.00 3.21
2723 2847 1.016130 CCGGTCAGTCACTCACATGC 61.016 60.000 0.00 0.00 0.00 4.06
2724 2848 1.016130 CGGTCAGTCACTCACATGCC 61.016 60.000 0.00 0.00 0.00 4.40
2725 2849 0.674895 GGTCAGTCACTCACATGCCC 60.675 60.000 0.00 0.00 0.00 5.36
2726 2850 0.322975 GTCAGTCACTCACATGCCCT 59.677 55.000 0.00 0.00 0.00 5.19
2727 2851 1.550524 GTCAGTCACTCACATGCCCTA 59.449 52.381 0.00 0.00 0.00 3.53
2728 2852 2.169352 GTCAGTCACTCACATGCCCTAT 59.831 50.000 0.00 0.00 0.00 2.57
2729 2853 2.169144 TCAGTCACTCACATGCCCTATG 59.831 50.000 0.00 0.00 42.68 2.23
2737 2861 2.792500 CATGCCCTATGTTTGCCGA 58.208 52.632 0.00 0.00 31.92 5.54
2738 2862 1.102154 CATGCCCTATGTTTGCCGAA 58.898 50.000 0.00 0.00 31.92 4.30
2739 2863 1.066002 CATGCCCTATGTTTGCCGAAG 59.934 52.381 0.00 0.00 31.92 3.79
2740 2864 0.326595 TGCCCTATGTTTGCCGAAGA 59.673 50.000 0.00 0.00 0.00 2.87
2741 2865 1.271652 TGCCCTATGTTTGCCGAAGAA 60.272 47.619 0.00 0.00 0.00 2.52
2742 2866 1.401905 GCCCTATGTTTGCCGAAGAAG 59.598 52.381 0.00 0.00 0.00 2.85
2743 2867 2.939640 GCCCTATGTTTGCCGAAGAAGA 60.940 50.000 0.00 0.00 0.00 2.87
2744 2868 2.939103 CCCTATGTTTGCCGAAGAAGAG 59.061 50.000 0.00 0.00 0.00 2.85
2745 2869 2.939103 CCTATGTTTGCCGAAGAAGAGG 59.061 50.000 0.00 0.00 0.00 3.69
2746 2870 2.859165 ATGTTTGCCGAAGAAGAGGA 57.141 45.000 0.00 0.00 0.00 3.71
2747 2871 2.859165 TGTTTGCCGAAGAAGAGGAT 57.141 45.000 0.00 0.00 0.00 3.24
2748 2872 3.973206 TGTTTGCCGAAGAAGAGGATA 57.027 42.857 0.00 0.00 0.00 2.59
2749 2873 3.596214 TGTTTGCCGAAGAAGAGGATAC 58.404 45.455 0.00 0.00 0.00 2.24
2750 2874 3.007506 TGTTTGCCGAAGAAGAGGATACA 59.992 43.478 0.00 0.00 41.41 2.29
2751 2875 4.192317 GTTTGCCGAAGAAGAGGATACAT 58.808 43.478 0.00 0.00 41.41 2.29
2752 2876 4.487714 TTGCCGAAGAAGAGGATACATT 57.512 40.909 0.00 0.00 41.41 2.71
2753 2877 4.487714 TGCCGAAGAAGAGGATACATTT 57.512 40.909 0.00 0.00 41.41 2.32
2754 2878 4.191544 TGCCGAAGAAGAGGATACATTTG 58.808 43.478 0.00 0.00 41.41 2.32
2755 2879 3.002759 GCCGAAGAAGAGGATACATTTGC 59.997 47.826 0.00 0.00 41.41 3.68
2756 2880 4.446371 CCGAAGAAGAGGATACATTTGCT 58.554 43.478 0.00 0.00 41.41 3.91
2757 2881 4.878397 CCGAAGAAGAGGATACATTTGCTT 59.122 41.667 0.00 0.00 41.41 3.91
2758 2882 5.007136 CCGAAGAAGAGGATACATTTGCTTC 59.993 44.000 0.00 0.00 41.41 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 1.031029 AAGTAGGGGTCGACGAGCTC 61.031 60.000 24.62 22.02 0.00 4.09
447 448 5.612725 TTCTCCTTCTTTGCCAATTTGTT 57.387 34.783 0.00 0.00 0.00 2.83
466 467 3.118454 CCGCGTCGGCACATTTCT 61.118 61.111 4.92 0.00 41.17 2.52
495 496 0.321346 TGCTCGATGGACTTCTGCAA 59.679 50.000 0.00 0.00 0.00 4.08
501 502 0.254178 AGGCAATGCTCGATGGACTT 59.746 50.000 4.82 0.00 0.00 3.01
586 587 0.095935 CTTGATGGCGTTGCTCTTCG 59.904 55.000 0.00 0.00 0.00 3.79
592 593 2.099062 CGAGCTTGATGGCGTTGC 59.901 61.111 0.00 0.00 37.29 4.17
613 614 2.473235 GCTCTTCATTAGCGTTCGATCC 59.527 50.000 0.00 0.00 0.00 3.36
615 616 3.165058 TGCTCTTCATTAGCGTTCGAT 57.835 42.857 0.00 0.00 43.11 3.59
616 617 2.647529 TGCTCTTCATTAGCGTTCGA 57.352 45.000 0.00 0.00 43.11 3.71
617 618 2.604914 ACATGCTCTTCATTAGCGTTCG 59.395 45.455 0.00 0.00 43.11 3.95
618 619 3.242543 CCACATGCTCTTCATTAGCGTTC 60.243 47.826 0.00 0.00 43.11 3.95
619 620 2.679837 CCACATGCTCTTCATTAGCGTT 59.320 45.455 0.00 0.00 43.11 4.84
620 621 2.283298 CCACATGCTCTTCATTAGCGT 58.717 47.619 0.00 0.00 43.11 5.07
621 622 1.600957 CCCACATGCTCTTCATTAGCG 59.399 52.381 0.00 0.00 43.11 4.26
622 623 1.952296 CCCCACATGCTCTTCATTAGC 59.048 52.381 0.00 0.00 40.50 3.09
623 624 2.579873 CCCCCACATGCTCTTCATTAG 58.420 52.381 0.00 0.00 31.79 1.73
624 625 2.734755 CCCCCACATGCTCTTCATTA 57.265 50.000 0.00 0.00 31.79 1.90
625 626 3.602104 CCCCCACATGCTCTTCATT 57.398 52.632 0.00 0.00 31.79 2.57
641 642 4.452733 CTCCAGACGTTCGGCCCC 62.453 72.222 0.00 0.00 0.00 5.80
642 643 2.722201 ATCTCCAGACGTTCGGCCC 61.722 63.158 0.00 0.00 0.00 5.80
643 644 1.519455 CATCTCCAGACGTTCGGCC 60.519 63.158 0.00 0.00 0.00 6.13
644 645 2.167861 GCATCTCCAGACGTTCGGC 61.168 63.158 0.00 0.00 0.00 5.54
645 646 1.519455 GGCATCTCCAGACGTTCGG 60.519 63.158 0.00 0.00 34.01 4.30
646 647 1.874019 CGGCATCTCCAGACGTTCG 60.874 63.158 0.00 0.00 34.01 3.95
647 648 0.389948 AACGGCATCTCCAGACGTTC 60.390 55.000 0.35 0.00 43.29 3.95
648 649 1.671742 AACGGCATCTCCAGACGTT 59.328 52.632 0.35 0.35 42.17 3.99
649 650 0.892755 TTAACGGCATCTCCAGACGT 59.107 50.000 0.00 0.00 39.74 4.34
650 651 1.278238 GTTAACGGCATCTCCAGACG 58.722 55.000 0.00 0.00 34.01 4.18
651 652 1.207329 AGGTTAACGGCATCTCCAGAC 59.793 52.381 0.00 0.00 34.01 3.51
652 653 1.568504 AGGTTAACGGCATCTCCAGA 58.431 50.000 0.00 0.00 34.01 3.86
653 654 2.093447 AGAAGGTTAACGGCATCTCCAG 60.093 50.000 0.00 0.00 34.01 3.86
654 655 1.906574 AGAAGGTTAACGGCATCTCCA 59.093 47.619 0.00 0.00 34.01 3.86
655 656 2.693267 AGAAGGTTAACGGCATCTCC 57.307 50.000 0.00 0.00 0.00 3.71
656 657 6.679327 AAAATAGAAGGTTAACGGCATCTC 57.321 37.500 0.00 0.00 0.00 2.75
657 658 7.201582 CGTAAAAATAGAAGGTTAACGGCATCT 60.202 37.037 0.00 3.36 0.00 2.90
658 659 6.903479 CGTAAAAATAGAAGGTTAACGGCATC 59.097 38.462 0.00 0.00 0.00 3.91
659 660 6.183360 CCGTAAAAATAGAAGGTTAACGGCAT 60.183 38.462 0.00 0.00 0.00 4.40
660 661 5.122082 CCGTAAAAATAGAAGGTTAACGGCA 59.878 40.000 0.00 0.00 0.00 5.69
661 662 5.351189 TCCGTAAAAATAGAAGGTTAACGGC 59.649 40.000 5.26 0.00 36.04 5.68
662 663 6.966435 TCCGTAAAAATAGAAGGTTAACGG 57.034 37.500 3.80 3.80 37.23 4.44
663 664 8.445493 ACATTCCGTAAAAATAGAAGGTTAACG 58.555 33.333 0.00 0.00 29.71 3.18
666 667 8.238631 GCAACATTCCGTAAAAATAGAAGGTTA 58.761 33.333 1.90 0.00 40.17 2.85
667 668 7.088272 GCAACATTCCGTAAAAATAGAAGGTT 58.912 34.615 0.00 0.00 42.12 3.50
668 669 6.207810 TGCAACATTCCGTAAAAATAGAAGGT 59.792 34.615 0.00 0.00 34.99 3.50
669 670 6.526674 GTGCAACATTCCGTAAAAATAGAAGG 59.473 38.462 0.00 0.00 36.32 3.46
670 671 7.081349 TGTGCAACATTCCGTAAAAATAGAAG 58.919 34.615 0.00 0.00 45.67 2.85
671 672 6.971602 TGTGCAACATTCCGTAAAAATAGAA 58.028 32.000 0.00 0.00 45.67 2.10
672 673 6.561737 TGTGCAACATTCCGTAAAAATAGA 57.438 33.333 0.00 0.00 45.67 1.98
688 689 1.659098 GGTACTACGAGCATGTGCAAC 59.341 52.381 7.83 0.40 45.16 4.17
689 690 1.404986 GGGTACTACGAGCATGTGCAA 60.405 52.381 7.83 0.00 45.16 4.08
690 691 0.174845 GGGTACTACGAGCATGTGCA 59.825 55.000 7.83 0.00 45.16 4.57
691 692 0.529992 GGGGTACTACGAGCATGTGC 60.530 60.000 0.00 0.00 42.49 4.57
692 693 0.248907 CGGGGTACTACGAGCATGTG 60.249 60.000 4.13 0.00 0.00 3.21
693 694 2.012902 GCGGGGTACTACGAGCATGT 62.013 60.000 12.64 0.00 0.00 3.21
694 695 1.299926 GCGGGGTACTACGAGCATG 60.300 63.158 12.64 0.00 0.00 4.06
695 696 1.455217 AGCGGGGTACTACGAGCAT 60.455 57.895 12.64 0.00 0.00 3.79
696 697 2.044650 AGCGGGGTACTACGAGCA 60.045 61.111 12.64 0.00 0.00 4.26
697 698 2.412112 CAGCGGGGTACTACGAGC 59.588 66.667 12.64 6.53 0.00 5.03
698 699 3.117372 CCAGCGGGGTACTACGAG 58.883 66.667 12.64 5.24 0.00 4.18
713 714 0.250727 GTGCAGAGCCTGGTTTACCA 60.251 55.000 1.01 1.01 45.30 3.25
714 715 1.298859 CGTGCAGAGCCTGGTTTACC 61.299 60.000 0.00 0.00 31.21 2.85
715 716 0.602905 ACGTGCAGAGCCTGGTTTAC 60.603 55.000 0.00 0.00 31.21 2.01
716 717 0.602638 CACGTGCAGAGCCTGGTTTA 60.603 55.000 0.82 0.00 31.21 2.01
717 718 1.893808 CACGTGCAGAGCCTGGTTT 60.894 57.895 0.82 0.00 31.21 3.27
718 719 2.281070 CACGTGCAGAGCCTGGTT 60.281 61.111 0.82 0.00 31.21 3.67
719 720 4.320456 CCACGTGCAGAGCCTGGT 62.320 66.667 10.91 0.00 31.21 4.00
721 722 4.007644 TCCCACGTGCAGAGCCTG 62.008 66.667 10.91 0.00 34.12 4.85
722 723 4.008933 GTCCCACGTGCAGAGCCT 62.009 66.667 10.91 0.00 0.00 4.58
723 724 3.825160 TTGTCCCACGTGCAGAGCC 62.825 63.158 10.91 0.00 0.00 4.70
724 725 1.237285 AATTGTCCCACGTGCAGAGC 61.237 55.000 10.91 5.01 0.00 4.09
725 726 2.093306 TAATTGTCCCACGTGCAGAG 57.907 50.000 10.91 0.00 0.00 3.35
726 727 2.552599 TTAATTGTCCCACGTGCAGA 57.447 45.000 10.91 6.20 0.00 4.26
727 728 2.095263 CCTTTAATTGTCCCACGTGCAG 60.095 50.000 10.91 3.47 0.00 4.41
728 729 1.883275 CCTTTAATTGTCCCACGTGCA 59.117 47.619 10.91 0.00 0.00 4.57
729 730 2.156098 TCCTTTAATTGTCCCACGTGC 58.844 47.619 10.91 0.00 0.00 5.34
730 731 4.574828 CCTATCCTTTAATTGTCCCACGTG 59.425 45.833 9.08 9.08 0.00 4.49
731 732 4.384868 CCCTATCCTTTAATTGTCCCACGT 60.385 45.833 0.00 0.00 0.00 4.49
732 733 4.134563 CCCTATCCTTTAATTGTCCCACG 58.865 47.826 0.00 0.00 0.00 4.94
733 734 3.889538 GCCCTATCCTTTAATTGTCCCAC 59.110 47.826 0.00 0.00 0.00 4.61
734 735 3.117284 GGCCCTATCCTTTAATTGTCCCA 60.117 47.826 0.00 0.00 0.00 4.37
735 736 3.497332 GGCCCTATCCTTTAATTGTCCC 58.503 50.000 0.00 0.00 0.00 4.46
736 737 3.146847 CGGCCCTATCCTTTAATTGTCC 58.853 50.000 0.00 0.00 0.00 4.02
737 738 3.146847 CCGGCCCTATCCTTTAATTGTC 58.853 50.000 0.00 0.00 0.00 3.18
738 739 2.158519 CCCGGCCCTATCCTTTAATTGT 60.159 50.000 0.00 0.00 0.00 2.71
739 740 2.514803 CCCGGCCCTATCCTTTAATTG 58.485 52.381 0.00 0.00 0.00 2.32
740 741 1.203013 GCCCGGCCCTATCCTTTAATT 60.203 52.381 0.00 0.00 0.00 1.40
741 742 0.404426 GCCCGGCCCTATCCTTTAAT 59.596 55.000 0.00 0.00 0.00 1.40
742 743 0.696485 AGCCCGGCCCTATCCTTTAA 60.696 55.000 5.55 0.00 0.00 1.52
743 744 1.074014 AGCCCGGCCCTATCCTTTA 60.074 57.895 5.55 0.00 0.00 1.85
744 745 2.368329 AGCCCGGCCCTATCCTTT 60.368 61.111 5.55 0.00 0.00 3.11
745 746 3.171388 CAGCCCGGCCCTATCCTT 61.171 66.667 5.55 0.00 0.00 3.36
748 749 3.631046 CTCCAGCCCGGCCCTATC 61.631 72.222 5.55 0.00 33.14 2.08
759 760 4.423209 ACCCCCTCTCCCTCCAGC 62.423 72.222 0.00 0.00 0.00 4.85
760 761 2.366167 CACCCCCTCTCCCTCCAG 60.366 72.222 0.00 0.00 0.00 3.86
761 762 2.874245 TCACCCCCTCTCCCTCCA 60.874 66.667 0.00 0.00 0.00 3.86
762 763 2.365768 GTCACCCCCTCTCCCTCC 60.366 72.222 0.00 0.00 0.00 4.30
763 764 2.760385 CGTCACCCCCTCTCCCTC 60.760 72.222 0.00 0.00 0.00 4.30
767 768 3.003763 AAGGCGTCACCCCCTCTC 61.004 66.667 0.00 0.00 40.58 3.20
768 769 3.003763 GAAGGCGTCACCCCCTCT 61.004 66.667 0.00 0.00 40.58 3.69
831 832 3.075005 CGGGATGGACGGAGGTGT 61.075 66.667 0.00 0.00 0.00 4.16
854 855 1.807142 GGCACTTTTGTCTCCTACAGC 59.193 52.381 0.00 0.00 39.87 4.40
904 905 1.739049 GCGAGAGTGAGAGATGGGG 59.261 63.158 0.00 0.00 0.00 4.96
1062 1083 3.382832 CTGTTCCCCGACGAGGCT 61.383 66.667 0.00 0.00 39.21 4.58
1232 1253 4.003788 CGTCCCTGCGGTGGAAGT 62.004 66.667 4.51 0.00 32.59 3.01
1258 1285 4.035102 GAAGAGGCGGGGGTGCTT 62.035 66.667 0.00 0.00 34.52 3.91
1407 1440 1.540797 GGTGTGCGTTGGTAGTGGTAA 60.541 52.381 0.00 0.00 0.00 2.85
1408 1441 0.033781 GGTGTGCGTTGGTAGTGGTA 59.966 55.000 0.00 0.00 0.00 3.25
1720 1753 3.357079 CTGTTGGGACTGTGGCGC 61.357 66.667 0.00 0.00 0.00 6.53
1743 1776 0.962356 ATGGCTACTGGTGCTGTTGC 60.962 55.000 0.00 0.00 40.20 4.17
1749 1782 2.045045 TGCCATGGCTACTGGTGC 60.045 61.111 35.53 8.06 42.51 5.01
1752 1785 2.194056 CCCTGCCATGGCTACTGG 59.806 66.667 35.53 27.99 42.51 4.00
1753 1786 2.194056 CCCCTGCCATGGCTACTG 59.806 66.667 35.53 21.81 42.51 2.74
1756 1789 1.925285 CTTGTCCCCTGCCATGGCTA 61.925 60.000 35.53 21.25 42.51 3.93
1757 1790 3.267233 TTGTCCCCTGCCATGGCT 61.267 61.111 35.53 0.00 42.51 4.75
1758 1791 2.757099 CTTGTCCCCTGCCATGGC 60.757 66.667 30.54 30.54 42.35 4.40
1759 1792 2.757099 GCTTGTCCCCTGCCATGG 60.757 66.667 7.63 7.63 0.00 3.66
1761 1794 3.329889 TCGCTTGTCCCCTGCCAT 61.330 61.111 0.00 0.00 0.00 4.40
1762 1795 4.329545 GTCGCTTGTCCCCTGCCA 62.330 66.667 0.00 0.00 0.00 4.92
1764 1797 2.032681 AAGTCGCTTGTCCCCTGC 59.967 61.111 0.00 0.00 0.00 4.85
1765 1798 0.036010 ATCAAGTCGCTTGTCCCCTG 60.036 55.000 15.83 0.00 41.66 4.45
1766 1799 0.250513 GATCAAGTCGCTTGTCCCCT 59.749 55.000 15.83 2.30 41.66 4.79
1767 1800 0.250513 AGATCAAGTCGCTTGTCCCC 59.749 55.000 15.83 7.07 41.66 4.81
1768 1801 1.363744 CAGATCAAGTCGCTTGTCCC 58.636 55.000 15.83 8.80 41.66 4.46
1769 1802 1.363744 CCAGATCAAGTCGCTTGTCC 58.636 55.000 15.83 10.56 41.66 4.02
1770 1803 0.723981 GCCAGATCAAGTCGCTTGTC 59.276 55.000 15.83 13.02 41.66 3.18
1771 1804 0.674895 GGCCAGATCAAGTCGCTTGT 60.675 55.000 15.83 6.84 41.66 3.16
1772 1805 0.674581 TGGCCAGATCAAGTCGCTTG 60.675 55.000 0.00 11.78 42.25 4.01
1773 1806 0.254178 ATGGCCAGATCAAGTCGCTT 59.746 50.000 13.05 0.00 0.00 4.68
1774 1807 0.463295 CATGGCCAGATCAAGTCGCT 60.463 55.000 13.05 0.00 0.00 4.93
1775 1808 1.442526 CCATGGCCAGATCAAGTCGC 61.443 60.000 13.05 0.00 0.00 5.19
1776 1809 0.816825 CCCATGGCCAGATCAAGTCG 60.817 60.000 13.05 0.00 0.00 4.18
1777 1810 0.548031 TCCCATGGCCAGATCAAGTC 59.452 55.000 13.05 0.00 0.00 3.01
1778 1811 0.549950 CTCCCATGGCCAGATCAAGT 59.450 55.000 13.05 0.00 0.00 3.16
1779 1812 0.178998 CCTCCCATGGCCAGATCAAG 60.179 60.000 13.05 4.75 0.00 3.02
1780 1813 1.648302 CCCTCCCATGGCCAGATCAA 61.648 60.000 13.05 0.00 0.00 2.57
1781 1814 2.080536 CCCTCCCATGGCCAGATCA 61.081 63.158 13.05 0.00 0.00 2.92
1782 1815 2.838467 CCCCTCCCATGGCCAGATC 61.838 68.421 13.05 0.00 0.00 2.75
1783 1816 2.780040 CCCCTCCCATGGCCAGAT 60.780 66.667 13.05 0.00 0.00 2.90
1784 1817 4.037413 TCCCCTCCCATGGCCAGA 62.037 66.667 13.05 1.55 0.00 3.86
1785 1818 3.813724 GTCCCCTCCCATGGCCAG 61.814 72.222 13.05 3.93 0.00 4.85
1786 1819 4.692041 TGTCCCCTCCCATGGCCA 62.692 66.667 8.56 8.56 0.00 5.36
1787 1820 3.346734 TTGTCCCCTCCCATGGCC 61.347 66.667 6.09 0.00 0.00 5.36
1810 1843 6.888105 ACAAAAATAATGATGTGGGGATTCC 58.112 36.000 0.00 0.00 0.00 3.01
1844 1877 2.639839 ACAATATGATCCCTCTTCCCCG 59.360 50.000 0.00 0.00 0.00 5.73
1858 1891 6.969366 TGGTTTCACTTCACTTCACAATATG 58.031 36.000 0.00 0.00 0.00 1.78
1860 1893 5.530915 CCTGGTTTCACTTCACTTCACAATA 59.469 40.000 0.00 0.00 0.00 1.90
1861 1894 4.339247 CCTGGTTTCACTTCACTTCACAAT 59.661 41.667 0.00 0.00 0.00 2.71
1863 1896 3.278574 CCTGGTTTCACTTCACTTCACA 58.721 45.455 0.00 0.00 0.00 3.58
1958 2023 7.233553 TCTCAATAACCGACCAATCATCTATCT 59.766 37.037 0.00 0.00 0.00 1.98
1959 2024 7.329717 GTCTCAATAACCGACCAATCATCTATC 59.670 40.741 0.00 0.00 0.00 2.08
1960 2025 7.155328 GTCTCAATAACCGACCAATCATCTAT 58.845 38.462 0.00 0.00 0.00 1.98
1961 2026 6.462487 GGTCTCAATAACCGACCAATCATCTA 60.462 42.308 0.00 0.00 45.08 1.98
1962 2027 5.360591 GTCTCAATAACCGACCAATCATCT 58.639 41.667 0.00 0.00 0.00 2.90
1964 2029 4.451900 GGTCTCAATAACCGACCAATCAT 58.548 43.478 0.00 0.00 45.08 2.45
1965 2030 3.869065 GGTCTCAATAACCGACCAATCA 58.131 45.455 0.00 0.00 45.08 2.57
1970 2035 3.604875 TCTTGGTCTCAATAACCGACC 57.395 47.619 0.00 0.00 45.76 4.79
1971 2036 4.626172 GTCTTCTTGGTCTCAATAACCGAC 59.374 45.833 0.00 0.00 39.81 4.79
1972 2037 4.617530 CGTCTTCTTGGTCTCAATAACCGA 60.618 45.833 0.00 0.00 39.81 4.69
1973 2038 3.612860 CGTCTTCTTGGTCTCAATAACCG 59.387 47.826 0.00 0.00 39.81 4.44
1974 2039 4.817517 TCGTCTTCTTGGTCTCAATAACC 58.182 43.478 0.00 0.00 37.31 2.85
1975 2040 6.100004 TCATCGTCTTCTTGGTCTCAATAAC 58.900 40.000 0.00 0.00 31.75 1.89
1976 2041 6.280855 TCATCGTCTTCTTGGTCTCAATAA 57.719 37.500 0.00 0.00 31.75 1.40
1977 2042 5.914898 TCATCGTCTTCTTGGTCTCAATA 57.085 39.130 0.00 0.00 31.75 1.90
1978 2043 4.808414 TCATCGTCTTCTTGGTCTCAAT 57.192 40.909 0.00 0.00 31.75 2.57
1979 2044 4.220602 TCATCATCGTCTTCTTGGTCTCAA 59.779 41.667 0.00 0.00 0.00 3.02
1980 2045 3.763897 TCATCATCGTCTTCTTGGTCTCA 59.236 43.478 0.00 0.00 0.00 3.27
1981 2046 4.358851 CTCATCATCGTCTTCTTGGTCTC 58.641 47.826 0.00 0.00 0.00 3.36
1982 2047 3.131933 CCTCATCATCGTCTTCTTGGTCT 59.868 47.826 0.00 0.00 0.00 3.85
1983 2048 3.131223 TCCTCATCATCGTCTTCTTGGTC 59.869 47.826 0.00 0.00 0.00 4.02
1984 2049 3.099905 TCCTCATCATCGTCTTCTTGGT 58.900 45.455 0.00 0.00 0.00 3.67
1985 2050 3.715495 CTCCTCATCATCGTCTTCTTGG 58.285 50.000 0.00 0.00 0.00 3.61
1986 2051 3.122297 GCTCCTCATCATCGTCTTCTTG 58.878 50.000 0.00 0.00 0.00 3.02
1987 2052 2.762887 TGCTCCTCATCATCGTCTTCTT 59.237 45.455 0.00 0.00 0.00 2.52
1988 2053 2.100584 GTGCTCCTCATCATCGTCTTCT 59.899 50.000 0.00 0.00 0.00 2.85
1989 2054 2.100584 AGTGCTCCTCATCATCGTCTTC 59.899 50.000 0.00 0.00 0.00 2.87
1990 2055 2.100584 GAGTGCTCCTCATCATCGTCTT 59.899 50.000 0.00 0.00 40.17 3.01
1991 2056 1.680735 GAGTGCTCCTCATCATCGTCT 59.319 52.381 0.00 0.00 40.17 4.18
1992 2057 1.599171 CGAGTGCTCCTCATCATCGTC 60.599 57.143 5.10 0.00 40.48 4.20
1993 2058 0.383590 CGAGTGCTCCTCATCATCGT 59.616 55.000 5.10 0.00 40.48 3.73
1994 2059 0.318529 CCGAGTGCTCCTCATCATCG 60.319 60.000 5.10 0.00 40.48 3.84
2012 2077 1.001815 ACAAATGTAAGCACGCACACC 60.002 47.619 0.00 0.00 0.00 4.16
2013 2078 2.307049 GACAAATGTAAGCACGCACAC 58.693 47.619 0.00 0.00 0.00 3.82
2014 2079 1.265635 GGACAAATGTAAGCACGCACA 59.734 47.619 0.00 0.00 0.00 4.57
2016 2081 1.890876 AGGACAAATGTAAGCACGCA 58.109 45.000 0.00 0.00 0.00 5.24
2019 2084 7.865385 TGACAAAATAAGGACAAATGTAAGCAC 59.135 33.333 0.00 0.00 0.00 4.40
2021 2086 8.986477 ATGACAAAATAAGGACAAATGTAAGC 57.014 30.769 0.00 0.00 0.00 3.09
2042 2107 6.127647 TGTTGAGAGGCCAAATCAAATATGAC 60.128 38.462 16.14 6.91 38.69 3.06
2044 2109 6.038356 GTGTTGAGAGGCCAAATCAAATATG 58.962 40.000 16.14 0.00 34.91 1.78
2045 2110 5.716228 TGTGTTGAGAGGCCAAATCAAATAT 59.284 36.000 16.14 0.00 34.91 1.28
2063 2134 5.459762 GTGGTCAATTGATCTTGTTGTGTTG 59.540 40.000 19.21 0.00 0.00 3.33
2065 2136 4.889409 AGTGGTCAATTGATCTTGTTGTGT 59.111 37.500 19.21 0.00 0.00 3.72
2066 2137 5.443185 AGTGGTCAATTGATCTTGTTGTG 57.557 39.130 19.21 0.00 0.00 3.33
2071 2142 5.909621 ATTGGAGTGGTCAATTGATCTTG 57.090 39.130 19.21 0.00 31.49 3.02
2088 2159 2.312741 AGATGGCAGGAAGGAAATTGGA 59.687 45.455 0.00 0.00 0.00 3.53
2089 2160 2.743553 AGATGGCAGGAAGGAAATTGG 58.256 47.619 0.00 0.00 0.00 3.16
2101 2172 2.202570 GCTTGCGCAAGATGGCAG 60.203 61.111 45.25 24.41 40.75 4.85
2113 2184 4.880696 ACAAGATGAAAGATCTAGGCTTGC 59.119 41.667 16.83 0.00 36.01 4.01
2118 2189 5.426504 ACAGCACAAGATGAAAGATCTAGG 58.573 41.667 0.00 0.00 34.60 3.02
2142 2230 6.716628 TGCATTTGAAGGAGTAGTGAGAAATT 59.283 34.615 0.00 0.00 0.00 1.82
2150 2238 5.809001 TGATTCTGCATTTGAAGGAGTAGT 58.191 37.500 0.00 0.00 0.00 2.73
2153 2241 4.334759 CGATGATTCTGCATTTGAAGGAGT 59.665 41.667 0.00 0.00 0.00 3.85
2154 2242 4.573607 TCGATGATTCTGCATTTGAAGGAG 59.426 41.667 0.00 0.00 0.00 3.69
2157 2245 5.681543 CACATCGATGATTCTGCATTTGAAG 59.318 40.000 31.33 0.00 0.00 3.02
2179 2267 2.731976 GTCTCGTTGAATCTGTGACCAC 59.268 50.000 0.00 0.00 0.00 4.16
2180 2268 2.364002 TGTCTCGTTGAATCTGTGACCA 59.636 45.455 0.00 0.00 0.00 4.02
2181 2269 2.989840 CTGTCTCGTTGAATCTGTGACC 59.010 50.000 0.00 0.00 0.00 4.02
2186 2310 5.521372 TCATATTGCTGTCTCGTTGAATCTG 59.479 40.000 0.00 0.00 0.00 2.90
2204 2328 9.035607 CGAGAAAGCTACATAAACTGTCATATT 57.964 33.333 0.00 0.00 39.39 1.28
2208 2332 6.020971 TCGAGAAAGCTACATAAACTGTCA 57.979 37.500 0.00 0.00 39.39 3.58
2213 2337 6.887376 TGTCATCGAGAAAGCTACATAAAC 57.113 37.500 0.00 0.00 0.00 2.01
2214 2338 6.871492 TGTTGTCATCGAGAAAGCTACATAAA 59.129 34.615 0.00 0.00 0.00 1.40
2216 2340 5.961272 TGTTGTCATCGAGAAAGCTACATA 58.039 37.500 0.00 0.00 0.00 2.29
2220 2344 5.048013 TCTCTTGTTGTCATCGAGAAAGCTA 60.048 40.000 0.00 0.00 32.00 3.32
2222 2346 3.990469 TCTCTTGTTGTCATCGAGAAAGC 59.010 43.478 0.00 0.00 32.00 3.51
2229 2353 5.596268 TGATTGTTCTCTTGTTGTCATCG 57.404 39.130 0.00 0.00 0.00 3.84
2231 2355 6.698008 TGTTGATTGTTCTCTTGTTGTCAT 57.302 33.333 0.00 0.00 0.00 3.06
2238 2362 6.963242 CGTATCCATTGTTGATTGTTCTCTTG 59.037 38.462 0.00 0.00 0.00 3.02
2239 2363 6.094048 CCGTATCCATTGTTGATTGTTCTCTT 59.906 38.462 0.00 0.00 0.00 2.85
2240 2364 5.586243 CCGTATCCATTGTTGATTGTTCTCT 59.414 40.000 0.00 0.00 0.00 3.10
2241 2365 5.220854 CCCGTATCCATTGTTGATTGTTCTC 60.221 44.000 0.00 0.00 0.00 2.87
2242 2366 4.640201 CCCGTATCCATTGTTGATTGTTCT 59.360 41.667 0.00 0.00 0.00 3.01
2243 2367 4.733523 GCCCGTATCCATTGTTGATTGTTC 60.734 45.833 0.00 0.00 0.00 3.18
2244 2368 3.130340 GCCCGTATCCATTGTTGATTGTT 59.870 43.478 0.00 0.00 0.00 2.83
2245 2369 2.687935 GCCCGTATCCATTGTTGATTGT 59.312 45.455 0.00 0.00 0.00 2.71
2246 2370 2.687425 TGCCCGTATCCATTGTTGATTG 59.313 45.455 0.00 0.00 0.00 2.67
2247 2371 3.011566 TGCCCGTATCCATTGTTGATT 57.988 42.857 0.00 0.00 0.00 2.57
2248 2372 2.727123 TGCCCGTATCCATTGTTGAT 57.273 45.000 0.00 0.00 0.00 2.57
2250 2374 2.296792 TCATGCCCGTATCCATTGTTG 58.703 47.619 0.00 0.00 0.00 3.33
2256 2380 1.134521 GTCAGTTCATGCCCGTATCCA 60.135 52.381 0.00 0.00 0.00 3.41
2257 2381 1.139058 AGTCAGTTCATGCCCGTATCC 59.861 52.381 0.00 0.00 0.00 2.59
2259 2383 3.350219 AAAGTCAGTTCATGCCCGTAT 57.650 42.857 0.00 0.00 0.00 3.06
2264 2388 4.622740 GCAATGTTAAAGTCAGTTCATGCC 59.377 41.667 0.00 0.00 0.00 4.40
2285 2409 5.645067 AGTACGTACTACTACATTGTGAGCA 59.355 40.000 26.36 0.00 33.53 4.26
2286 2410 5.964168 CAGTACGTACTACTACATTGTGAGC 59.036 44.000 26.95 0.00 33.53 4.26
2287 2411 6.457934 CCCAGTACGTACTACTACATTGTGAG 60.458 46.154 26.95 10.37 33.53 3.51
2288 2412 5.355071 CCCAGTACGTACTACTACATTGTGA 59.645 44.000 26.95 0.00 33.53 3.58
2291 2415 5.008415 CCTCCCAGTACGTACTACTACATTG 59.992 48.000 26.95 13.21 33.53 2.82
2298 2422 2.019984 CCACCTCCCAGTACGTACTAC 58.980 57.143 26.95 3.00 34.13 2.73
2300 2424 0.324091 CCCACCTCCCAGTACGTACT 60.324 60.000 22.45 22.45 36.90 2.73
2301 2425 0.323725 TCCCACCTCCCAGTACGTAC 60.324 60.000 18.10 18.10 0.00 3.67
2302 2426 0.409092 TTCCCACCTCCCAGTACGTA 59.591 55.000 0.00 0.00 0.00 3.57
2303 2427 1.156803 TTCCCACCTCCCAGTACGT 59.843 57.895 0.00 0.00 0.00 3.57
2304 2428 1.189524 TGTTCCCACCTCCCAGTACG 61.190 60.000 0.00 0.00 0.00 3.67
2305 2429 1.286248 ATGTTCCCACCTCCCAGTAC 58.714 55.000 0.00 0.00 0.00 2.73
2306 2430 2.953093 TATGTTCCCACCTCCCAGTA 57.047 50.000 0.00 0.00 0.00 2.74
2307 2431 1.846439 CATATGTTCCCACCTCCCAGT 59.154 52.381 0.00 0.00 0.00 4.00
2308 2432 1.143684 CCATATGTTCCCACCTCCCAG 59.856 57.143 1.24 0.00 0.00 4.45
2309 2433 1.221635 CCATATGTTCCCACCTCCCA 58.778 55.000 1.24 0.00 0.00 4.37
2310 2434 1.222567 ACCATATGTTCCCACCTCCC 58.777 55.000 1.24 0.00 0.00 4.30
2311 2435 2.241176 TCAACCATATGTTCCCACCTCC 59.759 50.000 1.24 0.00 34.00 4.30
2312 2436 3.644966 TCAACCATATGTTCCCACCTC 57.355 47.619 1.24 0.00 34.00 3.85
2313 2437 4.264352 ACATTCAACCATATGTTCCCACCT 60.264 41.667 1.24 0.00 34.00 4.00
2314 2438 4.023291 ACATTCAACCATATGTTCCCACC 58.977 43.478 1.24 0.00 34.00 4.61
2315 2439 4.142182 CCACATTCAACCATATGTTCCCAC 60.142 45.833 1.24 0.00 34.00 4.61
2328 2452 6.563422 TGCTGATAATTAAGCCACATTCAAC 58.437 36.000 6.68 0.00 38.71 3.18
2334 2458 5.887598 AGTTGATGCTGATAATTAAGCCACA 59.112 36.000 6.68 4.67 38.71 4.17
2338 2462 7.701445 AGTTCAGTTGATGCTGATAATTAAGC 58.299 34.615 2.70 2.70 43.99 3.09
2353 2477 3.244526 TGGATGCAGCTAAGTTCAGTTGA 60.245 43.478 0.22 0.00 0.00 3.18
2357 2481 2.703416 TGTGGATGCAGCTAAGTTCAG 58.297 47.619 0.22 0.00 0.00 3.02
2359 2483 2.813754 TGTTGTGGATGCAGCTAAGTTC 59.186 45.455 0.22 0.00 0.00 3.01
2374 2498 2.481568 CAGTACTCCTGCATGTGTTGTG 59.518 50.000 2.04 0.00 33.59 3.33
2376 2500 2.771089 ACAGTACTCCTGCATGTGTTG 58.229 47.619 2.04 0.00 45.68 3.33
2408 2532 7.789831 AGTGGAGGATAGATAAAGTGATAACCA 59.210 37.037 0.00 0.00 0.00 3.67
2410 2534 8.861086 TGAGTGGAGGATAGATAAAGTGATAAC 58.139 37.037 0.00 0.00 0.00 1.89
2411 2535 9.083422 CTGAGTGGAGGATAGATAAAGTGATAA 57.917 37.037 0.00 0.00 0.00 1.75
2412 2536 8.228206 ACTGAGTGGAGGATAGATAAAGTGATA 58.772 37.037 0.00 0.00 0.00 2.15
2413 2537 7.072562 ACTGAGTGGAGGATAGATAAAGTGAT 58.927 38.462 0.00 0.00 0.00 3.06
2414 2538 6.436027 ACTGAGTGGAGGATAGATAAAGTGA 58.564 40.000 0.00 0.00 0.00 3.41
2415 2539 6.723298 ACTGAGTGGAGGATAGATAAAGTG 57.277 41.667 0.00 0.00 0.00 3.16
2416 2540 6.407525 GCAACTGAGTGGAGGATAGATAAAGT 60.408 42.308 0.00 0.00 0.00 2.66
2417 2541 5.988561 GCAACTGAGTGGAGGATAGATAAAG 59.011 44.000 0.00 0.00 0.00 1.85
2418 2542 5.425217 TGCAACTGAGTGGAGGATAGATAAA 59.575 40.000 0.00 0.00 0.00 1.40
2419 2543 4.962362 TGCAACTGAGTGGAGGATAGATAA 59.038 41.667 0.00 0.00 0.00 1.75
2442 2566 5.127031 ACAAAGTCTTACACAAAATGCACCT 59.873 36.000 0.00 0.00 0.00 4.00
2444 2568 6.529829 TCAACAAAGTCTTACACAAAATGCAC 59.470 34.615 0.00 0.00 0.00 4.57
2445 2569 6.625362 TCAACAAAGTCTTACACAAAATGCA 58.375 32.000 0.00 0.00 0.00 3.96
2446 2570 7.487829 TCTTCAACAAAGTCTTACACAAAATGC 59.512 33.333 0.00 0.00 36.31 3.56
2447 2571 8.909708 TCTTCAACAAAGTCTTACACAAAATG 57.090 30.769 0.00 0.00 36.31 2.32
2448 2572 8.956426 TCTCTTCAACAAAGTCTTACACAAAAT 58.044 29.630 0.00 0.00 36.31 1.82
2450 2574 7.822334 TCTCTCTTCAACAAAGTCTTACACAAA 59.178 33.333 0.00 0.00 36.31 2.83
2452 2576 6.873997 TCTCTCTTCAACAAAGTCTTACACA 58.126 36.000 0.00 0.00 36.31 3.72
2453 2577 7.772332 TTCTCTCTTCAACAAAGTCTTACAC 57.228 36.000 0.00 0.00 36.31 2.90
2456 2580 9.838339 ATTCTTTCTCTCTTCAACAAAGTCTTA 57.162 29.630 0.00 0.00 36.31 2.10
2466 2590 5.121298 CGTGATGCATTCTTTCTCTCTTCAA 59.879 40.000 0.00 0.00 0.00 2.69
2467 2591 4.628766 CGTGATGCATTCTTTCTCTCTTCA 59.371 41.667 0.00 0.00 0.00 3.02
2473 2597 4.389992 TCAGAACGTGATGCATTCTTTCTC 59.610 41.667 15.96 5.15 30.17 2.87
2474 2598 4.318332 TCAGAACGTGATGCATTCTTTCT 58.682 39.130 0.00 9.33 30.17 2.52
2475 2599 4.668576 TCAGAACGTGATGCATTCTTTC 57.331 40.909 0.00 7.23 30.17 2.62
2476 2600 5.633830 ATTCAGAACGTGATGCATTCTTT 57.366 34.783 0.00 0.00 34.17 2.52
2479 2603 8.338259 AGTAATAATTCAGAACGTGATGCATTC 58.662 33.333 0.00 0.00 34.17 2.67
2482 2606 6.037062 CCAGTAATAATTCAGAACGTGATGCA 59.963 38.462 0.00 0.00 34.17 3.96
2483 2607 6.422223 CCAGTAATAATTCAGAACGTGATGC 58.578 40.000 0.00 0.00 34.17 3.91
2484 2608 6.761242 TCCCAGTAATAATTCAGAACGTGATG 59.239 38.462 0.00 0.00 34.17 3.07
2486 2610 6.288941 TCCCAGTAATAATTCAGAACGTGA 57.711 37.500 0.00 0.00 0.00 4.35
2487 2611 6.037172 CCTTCCCAGTAATAATTCAGAACGTG 59.963 42.308 0.00 0.00 0.00 4.49
2490 2614 7.939784 AACCTTCCCAGTAATAATTCAGAAC 57.060 36.000 0.00 0.00 0.00 3.01
2491 2615 9.681062 CTTAACCTTCCCAGTAATAATTCAGAA 57.319 33.333 0.00 0.00 0.00 3.02
2492 2616 9.053472 TCTTAACCTTCCCAGTAATAATTCAGA 57.947 33.333 0.00 0.00 0.00 3.27
2493 2617 9.331282 CTCTTAACCTTCCCAGTAATAATTCAG 57.669 37.037 0.00 0.00 0.00 3.02
2495 2619 9.110502 CACTCTTAACCTTCCCAGTAATAATTC 57.889 37.037 0.00 0.00 0.00 2.17
2496 2620 8.832735 TCACTCTTAACCTTCCCAGTAATAATT 58.167 33.333 0.00 0.00 0.00 1.40
2497 2621 8.388656 TCACTCTTAACCTTCCCAGTAATAAT 57.611 34.615 0.00 0.00 0.00 1.28
2498 2622 7.580882 GCTCACTCTTAACCTTCCCAGTAATAA 60.581 40.741 0.00 0.00 0.00 1.40
2499 2623 6.127140 GCTCACTCTTAACCTTCCCAGTAATA 60.127 42.308 0.00 0.00 0.00 0.98
2500 2624 5.338463 GCTCACTCTTAACCTTCCCAGTAAT 60.338 44.000 0.00 0.00 0.00 1.89
2501 2625 4.020485 GCTCACTCTTAACCTTCCCAGTAA 60.020 45.833 0.00 0.00 0.00 2.24
2502 2626 3.514309 GCTCACTCTTAACCTTCCCAGTA 59.486 47.826 0.00 0.00 0.00 2.74
2503 2627 2.303311 GCTCACTCTTAACCTTCCCAGT 59.697 50.000 0.00 0.00 0.00 4.00
2504 2628 2.355209 GGCTCACTCTTAACCTTCCCAG 60.355 54.545 0.00 0.00 0.00 4.45
2505 2629 1.628846 GGCTCACTCTTAACCTTCCCA 59.371 52.381 0.00 0.00 0.00 4.37
2506 2630 1.065345 GGGCTCACTCTTAACCTTCCC 60.065 57.143 0.00 0.00 0.00 3.97
2511 2635 3.454812 TGGATAAGGGCTCACTCTTAACC 59.545 47.826 5.34 5.34 38.26 2.85
2515 2639 3.308473 GGTTTGGATAAGGGCTCACTCTT 60.308 47.826 0.00 0.00 0.00 2.85
2549 2673 2.014857 GAGGATTAACCGAACAAGCCC 58.985 52.381 0.00 0.00 44.74 5.19
2550 2674 2.937149 GAGAGGATTAACCGAACAAGCC 59.063 50.000 0.00 0.00 44.74 4.35
2551 2675 2.937149 GGAGAGGATTAACCGAACAAGC 59.063 50.000 0.00 0.00 44.74 4.01
2552 2676 3.532542 GGGAGAGGATTAACCGAACAAG 58.467 50.000 0.00 0.00 44.74 3.16
2553 2677 2.237893 GGGGAGAGGATTAACCGAACAA 59.762 50.000 0.00 0.00 44.74 2.83
2554 2678 1.835531 GGGGAGAGGATTAACCGAACA 59.164 52.381 0.00 0.00 44.74 3.18
2555 2679 1.835531 TGGGGAGAGGATTAACCGAAC 59.164 52.381 0.00 0.00 44.74 3.95
2556 2680 2.257391 TGGGGAGAGGATTAACCGAA 57.743 50.000 0.00 0.00 44.74 4.30
2557 2681 2.116238 CTTGGGGAGAGGATTAACCGA 58.884 52.381 0.00 0.00 44.74 4.69
2558 2682 2.103263 CTCTTGGGGAGAGGATTAACCG 59.897 54.545 0.00 0.00 46.77 4.44
2559 2683 3.847671 CTCTTGGGGAGAGGATTAACC 57.152 52.381 0.00 0.00 46.77 2.85
2568 2692 2.200081 CCTTCAATCCTCTTGGGGAGA 58.800 52.381 0.00 0.00 44.45 3.71
2569 2693 1.213926 CCCTTCAATCCTCTTGGGGAG 59.786 57.143 0.00 0.00 38.92 4.30
2570 2694 1.298953 CCCTTCAATCCTCTTGGGGA 58.701 55.000 0.00 0.00 39.95 4.81
2571 2695 0.259938 CCCCTTCAATCCTCTTGGGG 59.740 60.000 0.00 0.00 46.89 4.96
2572 2696 1.298953 TCCCCTTCAATCCTCTTGGG 58.701 55.000 0.00 0.00 34.68 4.12
2573 2697 3.053395 TCAATCCCCTTCAATCCTCTTGG 60.053 47.826 0.00 0.00 0.00 3.61
2574 2698 3.950395 GTCAATCCCCTTCAATCCTCTTG 59.050 47.826 0.00 0.00 0.00 3.02
2575 2699 3.593328 TGTCAATCCCCTTCAATCCTCTT 59.407 43.478 0.00 0.00 0.00 2.85
2576 2700 3.192944 TGTCAATCCCCTTCAATCCTCT 58.807 45.455 0.00 0.00 0.00 3.69
2577 2701 3.652057 TGTCAATCCCCTTCAATCCTC 57.348 47.619 0.00 0.00 0.00 3.71
2578 2702 3.309410 CCTTGTCAATCCCCTTCAATCCT 60.309 47.826 0.00 0.00 0.00 3.24
2579 2703 3.026694 CCTTGTCAATCCCCTTCAATCC 58.973 50.000 0.00 0.00 0.00 3.01
2580 2704 3.968265 TCCTTGTCAATCCCCTTCAATC 58.032 45.455 0.00 0.00 0.00 2.67
2581 2705 4.614967 ATCCTTGTCAATCCCCTTCAAT 57.385 40.909 0.00 0.00 0.00 2.57
2582 2706 4.088634 CAATCCTTGTCAATCCCCTTCAA 58.911 43.478 0.00 0.00 0.00 2.69
2583 2707 3.564133 CCAATCCTTGTCAATCCCCTTCA 60.564 47.826 0.00 0.00 0.00 3.02
2584 2708 3.026694 CCAATCCTTGTCAATCCCCTTC 58.973 50.000 0.00 0.00 0.00 3.46
2585 2709 2.383338 ACCAATCCTTGTCAATCCCCTT 59.617 45.455 0.00 0.00 0.00 3.95
2586 2710 2.003072 ACCAATCCTTGTCAATCCCCT 58.997 47.619 0.00 0.00 0.00 4.79
2587 2711 2.532250 ACCAATCCTTGTCAATCCCC 57.468 50.000 0.00 0.00 0.00 4.81
2588 2712 3.578282 ACAAACCAATCCTTGTCAATCCC 59.422 43.478 0.00 0.00 29.80 3.85
2589 2713 4.871933 ACAAACCAATCCTTGTCAATCC 57.128 40.909 0.00 0.00 29.80 3.01
2590 2714 8.711457 CAAAATACAAACCAATCCTTGTCAATC 58.289 33.333 0.00 0.00 37.05 2.67
2591 2715 8.428063 TCAAAATACAAACCAATCCTTGTCAAT 58.572 29.630 0.00 0.00 37.05 2.57
2592 2716 7.708752 GTCAAAATACAAACCAATCCTTGTCAA 59.291 33.333 0.00 0.00 37.05 3.18
2593 2717 7.069331 AGTCAAAATACAAACCAATCCTTGTCA 59.931 33.333 0.00 0.00 37.05 3.58
2594 2718 7.433680 AGTCAAAATACAAACCAATCCTTGTC 58.566 34.615 0.00 0.00 37.05 3.18
2595 2719 7.360113 AGTCAAAATACAAACCAATCCTTGT 57.640 32.000 0.00 0.00 39.13 3.16
2596 2720 9.191995 GTAAGTCAAAATACAAACCAATCCTTG 57.808 33.333 0.00 0.00 0.00 3.61
2597 2721 8.919145 TGTAAGTCAAAATACAAACCAATCCTT 58.081 29.630 0.00 0.00 0.00 3.36
2598 2722 8.472007 TGTAAGTCAAAATACAAACCAATCCT 57.528 30.769 0.00 0.00 0.00 3.24
2599 2723 9.191995 CTTGTAAGTCAAAATACAAACCAATCC 57.808 33.333 0.00 0.00 40.42 3.01
2600 2724 9.959749 TCTTGTAAGTCAAAATACAAACCAATC 57.040 29.630 0.00 0.00 40.42 2.67
2601 2725 9.965824 CTCTTGTAAGTCAAAATACAAACCAAT 57.034 29.630 0.00 0.00 40.42 3.16
2602 2726 9.179909 TCTCTTGTAAGTCAAAATACAAACCAA 57.820 29.630 0.00 0.00 40.42 3.67
2603 2727 8.740123 TCTCTTGTAAGTCAAAATACAAACCA 57.260 30.769 0.00 0.00 40.42 3.67
2613 2737 9.807921 AGGGATTTAAATCTCTTGTAAGTCAAA 57.192 29.630 22.52 0.00 43.63 2.69
2614 2738 9.449719 GAGGGATTTAAATCTCTTGTAAGTCAA 57.550 33.333 27.39 0.00 46.01 3.18
2615 2739 8.826765 AGAGGGATTTAAATCTCTTGTAAGTCA 58.173 33.333 27.39 0.00 46.01 3.41
2616 2740 9.320352 GAGAGGGATTTAAATCTCTTGTAAGTC 57.680 37.037 27.39 15.16 46.01 3.01
2617 2741 8.826765 TGAGAGGGATTTAAATCTCTTGTAAGT 58.173 33.333 27.39 7.61 46.01 2.24
2618 2742 9.672673 TTGAGAGGGATTTAAATCTCTTGTAAG 57.327 33.333 27.39 0.00 46.01 2.34
2620 2744 9.449719 GTTTGAGAGGGATTTAAATCTCTTGTA 57.550 33.333 27.39 15.56 46.01 2.41
2621 2745 7.394641 GGTTTGAGAGGGATTTAAATCTCTTGT 59.605 37.037 27.39 19.17 46.01 3.16
2622 2746 7.148000 GGGTTTGAGAGGGATTTAAATCTCTTG 60.148 40.741 27.39 0.00 46.01 3.02
2623 2747 6.892456 GGGTTTGAGAGGGATTTAAATCTCTT 59.108 38.462 27.39 18.28 46.01 2.85
2625 2749 5.594725 GGGGTTTGAGAGGGATTTAAATCTC 59.405 44.000 23.85 21.46 38.91 2.75
2626 2750 5.256389 AGGGGTTTGAGAGGGATTTAAATCT 59.744 40.000 23.85 8.27 35.73 2.40
2627 2751 5.519808 AGGGGTTTGAGAGGGATTTAAATC 58.480 41.667 18.22 18.22 34.66 2.17
2628 2752 5.552430 AGGGGTTTGAGAGGGATTTAAAT 57.448 39.130 0.00 0.00 0.00 1.40
2629 2753 5.162925 TGAAGGGGTTTGAGAGGGATTTAAA 60.163 40.000 0.00 0.00 0.00 1.52
2630 2754 4.355588 TGAAGGGGTTTGAGAGGGATTTAA 59.644 41.667 0.00 0.00 0.00 1.52
2631 2755 3.920197 TGAAGGGGTTTGAGAGGGATTTA 59.080 43.478 0.00 0.00 0.00 1.40
2632 2756 2.721906 TGAAGGGGTTTGAGAGGGATTT 59.278 45.455 0.00 0.00 0.00 2.17
2633 2757 2.358258 TGAAGGGGTTTGAGAGGGATT 58.642 47.619 0.00 0.00 0.00 3.01
2634 2758 2.059756 TGAAGGGGTTTGAGAGGGAT 57.940 50.000 0.00 0.00 0.00 3.85
2635 2759 1.827792 TTGAAGGGGTTTGAGAGGGA 58.172 50.000 0.00 0.00 0.00 4.20
2636 2760 2.621668 GGATTGAAGGGGTTTGAGAGGG 60.622 54.545 0.00 0.00 0.00 4.30
2637 2761 2.041620 TGGATTGAAGGGGTTTGAGAGG 59.958 50.000 0.00 0.00 0.00 3.69
2638 2762 3.084786 GTGGATTGAAGGGGTTTGAGAG 58.915 50.000 0.00 0.00 0.00 3.20
2639 2763 2.716424 AGTGGATTGAAGGGGTTTGAGA 59.284 45.455 0.00 0.00 0.00 3.27
2640 2764 3.160679 AGTGGATTGAAGGGGTTTGAG 57.839 47.619 0.00 0.00 0.00 3.02
2641 2765 3.230134 CAAGTGGATTGAAGGGGTTTGA 58.770 45.455 0.00 0.00 41.83 2.69
2642 2766 2.299867 CCAAGTGGATTGAAGGGGTTTG 59.700 50.000 0.00 0.00 41.83 2.93
2643 2767 2.178984 TCCAAGTGGATTGAAGGGGTTT 59.821 45.455 0.00 0.00 41.83 3.27
2644 2768 1.786441 TCCAAGTGGATTGAAGGGGTT 59.214 47.619 0.00 0.00 41.83 4.11
2645 2769 1.455822 TCCAAGTGGATTGAAGGGGT 58.544 50.000 0.00 0.00 41.83 4.95
2656 2780 1.851021 TTGCGTGCGAATCCAAGTGG 61.851 55.000 0.00 0.00 0.00 4.00
2657 2781 0.725784 GTTGCGTGCGAATCCAAGTG 60.726 55.000 0.00 0.00 0.00 3.16
2658 2782 1.574428 GTTGCGTGCGAATCCAAGT 59.426 52.632 0.00 0.00 0.00 3.16
2659 2783 1.154225 GGTTGCGTGCGAATCCAAG 60.154 57.895 0.00 0.00 0.00 3.61
2660 2784 2.950673 GGTTGCGTGCGAATCCAA 59.049 55.556 0.00 0.00 0.00 3.53
2661 2785 3.418913 CGGTTGCGTGCGAATCCA 61.419 61.111 0.00 0.00 0.00 3.41
2662 2786 2.673114 TTCGGTTGCGTGCGAATCC 61.673 57.895 0.00 0.00 0.00 3.01
2663 2787 1.509162 GTTCGGTTGCGTGCGAATC 60.509 57.895 0.00 0.00 0.00 2.52
2664 2788 2.554272 GTTCGGTTGCGTGCGAAT 59.446 55.556 0.00 0.00 0.00 3.34
2665 2789 3.990806 CGTTCGGTTGCGTGCGAA 61.991 61.111 0.00 0.00 0.00 4.70
2666 2790 4.927444 TCGTTCGGTTGCGTGCGA 62.927 61.111 0.00 0.00 0.00 5.10
2667 2791 4.409588 CTCGTTCGGTTGCGTGCG 62.410 66.667 0.00 0.00 0.00 5.34
2668 2792 4.072088 CCTCGTTCGGTTGCGTGC 62.072 66.667 0.00 0.00 0.00 5.34
2669 2793 4.072088 GCCTCGTTCGGTTGCGTG 62.072 66.667 0.00 0.00 0.00 5.34
2671 2795 3.636313 TAGGCCTCGTTCGGTTGCG 62.636 63.158 9.68 0.00 0.00 4.85
2672 2796 0.743345 ATTAGGCCTCGTTCGGTTGC 60.743 55.000 9.68 0.00 0.00 4.17
2673 2797 1.396996 CAATTAGGCCTCGTTCGGTTG 59.603 52.381 9.68 1.32 0.00 3.77
2674 2798 1.677820 CCAATTAGGCCTCGTTCGGTT 60.678 52.381 9.68 0.00 0.00 4.44
2675 2799 0.107848 CCAATTAGGCCTCGTTCGGT 60.108 55.000 9.68 0.00 0.00 4.69
2676 2800 0.814010 CCCAATTAGGCCTCGTTCGG 60.814 60.000 9.68 3.62 35.39 4.30
2677 2801 2.690326 CCCAATTAGGCCTCGTTCG 58.310 57.895 9.68 0.00 35.39 3.95
2686 2810 1.066257 GCATGCGTGCCCAATTAGG 59.934 57.895 20.59 0.00 45.76 2.69
2687 2811 4.715983 GCATGCGTGCCCAATTAG 57.284 55.556 20.59 0.00 45.76 1.73
2696 2820 3.490759 GACTGACCGGCATGCGTG 61.491 66.667 12.44 7.61 0.00 5.34
2697 2821 4.002506 TGACTGACCGGCATGCGT 62.003 61.111 12.44 4.53 0.00 5.24
2698 2822 3.490759 GTGACTGACCGGCATGCG 61.491 66.667 12.44 7.08 0.00 4.73
2699 2823 2.046892 AGTGACTGACCGGCATGC 60.047 61.111 9.90 9.90 0.00 4.06
2700 2824 1.016130 GTGAGTGACTGACCGGCATG 61.016 60.000 0.00 0.00 0.00 4.06
2701 2825 1.293498 GTGAGTGACTGACCGGCAT 59.707 57.895 0.00 0.00 0.00 4.40
2702 2826 1.471829 ATGTGAGTGACTGACCGGCA 61.472 55.000 0.00 0.00 0.00 5.69
2703 2827 1.016130 CATGTGAGTGACTGACCGGC 61.016 60.000 0.00 0.00 0.00 6.13
2704 2828 1.016130 GCATGTGAGTGACTGACCGG 61.016 60.000 0.00 0.00 0.00 5.28
2705 2829 1.016130 GGCATGTGAGTGACTGACCG 61.016 60.000 0.00 0.00 0.00 4.79
2706 2830 0.674895 GGGCATGTGAGTGACTGACC 60.675 60.000 0.00 0.00 0.00 4.02
2707 2831 0.322975 AGGGCATGTGAGTGACTGAC 59.677 55.000 0.00 0.00 0.00 3.51
2708 2832 1.937191 TAGGGCATGTGAGTGACTGA 58.063 50.000 0.00 0.00 0.00 3.41
2709 2833 2.093288 ACATAGGGCATGTGAGTGACTG 60.093 50.000 2.11 0.00 46.41 3.51
2710 2834 2.191400 ACATAGGGCATGTGAGTGACT 58.809 47.619 2.11 0.00 46.41 3.41
2711 2835 2.698855 ACATAGGGCATGTGAGTGAC 57.301 50.000 2.11 0.00 46.41 3.67
2719 2843 1.066002 CTTCGGCAAACATAGGGCATG 59.934 52.381 0.00 0.00 40.78 4.06
2720 2844 1.064758 TCTTCGGCAAACATAGGGCAT 60.065 47.619 0.00 0.00 0.00 4.40
2721 2845 0.326595 TCTTCGGCAAACATAGGGCA 59.673 50.000 0.00 0.00 0.00 5.36
2722 2846 1.401905 CTTCTTCGGCAAACATAGGGC 59.598 52.381 0.00 0.00 0.00 5.19
2723 2847 2.939103 CTCTTCTTCGGCAAACATAGGG 59.061 50.000 0.00 0.00 0.00 3.53
2724 2848 2.939103 CCTCTTCTTCGGCAAACATAGG 59.061 50.000 0.00 0.00 0.00 2.57
2725 2849 3.861840 TCCTCTTCTTCGGCAAACATAG 58.138 45.455 0.00 0.00 0.00 2.23
2726 2850 3.973206 TCCTCTTCTTCGGCAAACATA 57.027 42.857 0.00 0.00 0.00 2.29
2727 2851 2.859165 TCCTCTTCTTCGGCAAACAT 57.141 45.000 0.00 0.00 0.00 2.71
2728 2852 2.859165 ATCCTCTTCTTCGGCAAACA 57.141 45.000 0.00 0.00 0.00 2.83
2729 2853 3.596214 TGTATCCTCTTCTTCGGCAAAC 58.404 45.455 0.00 0.00 0.00 2.93
2730 2854 3.973206 TGTATCCTCTTCTTCGGCAAA 57.027 42.857 0.00 0.00 0.00 3.68
2731 2855 4.487714 AATGTATCCTCTTCTTCGGCAA 57.512 40.909 0.00 0.00 0.00 4.52
2732 2856 4.191544 CAAATGTATCCTCTTCTTCGGCA 58.808 43.478 0.00 0.00 0.00 5.69
2733 2857 3.002759 GCAAATGTATCCTCTTCTTCGGC 59.997 47.826 0.00 0.00 0.00 5.54
2734 2858 4.446371 AGCAAATGTATCCTCTTCTTCGG 58.554 43.478 0.00 0.00 0.00 4.30
2735 2859 6.042144 GAAGCAAATGTATCCTCTTCTTCG 57.958 41.667 0.00 0.00 0.00 3.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.