Multiple sequence alignment - TraesCS1B01G447300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G447300 chr1B 100.000 2900 0 0 1 2900 667082372 667085271 0.000000e+00 5356.0
1 TraesCS1B01G447300 chr1B 86.135 1053 124 10 4 1051 666918720 666917685 0.000000e+00 1116.0
2 TraesCS1B01G447300 chr1B 86.027 1052 133 8 4 1051 667110647 667111688 0.000000e+00 1116.0
3 TraesCS1B01G447300 chr1B 85.269 1059 119 18 987 2017 667111798 667112847 0.000000e+00 1057.0
4 TraesCS1B01G447300 chr1B 86.221 958 109 18 1077 2017 667118403 667119354 0.000000e+00 1016.0
5 TraesCS1B01G447300 chr1B 85.498 993 121 9 1045 2017 666917541 666916552 0.000000e+00 1014.0
6 TraesCS1B01G447300 chr1B 87.064 487 54 6 1482 1964 667133011 667133492 2.540000e-150 542.0
7 TraesCS1B01G447300 chr1B 85.746 449 57 4 620 1065 667113555 667113999 4.380000e-128 468.0
8 TraesCS1B01G447300 chr1D 85.294 1054 137 11 4 1051 478978747 478979788 0.000000e+00 1072.0
9 TraesCS1B01G447300 chr1D 84.672 1096 134 16 986 2054 478979897 478980985 0.000000e+00 1062.0
10 TraesCS1B01G447300 chr1D 88.564 411 35 4 1558 1961 478988976 478989381 3.360000e-134 488.0
11 TraesCS1B01G447300 chr1D 79.762 168 10 12 2324 2491 478981056 478981199 1.840000e-17 100.0
12 TraesCS1B01G447300 chr1D 81.982 111 18 2 1220 1329 38910926 38911035 3.080000e-15 93.5
13 TraesCS1B01G447300 chr1A 84.868 1097 129 22 996 2072 575223243 575224322 0.000000e+00 1072.0
14 TraesCS1B01G447300 chr1A 84.601 1052 145 11 4 1051 575222017 575223055 0.000000e+00 1029.0
15 TraesCS1B01G447300 chr1A 87.967 482 51 3 1482 1961 575242824 575243300 1.950000e-156 562.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G447300 chr1B 667082372 667085271 2899 False 5356.000000 5356 100.000000 1 2900 1 chr1B.!!$F1 2899
1 TraesCS1B01G447300 chr1B 666916552 666918720 2168 True 1065.000000 1116 85.816500 4 2017 2 chr1B.!!$R1 2013
2 TraesCS1B01G447300 chr1B 667118403 667119354 951 False 1016.000000 1016 86.221000 1077 2017 1 chr1B.!!$F2 940
3 TraesCS1B01G447300 chr1B 667110647 667113999 3352 False 880.333333 1116 85.680667 4 2017 3 chr1B.!!$F4 2013
4 TraesCS1B01G447300 chr1D 478978747 478981199 2452 False 744.666667 1072 83.242667 4 2491 3 chr1D.!!$F3 2487
5 TraesCS1B01G447300 chr1A 575222017 575224322 2305 False 1050.500000 1072 84.734500 4 2072 2 chr1A.!!$F2 2068

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
765 775 0.257616 AGTTCCTCTCTCTCCGAGGG 59.742 60.0 6.27 0.0 46.43 4.3 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2149 2447 0.034896 GAGTTTCCTGGTCTTCCGCA 59.965 55.0 0.0 0.0 36.3 5.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 3.813724 GTGGCGGGATTCCTAAAGTTATC 59.186 47.826 2.01 0.00 0.00 1.75
33 34 3.064931 CGGGATTCCTAAAGTTATCGCC 58.935 50.000 2.01 0.00 0.00 5.54
52 53 3.099267 CCACTATAGGCCAACTCTTCG 57.901 52.381 5.01 0.00 0.00 3.79
58 59 0.467290 AGGCCAACTCTTCGCCAAAA 60.467 50.000 5.01 0.00 45.56 2.44
81 88 6.775594 AAAATAGCCAATGGAGGTTTCTAC 57.224 37.500 2.05 0.00 0.00 2.59
82 89 5.717119 AATAGCCAATGGAGGTTTCTACT 57.283 39.130 2.05 0.00 0.00 2.57
83 90 3.356529 AGCCAATGGAGGTTTCTACTG 57.643 47.619 2.05 0.00 0.00 2.74
84 91 2.025887 AGCCAATGGAGGTTTCTACTGG 60.026 50.000 2.05 0.00 0.00 4.00
85 92 2.945890 GCCAATGGAGGTTTCTACTGGG 60.946 54.545 2.05 0.00 0.00 4.45
86 93 2.357154 CCAATGGAGGTTTCTACTGGGG 60.357 54.545 0.00 0.00 0.00 4.96
87 94 1.596496 ATGGAGGTTTCTACTGGGGG 58.404 55.000 0.00 0.00 0.00 5.40
88 95 0.494551 TGGAGGTTTCTACTGGGGGA 59.505 55.000 0.00 0.00 0.00 4.81
89 96 1.082194 TGGAGGTTTCTACTGGGGGAT 59.918 52.381 0.00 0.00 0.00 3.85
96 103 4.412528 GGTTTCTACTGGGGGATGTCTATT 59.587 45.833 0.00 0.00 0.00 1.73
106 113 3.620488 GGGATGTCTATTTCAGCCACAA 58.380 45.455 2.81 0.00 42.34 3.33
108 115 4.462483 GGGATGTCTATTTCAGCCACAAAA 59.538 41.667 2.81 0.00 42.34 2.44
111 118 7.147915 GGGATGTCTATTTCAGCCACAAAATTA 60.148 37.037 2.81 0.00 42.34 1.40
112 119 8.250332 GGATGTCTATTTCAGCCACAAAATTAA 58.750 33.333 0.00 0.00 40.56 1.40
123 130 6.757947 CAGCCACAAAATTAATGAAGGGTATG 59.242 38.462 0.00 0.00 0.00 2.39
139 146 7.720957 TGAAGGGTATGAATGATGACTTTATGG 59.279 37.037 0.00 0.00 0.00 2.74
156 163 1.671379 GGGCAAGTTGGAGACCGAC 60.671 63.158 4.75 0.00 38.16 4.79
158 165 2.027625 GCAAGTTGGAGACCGACCG 61.028 63.158 4.75 0.00 38.65 4.79
170 177 1.070105 CCGACCGAGGGTTTCACAA 59.930 57.895 0.00 0.00 35.25 3.33
196 203 8.766994 TTTAAGGGATCTATTTTCTTGGATGG 57.233 34.615 0.00 0.00 0.00 3.51
234 241 0.813210 GCTCAGATTCCCTCAAGCCG 60.813 60.000 0.00 0.00 31.92 5.52
240 247 2.103263 AGATTCCCTCAAGCCGTGTATC 59.897 50.000 0.00 0.00 0.00 2.24
250 257 4.887655 TCAAGCCGTGTATCTTCTATCTGA 59.112 41.667 0.00 0.00 0.00 3.27
264 271 3.891977 TCTATCTGACAATCTTCCCTCCG 59.108 47.826 0.00 0.00 0.00 4.63
265 272 2.231716 TCTGACAATCTTCCCTCCGA 57.768 50.000 0.00 0.00 0.00 4.55
273 280 0.395312 TCTTCCCTCCGAACCACAAC 59.605 55.000 0.00 0.00 0.00 3.32
280 287 2.290071 CCTCCGAACCACAACATAAGGT 60.290 50.000 0.00 0.00 37.20 3.50
282 289 4.383770 CCTCCGAACCACAACATAAGGTAT 60.384 45.833 0.00 0.00 34.63 2.73
287 294 1.864711 CCACAACATAAGGTATCGGCG 59.135 52.381 0.00 0.00 0.00 6.46
313 320 0.532573 GAGACGGTGGATTGCTGAGA 59.467 55.000 0.00 0.00 0.00 3.27
363 370 1.140652 GCAGAGGAGAATGGGAAGAGG 59.859 57.143 0.00 0.00 0.00 3.69
383 390 2.940410 GGTTGTTCTTGGAACTCGTCAA 59.060 45.455 10.98 0.00 0.00 3.18
408 415 6.209192 ACTTGAGCATAATCCAACAATGTCAA 59.791 34.615 0.00 0.00 0.00 3.18
430 437 7.335924 GTCAAAAGGCAATGAAGTACCTATACA 59.664 37.037 0.00 0.00 33.30 2.29
470 477 4.880696 TCATGAATACATCATTTCACGGCA 59.119 37.500 0.00 0.00 46.85 5.69
480 487 3.763360 TCATTTCACGGCAAATGGAAGAT 59.237 39.130 16.81 0.00 42.02 2.40
501 508 6.879400 AGATAACCTTGTCTTCATACTGGAC 58.121 40.000 0.00 0.00 0.00 4.02
504 511 2.496070 CCTTGTCTTCATACTGGACGGA 59.504 50.000 0.00 0.00 33.21 4.69
505 512 3.512680 CTTGTCTTCATACTGGACGGAC 58.487 50.000 0.00 0.00 33.21 4.79
514 521 1.376424 CTGGACGGACATTGCAGCT 60.376 57.895 0.00 0.00 0.00 4.24
515 522 0.957395 CTGGACGGACATTGCAGCTT 60.957 55.000 0.00 0.00 0.00 3.74
529 536 1.464608 GCAGCTTGAACTCGCAACATA 59.535 47.619 0.00 0.00 0.00 2.29
534 541 3.325870 CTTGAACTCGCAACATACAGGA 58.674 45.455 0.00 0.00 0.00 3.86
553 560 4.080919 CAGGACAACATCTCACCATAAGGA 60.081 45.833 0.00 0.00 38.69 3.36
554 561 4.163078 AGGACAACATCTCACCATAAGGAG 59.837 45.833 0.00 0.00 38.69 3.69
557 564 2.412591 ACATCTCACCATAAGGAGGGG 58.587 52.381 0.00 0.00 38.69 4.79
586 593 2.305927 AGGGACATCACAGTGTTTAGGG 59.694 50.000 0.00 0.00 31.16 3.53
600 607 2.618709 GTTTAGGGGCATGGATTTCTCG 59.381 50.000 0.00 0.00 0.00 4.04
603 610 2.329339 GGCATGGATTTCTCGCGC 59.671 61.111 0.00 0.00 0.00 6.86
682 689 4.398358 TGAGTCTACTTCGGGTGTTAGATG 59.602 45.833 0.00 0.00 0.00 2.90
707 717 5.057149 GGCGGACACAAATATTCTAGATGT 58.943 41.667 0.00 0.00 0.00 3.06
723 733 4.298103 AGATGTTGACCTTGAGCAGATT 57.702 40.909 0.00 0.00 0.00 2.40
725 735 2.507484 TGTTGACCTTGAGCAGATTGG 58.493 47.619 0.00 0.00 0.00 3.16
726 736 1.200948 GTTGACCTTGAGCAGATTGGC 59.799 52.381 0.00 0.00 0.00 4.52
732 742 1.891150 CTTGAGCAGATTGGCAAGGTT 59.109 47.619 5.96 0.00 35.34 3.50
759 769 4.334481 CCTCGTCTTAAGTTCCTCTCTCTC 59.666 50.000 1.63 0.00 0.00 3.20
765 775 0.257616 AGTTCCTCTCTCTCCGAGGG 59.742 60.000 6.27 0.00 46.43 4.30
780 790 2.093447 CCGAGGGTGCAAAGAGATAAGT 60.093 50.000 0.00 0.00 0.00 2.24
794 804 9.258826 CAAAGAGATAAGTCATCTACCAGAATG 57.741 37.037 0.00 0.00 44.41 2.67
803 813 4.405680 TCATCTACCAGAATGATTCGGTGT 59.594 41.667 22.73 14.37 39.69 4.16
835 845 3.854784 GCTGCAAACTTTGGATGTCAGAC 60.855 47.826 3.69 0.00 0.00 3.51
851 861 4.238514 GTCAGACACACCTCAATAGTCAC 58.761 47.826 0.00 0.00 0.00 3.67
859 869 2.165845 ACCTCAATAGTCACGCTACCAC 59.834 50.000 0.00 0.00 31.59 4.16
865 875 1.612676 AGTCACGCTACCACTGTGTA 58.387 50.000 7.08 0.00 35.20 2.90
874 884 4.678044 CGCTACCACTGTGTATCATCAAGT 60.678 45.833 7.08 0.00 0.00 3.16
900 910 2.919666 AGTTGCAATACATTCGTGCC 57.080 45.000 0.59 0.00 37.48 5.01
904 914 1.011242 CAATACATTCGTGCCGGCG 60.011 57.895 23.90 8.74 0.00 6.46
921 931 1.284657 GCGCCATCATATCATCGGAG 58.715 55.000 0.00 0.00 0.00 4.63
928 938 4.221482 CCATCATATCATCGGAGGAAGACA 59.779 45.833 0.00 0.00 0.00 3.41
936 946 4.099573 TCATCGGAGGAAGACAATTACTCC 59.900 45.833 8.58 8.58 43.29 3.85
947 957 4.689345 AGACAATTACTCCGTTGCAAGTAC 59.311 41.667 0.00 0.00 0.00 2.73
967 977 6.354130 AGTACACCAACAACAAATGTAGACT 58.646 36.000 0.00 0.00 42.99 3.24
975 985 4.690748 ACAACAAATGTAGACTGGACATCG 59.309 41.667 0.00 0.00 41.63 3.84
980 990 0.450583 GTAGACTGGACATCGACGCA 59.549 55.000 0.00 0.00 0.00 5.24
981 991 0.733150 TAGACTGGACATCGACGCAG 59.267 55.000 0.00 0.00 0.00 5.18
1003 1013 1.279846 TGGAGAGCAGCAATGACATGA 59.720 47.619 0.00 0.00 0.00 3.07
1016 1026 5.122869 GCAATGACATGATCACAACACTACT 59.877 40.000 0.00 0.00 41.24 2.57
1022 1032 6.240894 ACATGATCACAACACTACTGGAAAT 58.759 36.000 0.00 0.00 0.00 2.17
1057 1307 3.814842 TCAGACATCAACACCATTGTCAC 59.185 43.478 4.90 0.00 40.69 3.67
1065 1315 0.603707 CACCATTGTCACGGAGCTGT 60.604 55.000 0.00 0.00 0.00 4.40
1067 1317 0.320683 CCATTGTCACGGAGCTGTCA 60.321 55.000 0.00 0.00 0.00 3.58
1073 1323 1.812922 CACGGAGCTGTCAGCCATC 60.813 63.158 21.32 12.90 43.77 3.51
1074 1324 2.202987 CGGAGCTGTCAGCCATCC 60.203 66.667 21.32 19.91 43.77 3.51
1075 1325 2.729479 CGGAGCTGTCAGCCATCCT 61.729 63.158 23.60 7.29 43.77 3.24
1079 1329 0.035630 AGCTGTCAGCCATCCTGTTC 60.036 55.000 21.32 0.00 43.77 3.18
1103 1353 4.434520 GTGTCTAGCTGGTTATCCAAGTC 58.565 47.826 0.00 0.00 43.81 3.01
1155 1405 2.197465 GAGGTTCCTGTAGGGATTGGT 58.803 52.381 0.00 0.00 44.66 3.67
1162 1412 2.158755 CCTGTAGGGATTGGTAGCTTGG 60.159 54.545 0.00 0.00 37.23 3.61
1163 1413 2.505819 CTGTAGGGATTGGTAGCTTGGT 59.494 50.000 0.00 0.00 0.00 3.67
1176 1426 1.948721 GCTTGGTGGCCTTGCATACC 61.949 60.000 3.32 1.76 37.67 2.73
1212 1462 7.867403 GTCAATGCCAATATTCGTAATGGAAAT 59.133 33.333 0.00 0.00 34.82 2.17
1280 1530 0.447801 GTGTCTGGCATAAACAGGCG 59.552 55.000 0.00 0.00 43.27 5.52
1319 1570 0.748005 AATTTCATCTCGGGCCACGG 60.748 55.000 4.39 0.55 44.45 4.94
1365 1631 3.827302 GACTCGATAAGGATAAGCAGGGA 59.173 47.826 0.00 0.00 0.00 4.20
1382 1648 4.380444 GCAGGGATTATTTGCTTGTTTCGA 60.380 41.667 0.00 0.00 35.05 3.71
1410 1676 1.360393 TTTCCCAGCCACCCAAGACT 61.360 55.000 0.00 0.00 0.00 3.24
1514 1780 6.715347 TCTTGAGCTCACTATACTATTGCA 57.285 37.500 18.03 0.00 0.00 4.08
1546 1812 2.564062 CAGTTCCTTGGTGAATTGCCAT 59.436 45.455 0.00 0.00 35.71 4.40
1554 1820 9.461312 TTCCTTGGTGAATTGCCATATATATAC 57.539 33.333 0.00 0.00 35.71 1.47
1575 1841 1.493772 TCTTACGTCGCCTTTGTGTG 58.506 50.000 0.00 0.00 0.00 3.82
1625 1891 0.621571 AGCACCCTGGGAGATGCTAA 60.622 55.000 23.53 0.00 46.36 3.09
1630 1896 2.239907 ACCCTGGGAGATGCTAACTTTC 59.760 50.000 22.23 0.00 0.00 2.62
1675 1941 0.106769 TTGCACCTCCAAGTTGCAGA 60.107 50.000 0.00 0.00 36.82 4.26
1685 1951 4.870363 TCCAAGTTGCAGATAACTTTTGC 58.130 39.130 0.00 0.00 45.85 3.68
1735 2001 3.368843 GCTGAAGATTCACTGCTCTGGTA 60.369 47.826 0.00 0.00 32.90 3.25
1765 2031 2.457598 TGCGGATTTCTGGACTAGAGT 58.542 47.619 0.00 0.00 36.61 3.24
1792 2058 1.000955 GTGGTCTCGATGAAGTGTGGT 59.999 52.381 0.00 0.00 0.00 4.16
1812 2078 1.507140 TGAAGGGTTCCTATGGCGAT 58.493 50.000 0.00 0.00 31.13 4.58
1855 2121 3.058224 ACAGCAACTTTCCGAGCATAAAC 60.058 43.478 0.00 0.00 0.00 2.01
1877 2143 2.481289 AAACCTGTCCTGAAGCTAGC 57.519 50.000 6.62 6.62 0.00 3.42
1880 2146 1.875813 CTGTCCTGAAGCTAGCGCG 60.876 63.158 9.55 0.00 42.32 6.86
1906 2172 1.542472 GCTCGTCCTTATAGGCTCTCC 59.458 57.143 0.00 0.00 34.61 3.71
1907 2173 1.807742 CTCGTCCTTATAGGCTCTCCG 59.192 57.143 0.00 0.00 34.61 4.63
1908 2174 0.882474 CGTCCTTATAGGCTCTCCGG 59.118 60.000 0.00 0.00 34.61 5.14
1910 2176 0.187606 TCCTTATAGGCTCTCCGGCA 59.812 55.000 0.00 0.00 41.46 5.69
1941 2225 9.998106 ATGTGTTATTTCTGTACTTGTAAGTCT 57.002 29.630 0.00 0.00 40.37 3.24
1955 2244 7.178712 CTTGTAAGTCTTAACAAGTCCTGTG 57.821 40.000 17.77 0.00 44.83 3.66
1963 2256 3.703001 AACAAGTCCTGTGGGAGTATG 57.297 47.619 0.00 0.00 43.98 2.39
1977 2270 2.279741 GAGTATGGTTCTGCATTGCGA 58.720 47.619 3.84 1.74 0.00 5.10
1985 2280 1.725641 TCTGCATTGCGAATCGACTT 58.274 45.000 6.91 0.00 0.00 3.01
1989 2284 1.128507 GCATTGCGAATCGACTTCACA 59.871 47.619 6.91 0.00 33.10 3.58
1991 2286 2.148916 TTGCGAATCGACTTCACACT 57.851 45.000 6.91 0.00 33.10 3.55
1992 2287 1.698165 TGCGAATCGACTTCACACTC 58.302 50.000 6.91 0.00 33.10 3.51
1995 2290 2.028523 GCGAATCGACTTCACACTCATG 59.971 50.000 6.91 0.00 33.10 3.07
2011 2306 4.880120 CACTCATGTATGAACTTCTGGCAT 59.120 41.667 0.00 0.00 36.18 4.40
2017 2312 7.994911 TCATGTATGAACTTCTGGCATAGAAAT 59.005 33.333 4.03 0.00 38.17 2.17
2018 2313 9.276590 CATGTATGAACTTCTGGCATAGAAATA 57.723 33.333 4.03 0.00 44.47 1.40
2024 2319 9.113838 TGAACTTCTGGCATAGAAATATTTCTC 57.886 33.333 29.45 17.70 43.72 2.87
2029 2324 6.479990 TCTGGCATAGAAATATTTCTCGTGTG 59.520 38.462 29.45 23.00 43.72 3.82
2030 2325 6.345298 TGGCATAGAAATATTTCTCGTGTGA 58.655 36.000 29.45 14.65 43.72 3.58
2032 2327 7.041848 TGGCATAGAAATATTTCTCGTGTGATG 60.042 37.037 29.45 24.86 43.72 3.07
2034 2329 8.006590 GCATAGAAATATTTCTCGTGTGATGTC 58.993 37.037 29.45 18.18 43.72 3.06
2035 2330 9.254133 CATAGAAATATTTCTCGTGTGATGTCT 57.746 33.333 29.45 8.08 43.72 3.41
2036 2331 7.531280 AGAAATATTTCTCGTGTGATGTCTG 57.469 36.000 22.43 0.00 43.72 3.51
2037 2332 7.099764 AGAAATATTTCTCGTGTGATGTCTGT 58.900 34.615 22.43 0.00 43.72 3.41
2038 2333 6.893958 AATATTTCTCGTGTGATGTCTGTC 57.106 37.500 0.00 0.00 0.00 3.51
2039 2334 4.527509 ATTTCTCGTGTGATGTCTGTCT 57.472 40.909 0.00 0.00 0.00 3.41
2040 2335 4.322080 TTTCTCGTGTGATGTCTGTCTT 57.678 40.909 0.00 0.00 0.00 3.01
2041 2336 4.322080 TTCTCGTGTGATGTCTGTCTTT 57.678 40.909 0.00 0.00 0.00 2.52
2042 2337 3.642705 TCTCGTGTGATGTCTGTCTTTG 58.357 45.455 0.00 0.00 0.00 2.77
2043 2338 3.068165 TCTCGTGTGATGTCTGTCTTTGT 59.932 43.478 0.00 0.00 0.00 2.83
2044 2339 3.792401 TCGTGTGATGTCTGTCTTTGTT 58.208 40.909 0.00 0.00 0.00 2.83
2045 2340 4.188462 TCGTGTGATGTCTGTCTTTGTTT 58.812 39.130 0.00 0.00 0.00 2.83
2046 2341 4.033932 TCGTGTGATGTCTGTCTTTGTTTG 59.966 41.667 0.00 0.00 0.00 2.93
2047 2342 4.201812 CGTGTGATGTCTGTCTTTGTTTGT 60.202 41.667 0.00 0.00 0.00 2.83
2048 2343 5.030295 GTGTGATGTCTGTCTTTGTTTGTG 58.970 41.667 0.00 0.00 0.00 3.33
2049 2344 4.699735 TGTGATGTCTGTCTTTGTTTGTGT 59.300 37.500 0.00 0.00 0.00 3.72
2050 2345 5.182950 TGTGATGTCTGTCTTTGTTTGTGTT 59.817 36.000 0.00 0.00 0.00 3.32
2051 2346 5.739161 GTGATGTCTGTCTTTGTTTGTGTTC 59.261 40.000 0.00 0.00 0.00 3.18
2052 2347 5.647658 TGATGTCTGTCTTTGTTTGTGTTCT 59.352 36.000 0.00 0.00 0.00 3.01
2053 2348 5.295431 TGTCTGTCTTTGTTTGTGTTCTG 57.705 39.130 0.00 0.00 0.00 3.02
2054 2349 4.155826 TGTCTGTCTTTGTTTGTGTTCTGG 59.844 41.667 0.00 0.00 0.00 3.86
2055 2350 3.128589 TCTGTCTTTGTTTGTGTTCTGGC 59.871 43.478 0.00 0.00 0.00 4.85
2056 2351 2.165437 TGTCTTTGTTTGTGTTCTGGCC 59.835 45.455 0.00 0.00 0.00 5.36
2057 2352 2.165437 GTCTTTGTTTGTGTTCTGGCCA 59.835 45.455 4.71 4.71 0.00 5.36
2058 2353 2.165437 TCTTTGTTTGTGTTCTGGCCAC 59.835 45.455 0.00 0.00 0.00 5.01
2059 2354 1.846007 TTGTTTGTGTTCTGGCCACT 58.154 45.000 0.00 0.00 33.92 4.00
2060 2355 1.846007 TGTTTGTGTTCTGGCCACTT 58.154 45.000 0.00 0.00 33.92 3.16
2061 2356 3.006112 TGTTTGTGTTCTGGCCACTTA 57.994 42.857 0.00 0.00 33.92 2.24
2062 2357 3.561143 TGTTTGTGTTCTGGCCACTTAT 58.439 40.909 0.00 0.00 33.92 1.73
2063 2358 3.317711 TGTTTGTGTTCTGGCCACTTATG 59.682 43.478 0.00 0.00 33.92 1.90
2064 2359 2.949177 TGTGTTCTGGCCACTTATGT 57.051 45.000 0.00 0.00 33.92 2.29
2065 2360 2.778299 TGTGTTCTGGCCACTTATGTC 58.222 47.619 0.00 0.00 33.92 3.06
2066 2361 1.732259 GTGTTCTGGCCACTTATGTCG 59.268 52.381 0.00 0.00 0.00 4.35
2067 2362 1.621317 TGTTCTGGCCACTTATGTCGA 59.379 47.619 0.00 0.00 0.00 4.20
2068 2363 2.236146 TGTTCTGGCCACTTATGTCGAT 59.764 45.455 0.00 0.00 0.00 3.59
2069 2364 3.270877 GTTCTGGCCACTTATGTCGATT 58.729 45.455 0.00 0.00 0.00 3.34
2070 2365 3.179443 TCTGGCCACTTATGTCGATTC 57.821 47.619 0.00 0.00 0.00 2.52
2071 2366 2.766263 TCTGGCCACTTATGTCGATTCT 59.234 45.455 0.00 0.00 0.00 2.40
2072 2367 2.868583 CTGGCCACTTATGTCGATTCTG 59.131 50.000 0.00 0.00 0.00 3.02
2077 2372 5.177696 GGCCACTTATGTCGATTCTGTTATC 59.822 44.000 0.00 0.00 0.00 1.75
2078 2373 5.753438 GCCACTTATGTCGATTCTGTTATCA 59.247 40.000 0.00 0.00 0.00 2.15
2082 2377 8.483218 CACTTATGTCGATTCTGTTATCACATC 58.517 37.037 0.00 0.00 33.03 3.06
2083 2378 8.197439 ACTTATGTCGATTCTGTTATCACATCA 58.803 33.333 0.00 0.00 33.03 3.07
2086 2381 6.572519 TGTCGATTCTGTTATCACATCATCA 58.427 36.000 0.00 0.00 30.39 3.07
2111 2406 9.383519 CATTCTGTAACATATACAGTGGAGTTT 57.616 33.333 13.56 0.00 43.84 2.66
2112 2407 8.997621 TTCTGTAACATATACAGTGGAGTTTC 57.002 34.615 13.56 0.00 43.84 2.78
2119 2414 9.905713 AACATATACAGTGGAGTTTCATTATGT 57.094 29.630 0.00 0.00 0.00 2.29
2162 2460 0.250295 TTCTTGTGCGGAAGACCAGG 60.250 55.000 0.00 0.00 31.53 4.45
2166 2464 0.534203 TGTGCGGAAGACCAGGAAAC 60.534 55.000 0.00 0.00 35.59 2.78
2173 2471 2.037381 GGAAGACCAGGAAACTCGAAGT 59.963 50.000 0.00 0.00 40.21 3.01
2174 2472 2.821991 AGACCAGGAAACTCGAAGTG 57.178 50.000 0.00 0.00 40.21 3.16
2177 2475 3.134081 AGACCAGGAAACTCGAAGTGAAA 59.866 43.478 0.00 0.00 40.21 2.69
2180 2478 5.617252 ACCAGGAAACTCGAAGTGAAAATA 58.383 37.500 0.00 0.00 40.21 1.40
2190 2488 9.706691 AACTCGAAGTGAAAATAGATTTAGTCA 57.293 29.630 0.00 0.00 0.00 3.41
2208 2506 3.776969 AGTCAGGTATCCATGTGATGTGT 59.223 43.478 6.87 0.00 34.76 3.72
2213 2511 3.118261 GGTATCCATGTGATGTGTGGAGT 60.118 47.826 6.87 0.00 44.59 3.85
2214 2512 2.768253 TCCATGTGATGTGTGGAGTC 57.232 50.000 0.00 0.00 37.12 3.36
2215 2513 1.977129 TCCATGTGATGTGTGGAGTCA 59.023 47.619 0.00 0.00 37.12 3.41
2216 2514 2.027837 TCCATGTGATGTGTGGAGTCAG 60.028 50.000 0.00 0.00 37.12 3.51
2234 2532 3.670991 GTCAGACAGACTCTAAGTTTGCG 59.329 47.826 0.00 0.00 44.09 4.85
2235 2533 3.318275 TCAGACAGACTCTAAGTTTGCGT 59.682 43.478 0.00 0.00 34.02 5.24
2236 2534 4.517832 TCAGACAGACTCTAAGTTTGCGTA 59.482 41.667 0.00 0.00 34.02 4.42
2237 2535 4.617645 CAGACAGACTCTAAGTTTGCGTAC 59.382 45.833 0.00 0.00 34.02 3.67
2240 2538 2.233186 AGACTCTAAGTTTGCGTACCCC 59.767 50.000 0.00 0.00 0.00 4.95
2241 2539 1.972795 ACTCTAAGTTTGCGTACCCCA 59.027 47.619 0.00 0.00 0.00 4.96
2242 2540 2.028385 ACTCTAAGTTTGCGTACCCCAG 60.028 50.000 0.00 0.00 0.00 4.45
2243 2541 2.232941 CTCTAAGTTTGCGTACCCCAGA 59.767 50.000 0.00 0.00 0.00 3.86
2245 2543 1.601166 AAGTTTGCGTACCCCAGAAC 58.399 50.000 0.00 0.00 0.00 3.01
2246 2544 0.470766 AGTTTGCGTACCCCAGAACA 59.529 50.000 0.00 0.00 0.00 3.18
2248 2546 1.883926 GTTTGCGTACCCCAGAACAAT 59.116 47.619 0.00 0.00 0.00 2.71
2249 2547 2.279935 TTGCGTACCCCAGAACAATT 57.720 45.000 0.00 0.00 0.00 2.32
2250 2548 2.279935 TGCGTACCCCAGAACAATTT 57.720 45.000 0.00 0.00 0.00 1.82
2251 2549 2.156098 TGCGTACCCCAGAACAATTTC 58.844 47.619 0.00 0.00 0.00 2.17
2252 2550 1.471287 GCGTACCCCAGAACAATTTCC 59.529 52.381 0.00 0.00 31.28 3.13
2253 2551 2.878526 GCGTACCCCAGAACAATTTCCT 60.879 50.000 0.00 0.00 31.28 3.36
2254 2552 3.007635 CGTACCCCAGAACAATTTCCTC 58.992 50.000 0.00 0.00 31.28 3.71
2255 2553 3.307480 CGTACCCCAGAACAATTTCCTCT 60.307 47.826 0.00 0.00 31.28 3.69
2256 2554 3.160679 ACCCCAGAACAATTTCCTCTG 57.839 47.619 2.49 2.49 37.03 3.35
2257 2555 2.716424 ACCCCAGAACAATTTCCTCTGA 59.284 45.455 8.96 0.00 39.15 3.27
2258 2556 3.245052 ACCCCAGAACAATTTCCTCTGAG 60.245 47.826 8.96 0.00 39.15 3.35
2259 2557 3.350833 CCCAGAACAATTTCCTCTGAGG 58.649 50.000 17.84 17.84 39.15 3.86
2260 2558 3.009473 CCCAGAACAATTTCCTCTGAGGA 59.991 47.826 22.30 22.30 44.10 3.71
2274 2572 5.718724 CTCTGAGGAAGAGCCAAAATTTT 57.281 39.130 0.00 0.00 45.93 1.82
2286 2584 3.433274 GCCAAAATTTTAGTGAGCTTGCC 59.567 43.478 2.44 0.00 0.00 4.52
2287 2585 4.630111 CCAAAATTTTAGTGAGCTTGCCA 58.370 39.130 2.44 0.00 0.00 4.92
2309 2607 4.020543 AGTTTATCTGGCGACTCTCTTCT 58.979 43.478 0.00 0.00 0.00 2.85
2310 2608 4.464597 AGTTTATCTGGCGACTCTCTTCTT 59.535 41.667 0.00 0.00 0.00 2.52
2311 2609 2.957491 ATCTGGCGACTCTCTTCTTG 57.043 50.000 0.00 0.00 0.00 3.02
2312 2610 0.244994 TCTGGCGACTCTCTTCTTGC 59.755 55.000 0.00 0.00 0.00 4.01
2313 2611 0.246086 CTGGCGACTCTCTTCTTGCT 59.754 55.000 0.00 0.00 0.00 3.91
2314 2612 1.474478 CTGGCGACTCTCTTCTTGCTA 59.526 52.381 0.00 0.00 0.00 3.49
2315 2613 1.474478 TGGCGACTCTCTTCTTGCTAG 59.526 52.381 0.00 0.00 0.00 3.42
2316 2614 1.202359 GGCGACTCTCTTCTTGCTAGG 60.202 57.143 0.00 0.00 0.00 3.02
2317 2615 1.746220 GCGACTCTCTTCTTGCTAGGA 59.254 52.381 0.00 0.00 0.00 2.94
2318 2616 2.164624 GCGACTCTCTTCTTGCTAGGAA 59.835 50.000 0.00 0.00 0.00 3.36
2319 2617 3.181480 GCGACTCTCTTCTTGCTAGGAAT 60.181 47.826 0.00 0.00 0.00 3.01
2320 2618 4.358851 CGACTCTCTTCTTGCTAGGAATG 58.641 47.826 0.00 0.00 0.00 2.67
2321 2619 4.142271 CGACTCTCTTCTTGCTAGGAATGT 60.142 45.833 0.00 0.00 0.00 2.71
2322 2620 5.623368 CGACTCTCTTCTTGCTAGGAATGTT 60.623 44.000 0.00 0.00 0.00 2.71
2339 2637 5.460091 GGAATGTTTTGCTTCAGTGAACTTC 59.540 40.000 0.08 0.00 0.00 3.01
2365 2663 5.555966 TGCTTGTGTTTATGTGATGGTAGA 58.444 37.500 0.00 0.00 0.00 2.59
2384 2682 2.642311 AGAGAGATCCTGGAGCGAGATA 59.358 50.000 6.27 0.00 0.00 1.98
2385 2683 3.266772 AGAGAGATCCTGGAGCGAGATAT 59.733 47.826 6.27 0.00 0.00 1.63
2387 2685 5.132648 AGAGAGATCCTGGAGCGAGATATAT 59.867 44.000 6.27 0.00 0.00 0.86
2388 2686 5.765510 AGAGATCCTGGAGCGAGATATATT 58.234 41.667 6.27 0.00 0.00 1.28
2389 2687 6.905736 AGAGATCCTGGAGCGAGATATATTA 58.094 40.000 6.27 0.00 0.00 0.98
2391 2689 7.284489 AGAGATCCTGGAGCGAGATATATTAAC 59.716 40.741 6.27 0.00 0.00 2.01
2392 2690 5.916661 TCCTGGAGCGAGATATATTAACC 57.083 43.478 0.00 0.00 0.00 2.85
2394 2692 5.419155 TCCTGGAGCGAGATATATTAACCTG 59.581 44.000 0.00 0.00 0.00 4.00
2395 2693 5.419155 CCTGGAGCGAGATATATTAACCTGA 59.581 44.000 0.00 0.00 0.00 3.86
2396 2694 6.097554 CCTGGAGCGAGATATATTAACCTGAT 59.902 42.308 0.00 0.00 0.00 2.90
2398 2696 7.907389 TGGAGCGAGATATATTAACCTGATTT 58.093 34.615 0.00 0.00 0.00 2.17
2399 2697 8.375506 TGGAGCGAGATATATTAACCTGATTTT 58.624 33.333 0.00 0.00 0.00 1.82
2400 2698 8.660373 GGAGCGAGATATATTAACCTGATTTTG 58.340 37.037 0.00 0.00 0.00 2.44
2401 2699 9.209175 GAGCGAGATATATTAACCTGATTTTGT 57.791 33.333 0.00 0.00 0.00 2.83
2402 2700 9.209175 AGCGAGATATATTAACCTGATTTTGTC 57.791 33.333 0.00 0.00 0.00 3.18
2403 2701 8.988934 GCGAGATATATTAACCTGATTTTGTCA 58.011 33.333 0.00 0.00 35.05 3.58
2409 2707 3.302365 AACCTGATTTTGTCAATGGCG 57.698 42.857 0.00 0.00 36.14 5.69
2433 2731 2.979130 GCACTGGCCTTCGTAGATC 58.021 57.895 3.32 0.00 35.04 2.75
2437 2735 0.596083 CTGGCCTTCGTAGATCGCTG 60.596 60.000 3.32 0.00 39.67 5.18
2479 2779 7.986320 TGATTTATCACATTTTTGGGGCTTATG 59.014 33.333 0.00 0.00 0.00 1.90
2491 2791 3.134081 TGGGGCTTATGAGTACTGCTTAC 59.866 47.826 0.00 0.00 0.00 2.34
2492 2792 3.134081 GGGGCTTATGAGTACTGCTTACA 59.866 47.826 0.00 0.00 32.41 2.41
2494 2794 4.120589 GGCTTATGAGTACTGCTTACACC 58.879 47.826 0.00 0.00 32.41 4.16
2495 2795 4.382685 GGCTTATGAGTACTGCTTACACCA 60.383 45.833 0.00 0.00 32.41 4.17
2496 2796 4.806247 GCTTATGAGTACTGCTTACACCAG 59.194 45.833 0.00 0.00 36.41 4.00
2497 2797 5.624738 GCTTATGAGTACTGCTTACACCAGT 60.625 44.000 0.00 0.00 44.99 4.00
2498 2798 4.891992 ATGAGTACTGCTTACACCAGTT 57.108 40.909 0.00 0.00 42.98 3.16
2499 2799 4.682778 TGAGTACTGCTTACACCAGTTT 57.317 40.909 0.00 0.00 42.98 2.66
2500 2800 4.377021 TGAGTACTGCTTACACCAGTTTG 58.623 43.478 0.00 0.00 42.98 2.93
2502 2802 4.632153 AGTACTGCTTACACCAGTTTGAG 58.368 43.478 0.00 0.00 42.98 3.02
2503 2803 2.222027 ACTGCTTACACCAGTTTGAGC 58.778 47.619 0.00 0.00 40.45 4.26
2505 2805 1.946768 TGCTTACACCAGTTTGAGCAC 59.053 47.619 0.00 0.00 34.34 4.40
2510 2810 2.653726 ACACCAGTTTGAGCACAATGA 58.346 42.857 0.00 0.00 35.85 2.57
2511 2811 3.225104 ACACCAGTTTGAGCACAATGAT 58.775 40.909 0.00 0.00 35.85 2.45
2512 2812 3.254166 ACACCAGTTTGAGCACAATGATC 59.746 43.478 0.00 0.00 35.85 2.92
2513 2813 3.504906 CACCAGTTTGAGCACAATGATCT 59.495 43.478 0.00 0.00 33.24 2.75
2514 2814 4.696877 CACCAGTTTGAGCACAATGATCTA 59.303 41.667 0.00 0.00 33.24 1.98
2515 2815 5.181811 CACCAGTTTGAGCACAATGATCTAA 59.818 40.000 0.00 0.00 33.24 2.10
2517 2817 6.127814 ACCAGTTTGAGCACAATGATCTAATG 60.128 38.462 0.00 0.00 33.24 1.90
2521 2864 8.043113 AGTTTGAGCACAATGATCTAATGACTA 58.957 33.333 0.00 0.00 33.24 2.59
2522 2865 7.776933 TTGAGCACAATGATCTAATGACTAC 57.223 36.000 0.00 0.00 33.24 2.73
2528 2871 7.404985 CACAATGATCTAATGACTACAGCAAC 58.595 38.462 0.00 0.00 0.00 4.17
2531 2874 5.582550 TGATCTAATGACTACAGCAACGAG 58.417 41.667 0.00 0.00 0.00 4.18
2547 2890 4.211374 GCAACGAGTACAACTTGAATCAGT 59.789 41.667 0.00 0.00 33.76 3.41
2548 2891 5.404366 GCAACGAGTACAACTTGAATCAGTA 59.596 40.000 0.00 0.00 33.76 2.74
2550 2893 6.328641 ACGAGTACAACTTGAATCAGTACT 57.671 37.500 11.30 11.30 45.65 2.73
2553 2896 7.174599 ACGAGTACAACTTGAATCAGTACTACT 59.825 37.037 11.41 7.22 43.73 2.57
2554 2897 8.663025 CGAGTACAACTTGAATCAGTACTACTA 58.337 37.037 11.41 0.00 43.73 1.82
2555 2898 9.991388 GAGTACAACTTGAATCAGTACTACTAG 57.009 37.037 11.41 0.00 43.73 2.57
2556 2899 9.736414 AGTACAACTTGAATCAGTACTACTAGA 57.264 33.333 10.18 0.00 42.39 2.43
2559 2902 8.524487 ACAACTTGAATCAGTACTACTAGAAGG 58.476 37.037 0.00 0.00 0.00 3.46
2564 2907 8.397575 TGAATCAGTACTACTAGAAGGCATAG 57.602 38.462 0.00 0.00 0.00 2.23
2565 2908 8.218488 TGAATCAGTACTACTAGAAGGCATAGA 58.782 37.037 0.00 0.00 0.00 1.98
2568 2911 9.899661 ATCAGTACTACTAGAAGGCATAGATAG 57.100 37.037 0.00 0.00 0.00 2.08
2569 2912 8.322828 TCAGTACTACTAGAAGGCATAGATAGG 58.677 40.741 0.00 0.00 0.00 2.57
2570 2913 7.554835 CAGTACTACTAGAAGGCATAGATAGGG 59.445 44.444 0.00 0.00 0.00 3.53
2571 2914 6.471942 ACTACTAGAAGGCATAGATAGGGT 57.528 41.667 0.00 0.00 0.00 4.34
2572 2915 6.486941 ACTACTAGAAGGCATAGATAGGGTC 58.513 44.000 0.00 0.00 0.00 4.46
2573 2916 5.340891 ACTAGAAGGCATAGATAGGGTCA 57.659 43.478 0.00 0.00 0.00 4.02
2575 2918 3.515562 AGAAGGCATAGATAGGGTCAGG 58.484 50.000 0.00 0.00 0.00 3.86
2576 2919 2.334006 AGGCATAGATAGGGTCAGGG 57.666 55.000 0.00 0.00 0.00 4.45
2578 2921 1.280457 GCATAGATAGGGTCAGGGGG 58.720 60.000 0.00 0.00 0.00 5.40
2580 2923 0.252284 ATAGATAGGGTCAGGGGGCG 60.252 60.000 0.00 0.00 0.00 6.13
2581 2924 2.382023 TAGATAGGGTCAGGGGGCGG 62.382 65.000 0.00 0.00 0.00 6.13
2592 2935 4.875713 GGGGCGGCCCTGTACATG 62.876 72.222 38.38 0.00 44.66 3.21
2593 2936 4.109675 GGGCGGCCCTGTACATGT 62.110 66.667 30.86 2.69 41.34 3.21
2595 2938 2.406616 GGCGGCCCTGTACATGTTG 61.407 63.158 8.12 0.00 0.00 3.33
2596 2939 2.406616 GCGGCCCTGTACATGTTGG 61.407 63.158 2.30 4.42 0.00 3.77
2598 2941 1.304052 GGCCCTGTACATGTTGGCA 60.304 57.895 22.05 11.88 43.96 4.92
2602 2945 1.812571 CCCTGTACATGTTGGCAACTC 59.187 52.381 28.71 14.87 37.61 3.01
2603 2946 1.812571 CCTGTACATGTTGGCAACTCC 59.187 52.381 28.71 13.36 37.61 3.85
2606 2949 2.235016 GTACATGTTGGCAACTCCCAA 58.765 47.619 28.71 10.68 42.37 4.12
2607 2950 2.014010 ACATGTTGGCAACTCCCAAT 57.986 45.000 28.71 12.52 45.86 3.16
2608 2951 3.168035 ACATGTTGGCAACTCCCAATA 57.832 42.857 28.71 9.21 45.86 1.90
2609 2952 3.505386 ACATGTTGGCAACTCCCAATAA 58.495 40.909 28.71 8.48 45.86 1.40
2610 2953 3.258123 ACATGTTGGCAACTCCCAATAAC 59.742 43.478 28.71 1.74 45.86 1.89
2612 2955 3.571590 TGTTGGCAACTCCCAATAACTT 58.428 40.909 28.71 0.00 45.86 2.66
2613 2956 3.572255 TGTTGGCAACTCCCAATAACTTC 59.428 43.478 28.71 0.00 45.86 3.01
2614 2957 3.517296 TGGCAACTCCCAATAACTTCA 57.483 42.857 0.00 0.00 37.61 3.02
2615 2958 3.420893 TGGCAACTCCCAATAACTTCAG 58.579 45.455 0.00 0.00 37.61 3.02
2616 2959 2.164422 GGCAACTCCCAATAACTTCAGC 59.836 50.000 0.00 0.00 0.00 4.26
2617 2960 2.159517 GCAACTCCCAATAACTTCAGCG 60.160 50.000 0.00 0.00 0.00 5.18
2620 2963 1.398390 CTCCCAATAACTTCAGCGTGC 59.602 52.381 0.00 0.00 0.00 5.34
2621 2964 0.451783 CCCAATAACTTCAGCGTGCC 59.548 55.000 0.00 0.00 0.00 5.01
2622 2965 1.453155 CCAATAACTTCAGCGTGCCT 58.547 50.000 0.00 0.00 0.00 4.75
2624 2967 3.006940 CCAATAACTTCAGCGTGCCTAA 58.993 45.455 0.00 0.00 0.00 2.69
2625 2968 3.627577 CCAATAACTTCAGCGTGCCTAAT 59.372 43.478 0.00 0.00 0.00 1.73
2626 2969 4.814234 CCAATAACTTCAGCGTGCCTAATA 59.186 41.667 0.00 0.00 0.00 0.98
2627 2970 5.470098 CCAATAACTTCAGCGTGCCTAATAT 59.530 40.000 0.00 0.00 0.00 1.28
2628 2971 6.347725 CCAATAACTTCAGCGTGCCTAATATC 60.348 42.308 0.00 0.00 0.00 1.63
2629 2972 2.743938 ACTTCAGCGTGCCTAATATCG 58.256 47.619 0.00 0.00 0.00 2.92
2630 2973 2.361119 ACTTCAGCGTGCCTAATATCGA 59.639 45.455 0.00 0.00 0.00 3.59
2631 2974 3.005897 ACTTCAGCGTGCCTAATATCGAT 59.994 43.478 2.16 2.16 0.00 3.59
2633 2976 4.092771 TCAGCGTGCCTAATATCGATAC 57.907 45.455 7.41 0.00 0.00 2.24
2635 2978 3.090037 AGCGTGCCTAATATCGATACCT 58.910 45.455 7.41 0.56 0.00 3.08
2636 2979 3.119459 AGCGTGCCTAATATCGATACCTG 60.119 47.826 7.41 0.61 0.00 4.00
2637 2980 3.119602 GCGTGCCTAATATCGATACCTGA 60.120 47.826 7.41 0.00 0.00 3.86
2639 2982 4.082949 CGTGCCTAATATCGATACCTGACA 60.083 45.833 7.41 1.37 0.00 3.58
2647 2990 2.276201 TCGATACCTGACAAAATGCGG 58.724 47.619 0.00 0.00 0.00 5.69
2648 2991 1.268032 CGATACCTGACAAAATGCGGC 60.268 52.381 0.00 0.00 0.00 6.53
2650 2993 1.832883 TACCTGACAAAATGCGGCAT 58.167 45.000 10.23 10.23 0.00 4.40
2651 2994 0.244450 ACCTGACAAAATGCGGCATG 59.756 50.000 17.43 8.44 0.00 4.06
2652 2995 0.458889 CCTGACAAAATGCGGCATGG 60.459 55.000 17.43 11.65 0.00 3.66
2654 2997 0.527113 TGACAAAATGCGGCATGGAG 59.473 50.000 17.43 11.28 0.00 3.86
2655 2998 0.803380 GACAAAATGCGGCATGGAGC 60.803 55.000 17.43 1.97 44.65 4.70
2665 3008 2.436646 CATGGAGCCGCGGAGTTT 60.437 61.111 33.48 10.89 0.00 2.66
2666 3009 2.436646 ATGGAGCCGCGGAGTTTG 60.437 61.111 33.48 0.01 0.00 2.93
2667 3010 3.254024 ATGGAGCCGCGGAGTTTGT 62.254 57.895 33.48 6.42 0.00 2.83
2674 3017 4.025401 GCGGAGTTTGTGCGGTGG 62.025 66.667 0.00 0.00 41.06 4.61
2675 3018 2.590575 CGGAGTTTGTGCGGTGGT 60.591 61.111 0.00 0.00 36.11 4.16
2676 3019 2.892334 CGGAGTTTGTGCGGTGGTG 61.892 63.158 0.00 0.00 36.11 4.17
2677 3020 2.551912 GGAGTTTGTGCGGTGGTGG 61.552 63.158 0.00 0.00 0.00 4.61
2678 3021 1.525077 GAGTTTGTGCGGTGGTGGA 60.525 57.895 0.00 0.00 0.00 4.02
2679 3022 0.889186 GAGTTTGTGCGGTGGTGGAT 60.889 55.000 0.00 0.00 0.00 3.41
2680 3023 0.467290 AGTTTGTGCGGTGGTGGATT 60.467 50.000 0.00 0.00 0.00 3.01
2682 3025 1.511318 TTTGTGCGGTGGTGGATTCG 61.511 55.000 0.00 0.00 0.00 3.34
2683 3026 3.124921 GTGCGGTGGTGGATTCGG 61.125 66.667 0.00 0.00 0.00 4.30
2688 3031 4.404098 GTGGTGGATTCGGGCGGT 62.404 66.667 0.00 0.00 0.00 5.68
2689 3032 4.402528 TGGTGGATTCGGGCGGTG 62.403 66.667 0.00 0.00 0.00 4.94
2691 3034 4.778143 GTGGATTCGGGCGGTGCT 62.778 66.667 0.00 0.00 0.00 4.40
2692 3035 4.776322 TGGATTCGGGCGGTGCTG 62.776 66.667 0.00 0.00 0.00 4.41
2695 3038 4.722700 ATTCGGGCGGTGCTGCTT 62.723 61.111 0.00 0.00 34.52 3.91
2704 3047 2.695314 GGTGCTGCTTCCGAATAGG 58.305 57.895 0.00 0.00 42.97 2.57
2705 3048 0.815615 GGTGCTGCTTCCGAATAGGG 60.816 60.000 0.00 0.00 41.52 3.53
2706 3049 1.153168 TGCTGCTTCCGAATAGGGC 60.153 57.895 0.00 0.00 41.52 5.19
2707 3050 2.247437 GCTGCTTCCGAATAGGGCG 61.247 63.158 0.00 0.00 41.52 6.13
2735 3078 2.125106 GGCTTCGAGGCGGTCATT 60.125 61.111 13.81 0.00 0.00 2.57
2736 3079 1.745489 GGCTTCGAGGCGGTCATTT 60.745 57.895 13.81 0.00 0.00 2.32
2737 3080 1.305930 GGCTTCGAGGCGGTCATTTT 61.306 55.000 13.81 0.00 0.00 1.82
2738 3081 0.521735 GCTTCGAGGCGGTCATTTTT 59.478 50.000 2.91 0.00 0.00 1.94
2739 3082 1.729149 GCTTCGAGGCGGTCATTTTTG 60.729 52.381 2.91 0.00 0.00 2.44
2740 3083 0.878416 TTCGAGGCGGTCATTTTTGG 59.122 50.000 0.00 0.00 0.00 3.28
2741 3084 1.154035 CGAGGCGGTCATTTTTGGC 60.154 57.895 0.00 0.00 0.00 4.52
2742 3085 1.215382 GAGGCGGTCATTTTTGGCC 59.785 57.895 0.00 0.00 44.07 5.36
2749 3092 2.345876 GGTCATTTTTGGCCGATTTGG 58.654 47.619 0.00 0.00 42.50 3.28
2750 3093 2.345876 GTCATTTTTGGCCGATTTGGG 58.654 47.619 0.00 0.00 38.63 4.12
2751 3094 1.277557 TCATTTTTGGCCGATTTGGGG 59.722 47.619 0.00 0.00 38.63 4.96
2752 3095 1.003003 CATTTTTGGCCGATTTGGGGT 59.997 47.619 0.00 0.00 38.63 4.95
2753 3096 0.682292 TTTTTGGCCGATTTGGGGTC 59.318 50.000 0.00 0.00 38.63 4.46
2754 3097 1.528292 TTTTGGCCGATTTGGGGTCG 61.528 55.000 0.00 0.00 38.63 4.79
2755 3098 2.700407 TTTGGCCGATTTGGGGTCGT 62.700 55.000 0.00 0.00 37.39 4.34
2756 3099 3.131478 GGCCGATTTGGGGTCGTG 61.131 66.667 0.00 0.00 37.39 4.35
2757 3100 2.046700 GCCGATTTGGGGTCGTGA 60.047 61.111 0.00 0.00 37.39 4.35
2758 3101 2.106683 GCCGATTTGGGGTCGTGAG 61.107 63.158 0.00 0.00 37.39 3.51
2759 3102 1.449601 CCGATTTGGGGTCGTGAGG 60.450 63.158 0.00 0.00 37.39 3.86
2760 3103 2.106683 CGATTTGGGGTCGTGAGGC 61.107 63.158 0.00 0.00 34.56 4.70
2761 3104 2.046314 ATTTGGGGTCGTGAGGCG 60.046 61.111 0.00 0.00 43.01 5.52
2762 3105 3.622060 ATTTGGGGTCGTGAGGCGG 62.622 63.158 0.00 0.00 41.72 6.13
2778 3121 4.324991 GGCGGGGAAGTGACGGTT 62.325 66.667 0.00 0.00 0.00 4.44
2779 3122 2.741211 GCGGGGAAGTGACGGTTC 60.741 66.667 0.00 0.00 0.00 3.62
2780 3123 2.047560 CGGGGAAGTGACGGTTCC 60.048 66.667 0.00 0.00 42.57 3.62
2781 3124 2.047560 GGGGAAGTGACGGTTCCG 60.048 66.667 9.81 9.81 44.01 4.30
2782 3125 2.047560 GGGAAGTGACGGTTCCGG 60.048 66.667 15.66 0.00 44.01 5.14
2783 3126 2.741211 GGAAGTGACGGTTCCGGC 60.741 66.667 15.66 13.23 34.40 6.13
2784 3127 3.110178 GAAGTGACGGTTCCGGCG 61.110 66.667 15.66 0.00 40.91 6.46
2785 3128 4.675029 AAGTGACGGTTCCGGCGG 62.675 66.667 22.51 22.51 40.91 6.13
2817 3160 2.619646 GTTTCGGCAGGAAGTTGGTTAA 59.380 45.455 0.00 0.00 35.70 2.01
2821 3164 2.808933 CGGCAGGAAGTTGGTTAACTGA 60.809 50.000 5.42 0.00 46.14 3.41
2823 3166 3.004419 GGCAGGAAGTTGGTTAACTGAAC 59.996 47.826 5.42 8.91 46.14 3.18
2825 3168 4.497507 GCAGGAAGTTGGTTAACTGAACAC 60.498 45.833 17.67 12.65 46.14 3.32
2837 3302 7.013750 TGGTTAACTGAACACATGAGCAAATTA 59.986 33.333 5.42 0.00 40.09 1.40
2838 3303 7.538678 GGTTAACTGAACACATGAGCAAATTAG 59.461 37.037 5.42 0.00 40.09 1.73
2839 3304 6.639632 AACTGAACACATGAGCAAATTAGT 57.360 33.333 0.00 0.00 0.00 2.24
2840 3305 6.005583 ACTGAACACATGAGCAAATTAGTG 57.994 37.500 0.00 0.00 0.00 2.74
2842 3307 6.262944 ACTGAACACATGAGCAAATTAGTGAA 59.737 34.615 0.00 0.00 0.00 3.18
2844 3309 6.486320 TGAACACATGAGCAAATTAGTGAAGA 59.514 34.615 0.00 0.00 0.00 2.87
2845 3310 6.882610 ACACATGAGCAAATTAGTGAAGAA 57.117 33.333 0.00 0.00 0.00 2.52
2846 3311 6.906659 ACACATGAGCAAATTAGTGAAGAAG 58.093 36.000 0.00 0.00 0.00 2.85
2847 3312 5.798934 CACATGAGCAAATTAGTGAAGAAGC 59.201 40.000 0.00 0.00 0.00 3.86
2848 3313 5.105997 ACATGAGCAAATTAGTGAAGAAGCC 60.106 40.000 0.00 0.00 0.00 4.35
2849 3314 3.436704 TGAGCAAATTAGTGAAGAAGCCG 59.563 43.478 0.00 0.00 0.00 5.52
2850 3315 3.412386 AGCAAATTAGTGAAGAAGCCGT 58.588 40.909 0.00 0.00 0.00 5.68
2852 3317 3.914364 GCAAATTAGTGAAGAAGCCGTTG 59.086 43.478 0.00 0.00 0.00 4.10
2853 3318 3.831715 AATTAGTGAAGAAGCCGTTGC 57.168 42.857 0.00 0.00 37.95 4.17
2854 3319 1.144969 TTAGTGAAGAAGCCGTTGCG 58.855 50.000 0.00 0.00 44.33 4.85
2856 3321 3.711842 TGAAGAAGCCGTTGCGCG 61.712 61.111 0.00 0.00 44.33 6.86
2870 3335 3.089784 CGCGCCGCTAGTTGAATT 58.910 55.556 7.78 0.00 0.00 2.17
2871 3336 1.296867 CGCGCCGCTAGTTGAATTG 60.297 57.895 7.78 0.00 0.00 2.32
2872 3337 1.794222 GCGCCGCTAGTTGAATTGT 59.206 52.632 0.00 0.00 0.00 2.71
2876 3341 1.933853 GCCGCTAGTTGAATTGTCGAT 59.066 47.619 0.00 0.00 0.00 3.59
2878 3343 2.930040 CCGCTAGTTGAATTGTCGATGT 59.070 45.455 0.00 0.00 0.00 3.06
2881 3346 4.143115 CGCTAGTTGAATTGTCGATGTTGT 60.143 41.667 0.00 0.00 0.00 3.32
2882 3347 5.082059 GCTAGTTGAATTGTCGATGTTGTG 58.918 41.667 0.00 0.00 0.00 3.33
2883 3348 5.334105 GCTAGTTGAATTGTCGATGTTGTGT 60.334 40.000 0.00 0.00 0.00 3.72
2884 3349 5.499139 AGTTGAATTGTCGATGTTGTGTT 57.501 34.783 0.00 0.00 0.00 3.32
2886 3351 4.891627 TGAATTGTCGATGTTGTGTTGT 57.108 36.364 0.00 0.00 0.00 3.32
2888 3353 4.095632 TGAATTGTCGATGTTGTGTTGTGT 59.904 37.500 0.00 0.00 0.00 3.72
2889 3354 3.397405 TTGTCGATGTTGTGTTGTGTG 57.603 42.857 0.00 0.00 0.00 3.82
2890 3355 2.351455 TGTCGATGTTGTGTTGTGTGT 58.649 42.857 0.00 0.00 0.00 3.72
2891 3356 2.744741 TGTCGATGTTGTGTTGTGTGTT 59.255 40.909 0.00 0.00 0.00 3.32
2892 3357 3.933332 TGTCGATGTTGTGTTGTGTGTTA 59.067 39.130 0.00 0.00 0.00 2.41
2893 3358 4.392138 TGTCGATGTTGTGTTGTGTGTTAA 59.608 37.500 0.00 0.00 0.00 2.01
2895 3360 4.032355 CGATGTTGTGTTGTGTGTTAACC 58.968 43.478 2.48 0.00 0.00 2.85
2896 3361 3.473093 TGTTGTGTTGTGTGTTAACCG 57.527 42.857 2.48 0.00 0.00 4.44
2898 3363 1.450025 TGTGTTGTGTGTTAACCGCA 58.550 45.000 2.48 4.81 0.00 5.69
2899 3364 1.398739 TGTGTTGTGTGTTAACCGCAG 59.601 47.619 2.48 0.00 33.31 5.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.392998 GAATCCCGCCACATCTGTGT 60.393 55.000 9.33 0.00 44.21 3.72
1 2 1.097547 GGAATCCCGCCACATCTGTG 61.098 60.000 3.28 3.28 45.23 3.66
2 3 1.224592 GGAATCCCGCCACATCTGT 59.775 57.895 0.00 0.00 0.00 3.41
12 13 3.064931 GGCGATAACTTTAGGAATCCCG 58.935 50.000 0.00 0.00 37.58 5.14
33 34 2.474816 GCGAAGAGTTGGCCTATAGTG 58.525 52.381 3.32 0.00 0.00 2.74
58 59 6.378280 CAGTAGAAACCTCCATTGGCTATTTT 59.622 38.462 0.00 0.00 0.00 1.82
60 61 5.440610 CAGTAGAAACCTCCATTGGCTATT 58.559 41.667 0.00 0.00 0.00 1.73
62 63 3.199946 CCAGTAGAAACCTCCATTGGCTA 59.800 47.826 0.00 0.00 0.00 3.93
63 64 2.025887 CCAGTAGAAACCTCCATTGGCT 60.026 50.000 0.00 0.00 0.00 4.75
68 75 1.082194 TCCCCCAGTAGAAACCTCCAT 59.918 52.381 0.00 0.00 0.00 3.41
69 76 0.494551 TCCCCCAGTAGAAACCTCCA 59.505 55.000 0.00 0.00 0.00 3.86
70 77 1.490910 CATCCCCCAGTAGAAACCTCC 59.509 57.143 0.00 0.00 0.00 4.30
72 79 2.197465 GACATCCCCCAGTAGAAACCT 58.803 52.381 0.00 0.00 0.00 3.50
73 80 2.197465 AGACATCCCCCAGTAGAAACC 58.803 52.381 0.00 0.00 0.00 3.27
75 82 5.729229 TGAAATAGACATCCCCCAGTAGAAA 59.271 40.000 0.00 0.00 0.00 2.52
76 83 5.285401 TGAAATAGACATCCCCCAGTAGAA 58.715 41.667 0.00 0.00 0.00 2.10
77 84 4.890988 TGAAATAGACATCCCCCAGTAGA 58.109 43.478 0.00 0.00 0.00 2.59
78 85 4.503991 GCTGAAATAGACATCCCCCAGTAG 60.504 50.000 0.00 0.00 0.00 2.57
79 86 3.391296 GCTGAAATAGACATCCCCCAGTA 59.609 47.826 0.00 0.00 0.00 2.74
80 87 2.173569 GCTGAAATAGACATCCCCCAGT 59.826 50.000 0.00 0.00 0.00 4.00
81 88 2.487986 GGCTGAAATAGACATCCCCCAG 60.488 54.545 0.00 0.00 33.23 4.45
82 89 1.494721 GGCTGAAATAGACATCCCCCA 59.505 52.381 0.00 0.00 33.23 4.96
83 90 1.494721 TGGCTGAAATAGACATCCCCC 59.505 52.381 0.00 0.00 40.34 5.40
89 96 8.801299 TCATTAATTTTGTGGCTGAAATAGACA 58.199 29.630 0.00 0.00 44.00 3.41
96 103 5.306678 ACCCTTCATTAATTTTGTGGCTGAA 59.693 36.000 0.00 0.00 0.00 3.02
108 115 9.872684 AAGTCATCATTCATACCCTTCATTAAT 57.127 29.630 0.00 0.00 0.00 1.40
111 118 9.872684 ATAAAGTCATCATTCATACCCTTCATT 57.127 29.630 0.00 0.00 0.00 2.57
112 119 9.293404 CATAAAGTCATCATTCATACCCTTCAT 57.707 33.333 0.00 0.00 0.00 2.57
123 130 5.841957 ACTTGCCCATAAAGTCATCATTC 57.158 39.130 0.00 0.00 32.36 2.67
139 146 1.671379 GGTCGGTCTCCAACTTGCC 60.671 63.158 0.00 0.00 0.00 4.52
156 163 3.192633 CCCTTAAATTGTGAAACCCTCGG 59.807 47.826 0.00 0.00 34.36 4.63
158 165 5.952347 AGATCCCTTAAATTGTGAAACCCTC 59.048 40.000 0.00 0.00 34.36 4.30
170 177 9.372189 CCATCCAAGAAAATAGATCCCTTAAAT 57.628 33.333 0.00 0.00 0.00 1.40
196 203 3.935828 GAGCAACCATCAAAGTAGGACTC 59.064 47.826 0.00 0.00 0.00 3.36
234 241 7.870445 GGGAAGATTGTCAGATAGAAGATACAC 59.130 40.741 0.00 0.00 0.00 2.90
240 247 5.508825 CGGAGGGAAGATTGTCAGATAGAAG 60.509 48.000 0.00 0.00 0.00 2.85
250 257 1.003233 GTGGTTCGGAGGGAAGATTGT 59.997 52.381 0.00 0.00 34.69 2.71
264 271 3.311596 GCCGATACCTTATGTTGTGGTTC 59.688 47.826 0.00 0.00 35.48 3.62
265 272 3.275999 GCCGATACCTTATGTTGTGGTT 58.724 45.455 0.00 0.00 35.48 3.67
273 280 3.619483 TCAACAAACGCCGATACCTTATG 59.381 43.478 0.00 0.00 0.00 1.90
280 287 1.342555 CGTCTCAACAAACGCCGATA 58.657 50.000 0.00 0.00 31.48 2.92
282 289 1.952133 CCGTCTCAACAAACGCCGA 60.952 57.895 0.00 0.00 37.56 5.54
287 294 2.604614 GCAATCCACCGTCTCAACAAAC 60.605 50.000 0.00 0.00 0.00 2.93
313 320 6.291377 CACTATATGTGTCCCTGCAATAACT 58.709 40.000 0.00 0.00 41.53 2.24
342 349 0.826715 TCTTCCCATTCTCCTCTGCG 59.173 55.000 0.00 0.00 0.00 5.18
363 370 3.621715 AGTTGACGAGTTCCAAGAACAAC 59.378 43.478 9.92 0.00 37.30 3.32
383 390 5.711506 TGACATTGTTGGATTATGCTCAAGT 59.288 36.000 0.00 0.00 0.00 3.16
408 415 7.888546 ACTTTGTATAGGTACTTCATTGCCTTT 59.111 33.333 0.00 0.00 41.75 3.11
430 437 9.696917 GTATTCATGAAAGAAACCATTGACTTT 57.303 29.630 13.09 0.00 35.68 2.66
470 477 9.178758 GTATGAAGACAAGGTTATCTTCCATTT 57.821 33.333 8.01 0.00 46.89 2.32
480 487 4.081862 CCGTCCAGTATGAAGACAAGGTTA 60.082 45.833 0.00 0.00 39.69 2.85
493 500 1.743772 GCTGCAATGTCCGTCCAGTAT 60.744 52.381 0.00 0.00 0.00 2.12
494 501 0.391130 GCTGCAATGTCCGTCCAGTA 60.391 55.000 0.00 0.00 0.00 2.74
501 508 0.877071 AGTTCAAGCTGCAATGTCCG 59.123 50.000 1.02 0.00 0.00 4.79
504 511 0.239347 GCGAGTTCAAGCTGCAATGT 59.761 50.000 1.02 0.00 0.00 2.71
505 512 0.239082 TGCGAGTTCAAGCTGCAATG 59.761 50.000 1.02 0.21 31.69 2.82
514 521 3.064207 GTCCTGTATGTTGCGAGTTCAA 58.936 45.455 0.00 0.00 0.00 2.69
515 522 2.036604 TGTCCTGTATGTTGCGAGTTCA 59.963 45.455 0.00 0.00 0.00 3.18
529 536 4.323792 CCTTATGGTGAGATGTTGTCCTGT 60.324 45.833 0.00 0.00 0.00 4.00
534 541 3.200825 CCCTCCTTATGGTGAGATGTTGT 59.799 47.826 0.00 0.00 34.23 3.32
557 564 1.078143 GTGATGTCCCTGTCCCAGC 60.078 63.158 0.00 0.00 0.00 4.85
586 593 2.329339 GCGCGAGAAATCCATGCC 59.671 61.111 12.10 0.00 0.00 4.40
682 689 4.439057 TCTAGAATATTTGTGTCCGCCAC 58.561 43.478 0.00 0.00 44.78 5.01
694 701 7.568349 TGCTCAAGGTCAACATCTAGAATATT 58.432 34.615 0.00 0.00 0.00 1.28
695 702 7.070447 TCTGCTCAAGGTCAACATCTAGAATAT 59.930 37.037 0.00 0.00 0.00 1.28
699 709 4.089361 TCTGCTCAAGGTCAACATCTAGA 58.911 43.478 0.00 0.00 0.00 2.43
707 717 1.202915 TGCCAATCTGCTCAAGGTCAA 60.203 47.619 0.00 0.00 0.00 3.18
726 736 9.138046 AGGAACTTAAGACGAGGTAGAACCTTG 62.138 44.444 10.09 11.15 44.12 3.61
732 742 5.045724 AGAGAGGAACTTAAGACGAGGTAGA 60.046 44.000 10.09 0.00 41.55 2.59
759 769 2.093447 ACTTATCTCTTTGCACCCTCGG 60.093 50.000 0.00 0.00 0.00 4.63
765 775 6.341316 TGGTAGATGACTTATCTCTTTGCAC 58.659 40.000 0.00 0.00 42.54 4.57
780 790 4.405680 ACACCGAATCATTCTGGTAGATGA 59.594 41.667 11.92 0.00 35.73 2.92
794 804 0.460987 CTGCCTCAGGACACCGAATC 60.461 60.000 0.00 0.00 0.00 2.52
803 813 1.601759 GTTTGCAGCTGCCTCAGGA 60.602 57.895 34.64 13.43 41.18 3.86
835 845 2.370281 AGCGTGACTATTGAGGTGTG 57.630 50.000 0.00 0.00 0.00 3.82
851 861 3.436700 TGATGATACACAGTGGTAGCG 57.563 47.619 5.31 0.00 32.49 4.26
859 869 8.438513 CAACTTCTGTAACTTGATGATACACAG 58.561 37.037 0.00 0.00 31.90 3.66
865 875 6.882610 TTGCAACTTCTGTAACTTGATGAT 57.117 33.333 0.00 0.00 0.00 2.45
874 884 6.598525 CACGAATGTATTGCAACTTCTGTAA 58.401 36.000 0.00 0.00 33.84 2.41
900 910 1.423721 CCGATGATATGATGGCGCCG 61.424 60.000 23.90 4.48 0.00 6.46
904 914 3.196469 TCTTCCTCCGATGATATGATGGC 59.804 47.826 0.00 0.00 0.00 4.40
921 931 3.071479 TGCAACGGAGTAATTGTCTTCC 58.929 45.455 0.00 0.00 45.00 3.46
928 938 3.749609 GGTGTACTTGCAACGGAGTAATT 59.250 43.478 0.00 0.00 45.00 1.40
936 946 2.159503 TGTTGTTGGTGTACTTGCAACG 60.160 45.455 0.00 0.00 39.02 4.10
947 957 4.578516 TCCAGTCTACATTTGTTGTTGGTG 59.421 41.667 13.27 0.00 39.87 4.17
967 977 2.125952 CAGCTGCGTCGATGTCCA 60.126 61.111 0.00 0.00 0.00 4.02
993 1003 6.402875 CCAGTAGTGTTGTGATCATGTCATTG 60.403 42.308 0.00 0.00 39.48 2.82
994 1004 5.645067 CCAGTAGTGTTGTGATCATGTCATT 59.355 40.000 0.00 0.00 39.48 2.57
1003 1013 7.450074 TCTGTTATTTCCAGTAGTGTTGTGAT 58.550 34.615 0.00 0.00 0.00 3.06
1016 1026 4.844085 TCTGAACCTCCTCTGTTATTTCCA 59.156 41.667 0.00 0.00 0.00 3.53
1022 1032 4.416516 TGATGTCTGAACCTCCTCTGTTA 58.583 43.478 0.00 0.00 0.00 2.41
1057 1307 2.202987 GGATGGCTGACAGCTCCG 60.203 66.667 25.92 0.00 41.99 4.63
1065 1315 1.296392 CACCGAACAGGATGGCTGA 59.704 57.895 0.00 0.00 45.00 4.26
1067 1317 1.194781 AGACACCGAACAGGATGGCT 61.195 55.000 0.00 0.00 45.00 4.75
1074 1324 0.603569 ACCAGCTAGACACCGAACAG 59.396 55.000 0.00 0.00 0.00 3.16
1075 1325 1.045407 AACCAGCTAGACACCGAACA 58.955 50.000 0.00 0.00 0.00 3.18
1079 1329 1.754803 TGGATAACCAGCTAGACACCG 59.245 52.381 0.00 0.00 41.77 4.94
1110 1360 1.800586 CCATCATTATCAAGTCGGCGG 59.199 52.381 7.21 0.00 0.00 6.13
1155 1405 0.623194 TATGCAAGGCCACCAAGCTA 59.377 50.000 5.01 0.00 0.00 3.32
1162 1412 0.461135 CCAATGGTATGCAAGGCCAC 59.539 55.000 5.01 0.00 34.84 5.01
1163 1413 0.040942 ACCAATGGTATGCAAGGCCA 59.959 50.000 1.52 9.23 32.11 5.36
1176 1426 3.666274 ATTGGCATTGACAACACCAATG 58.334 40.909 25.19 10.48 46.62 2.82
1212 1462 6.828785 GGTTCTTAATCTCCTTTAGGATTGCA 59.171 38.462 0.00 0.00 44.46 4.08
1228 1478 4.083484 GCGCAGTTGTGTAAGGTTCTTAAT 60.083 41.667 0.30 0.00 0.00 1.40
1319 1570 0.615331 TGACAAGGACTCCAGATGGC 59.385 55.000 0.00 0.00 34.44 4.40
1365 1631 7.537715 TCATGTCATCGAAACAAGCAAATAAT 58.462 30.769 7.93 0.00 0.00 1.28
1382 1648 2.381911 GTGGCTGGGAAATCATGTCAT 58.618 47.619 0.00 0.00 0.00 3.06
1498 1764 8.976471 CATGTCTTCTTGCAATAGTATAGTGAG 58.024 37.037 0.00 0.00 39.37 3.51
1500 1766 7.225341 TGCATGTCTTCTTGCAATAGTATAGTG 59.775 37.037 0.00 0.00 46.55 2.74
1514 1780 3.152341 CCAAGGAACTGCATGTCTTCTT 58.848 45.455 0.00 0.00 40.86 2.52
1527 1793 6.655078 ATATATGGCAATTCACCAAGGAAC 57.345 37.500 0.00 0.00 41.49 3.62
1546 1812 8.786898 ACAAAGGCGACGTAAGAAGTATATATA 58.213 33.333 0.00 0.00 43.62 0.86
1554 1820 2.096909 CACACAAAGGCGACGTAAGAAG 60.097 50.000 0.00 0.00 43.62 2.85
1575 1841 2.632377 TCACCATCTTGAATCGGCTTC 58.368 47.619 0.00 0.00 0.00 3.86
1625 1891 3.442076 AGGACCTGTAATCTCCGAAAGT 58.558 45.455 0.00 0.00 0.00 2.66
1630 1896 4.088056 TCTCTAGGACCTGTAATCTCCG 57.912 50.000 3.53 0.00 0.00 4.63
1687 1953 9.823647 CACCTCAACTCTCATACAAATATTACT 57.176 33.333 0.00 0.00 0.00 2.24
1688 1954 8.552034 GCACCTCAACTCTCATACAAATATTAC 58.448 37.037 0.00 0.00 0.00 1.89
1693 1959 4.940046 CAGCACCTCAACTCTCATACAAAT 59.060 41.667 0.00 0.00 0.00 2.32
1695 1961 3.578282 TCAGCACCTCAACTCTCATACAA 59.422 43.478 0.00 0.00 0.00 2.41
1697 1963 3.876274 TCAGCACCTCAACTCTCATAC 57.124 47.619 0.00 0.00 0.00 2.39
1699 1965 2.902486 TCTTCAGCACCTCAACTCTCAT 59.098 45.455 0.00 0.00 0.00 2.90
1700 1966 2.319844 TCTTCAGCACCTCAACTCTCA 58.680 47.619 0.00 0.00 0.00 3.27
1703 1969 3.434984 GTGAATCTTCAGCACCTCAACTC 59.565 47.826 0.00 0.00 37.98 3.01
1706 1972 3.405831 CAGTGAATCTTCAGCACCTCAA 58.594 45.455 0.00 0.00 37.98 3.02
1735 2001 1.303317 AAATCCGCAAAGACGCCCT 60.303 52.632 0.00 0.00 0.00 5.19
1765 2031 5.886474 ACACTTCATCGAGACCACTTAGATA 59.114 40.000 0.00 0.00 0.00 1.98
1780 2046 2.863809 ACCCTTCAACCACACTTCATC 58.136 47.619 0.00 0.00 0.00 2.92
1782 2048 2.650322 GAACCCTTCAACCACACTTCA 58.350 47.619 0.00 0.00 0.00 3.02
1792 2058 1.281419 TCGCCATAGGAACCCTTCAA 58.719 50.000 0.00 0.00 34.61 2.69
1855 2121 1.884235 AGCTTCAGGACAGGTTTTCG 58.116 50.000 0.00 0.00 0.00 3.46
1880 2146 0.385723 CTATAAGGACGAGCGTCGCC 60.386 60.000 14.86 4.55 45.12 5.54
1895 2161 2.325484 TGAATTGCCGGAGAGCCTATA 58.675 47.619 5.05 0.00 0.00 1.31
1906 2172 5.401550 ACAGAAATAACACATGAATTGCCG 58.598 37.500 0.00 0.00 0.00 5.69
1907 2173 7.538575 AGTACAGAAATAACACATGAATTGCC 58.461 34.615 0.00 0.00 0.00 4.52
1908 2174 8.853345 CAAGTACAGAAATAACACATGAATTGC 58.147 33.333 0.00 0.00 0.00 3.56
1940 2224 3.771577 ACTCCCACAGGACTTGTTAAG 57.228 47.619 0.00 0.00 38.16 1.85
1941 2225 4.019681 CCATACTCCCACAGGACTTGTTAA 60.020 45.833 0.00 0.00 38.16 2.01
1955 2244 1.678101 GCAATGCAGAACCATACTCCC 59.322 52.381 0.00 0.00 0.00 4.30
1963 2256 0.726827 TCGATTCGCAATGCAGAACC 59.273 50.000 5.91 0.03 0.00 3.62
1977 2270 5.965922 TCATACATGAGTGTGAAGTCGATT 58.034 37.500 0.00 0.00 42.01 3.34
1985 2280 5.482006 CCAGAAGTTCATACATGAGTGTGA 58.518 41.667 5.50 0.00 43.05 3.58
1989 2284 4.558226 TGCCAGAAGTTCATACATGAGT 57.442 40.909 5.50 0.00 38.19 3.41
1991 2286 6.484364 TCTATGCCAGAAGTTCATACATGA 57.516 37.500 5.50 3.74 34.44 3.07
1992 2287 7.558161 TTTCTATGCCAGAAGTTCATACATG 57.442 36.000 5.50 0.00 44.10 3.21
2011 2306 8.251026 ACAGACATCACACGAGAAATATTTCTA 58.749 33.333 26.76 13.29 46.84 2.10
2017 2312 5.644977 AGACAGACATCACACGAGAAATA 57.355 39.130 0.00 0.00 0.00 1.40
2018 2313 4.527509 AGACAGACATCACACGAGAAAT 57.472 40.909 0.00 0.00 0.00 2.17
2019 2314 4.322080 AAGACAGACATCACACGAGAAA 57.678 40.909 0.00 0.00 0.00 2.52
2024 2319 4.201812 ACAAACAAAGACAGACATCACACG 60.202 41.667 0.00 0.00 0.00 4.49
2029 2324 5.967674 CAGAACACAAACAAAGACAGACATC 59.032 40.000 0.00 0.00 0.00 3.06
2030 2325 5.163622 CCAGAACACAAACAAAGACAGACAT 60.164 40.000 0.00 0.00 0.00 3.06
2032 2327 4.662145 CCAGAACACAAACAAAGACAGAC 58.338 43.478 0.00 0.00 0.00 3.51
2034 2329 3.438360 GCCAGAACACAAACAAAGACAG 58.562 45.455 0.00 0.00 0.00 3.51
2035 2330 2.165437 GGCCAGAACACAAACAAAGACA 59.835 45.455 0.00 0.00 0.00 3.41
2036 2331 2.165437 TGGCCAGAACACAAACAAAGAC 59.835 45.455 0.00 0.00 0.00 3.01
2037 2332 2.165437 GTGGCCAGAACACAAACAAAGA 59.835 45.455 5.11 0.00 38.67 2.52
2038 2333 2.166254 AGTGGCCAGAACACAAACAAAG 59.834 45.455 5.11 0.00 41.21 2.77
2039 2334 2.175202 AGTGGCCAGAACACAAACAAA 58.825 42.857 5.11 0.00 41.21 2.83
2040 2335 1.846007 AGTGGCCAGAACACAAACAA 58.154 45.000 5.11 0.00 41.21 2.83
2041 2336 1.846007 AAGTGGCCAGAACACAAACA 58.154 45.000 5.11 0.00 41.21 2.83
2042 2337 3.317993 ACATAAGTGGCCAGAACACAAAC 59.682 43.478 5.11 0.00 41.21 2.93
2043 2338 3.561143 ACATAAGTGGCCAGAACACAAA 58.439 40.909 5.11 0.00 41.21 2.83
2044 2339 3.146066 GACATAAGTGGCCAGAACACAA 58.854 45.455 5.11 0.00 41.21 3.33
2045 2340 2.778299 GACATAAGTGGCCAGAACACA 58.222 47.619 5.11 0.00 41.21 3.72
2046 2341 1.732259 CGACATAAGTGGCCAGAACAC 59.268 52.381 5.11 0.00 39.10 3.32
2047 2342 1.621317 TCGACATAAGTGGCCAGAACA 59.379 47.619 5.11 0.00 0.00 3.18
2048 2343 2.380084 TCGACATAAGTGGCCAGAAC 57.620 50.000 5.11 0.00 0.00 3.01
2049 2344 3.197766 AGAATCGACATAAGTGGCCAGAA 59.802 43.478 5.11 0.00 0.00 3.02
2050 2345 2.766263 AGAATCGACATAAGTGGCCAGA 59.234 45.455 5.11 0.00 0.00 3.86
2051 2346 2.868583 CAGAATCGACATAAGTGGCCAG 59.131 50.000 5.11 0.00 0.00 4.85
2052 2347 2.236146 ACAGAATCGACATAAGTGGCCA 59.764 45.455 0.00 0.00 0.00 5.36
2053 2348 2.906354 ACAGAATCGACATAAGTGGCC 58.094 47.619 0.00 0.00 0.00 5.36
2054 2349 5.753438 TGATAACAGAATCGACATAAGTGGC 59.247 40.000 0.00 0.00 0.00 5.01
2055 2350 6.756542 TGTGATAACAGAATCGACATAAGTGG 59.243 38.462 0.00 0.00 0.00 4.00
2056 2351 7.755582 TGTGATAACAGAATCGACATAAGTG 57.244 36.000 0.00 0.00 0.00 3.16
2057 2352 8.197439 TGATGTGATAACAGAATCGACATAAGT 58.803 33.333 0.00 0.00 32.59 2.24
2058 2353 8.579682 TGATGTGATAACAGAATCGACATAAG 57.420 34.615 0.00 0.00 32.59 1.73
2059 2354 9.196552 GATGATGTGATAACAGAATCGACATAA 57.803 33.333 0.00 0.00 32.59 1.90
2060 2355 8.359642 TGATGATGTGATAACAGAATCGACATA 58.640 33.333 0.00 0.00 32.59 2.29
2061 2356 7.212274 TGATGATGTGATAACAGAATCGACAT 58.788 34.615 0.00 0.00 33.86 3.06
2062 2357 6.572519 TGATGATGTGATAACAGAATCGACA 58.427 36.000 0.00 0.00 0.00 4.35
2063 2358 7.649370 ATGATGATGTGATAACAGAATCGAC 57.351 36.000 0.00 0.00 0.00 4.20
2064 2359 8.146412 AGAATGATGATGTGATAACAGAATCGA 58.854 33.333 0.00 0.00 0.00 3.59
2065 2360 8.221766 CAGAATGATGATGTGATAACAGAATCG 58.778 37.037 0.00 0.00 39.69 3.34
2066 2361 9.053840 ACAGAATGATGATGTGATAACAGAATC 57.946 33.333 0.00 0.00 39.69 2.52
2067 2362 8.975663 ACAGAATGATGATGTGATAACAGAAT 57.024 30.769 0.00 0.00 39.69 2.40
2068 2363 9.889128 TTACAGAATGATGATGTGATAACAGAA 57.111 29.630 0.00 0.00 39.69 3.02
2069 2364 9.317936 GTTACAGAATGATGATGTGATAACAGA 57.682 33.333 0.00 0.00 39.69 3.41
2070 2365 9.101655 TGTTACAGAATGATGATGTGATAACAG 57.898 33.333 0.00 0.00 39.69 3.16
2071 2366 9.617523 ATGTTACAGAATGATGATGTGATAACA 57.382 29.630 0.00 0.00 39.69 2.41
2082 2377 9.201127 CTCCACTGTATATGTTACAGAATGATG 57.799 37.037 19.03 9.76 45.69 3.07
2083 2378 8.928448 ACTCCACTGTATATGTTACAGAATGAT 58.072 33.333 19.03 4.66 45.69 2.45
2086 2381 9.601217 GAAACTCCACTGTATATGTTACAGAAT 57.399 33.333 19.03 0.00 45.69 2.40
2135 2433 4.441087 GTCTTCCGCACAAGAAACAATTTC 59.559 41.667 0.00 0.00 39.96 2.17
2146 2444 0.181587 TTTCCTGGTCTTCCGCACAA 59.818 50.000 0.00 0.00 36.30 3.33
2149 2447 0.034896 GAGTTTCCTGGTCTTCCGCA 59.965 55.000 0.00 0.00 36.30 5.69
2166 2464 8.812329 CCTGACTAAATCTATTTTCACTTCGAG 58.188 37.037 0.00 0.00 0.00 4.04
2177 2475 9.159254 TCACATGGATACCTGACTAAATCTATT 57.841 33.333 0.00 0.00 35.94 1.73
2180 2478 7.071698 ACATCACATGGATACCTGACTAAATCT 59.928 37.037 0.00 0.00 35.94 2.40
2189 2487 3.118298 TCCACACATCACATGGATACCTG 60.118 47.826 0.00 0.00 37.60 4.00
2190 2488 3.114606 TCCACACATCACATGGATACCT 58.885 45.455 0.00 0.00 37.60 3.08
2196 2494 2.027837 TCTGACTCCACACATCACATGG 60.028 50.000 0.00 0.00 34.58 3.66
2213 2511 3.318275 ACGCAAACTTAGAGTCTGTCTGA 59.682 43.478 1.86 0.00 36.64 3.27
2214 2512 3.643763 ACGCAAACTTAGAGTCTGTCTG 58.356 45.455 1.86 0.00 36.64 3.51
2215 2513 4.321082 GGTACGCAAACTTAGAGTCTGTCT 60.321 45.833 1.86 0.00 39.59 3.41
2216 2514 3.919197 GGTACGCAAACTTAGAGTCTGTC 59.081 47.826 1.86 0.00 0.00 3.51
2233 2531 3.007635 GAGGAAATTGTTCTGGGGTACG 58.992 50.000 0.00 0.00 33.92 3.67
2234 2532 4.010349 CAGAGGAAATTGTTCTGGGGTAC 58.990 47.826 6.32 0.00 35.75 3.34
2235 2533 3.913799 TCAGAGGAAATTGTTCTGGGGTA 59.086 43.478 11.82 0.00 39.01 3.69
2236 2534 2.716424 TCAGAGGAAATTGTTCTGGGGT 59.284 45.455 11.82 0.00 39.01 4.95
2237 2535 3.350833 CTCAGAGGAAATTGTTCTGGGG 58.649 50.000 11.82 4.91 39.01 4.96
2253 2551 6.207417 CACTAAAATTTTGGCTCTTCCTCAGA 59.793 38.462 13.76 0.00 35.26 3.27
2254 2552 6.207417 TCACTAAAATTTTGGCTCTTCCTCAG 59.793 38.462 13.76 1.02 35.26 3.35
2255 2553 6.068010 TCACTAAAATTTTGGCTCTTCCTCA 58.932 36.000 13.76 0.00 35.26 3.86
2256 2554 6.575162 TCACTAAAATTTTGGCTCTTCCTC 57.425 37.500 13.76 0.00 35.26 3.71
2257 2555 5.047731 GCTCACTAAAATTTTGGCTCTTCCT 60.048 40.000 13.76 0.00 35.26 3.36
2258 2556 5.047731 AGCTCACTAAAATTTTGGCTCTTCC 60.048 40.000 13.76 0.00 0.00 3.46
2259 2557 6.018589 AGCTCACTAAAATTTTGGCTCTTC 57.981 37.500 13.76 0.82 0.00 2.87
2260 2558 6.218746 CAAGCTCACTAAAATTTTGGCTCTT 58.781 36.000 13.76 8.78 0.00 2.85
2261 2559 5.776744 CAAGCTCACTAAAATTTTGGCTCT 58.223 37.500 13.76 3.58 0.00 4.09
2262 2560 4.386954 GCAAGCTCACTAAAATTTTGGCTC 59.613 41.667 13.76 1.46 0.00 4.70
2263 2561 4.309933 GCAAGCTCACTAAAATTTTGGCT 58.690 39.130 13.76 11.19 0.00 4.75
2264 2562 3.433274 GGCAAGCTCACTAAAATTTTGGC 59.567 43.478 13.76 9.37 33.55 4.52
2265 2563 4.630111 TGGCAAGCTCACTAAAATTTTGG 58.370 39.130 13.76 12.99 0.00 3.28
2266 2564 5.291971 ACTGGCAAGCTCACTAAAATTTTG 58.708 37.500 13.76 6.30 0.00 2.44
2267 2565 5.535753 ACTGGCAAGCTCACTAAAATTTT 57.464 34.783 8.75 8.75 0.00 1.82
2268 2566 5.535753 AACTGGCAAGCTCACTAAAATTT 57.464 34.783 0.00 0.00 0.00 1.82
2274 2572 4.507710 CAGATAAACTGGCAAGCTCACTA 58.492 43.478 0.00 0.00 42.39 2.74
2286 2584 3.791973 AGAGAGTCGCCAGATAAACTG 57.208 47.619 0.00 0.00 45.36 3.16
2287 2585 4.020543 AGAAGAGAGTCGCCAGATAAACT 58.979 43.478 0.00 0.00 0.00 2.66
2309 2607 4.584325 ACTGAAGCAAAACATTCCTAGCAA 59.416 37.500 0.00 0.00 0.00 3.91
2310 2608 4.022935 CACTGAAGCAAAACATTCCTAGCA 60.023 41.667 0.00 0.00 0.00 3.49
2311 2609 4.216257 TCACTGAAGCAAAACATTCCTAGC 59.784 41.667 0.00 0.00 0.00 3.42
2312 2610 5.947228 TCACTGAAGCAAAACATTCCTAG 57.053 39.130 0.00 0.00 0.00 3.02
2313 2611 5.827797 AGTTCACTGAAGCAAAACATTCCTA 59.172 36.000 0.00 0.00 0.00 2.94
2314 2612 4.646492 AGTTCACTGAAGCAAAACATTCCT 59.354 37.500 0.00 0.00 0.00 3.36
2315 2613 4.936891 AGTTCACTGAAGCAAAACATTCC 58.063 39.130 0.00 0.00 0.00 3.01
2316 2614 5.460091 GGAAGTTCACTGAAGCAAAACATTC 59.540 40.000 5.01 0.00 0.00 2.67
2317 2615 5.127682 AGGAAGTTCACTGAAGCAAAACATT 59.872 36.000 5.01 0.00 0.00 2.71
2318 2616 4.646492 AGGAAGTTCACTGAAGCAAAACAT 59.354 37.500 5.01 0.00 0.00 2.71
2319 2617 4.016444 AGGAAGTTCACTGAAGCAAAACA 58.984 39.130 5.01 0.00 0.00 2.83
2320 2618 4.639135 AGGAAGTTCACTGAAGCAAAAC 57.361 40.909 5.01 0.00 0.00 2.43
2321 2619 4.677779 GCAAGGAAGTTCACTGAAGCAAAA 60.678 41.667 5.01 0.00 0.00 2.44
2322 2620 3.181487 GCAAGGAAGTTCACTGAAGCAAA 60.181 43.478 5.01 0.00 0.00 3.68
2339 2637 4.022068 ACCATCACATAAACACAAGCAAGG 60.022 41.667 0.00 0.00 0.00 3.61
2365 2663 3.737559 ATATCTCGCTCCAGGATCTCT 57.262 47.619 0.00 0.00 0.00 3.10
2384 2682 7.202526 CGCCATTGACAAAATCAGGTTAATAT 58.797 34.615 0.00 0.00 38.99 1.28
2385 2683 6.559810 CGCCATTGACAAAATCAGGTTAATA 58.440 36.000 0.00 0.00 38.99 0.98
2387 2685 4.804108 CGCCATTGACAAAATCAGGTTAA 58.196 39.130 0.00 0.00 38.99 2.01
2388 2686 3.366883 GCGCCATTGACAAAATCAGGTTA 60.367 43.478 0.00 0.00 38.99 2.85
2389 2687 2.610232 GCGCCATTGACAAAATCAGGTT 60.610 45.455 0.00 0.00 38.99 3.50
2391 2689 1.632422 GCGCCATTGACAAAATCAGG 58.368 50.000 0.00 0.00 38.99 3.86
2392 2690 1.067706 TGGCGCCATTGACAAAATCAG 60.068 47.619 29.03 0.00 38.99 2.90
2394 2692 1.928503 CATGGCGCCATTGACAAAATC 59.071 47.619 38.86 1.21 33.90 2.17
2395 2693 1.405797 CCATGGCGCCATTGACAAAAT 60.406 47.619 38.86 14.00 33.90 1.82
2396 2694 0.037512 CCATGGCGCCATTGACAAAA 60.038 50.000 38.86 9.88 33.90 2.44
2398 2696 3.004326 GCCATGGCGCCATTGACAA 62.004 57.895 37.12 13.82 33.90 3.18
2399 2697 3.451004 GCCATGGCGCCATTGACA 61.451 61.111 37.12 14.60 33.90 3.58
2400 2698 3.451004 TGCCATGGCGCCATTGAC 61.451 61.111 37.12 28.62 45.51 3.18
2401 2699 3.451004 GTGCCATGGCGCCATTGA 61.451 61.111 37.12 22.89 44.94 2.57
2418 2716 0.596083 CAGCGATCTACGAAGGCCAG 60.596 60.000 5.01 0.00 45.77 4.85
2423 2721 4.491234 AATCTACCAGCGATCTACGAAG 57.509 45.455 0.00 0.00 45.77 3.79
2426 2724 4.215827 AGGTTAATCTACCAGCGATCTACG 59.784 45.833 0.00 0.00 40.82 3.51
2427 2725 5.241064 TCAGGTTAATCTACCAGCGATCTAC 59.759 44.000 0.00 0.00 40.82 2.59
2431 2729 5.070446 TCAATCAGGTTAATCTACCAGCGAT 59.930 40.000 0.00 0.00 40.82 4.58
2433 2731 4.693283 TCAATCAGGTTAATCTACCAGCG 58.307 43.478 0.00 0.00 40.82 5.18
2466 2766 3.010138 AGCAGTACTCATAAGCCCCAAAA 59.990 43.478 0.00 0.00 0.00 2.44
2491 2791 3.504906 AGATCATTGTGCTCAAACTGGTG 59.495 43.478 5.15 0.00 37.11 4.17
2492 2792 3.759581 AGATCATTGTGCTCAAACTGGT 58.240 40.909 5.15 0.00 37.11 4.00
2494 2794 6.965500 GTCATTAGATCATTGTGCTCAAACTG 59.035 38.462 5.15 0.67 37.11 3.16
2495 2795 6.883217 AGTCATTAGATCATTGTGCTCAAACT 59.117 34.615 5.15 5.88 37.11 2.66
2496 2796 7.081526 AGTCATTAGATCATTGTGCTCAAAC 57.918 36.000 5.15 0.00 37.11 2.93
2497 2797 7.823799 TGTAGTCATTAGATCATTGTGCTCAAA 59.176 33.333 5.15 0.00 37.11 2.69
2498 2798 7.330262 TGTAGTCATTAGATCATTGTGCTCAA 58.670 34.615 3.31 3.31 37.98 3.02
2499 2799 6.877236 TGTAGTCATTAGATCATTGTGCTCA 58.123 36.000 0.00 0.00 0.00 4.26
2500 2800 6.073873 GCTGTAGTCATTAGATCATTGTGCTC 60.074 42.308 0.00 0.00 0.00 4.26
2502 2802 5.525012 TGCTGTAGTCATTAGATCATTGTGC 59.475 40.000 0.00 0.00 0.00 4.57
2503 2803 7.404985 GTTGCTGTAGTCATTAGATCATTGTG 58.595 38.462 0.00 0.00 0.00 3.33
2505 2805 6.476706 TCGTTGCTGTAGTCATTAGATCATTG 59.523 38.462 0.00 0.00 0.00 2.82
2510 2810 5.584253 ACTCGTTGCTGTAGTCATTAGAT 57.416 39.130 0.00 0.00 0.00 1.98
2511 2811 5.413523 TGTACTCGTTGCTGTAGTCATTAGA 59.586 40.000 0.00 0.00 0.00 2.10
2512 2812 5.637809 TGTACTCGTTGCTGTAGTCATTAG 58.362 41.667 0.00 0.00 0.00 1.73
2513 2813 5.632244 TGTACTCGTTGCTGTAGTCATTA 57.368 39.130 0.00 0.00 0.00 1.90
2514 2814 4.514781 TGTACTCGTTGCTGTAGTCATT 57.485 40.909 0.00 0.00 0.00 2.57
2515 2815 4.022242 AGTTGTACTCGTTGCTGTAGTCAT 60.022 41.667 0.00 0.00 0.00 3.06
2517 2817 3.898529 AGTTGTACTCGTTGCTGTAGTC 58.101 45.455 0.00 0.00 0.00 2.59
2521 2864 3.173668 TCAAGTTGTACTCGTTGCTGT 57.826 42.857 2.11 0.00 0.00 4.40
2522 2865 4.211164 TGATTCAAGTTGTACTCGTTGCTG 59.789 41.667 2.11 0.00 0.00 4.41
2528 2871 7.528307 AGTAGTACTGATTCAAGTTGTACTCG 58.472 38.462 15.70 0.00 41.64 4.18
2547 2890 7.239143 TGACCCTATCTATGCCTTCTAGTAGTA 59.761 40.741 0.00 0.00 0.00 1.82
2548 2891 6.045695 TGACCCTATCTATGCCTTCTAGTAGT 59.954 42.308 0.00 0.00 0.00 2.73
2550 2893 6.464530 TGACCCTATCTATGCCTTCTAGTA 57.535 41.667 0.00 0.00 0.00 1.82
2553 2896 4.511112 CCCTGACCCTATCTATGCCTTCTA 60.511 50.000 0.00 0.00 0.00 2.10
2554 2897 3.515562 CCTGACCCTATCTATGCCTTCT 58.484 50.000 0.00 0.00 0.00 2.85
2555 2898 2.569404 CCCTGACCCTATCTATGCCTTC 59.431 54.545 0.00 0.00 0.00 3.46
2556 2899 2.625639 CCCTGACCCTATCTATGCCTT 58.374 52.381 0.00 0.00 0.00 4.35
2557 2900 1.203364 CCCCTGACCCTATCTATGCCT 60.203 57.143 0.00 0.00 0.00 4.75
2559 2902 1.280457 CCCCCTGACCCTATCTATGC 58.720 60.000 0.00 0.00 0.00 3.14
2564 2907 3.242291 CCGCCCCCTGACCCTATC 61.242 72.222 0.00 0.00 0.00 2.08
2576 2919 3.638592 AACATGTACAGGGCCGCCC 62.639 63.158 22.09 22.09 45.90 6.13
2578 2921 2.406616 CCAACATGTACAGGGCCGC 61.407 63.158 12.79 0.00 0.00 6.53
2580 2923 0.897863 TTGCCAACATGTACAGGGCC 60.898 55.000 21.06 0.00 43.96 5.80
2581 2924 0.243636 GTTGCCAACATGTACAGGGC 59.756 55.000 12.79 18.57 44.82 5.19
2582 2925 1.812571 GAGTTGCCAACATGTACAGGG 59.187 52.381 12.79 6.86 0.00 4.45
2583 2926 1.812571 GGAGTTGCCAACATGTACAGG 59.187 52.381 10.69 5.87 36.34 4.00
2586 2929 1.904287 TGGGAGTTGCCAACATGTAC 58.096 50.000 10.69 0.00 38.95 2.90
2587 2930 2.666272 TTGGGAGTTGCCAACATGTA 57.334 45.000 10.69 0.00 38.95 2.29
2588 2931 2.014010 ATTGGGAGTTGCCAACATGT 57.986 45.000 10.69 0.00 38.95 3.21
2590 2933 3.778265 AGTTATTGGGAGTTGCCAACAT 58.222 40.909 10.69 0.00 38.95 2.71
2592 2935 3.572255 TGAAGTTATTGGGAGTTGCCAAC 59.428 43.478 7.28 0.00 38.95 3.77
2593 2936 3.826157 CTGAAGTTATTGGGAGTTGCCAA 59.174 43.478 7.58 7.58 38.95 4.52
2595 2938 2.164422 GCTGAAGTTATTGGGAGTTGCC 59.836 50.000 0.00 0.00 0.00 4.52
2596 2939 2.159517 CGCTGAAGTTATTGGGAGTTGC 60.160 50.000 0.00 0.00 0.00 4.17
2598 2941 3.074412 CACGCTGAAGTTATTGGGAGTT 58.926 45.455 0.00 0.00 0.00 3.01
2602 2945 0.451783 GGCACGCTGAAGTTATTGGG 59.548 55.000 0.00 0.00 0.00 4.12
2603 2946 1.453155 AGGCACGCTGAAGTTATTGG 58.547 50.000 0.00 0.00 0.00 3.16
2606 2949 4.923871 CGATATTAGGCACGCTGAAGTTAT 59.076 41.667 0.00 0.00 0.00 1.89
2607 2950 4.037089 TCGATATTAGGCACGCTGAAGTTA 59.963 41.667 0.00 0.00 0.00 2.24
2608 2951 3.123804 CGATATTAGGCACGCTGAAGTT 58.876 45.455 0.00 0.00 0.00 2.66
2609 2952 2.361119 TCGATATTAGGCACGCTGAAGT 59.639 45.455 0.00 0.00 0.00 3.01
2610 2953 3.013276 TCGATATTAGGCACGCTGAAG 57.987 47.619 0.00 0.00 0.00 3.02
2612 2955 3.119602 GGTATCGATATTAGGCACGCTGA 60.120 47.826 8.66 0.00 0.00 4.26
2613 2956 3.119459 AGGTATCGATATTAGGCACGCTG 60.119 47.826 8.66 0.00 0.00 5.18
2614 2957 3.090037 AGGTATCGATATTAGGCACGCT 58.910 45.455 8.66 0.00 0.00 5.07
2615 2958 3.119602 TCAGGTATCGATATTAGGCACGC 60.120 47.826 8.66 0.00 0.00 5.34
2616 2959 4.082949 TGTCAGGTATCGATATTAGGCACG 60.083 45.833 8.66 0.00 0.00 5.34
2617 2960 5.386958 TGTCAGGTATCGATATTAGGCAC 57.613 43.478 8.66 0.00 0.00 5.01
2620 2963 7.411912 CGCATTTTGTCAGGTATCGATATTAGG 60.412 40.741 8.66 0.00 0.00 2.69
2621 2964 7.411912 CCGCATTTTGTCAGGTATCGATATTAG 60.412 40.741 8.66 1.80 0.00 1.73
2622 2965 6.367695 CCGCATTTTGTCAGGTATCGATATTA 59.632 38.462 8.66 0.00 0.00 0.98
2624 2967 4.690748 CCGCATTTTGTCAGGTATCGATAT 59.309 41.667 8.66 0.00 0.00 1.63
2625 2968 4.055360 CCGCATTTTGTCAGGTATCGATA 58.945 43.478 0.00 0.00 0.00 2.92
2626 2969 2.872245 CCGCATTTTGTCAGGTATCGAT 59.128 45.455 2.16 2.16 0.00 3.59
2627 2970 2.276201 CCGCATTTTGTCAGGTATCGA 58.724 47.619 0.00 0.00 0.00 3.59
2628 2971 1.268032 GCCGCATTTTGTCAGGTATCG 60.268 52.381 0.00 0.00 0.00 2.92
2629 2972 1.742831 TGCCGCATTTTGTCAGGTATC 59.257 47.619 0.00 0.00 0.00 2.24
2630 2973 1.832883 TGCCGCATTTTGTCAGGTAT 58.167 45.000 0.00 0.00 0.00 2.73
2631 2974 1.472082 CATGCCGCATTTTGTCAGGTA 59.528 47.619 2.16 0.00 0.00 3.08
2633 2976 0.458889 CCATGCCGCATTTTGTCAGG 60.459 55.000 2.16 0.00 0.00 3.86
2635 2978 0.527113 CTCCATGCCGCATTTTGTCA 59.473 50.000 2.16 0.00 0.00 3.58
2636 2979 0.803380 GCTCCATGCCGCATTTTGTC 60.803 55.000 2.16 0.00 35.15 3.18
2637 2980 1.216178 GCTCCATGCCGCATTTTGT 59.784 52.632 2.16 0.00 35.15 2.83
2648 2991 2.436646 AAACTCCGCGGCTCCATG 60.437 61.111 23.51 8.34 0.00 3.66
2650 2993 3.936203 ACAAACTCCGCGGCTCCA 61.936 61.111 23.51 1.03 0.00 3.86
2651 2994 3.423154 CACAAACTCCGCGGCTCC 61.423 66.667 23.51 0.00 0.00 4.70
2652 2995 4.090057 GCACAAACTCCGCGGCTC 62.090 66.667 23.51 0.00 0.00 4.70
2657 3000 4.025401 CCACCGCACAAACTCCGC 62.025 66.667 0.00 0.00 0.00 5.54
2658 3001 2.590575 ACCACCGCACAAACTCCG 60.591 61.111 0.00 0.00 0.00 4.63
2659 3002 2.551912 CCACCACCGCACAAACTCC 61.552 63.158 0.00 0.00 0.00 3.85
2660 3003 0.889186 ATCCACCACCGCACAAACTC 60.889 55.000 0.00 0.00 0.00 3.01
2662 3005 0.039527 GAATCCACCACCGCACAAAC 60.040 55.000 0.00 0.00 0.00 2.93
2663 3006 1.511318 CGAATCCACCACCGCACAAA 61.511 55.000 0.00 0.00 0.00 2.83
2664 3007 1.963855 CGAATCCACCACCGCACAA 60.964 57.895 0.00 0.00 0.00 3.33
2665 3008 2.358125 CGAATCCACCACCGCACA 60.358 61.111 0.00 0.00 0.00 4.57
2666 3009 3.124921 CCGAATCCACCACCGCAC 61.125 66.667 0.00 0.00 0.00 5.34
2667 3010 4.402528 CCCGAATCCACCACCGCA 62.403 66.667 0.00 0.00 0.00 5.69
2671 3014 4.404098 ACCGCCCGAATCCACCAC 62.404 66.667 0.00 0.00 0.00 4.16
2672 3015 4.402528 CACCGCCCGAATCCACCA 62.403 66.667 0.00 0.00 0.00 4.17
2674 3017 4.778143 AGCACCGCCCGAATCCAC 62.778 66.667 0.00 0.00 0.00 4.02
2675 3018 4.776322 CAGCACCGCCCGAATCCA 62.776 66.667 0.00 0.00 0.00 3.41
2678 3021 4.722700 AAGCAGCACCGCCCGAAT 62.723 61.111 0.00 0.00 0.00 3.34
2687 3030 1.440145 GCCCTATTCGGAAGCAGCAC 61.440 60.000 0.00 0.00 33.16 4.40
2688 3031 1.153168 GCCCTATTCGGAAGCAGCA 60.153 57.895 0.00 0.00 33.16 4.41
2689 3032 2.247437 CGCCCTATTCGGAAGCAGC 61.247 63.158 0.00 0.00 33.16 5.25
2690 3033 4.033894 CGCCCTATTCGGAAGCAG 57.966 61.111 0.00 0.00 33.16 4.24
2717 3060 4.514577 ATGACCGCCTCGAAGCCG 62.515 66.667 0.00 0.00 37.07 5.52
2718 3061 1.305930 AAAATGACCGCCTCGAAGCC 61.306 55.000 0.00 0.00 0.00 4.35
2719 3062 0.521735 AAAAATGACCGCCTCGAAGC 59.478 50.000 0.00 0.00 0.00 3.86
2720 3063 1.135689 CCAAAAATGACCGCCTCGAAG 60.136 52.381 0.00 0.00 0.00 3.79
2721 3064 0.878416 CCAAAAATGACCGCCTCGAA 59.122 50.000 0.00 0.00 0.00 3.71
2722 3065 1.582610 GCCAAAAATGACCGCCTCGA 61.583 55.000 0.00 0.00 0.00 4.04
2723 3066 1.154035 GCCAAAAATGACCGCCTCG 60.154 57.895 0.00 0.00 0.00 4.63
2724 3067 1.215382 GGCCAAAAATGACCGCCTC 59.785 57.895 0.00 0.00 36.65 4.70
2725 3068 2.635443 CGGCCAAAAATGACCGCCT 61.635 57.895 2.24 0.00 39.08 5.52
2726 3069 1.944234 ATCGGCCAAAAATGACCGCC 61.944 55.000 2.24 0.00 45.23 6.13
2727 3070 0.108851 AATCGGCCAAAAATGACCGC 60.109 50.000 2.24 0.00 45.23 5.68
2728 3071 1.991965 CAAATCGGCCAAAAATGACCG 59.008 47.619 2.24 0.00 46.97 4.79
2729 3072 2.345876 CCAAATCGGCCAAAAATGACC 58.654 47.619 2.24 0.00 0.00 4.02
2730 3073 2.345876 CCCAAATCGGCCAAAAATGAC 58.654 47.619 2.24 0.00 0.00 3.06
2731 3074 1.277557 CCCCAAATCGGCCAAAAATGA 59.722 47.619 2.24 0.00 0.00 2.57
2732 3075 1.003003 ACCCCAAATCGGCCAAAAATG 59.997 47.619 2.24 0.00 0.00 2.32
2733 3076 1.277842 GACCCCAAATCGGCCAAAAAT 59.722 47.619 2.24 0.00 0.00 1.82
2734 3077 0.682292 GACCCCAAATCGGCCAAAAA 59.318 50.000 2.24 0.00 0.00 1.94
2735 3078 1.528292 CGACCCCAAATCGGCCAAAA 61.528 55.000 2.24 0.00 35.92 2.44
2736 3079 1.974343 CGACCCCAAATCGGCCAAA 60.974 57.895 2.24 0.00 35.92 3.28
2737 3080 2.360600 CGACCCCAAATCGGCCAA 60.361 61.111 2.24 0.00 35.92 4.52
2738 3081 3.642503 ACGACCCCAAATCGGCCA 61.643 61.111 2.24 0.00 43.95 5.36
2739 3082 3.131478 CACGACCCCAAATCGGCC 61.131 66.667 0.00 0.00 43.95 6.13
2740 3083 2.046700 TCACGACCCCAAATCGGC 60.047 61.111 0.00 0.00 43.95 5.54
2741 3084 1.449601 CCTCACGACCCCAAATCGG 60.450 63.158 0.00 0.00 43.95 4.18
2742 3085 2.106683 GCCTCACGACCCCAAATCG 61.107 63.158 0.00 0.00 45.17 3.34
2743 3086 3.905249 GCCTCACGACCCCAAATC 58.095 61.111 0.00 0.00 0.00 2.17
2761 3104 4.324991 AACCGTCACTTCCCCGCC 62.325 66.667 0.00 0.00 0.00 6.13
2762 3105 2.741211 GAACCGTCACTTCCCCGC 60.741 66.667 0.00 0.00 0.00 6.13
2763 3106 2.047560 GGAACCGTCACTTCCCCG 60.048 66.667 0.00 0.00 32.31 5.73
2764 3107 2.047560 CGGAACCGTCACTTCCCC 60.048 66.667 4.99 0.00 34.68 4.81
2765 3108 2.047560 CCGGAACCGTCACTTCCC 60.048 66.667 12.23 0.00 34.68 3.97
2766 3109 2.741211 GCCGGAACCGTCACTTCC 60.741 66.667 5.05 0.00 37.81 3.46
2767 3110 3.110178 CGCCGGAACCGTCACTTC 61.110 66.667 5.05 0.00 37.81 3.01
2768 3111 4.675029 CCGCCGGAACCGTCACTT 62.675 66.667 5.05 0.00 37.81 3.16
2790 3133 3.501040 TTCCTGCCGAAACCCACCC 62.501 63.158 0.00 0.00 0.00 4.61
2791 3134 1.971695 CTTCCTGCCGAAACCCACC 60.972 63.158 0.00 0.00 0.00 4.61
2792 3135 0.822121 AACTTCCTGCCGAAACCCAC 60.822 55.000 0.00 0.00 0.00 4.61
2793 3136 0.821711 CAACTTCCTGCCGAAACCCA 60.822 55.000 0.00 0.00 0.00 4.51
2794 3137 1.524008 CCAACTTCCTGCCGAAACCC 61.524 60.000 0.00 0.00 0.00 4.11
2795 3138 0.822121 ACCAACTTCCTGCCGAAACC 60.822 55.000 0.00 0.00 0.00 3.27
2796 3139 1.029681 AACCAACTTCCTGCCGAAAC 58.970 50.000 0.00 0.00 0.00 2.78
2797 3140 2.619646 GTTAACCAACTTCCTGCCGAAA 59.380 45.455 0.00 0.00 0.00 3.46
2798 3141 2.158726 AGTTAACCAACTTCCTGCCGAA 60.159 45.455 0.88 0.00 42.51 4.30
2799 3142 1.418637 AGTTAACCAACTTCCTGCCGA 59.581 47.619 0.88 0.00 42.51 5.54
2800 3143 1.535462 CAGTTAACCAACTTCCTGCCG 59.465 52.381 0.88 0.00 42.51 5.69
2801 3144 2.858745 TCAGTTAACCAACTTCCTGCC 58.141 47.619 0.88 0.00 42.51 4.85
2802 3145 3.630312 TGTTCAGTTAACCAACTTCCTGC 59.370 43.478 15.53 0.00 42.51 4.85
2803 3146 4.638421 TGTGTTCAGTTAACCAACTTCCTG 59.362 41.667 15.53 1.43 42.51 3.86
2804 3147 4.850680 TGTGTTCAGTTAACCAACTTCCT 58.149 39.130 15.53 0.00 42.51 3.36
2805 3148 5.298276 TCATGTGTTCAGTTAACCAACTTCC 59.702 40.000 15.53 7.36 42.51 3.46
2806 3149 6.371809 TCATGTGTTCAGTTAACCAACTTC 57.628 37.500 15.53 10.73 42.51 3.01
2817 3160 5.764686 TCACTAATTTGCTCATGTGTTCAGT 59.235 36.000 0.00 0.00 0.00 3.41
2819 3162 6.486320 TCTTCACTAATTTGCTCATGTGTTCA 59.514 34.615 0.00 0.00 0.00 3.18
2821 3164 6.882610 TCTTCACTAATTTGCTCATGTGTT 57.117 33.333 0.00 0.00 0.00 3.32
2823 3166 5.798934 GCTTCTTCACTAATTTGCTCATGTG 59.201 40.000 0.00 0.00 0.00 3.21
2825 3168 5.338365 GGCTTCTTCACTAATTTGCTCATG 58.662 41.667 0.00 0.00 0.00 3.07
2837 3302 2.607892 GCGCAACGGCTTCTTCACT 61.608 57.895 0.30 0.00 38.10 3.41
2838 3303 2.127232 GCGCAACGGCTTCTTCAC 60.127 61.111 0.30 0.00 38.10 3.18
2839 3304 3.711842 CGCGCAACGGCTTCTTCA 61.712 61.111 8.75 0.00 38.44 3.02
2853 3318 1.296867 CAATTCAACTAGCGGCGCG 60.297 57.895 27.59 16.07 0.00 6.86
2854 3319 0.247695 GACAATTCAACTAGCGGCGC 60.248 55.000 26.86 26.86 0.00 6.53
2856 3321 1.355971 TCGACAATTCAACTAGCGGC 58.644 50.000 0.00 0.00 0.00 6.53
2857 3322 2.930040 ACATCGACAATTCAACTAGCGG 59.070 45.455 0.00 0.00 0.00 5.52
2858 3323 4.143115 ACAACATCGACAATTCAACTAGCG 60.143 41.667 0.00 0.00 0.00 4.26
2859 3324 5.082059 CACAACATCGACAATTCAACTAGC 58.918 41.667 0.00 0.00 0.00 3.42
2860 3325 6.228273 ACACAACATCGACAATTCAACTAG 57.772 37.500 0.00 0.00 0.00 2.57
2862 3327 5.163663 ACAACACAACATCGACAATTCAACT 60.164 36.000 0.00 0.00 0.00 3.16
2863 3328 5.034152 ACAACACAACATCGACAATTCAAC 58.966 37.500 0.00 0.00 0.00 3.18
2864 3329 5.033507 CACAACACAACATCGACAATTCAA 58.966 37.500 0.00 0.00 0.00 2.69
2866 3331 4.437495 CACACAACACAACATCGACAATTC 59.563 41.667 0.00 0.00 0.00 2.17
2867 3332 4.142491 ACACACAACACAACATCGACAATT 60.142 37.500 0.00 0.00 0.00 2.32
2868 3333 3.376859 ACACACAACACAACATCGACAAT 59.623 39.130 0.00 0.00 0.00 2.71
2870 3335 2.351455 ACACACAACACAACATCGACA 58.649 42.857 0.00 0.00 0.00 4.35
2871 3336 3.398954 AACACACAACACAACATCGAC 57.601 42.857 0.00 0.00 0.00 4.20
2872 3337 4.201832 GGTTAACACACAACACAACATCGA 60.202 41.667 8.10 0.00 0.00 3.59
2876 3341 2.414293 GCGGTTAACACACAACACAACA 60.414 45.455 8.10 0.00 0.00 3.33
2878 3343 1.810755 TGCGGTTAACACACAACACAA 59.189 42.857 8.10 0.00 0.00 3.33


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.