Multiple sequence alignment - TraesCS1B01G447100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G447100 chr1B 100.000 7449 0 0 1 7449 667018876 667011428 0.000000e+00 13756.0
1 TraesCS1B01G447100 chr1B 75.805 901 138 51 3437 4315 666864588 666863746 4.220000e-102 383.0
2 TraesCS1B01G447100 chr1B 86.286 175 14 8 7277 7444 303677710 303677881 1.650000e-41 182.0
3 TraesCS1B01G447100 chr1D 93.589 3806 163 31 3097 6871 478930861 478927106 0.000000e+00 5602.0
4 TraesCS1B01G447100 chr1D 91.289 1699 82 24 2 1680 478934060 478932408 0.000000e+00 2257.0
5 TraesCS1B01G447100 chr1D 95.587 1337 53 4 1679 3013 478932191 478930859 0.000000e+00 2137.0
6 TraesCS1B01G447100 chr1D 88.017 242 21 5 6833 7071 478927116 478926880 5.690000e-71 279.0
7 TraesCS1B01G447100 chr1D 84.956 226 31 3 4831 5054 478910779 478910555 7.520000e-55 226.0
8 TraesCS1B01G447100 chr1D 80.505 277 31 11 5582 5835 478910349 478910073 2.740000e-44 191.0
9 TraesCS1B01G447100 chr1D 91.176 102 2 5 3020 3116 210082726 210082627 1.690000e-26 132.0
10 TraesCS1B01G447100 chr1A 94.048 2033 102 10 3097 5122 575154725 575152705 0.000000e+00 3066.0
11 TraesCS1B01G447100 chr1A 91.539 1702 83 20 2 1680 575176561 575174898 0.000000e+00 2289.0
12 TraesCS1B01G447100 chr1A 95.535 1187 48 3 1828 3013 575155905 575154723 0.000000e+00 1893.0
13 TraesCS1B01G447100 chr1A 91.321 1014 51 18 5883 6871 575151860 575150859 0.000000e+00 1351.0
14 TraesCS1B01G447100 chr1A 94.799 673 30 4 5124 5794 575152532 575151863 0.000000e+00 1044.0
15 TraesCS1B01G447100 chr1A 76.301 903 135 53 3437 4314 575122616 575121768 6.960000e-110 409.0
16 TraesCS1B01G447100 chr1A 95.484 155 6 1 1679 1832 575174694 575174540 5.770000e-61 246.0
17 TraesCS1B01G447100 chr1A 93.038 158 4 4 6917 7071 575150472 575150319 2.700000e-54 224.0
18 TraesCS1B01G447100 chr1A 83.628 226 35 2 4831 5054 575121167 575120942 2.110000e-50 211.0
19 TraesCS1B01G447100 chr1A 81.227 277 29 11 5582 5835 575120738 575120462 1.270000e-47 202.0
20 TraesCS1B01G447100 chr1A 94.444 90 1 2 3020 3105 377500312 377500401 1.300000e-27 135.0
21 TraesCS1B01G447100 chr3D 92.614 176 7 5 7276 7449 355617608 355617437 1.600000e-61 248.0
22 TraesCS1B01G447100 chr3D 91.071 168 11 3 7070 7233 506166565 506166732 2.700000e-54 224.0
23 TraesCS1B01G447100 chr6D 92.638 163 11 1 7071 7232 439684863 439684701 4.490000e-57 233.0
24 TraesCS1B01G447100 chr4D 92.121 165 10 2 7071 7232 441903132 441902968 5.810000e-56 230.0
25 TraesCS1B01G447100 chr4D 85.556 180 18 6 7274 7447 386747437 386747614 1.650000e-41 182.0
26 TraesCS1B01G447100 chr7A 89.560 182 16 2 7064 7242 320981166 320981347 2.090000e-55 228.0
27 TraesCS1B01G447100 chr3A 90.857 175 9 5 7276 7449 474389135 474388967 2.090000e-55 228.0
28 TraesCS1B01G447100 chr3A 83.030 165 16 7 6627 6780 158355558 158355395 1.010000e-28 139.0
29 TraesCS1B01G447100 chr7D 91.124 169 11 3 7071 7235 245316186 245316018 7.520000e-55 226.0
30 TraesCS1B01G447100 chr7D 86.740 181 17 5 7274 7447 545233649 545233469 2.120000e-45 195.0
31 TraesCS1B01G447100 chr7D 88.393 112 7 4 3001 3108 208002513 208002622 6.070000e-26 130.0
32 TraesCS1B01G447100 chr5A 90.698 172 12 3 7071 7238 451879319 451879490 7.520000e-55 226.0
33 TraesCS1B01G447100 chr2A 91.566 166 10 3 7070 7232 4650907 4650743 7.520000e-55 226.0
34 TraesCS1B01G447100 chr2A 81.437 167 17 5 6628 6781 763517479 763517314 2.820000e-24 124.0
35 TraesCS1B01G447100 chr2A 86.486 111 14 1 6628 6737 393125134 393125024 3.650000e-23 121.0
36 TraesCS1B01G447100 chr2A 85.246 122 9 7 3020 3133 744645987 744646107 4.720000e-22 117.0
37 TraesCS1B01G447100 chr2A 79.310 145 19 8 6638 6780 471517785 471517650 2.860000e-14 91.6
38 TraesCS1B01G447100 chr2B 90.588 170 13 2 7070 7236 157270635 157270804 9.730000e-54 222.0
39 TraesCS1B01G447100 chr2B 87.151 179 14 7 7274 7447 749824826 749825000 2.120000e-45 195.0
40 TraesCS1B01G447100 chr2B 86.517 178 18 6 7275 7447 749820926 749821102 2.740000e-44 191.0
41 TraesCS1B01G447100 chr2B 91.111 90 4 2 3020 3105 439444282 439444371 1.310000e-22 119.0
42 TraesCS1B01G447100 chr2B 78.142 183 34 6 1 182 6375073 6374896 2.200000e-20 111.0
43 TraesCS1B01G447100 chr4A 90.909 165 12 2 7071 7232 18115391 18115555 1.260000e-52 219.0
44 TraesCS1B01G447100 chr4A 85.030 167 12 3 6627 6780 24156679 24156845 2.780000e-34 158.0
45 TraesCS1B01G447100 chr4A 83.735 166 13 6 6627 6779 429985977 429985813 2.170000e-30 145.0
46 TraesCS1B01G447100 chr4A 84.404 109 13 3 5432 5536 441757700 441757592 3.680000e-18 104.0
47 TraesCS1B01G447100 chr2D 90.173 173 10 6 7274 7441 29015708 29015538 1.260000e-52 219.0
48 TraesCS1B01G447100 chr2D 88.889 108 10 2 6628 6734 569133331 569133225 1.690000e-26 132.0
49 TraesCS1B01G447100 chr7B 86.592 179 12 9 7277 7447 223351892 223351718 3.550000e-43 187.0
50 TraesCS1B01G447100 chr7B 94.444 90 1 2 3020 3105 256184882 256184793 1.300000e-27 135.0
51 TraesCS1B01G447100 chr3B 90.090 111 10 1 6628 6737 820798367 820798477 7.790000e-30 143.0
52 TraesCS1B01G447100 chr5B 92.157 102 1 5 3020 3116 199877568 199877667 3.620000e-28 137.0
53 TraesCS1B01G447100 chr5B 86.555 119 8 5 3020 3131 93472183 93472066 2.820000e-24 124.0
54 TraesCS1B01G447100 chr5D 93.407 91 2 2 3020 3106 6096373 6096463 1.690000e-26 132.0
55 TraesCS1B01G447100 chr4B 88.462 104 11 1 6635 6737 642190416 642190519 2.820000e-24 124.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G447100 chr1B 667011428 667018876 7448 True 13756.00 13756 100.000000 1 7449 1 chr1B.!!$R2 7448
1 TraesCS1B01G447100 chr1B 666863746 666864588 842 True 383.00 383 75.805000 3437 4315 1 chr1B.!!$R1 878
2 TraesCS1B01G447100 chr1D 478926880 478934060 7180 True 2568.75 5602 92.120500 2 7071 4 chr1D.!!$R3 7069
3 TraesCS1B01G447100 chr1D 478910073 478910779 706 True 208.50 226 82.730500 4831 5835 2 chr1D.!!$R2 1004
4 TraesCS1B01G447100 chr1A 575150319 575155905 5586 True 1515.60 3066 93.748200 1828 7071 5 chr1A.!!$R2 5243
5 TraesCS1B01G447100 chr1A 575174540 575176561 2021 True 1267.50 2289 93.511500 2 1832 2 chr1A.!!$R3 1830
6 TraesCS1B01G447100 chr1A 575120462 575122616 2154 True 274.00 409 80.385333 3437 5835 3 chr1A.!!$R1 2398

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
555 567 0.800631 GGGGTTTACCGCTCGAAAAG 59.199 55.0 8.58 0.00 44.66 2.27 F
1677 1719 0.727398 GACCGCAACTGTATCCAAGC 59.273 55.0 0.00 0.00 0.00 4.01 F
1678 1720 1.019278 ACCGCAACTGTATCCAAGCG 61.019 55.0 0.00 0.00 44.24 4.68 F
2118 2386 1.701704 CGACAATTCCTTTGCAAGCC 58.298 50.0 0.00 0.00 39.03 4.35 F
3683 3955 1.092348 GGTTCGTTATGCCTGTTCCC 58.908 55.0 0.00 0.00 0.00 3.97 F
4208 4501 0.813821 GGGAAAGAGCATGCTGTTCC 59.186 55.0 33.22 33.22 36.69 3.62 F
5861 6521 0.106419 TCCCACAAAACGCCTCCTTT 60.106 50.0 0.00 0.00 0.00 3.11 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1916 2184 1.063912 TGACACAAGAAAGTGCGCAAG 59.936 47.619 14.0 0.0 43.23 4.01 R
3609 3881 0.252974 TGAGGGGCTTAGTGGGCTAA 60.253 55.000 0.0 0.0 35.98 3.09 R
3646 3918 4.694339 GAACCTGTGTACTTCTGACAAGT 58.306 43.478 0.0 0.0 0.00 3.16 R
3877 4162 4.301072 AGGCAGCCTTAATTAACTGTGA 57.699 40.909 8.7 0.0 32.65 3.58 R
4658 5018 0.798776 GTTGCTTGTGACATCCTCGG 59.201 55.000 0.0 0.0 0.00 4.63 R
6021 6684 0.329261 ATGCTGCTCTGGGTGCTAAA 59.671 50.000 0.0 0.0 0.00 1.85 R
7235 8267 0.040425 ACCGTTCGCTGTCATTTTGC 60.040 50.000 0.0 0.0 0.00 3.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
131 132 4.394712 GTCACCACCTCCAGGCCG 62.395 72.222 0.00 0.00 39.32 6.13
139 140 1.228124 CCTCCAGGCCGTGTCAAAA 60.228 57.895 0.00 0.00 0.00 2.44
185 186 3.682885 CACATGCCCGCAGCCAAA 61.683 61.111 0.00 0.00 42.71 3.28
217 218 0.884259 CGAGCCACAACACCATCACA 60.884 55.000 0.00 0.00 0.00 3.58
340 350 3.148279 CGGGCGGCTTCCTCTAGT 61.148 66.667 9.56 0.00 0.00 2.57
346 356 2.359967 GGCTTCCTCTAGTGGCGGT 61.360 63.158 5.93 0.00 0.00 5.68
490 501 1.240641 CGTTTGTGGCTGGGCATACA 61.241 55.000 0.00 0.00 0.00 2.29
491 502 1.185315 GTTTGTGGCTGGGCATACAT 58.815 50.000 0.00 0.00 30.12 2.29
519 531 4.944930 CCCGTTTATCATTCCTGTAAACCA 59.055 41.667 0.00 0.00 35.79 3.67
537 549 8.852135 TGTAAACCAAACTCCTTAATAAACTGG 58.148 33.333 0.00 0.00 0.00 4.00
549 561 2.995283 ATAAACTGGGGTTTACCGCTC 58.005 47.619 15.80 0.00 46.46 5.03
550 562 2.678769 ATAAACTGGGGTTTACCGCTCG 60.679 50.000 15.80 9.91 46.46 5.03
555 567 0.800631 GGGGTTTACCGCTCGAAAAG 59.199 55.000 8.58 0.00 44.66 2.27
558 570 2.549329 GGGTTTACCGCTCGAAAAGAAA 59.451 45.455 0.00 0.00 36.71 2.52
585 597 3.836562 TGTAGAGAGTAGGGTGGGTTTTC 59.163 47.826 0.00 0.00 0.00 2.29
607 619 1.118838 CTCTGTTTTTGGGGTGGCAA 58.881 50.000 0.00 0.00 0.00 4.52
673 685 5.649557 AGACATTCAGAGATTTCAGACTCG 58.350 41.667 0.00 0.00 38.08 4.18
874 890 1.340991 GGCAGGAGACATAAAAGCCCA 60.341 52.381 0.00 0.00 34.71 5.36
1279 1301 2.704596 CTCCATCCATGAGTGACAGGAT 59.295 50.000 0.00 0.00 37.16 3.24
1292 1319 5.003804 AGTGACAGGATTCATTACCAACAC 58.996 41.667 0.00 0.00 0.00 3.32
1317 1344 7.547227 CCAATCGGGTTTAGAATTTCAGATTT 58.453 34.615 0.00 0.00 0.00 2.17
1335 1362 8.906636 TCAGATTTATGTTTGACTAGTCGTAC 57.093 34.615 17.85 16.94 0.00 3.67
1342 1369 4.766373 TGTTTGACTAGTCGTACCCATGTA 59.234 41.667 17.85 0.00 0.00 2.29
1343 1370 5.419788 TGTTTGACTAGTCGTACCCATGTAT 59.580 40.000 17.85 0.00 0.00 2.29
1344 1371 5.762825 TTGACTAGTCGTACCCATGTATC 57.237 43.478 17.85 0.00 0.00 2.24
1345 1372 5.045012 TGACTAGTCGTACCCATGTATCT 57.955 43.478 17.85 0.00 0.00 1.98
1346 1373 6.178607 TGACTAGTCGTACCCATGTATCTA 57.821 41.667 17.85 0.00 0.00 1.98
1347 1374 6.776744 TGACTAGTCGTACCCATGTATCTAT 58.223 40.000 17.85 0.00 0.00 1.98
1348 1375 6.653740 TGACTAGTCGTACCCATGTATCTATG 59.346 42.308 17.85 0.00 0.00 2.23
1349 1376 4.785511 AGTCGTACCCATGTATCTATGC 57.214 45.455 0.00 0.00 0.00 3.14
1350 1377 4.408276 AGTCGTACCCATGTATCTATGCT 58.592 43.478 0.00 0.00 0.00 3.79
1351 1378 4.459685 AGTCGTACCCATGTATCTATGCTC 59.540 45.833 0.00 0.00 0.00 4.26
1352 1379 3.762288 TCGTACCCATGTATCTATGCTCC 59.238 47.826 0.00 0.00 0.00 4.70
1361 1399 5.952526 TGTATCTATGCTCCGTCGATTTA 57.047 39.130 0.00 0.00 0.00 1.40
1492 1534 5.046529 CCTATGTTCTCTATGTGTGTGCTC 58.953 45.833 0.00 0.00 0.00 4.26
1583 1625 3.499737 CTGCGCGGCCTTTTCGAT 61.500 61.111 8.83 0.00 0.00 3.59
1675 1717 2.552599 TTGACCGCAACTGTATCCAA 57.447 45.000 0.00 0.00 0.00 3.53
1676 1718 2.093306 TGACCGCAACTGTATCCAAG 57.907 50.000 0.00 0.00 0.00 3.61
1677 1719 0.727398 GACCGCAACTGTATCCAAGC 59.273 55.000 0.00 0.00 0.00 4.01
1678 1720 1.019278 ACCGCAACTGTATCCAAGCG 61.019 55.000 0.00 0.00 44.24 4.68
1916 2184 6.838382 AGTGATTTGTATAATCCAGGTACCC 58.162 40.000 8.74 0.00 0.00 3.69
1962 2230 3.123959 GCGAAACCGTAAGTGCTTCATTA 59.876 43.478 0.00 0.00 0.00 1.90
1984 2252 4.533919 TTCGATGGCCAAAATTGTCAAT 57.466 36.364 10.96 0.00 0.00 2.57
2065 2333 3.550820 TCCAGCACTTTGAAGTTAAGCA 58.449 40.909 7.23 0.00 37.08 3.91
2073 2341 7.383300 AGCACTTTGAAGTTAAGCATTCATTTC 59.617 33.333 7.23 0.00 37.08 2.17
2080 2348 7.888021 TGAAGTTAAGCATTCATTTCCCTAAGA 59.112 33.333 0.00 0.00 30.67 2.10
2081 2349 8.650143 AAGTTAAGCATTCATTTCCCTAAGAA 57.350 30.769 0.00 0.00 0.00 2.52
2118 2386 1.701704 CGACAATTCCTTTGCAAGCC 58.298 50.000 0.00 0.00 39.03 4.35
2588 2856 4.724279 TGGAAGAATAGGGGGATTAAGC 57.276 45.455 0.00 0.00 0.00 3.09
2663 2932 6.564557 ACCTTCCTATTACCGGAACATTTA 57.435 37.500 9.46 0.00 35.70 1.40
2738 3007 8.846943 TTCTTTTTATCTGCACATTCTAGACA 57.153 30.769 0.00 0.00 0.00 3.41
2783 3052 7.611855 TGTTCTATCATCTTGAGAGACTGTGTA 59.388 37.037 1.54 0.00 43.52 2.90
2870 3139 9.647797 TGTAACACTATAGACACTTGTATTTGG 57.352 33.333 6.78 0.00 0.00 3.28
2903 3172 3.828451 ACTCATGTTTGATCCCAACCTTG 59.172 43.478 0.00 2.17 30.88 3.61
2915 3184 8.742125 TGATCCCAACCTTGATCTATATAAGT 57.258 34.615 0.00 0.00 38.53 2.24
2919 3188 9.090103 TCCCAACCTTGATCTATATAAGTAGTG 57.910 37.037 0.00 0.00 0.00 2.74
2966 3235 5.977635 ACATCACATCATCGAGTTTTCCTA 58.022 37.500 0.00 0.00 0.00 2.94
3010 3279 6.664428 AACCCACAGTTGCTATAAAAACAT 57.336 33.333 0.00 0.00 37.29 2.71
3011 3280 7.768807 AACCCACAGTTGCTATAAAAACATA 57.231 32.000 0.00 0.00 37.29 2.29
3012 3281 7.153217 ACCCACAGTTGCTATAAAAACATAC 57.847 36.000 0.00 0.00 0.00 2.39
3013 3282 6.946009 ACCCACAGTTGCTATAAAAACATACT 59.054 34.615 0.00 0.00 0.00 2.12
3014 3283 7.120726 ACCCACAGTTGCTATAAAAACATACTC 59.879 37.037 0.00 0.00 0.00 2.59
3015 3284 7.415206 CCCACAGTTGCTATAAAAACATACTCC 60.415 40.741 0.00 0.00 0.00 3.85
3016 3285 7.415206 CCACAGTTGCTATAAAAACATACTCCC 60.415 40.741 0.00 0.00 0.00 4.30
3017 3286 7.336931 CACAGTTGCTATAAAAACATACTCCCT 59.663 37.037 0.00 0.00 0.00 4.20
3018 3287 7.553044 ACAGTTGCTATAAAAACATACTCCCTC 59.447 37.037 0.00 0.00 0.00 4.30
3019 3288 7.552687 CAGTTGCTATAAAAACATACTCCCTCA 59.447 37.037 0.00 0.00 0.00 3.86
3020 3289 7.770897 AGTTGCTATAAAAACATACTCCCTCAG 59.229 37.037 0.00 0.00 0.00 3.35
3021 3290 7.195374 TGCTATAAAAACATACTCCCTCAGT 57.805 36.000 0.00 0.00 39.41 3.41
3022 3291 7.047891 TGCTATAAAAACATACTCCCTCAGTG 58.952 38.462 0.00 0.00 36.43 3.66
3023 3292 7.048512 GCTATAAAAACATACTCCCTCAGTGT 58.951 38.462 0.00 0.00 36.43 3.55
3024 3293 8.202137 GCTATAAAAACATACTCCCTCAGTGTA 58.798 37.037 0.00 0.00 36.43 2.90
3025 3294 9.751542 CTATAAAAACATACTCCCTCAGTGTAG 57.248 37.037 0.00 0.00 36.43 2.74
3026 3295 6.681729 AAAAACATACTCCCTCAGTGTAGA 57.318 37.500 0.00 0.00 36.43 2.59
3027 3296 6.875972 AAAACATACTCCCTCAGTGTAGAT 57.124 37.500 0.00 0.00 36.43 1.98
3028 3297 6.875972 AAACATACTCCCTCAGTGTAGATT 57.124 37.500 0.00 0.00 36.43 2.40
3029 3298 6.472686 AACATACTCCCTCAGTGTAGATTC 57.527 41.667 0.00 0.00 36.43 2.52
3030 3299 5.519808 ACATACTCCCTCAGTGTAGATTCA 58.480 41.667 0.00 0.00 36.43 2.57
3031 3300 5.361285 ACATACTCCCTCAGTGTAGATTCAC 59.639 44.000 0.00 0.00 36.43 3.18
3033 3302 4.020543 ACTCCCTCAGTGTAGATTCACTC 58.979 47.826 0.00 0.00 45.37 3.51
3034 3303 4.019858 CTCCCTCAGTGTAGATTCACTCA 58.980 47.826 0.00 0.00 45.37 3.41
3035 3304 4.614475 TCCCTCAGTGTAGATTCACTCAT 58.386 43.478 0.00 0.00 45.37 2.90
3036 3305 5.026121 TCCCTCAGTGTAGATTCACTCATT 58.974 41.667 0.00 0.00 45.37 2.57
3037 3306 5.485353 TCCCTCAGTGTAGATTCACTCATTT 59.515 40.000 0.00 0.00 45.37 2.32
3038 3307 6.013379 TCCCTCAGTGTAGATTCACTCATTTT 60.013 38.462 0.00 0.00 45.37 1.82
3039 3308 6.093219 CCCTCAGTGTAGATTCACTCATTTTG 59.907 42.308 0.00 0.00 45.37 2.44
3040 3309 6.652481 CCTCAGTGTAGATTCACTCATTTTGT 59.348 38.462 0.00 0.00 45.37 2.83
3041 3310 7.173907 CCTCAGTGTAGATTCACTCATTTTGTT 59.826 37.037 0.00 0.00 45.37 2.83
3042 3311 9.208022 CTCAGTGTAGATTCACTCATTTTGTTA 57.792 33.333 0.00 0.00 45.37 2.41
3043 3312 9.725019 TCAGTGTAGATTCACTCATTTTGTTAT 57.275 29.630 0.00 0.00 45.37 1.89
3044 3313 9.764870 CAGTGTAGATTCACTCATTTTGTTATG 57.235 33.333 0.00 0.00 45.37 1.90
3045 3314 9.507329 AGTGTAGATTCACTCATTTTGTTATGT 57.493 29.630 0.00 0.00 44.07 2.29
3050 3319 9.725019 AGATTCACTCATTTTGTTATGTAGTCA 57.275 29.630 0.00 0.00 0.00 3.41
3051 3320 9.760660 GATTCACTCATTTTGTTATGTAGTCAC 57.239 33.333 0.00 0.00 0.00 3.67
3052 3321 8.902540 TTCACTCATTTTGTTATGTAGTCACT 57.097 30.769 0.00 0.00 0.00 3.41
3053 3322 8.902540 TCACTCATTTTGTTATGTAGTCACTT 57.097 30.769 0.00 0.00 0.00 3.16
3054 3323 8.773645 TCACTCATTTTGTTATGTAGTCACTTG 58.226 33.333 0.00 0.00 0.00 3.16
3055 3324 8.559536 CACTCATTTTGTTATGTAGTCACTTGT 58.440 33.333 0.00 0.00 0.00 3.16
3056 3325 9.120538 ACTCATTTTGTTATGTAGTCACTTGTT 57.879 29.630 0.00 0.00 0.00 2.83
3057 3326 9.385902 CTCATTTTGTTATGTAGTCACTTGTTG 57.614 33.333 0.00 0.00 0.00 3.33
3058 3327 8.349245 TCATTTTGTTATGTAGTCACTTGTTGG 58.651 33.333 0.00 0.00 0.00 3.77
3059 3328 7.867305 TTTTGTTATGTAGTCACTTGTTGGA 57.133 32.000 0.00 0.00 0.00 3.53
3060 3329 7.867305 TTTGTTATGTAGTCACTTGTTGGAA 57.133 32.000 0.00 0.00 0.00 3.53
3061 3330 8.458573 TTTGTTATGTAGTCACTTGTTGGAAT 57.541 30.769 0.00 0.00 0.00 3.01
3062 3331 7.667043 TGTTATGTAGTCACTTGTTGGAATC 57.333 36.000 0.00 0.00 0.00 2.52
3063 3332 7.450074 TGTTATGTAGTCACTTGTTGGAATCT 58.550 34.615 0.00 0.00 0.00 2.40
3064 3333 7.602644 TGTTATGTAGTCACTTGTTGGAATCTC 59.397 37.037 0.00 0.00 0.00 2.75
3065 3334 5.808366 TGTAGTCACTTGTTGGAATCTCT 57.192 39.130 0.00 0.00 0.00 3.10
3066 3335 6.911250 TGTAGTCACTTGTTGGAATCTCTA 57.089 37.500 0.00 0.00 0.00 2.43
3067 3336 6.925211 TGTAGTCACTTGTTGGAATCTCTAG 58.075 40.000 0.00 0.00 0.00 2.43
3068 3337 6.719829 TGTAGTCACTTGTTGGAATCTCTAGA 59.280 38.462 0.00 0.00 0.00 2.43
3069 3338 6.672266 AGTCACTTGTTGGAATCTCTAGAA 57.328 37.500 0.00 0.00 0.00 2.10
3070 3339 7.067496 AGTCACTTGTTGGAATCTCTAGAAA 57.933 36.000 0.00 0.00 0.00 2.52
3071 3340 7.158021 AGTCACTTGTTGGAATCTCTAGAAAG 58.842 38.462 0.00 0.00 0.00 2.62
3072 3341 7.015682 AGTCACTTGTTGGAATCTCTAGAAAGA 59.984 37.037 0.00 0.00 0.00 2.52
3073 3342 7.117092 GTCACTTGTTGGAATCTCTAGAAAGAC 59.883 40.741 0.00 0.00 0.00 3.01
3074 3343 6.931281 CACTTGTTGGAATCTCTAGAAAGACA 59.069 38.462 0.00 0.00 0.00 3.41
3075 3344 7.442364 CACTTGTTGGAATCTCTAGAAAGACAA 59.558 37.037 0.00 0.00 0.00 3.18
3076 3345 7.993183 ACTTGTTGGAATCTCTAGAAAGACAAA 59.007 33.333 0.00 0.00 0.00 2.83
3077 3346 8.924511 TTGTTGGAATCTCTAGAAAGACAAAT 57.075 30.769 0.00 0.00 0.00 2.32
3089 3358 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
3090 3359 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
3091 3360 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
3092 3361 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
3093 3362 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
3094 3363 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
3095 3364 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
3189 3458 8.675504 AGCGCGTAGTCTATCTAATTAATACAT 58.324 33.333 8.43 0.00 0.00 2.29
3344 3613 8.362639 GTGAATCCAGATATTTATTTGGCATGT 58.637 33.333 0.00 0.00 37.74 3.21
3609 3881 3.181329 TCAGTTATGGTGTGGGATCAGT 58.819 45.455 0.00 0.00 0.00 3.41
3646 3918 6.884836 GCCCCTCACTAAATTTTTCTCTAGAA 59.115 38.462 0.00 0.00 0.00 2.10
3683 3955 1.092348 GGTTCGTTATGCCTGTTCCC 58.908 55.000 0.00 0.00 0.00 3.97
3736 4009 8.542953 CCTTTTGTTACTTTGCAAAGATCTTTC 58.457 33.333 38.78 22.83 39.31 2.62
3819 4099 2.869233 TGCCAGAAACTTTTGCTGTC 57.131 45.000 0.00 0.00 0.00 3.51
3842 4123 7.936847 TGTCTGAGCTCCTTTGTAAAATTCTTA 59.063 33.333 12.15 0.00 0.00 2.10
3928 4213 7.479980 TGTATGGTTCTTTCTTGTCACTTTTG 58.520 34.615 0.00 0.00 0.00 2.44
4176 4469 9.720667 ACACGGTTAAGTTTTGTACTTTTATTC 57.279 29.630 0.00 0.00 44.73 1.75
4208 4501 0.813821 GGGAAAGAGCATGCTGTTCC 59.186 55.000 33.22 33.22 36.69 3.62
4393 4739 4.090819 TGTACTGTTGGTATGTGCCTAGA 58.909 43.478 0.00 0.00 32.56 2.43
4469 4820 7.757097 AAGTGCATAGTAATCTTGTAGTTCG 57.243 36.000 0.00 0.00 0.00 3.95
4612 4972 1.200716 CACCTGCTACTTGCCATGTTG 59.799 52.381 0.00 0.00 42.00 3.33
4621 4981 3.295973 ACTTGCCATGTTGGTAAAGTGT 58.704 40.909 12.85 0.83 41.53 3.55
4810 5209 3.784202 TCCATTAGGTAAAAGGAGGTCCC 59.216 47.826 0.00 0.00 34.39 4.46
4957 5363 6.543735 ACTTAATATGATCTTTAGGGTGGGC 58.456 40.000 0.00 0.00 0.00 5.36
4982 5388 0.950836 CAAACCAACAGACGATGCCA 59.049 50.000 0.00 0.00 0.00 4.92
5011 5417 3.624861 CCTCGTTTCAGATAGCTGCAAAT 59.375 43.478 2.24 0.00 42.01 2.32
5054 5460 8.529476 ACTTCCTAGTAAAGGTATGTTACACAG 58.471 37.037 6.96 0.00 46.62 3.66
5077 5484 2.969821 TATTCAAACAGTGCCCAGGT 57.030 45.000 0.00 0.00 0.00 4.00
5292 5909 3.679389 ACTTCCATGTCTGAACCACATC 58.321 45.455 0.00 0.00 31.83 3.06
5428 6045 3.346315 TGTACAAGCCATCATGGTCAAG 58.654 45.455 5.31 0.00 40.46 3.02
5459 6076 6.183361 ACTCCCTTCCTCCCATATTAATTGAC 60.183 42.308 0.00 0.00 0.00 3.18
5469 6086 6.545666 TCCCATATTAATTGACGCTGAAACAT 59.454 34.615 0.00 0.00 0.00 2.71
5495 6112 6.447162 TGTATCACTGAAATACGCCTAGATG 58.553 40.000 0.00 0.00 33.22 2.90
5509 6126 3.119388 GCCTAGATGCATTTGTTTCAGCA 60.119 43.478 0.00 0.00 41.73 4.41
5528 6145 5.003160 CAGCATCAATTAATATGGGACGGA 58.997 41.667 1.39 0.00 0.00 4.69
5774 6433 9.911788 AATAAAACACTCCATACTTCTGATCAT 57.088 29.630 0.00 0.00 0.00 2.45
5836 6496 7.964604 ACACTCCTTTGATCTTACTTTACAC 57.035 36.000 0.00 0.00 0.00 2.90
5861 6521 0.106419 TCCCACAAAACGCCTCCTTT 60.106 50.000 0.00 0.00 0.00 3.11
5915 6575 9.520515 AAGGTCTAAAAAGAAATGAATGCTCTA 57.479 29.630 0.00 0.00 0.00 2.43
5943 6604 8.164058 ACCCATGAAAATGGTTTGTAATTTTG 57.836 30.769 0.00 0.00 40.06 2.44
5945 6606 8.074972 CCCATGAAAATGGTTTGTAATTTTGTG 58.925 33.333 0.00 0.00 40.06 3.33
5946 6609 8.619546 CCATGAAAATGGTTTGTAATTTTGTGT 58.380 29.630 0.00 0.00 36.40 3.72
5989 6652 5.183713 TGTTTTCTCTGGGTATGATGCTTTG 59.816 40.000 0.00 0.00 0.00 2.77
6002 6665 5.772825 TGATGCTTTGTTTAAGACTGCTT 57.227 34.783 0.00 0.00 35.80 3.91
6003 6666 5.762045 TGATGCTTTGTTTAAGACTGCTTC 58.238 37.500 0.00 0.00 35.80 3.86
6004 6667 4.568152 TGCTTTGTTTAAGACTGCTTCC 57.432 40.909 0.00 0.00 35.80 3.46
6005 6668 4.207165 TGCTTTGTTTAAGACTGCTTCCT 58.793 39.130 0.00 0.00 35.80 3.36
6006 6669 5.373222 TGCTTTGTTTAAGACTGCTTCCTA 58.627 37.500 0.00 0.00 35.80 2.94
6007 6670 5.470098 TGCTTTGTTTAAGACTGCTTCCTAG 59.530 40.000 0.00 0.00 35.80 3.02
6008 6671 5.106515 GCTTTGTTTAAGACTGCTTCCTAGG 60.107 44.000 0.82 0.82 35.80 3.02
6021 6684 5.216622 TGCTTCCTAGGTCCTACATAACAT 58.783 41.667 9.08 0.00 0.00 2.71
6029 6692 5.681639 AGGTCCTACATAACATTTAGCACC 58.318 41.667 0.00 0.00 0.00 5.01
6041 6704 0.329261 TTAGCACCCAGAGCAGCATT 59.671 50.000 0.00 0.00 0.00 3.56
6132 6799 6.949352 AGTGTATTTATGGGATGCTTTCTG 57.051 37.500 0.00 0.00 0.00 3.02
6136 6803 3.737559 TTATGGGATGCTTTCTGGTGT 57.262 42.857 0.00 0.00 0.00 4.16
6350 7022 2.865551 CTGCCACAACAATGTTCCAAAC 59.134 45.455 0.00 0.00 37.82 2.93
6528 7200 4.478203 CTCCTGAGAGGAATGTCTGGATA 58.522 47.826 2.26 0.00 45.28 2.59
6556 7228 8.354426 TCATTAGTATTGCACGTACTAATAGCA 58.646 33.333 27.13 18.11 46.11 3.49
6563 7235 5.516996 TGCACGTACTAATAGCACTATGTC 58.483 41.667 0.00 0.00 0.00 3.06
6586 7258 5.695816 TCTTGCAAATCTTAATTGGTTGCAC 59.304 36.000 8.75 0.00 36.41 4.57
6587 7259 5.212532 TGCAAATCTTAATTGGTTGCACT 57.787 34.783 5.33 0.00 33.39 4.40
6595 7267 7.987750 TCTTAATTGGTTGCACTTACATACA 57.012 32.000 0.00 0.00 0.00 2.29
6651 7323 2.427753 GATGGAGGGGCGATGACC 59.572 66.667 0.00 0.00 0.00 4.02
6691 7364 2.882927 TCAGTGCTTGTAGTTGTCGT 57.117 45.000 0.00 0.00 0.00 4.34
6704 7377 6.179756 TGTAGTTGTCGTTAGGTGGTCTATA 58.820 40.000 0.00 0.00 0.00 1.31
6895 7614 0.107848 GCGCCAGCTTTTAGGTAGGA 60.108 55.000 0.00 0.00 41.01 2.94
7068 8100 3.400007 GGCGTGCTTCCGAAGATC 58.600 61.111 12.54 3.08 0.00 2.75
7070 8102 1.153549 GCGTGCTTCCGAAGATCCT 60.154 57.895 12.54 0.00 0.00 3.24
7071 8103 0.102481 GCGTGCTTCCGAAGATCCTA 59.898 55.000 12.54 0.00 0.00 2.94
7072 8104 1.841450 CGTGCTTCCGAAGATCCTAC 58.159 55.000 12.54 2.03 0.00 3.18
7073 8105 1.405821 CGTGCTTCCGAAGATCCTACT 59.594 52.381 12.54 0.00 0.00 2.57
7074 8106 2.541999 CGTGCTTCCGAAGATCCTACTC 60.542 54.545 12.54 0.00 0.00 2.59
7075 8107 2.032620 TGCTTCCGAAGATCCTACTCC 58.967 52.381 12.54 0.00 0.00 3.85
7076 8108 1.341852 GCTTCCGAAGATCCTACTCCC 59.658 57.143 12.54 0.00 0.00 4.30
7077 8109 2.952116 CTTCCGAAGATCCTACTCCCT 58.048 52.381 1.51 0.00 0.00 4.20
7078 8110 2.660670 TCCGAAGATCCTACTCCCTC 57.339 55.000 0.00 0.00 0.00 4.30
7079 8111 1.145325 TCCGAAGATCCTACTCCCTCC 59.855 57.143 0.00 0.00 0.00 4.30
7080 8112 1.240256 CGAAGATCCTACTCCCTCCG 58.760 60.000 0.00 0.00 0.00 4.63
7081 8113 1.477195 CGAAGATCCTACTCCCTCCGT 60.477 57.143 0.00 0.00 0.00 4.69
7082 8114 2.668625 GAAGATCCTACTCCCTCCGTT 58.331 52.381 0.00 0.00 0.00 4.44
7083 8115 2.850695 AGATCCTACTCCCTCCGTTT 57.149 50.000 0.00 0.00 0.00 3.60
7084 8116 2.668625 AGATCCTACTCCCTCCGTTTC 58.331 52.381 0.00 0.00 0.00 2.78
7085 8117 2.245287 AGATCCTACTCCCTCCGTTTCT 59.755 50.000 0.00 0.00 0.00 2.52
7086 8118 3.462579 AGATCCTACTCCCTCCGTTTCTA 59.537 47.826 0.00 0.00 0.00 2.10
7087 8119 3.744940 TCCTACTCCCTCCGTTTCTAA 57.255 47.619 0.00 0.00 0.00 2.10
7088 8120 4.051661 TCCTACTCCCTCCGTTTCTAAA 57.948 45.455 0.00 0.00 0.00 1.85
7089 8121 4.617593 TCCTACTCCCTCCGTTTCTAAAT 58.382 43.478 0.00 0.00 0.00 1.40
7090 8122 5.769835 TCCTACTCCCTCCGTTTCTAAATA 58.230 41.667 0.00 0.00 0.00 1.40
7091 8123 6.379579 TCCTACTCCCTCCGTTTCTAAATAT 58.620 40.000 0.00 0.00 0.00 1.28
7092 8124 6.842807 TCCTACTCCCTCCGTTTCTAAATATT 59.157 38.462 0.00 0.00 0.00 1.28
7093 8125 7.346436 TCCTACTCCCTCCGTTTCTAAATATTT 59.654 37.037 5.89 5.89 0.00 1.40
7094 8126 7.441458 CCTACTCCCTCCGTTTCTAAATATTTG 59.559 40.741 11.05 1.65 0.00 2.32
7095 8127 6.718294 ACTCCCTCCGTTTCTAAATATTTGT 58.282 36.000 11.05 0.00 0.00 2.83
7096 8128 6.822170 ACTCCCTCCGTTTCTAAATATTTGTC 59.178 38.462 11.05 0.00 0.00 3.18
7097 8129 6.954232 TCCCTCCGTTTCTAAATATTTGTCT 58.046 36.000 11.05 0.00 0.00 3.41
7098 8130 7.046033 TCCCTCCGTTTCTAAATATTTGTCTC 58.954 38.462 11.05 0.00 0.00 3.36
7099 8131 7.048512 CCCTCCGTTTCTAAATATTTGTCTCT 58.951 38.462 11.05 0.00 0.00 3.10
7100 8132 7.553044 CCCTCCGTTTCTAAATATTTGTCTCTT 59.447 37.037 11.05 0.00 0.00 2.85
7101 8133 8.947115 CCTCCGTTTCTAAATATTTGTCTCTTT 58.053 33.333 11.05 0.00 0.00 2.52
7118 8150 9.965824 TTGTCTCTTTAAAGATTTCAAATGGAC 57.034 29.630 18.02 16.74 33.93 4.02
7119 8151 9.354673 TGTCTCTTTAAAGATTTCAAATGGACT 57.645 29.630 18.02 0.00 33.93 3.85
7122 8154 9.780413 CTCTTTAAAGATTTCAAATGGACTAGC 57.220 33.333 18.02 0.00 33.93 3.42
7123 8155 9.295825 TCTTTAAAGATTTCAAATGGACTAGCA 57.704 29.630 13.99 0.00 0.00 3.49
7124 8156 9.346725 CTTTAAAGATTTCAAATGGACTAGCAC 57.653 33.333 9.77 0.00 0.00 4.40
7125 8157 6.899393 AAAGATTTCAAATGGACTAGCACA 57.101 33.333 0.00 0.00 0.00 4.57
7126 8158 7.472334 AAAGATTTCAAATGGACTAGCACAT 57.528 32.000 0.00 0.00 0.00 3.21
7127 8159 8.579850 AAAGATTTCAAATGGACTAGCACATA 57.420 30.769 0.00 0.00 0.00 2.29
7128 8160 7.559590 AGATTTCAAATGGACTAGCACATAC 57.440 36.000 0.00 0.00 0.00 2.39
7129 8161 7.112122 AGATTTCAAATGGACTAGCACATACA 58.888 34.615 0.00 0.00 0.00 2.29
7130 8162 7.611467 AGATTTCAAATGGACTAGCACATACAA 59.389 33.333 0.00 0.00 0.00 2.41
7131 8163 7.517614 TTTCAAATGGACTAGCACATACAAA 57.482 32.000 0.69 0.00 0.00 2.83
7132 8164 7.701539 TTCAAATGGACTAGCACATACAAAT 57.298 32.000 0.69 0.00 0.00 2.32
7133 8165 7.087409 TCAAATGGACTAGCACATACAAATG 57.913 36.000 0.69 0.00 39.17 2.32
7135 8167 7.826744 TCAAATGGACTAGCACATACAAATGTA 59.173 33.333 0.00 0.00 44.70 2.29
7136 8168 8.623903 CAAATGGACTAGCACATACAAATGTAT 58.376 33.333 0.21 0.21 44.70 2.29
7137 8169 9.845740 AAATGGACTAGCACATACAAATGTATA 57.154 29.630 5.78 0.00 44.70 1.47
7173 8205 9.677567 TTTAAAGTGTAGATTCACTCATTTTGC 57.322 29.630 0.00 0.00 46.25 3.68
7174 8206 7.516198 AAAGTGTAGATTCACTCATTTTGCT 57.484 32.000 0.00 0.00 46.25 3.91
7175 8207 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
7176 8208 5.349817 AGTGTAGATTCACTCATTTTGCTCG 59.650 40.000 0.00 0.00 44.07 5.03
7177 8209 5.120830 GTGTAGATTCACTCATTTTGCTCGT 59.879 40.000 0.00 0.00 35.68 4.18
7178 8210 4.675190 AGATTCACTCATTTTGCTCGTG 57.325 40.909 0.00 0.00 0.00 4.35
7179 8211 4.067896 AGATTCACTCATTTTGCTCGTGT 58.932 39.130 0.00 0.00 0.00 4.49
7180 8212 5.237815 AGATTCACTCATTTTGCTCGTGTA 58.762 37.500 0.00 0.00 0.00 2.90
7181 8213 4.990543 TTCACTCATTTTGCTCGTGTAG 57.009 40.909 0.00 0.00 0.00 2.74
7182 8214 3.990092 TCACTCATTTTGCTCGTGTAGT 58.010 40.909 0.00 0.00 0.00 2.73
7183 8215 3.987868 TCACTCATTTTGCTCGTGTAGTC 59.012 43.478 0.00 0.00 0.00 2.59
7184 8216 3.740832 CACTCATTTTGCTCGTGTAGTCA 59.259 43.478 0.00 0.00 0.00 3.41
7185 8217 3.741344 ACTCATTTTGCTCGTGTAGTCAC 59.259 43.478 0.00 0.00 40.79 3.67
7186 8218 3.990092 TCATTTTGCTCGTGTAGTCACT 58.010 40.909 0.00 0.00 41.89 3.41
7187 8219 4.377021 TCATTTTGCTCGTGTAGTCACTT 58.623 39.130 0.00 0.00 41.89 3.16
7188 8220 4.211164 TCATTTTGCTCGTGTAGTCACTTG 59.789 41.667 0.00 0.00 41.89 3.16
7189 8221 2.882927 TTGCTCGTGTAGTCACTTGT 57.117 45.000 0.00 0.00 41.89 3.16
7190 8222 2.882927 TGCTCGTGTAGTCACTTGTT 57.117 45.000 0.00 0.00 41.89 2.83
7191 8223 3.994204 TGCTCGTGTAGTCACTTGTTA 57.006 42.857 0.00 0.00 41.89 2.41
7192 8224 4.310357 TGCTCGTGTAGTCACTTGTTAA 57.690 40.909 0.00 0.00 41.89 2.01
7193 8225 4.684877 TGCTCGTGTAGTCACTTGTTAAA 58.315 39.130 0.00 0.00 41.89 1.52
7194 8226 5.110598 TGCTCGTGTAGTCACTTGTTAAAA 58.889 37.500 0.00 0.00 41.89 1.52
7195 8227 5.756347 TGCTCGTGTAGTCACTTGTTAAAAT 59.244 36.000 0.00 0.00 41.89 1.82
7196 8228 6.073980 TGCTCGTGTAGTCACTTGTTAAAATC 60.074 38.462 0.00 0.00 41.89 2.17
7197 8229 6.145696 GCTCGTGTAGTCACTTGTTAAAATCT 59.854 38.462 0.00 0.00 41.89 2.40
7198 8230 7.307219 GCTCGTGTAGTCACTTGTTAAAATCTT 60.307 37.037 0.00 0.00 41.89 2.40
7199 8231 8.428186 TCGTGTAGTCACTTGTTAAAATCTTT 57.572 30.769 0.00 0.00 41.89 2.52
7200 8232 9.531942 TCGTGTAGTCACTTGTTAAAATCTTTA 57.468 29.630 0.00 0.00 41.89 1.85
7201 8233 9.793245 CGTGTAGTCACTTGTTAAAATCTTTAG 57.207 33.333 0.00 0.00 41.89 1.85
7237 8269 7.589958 TTTAAAAACAGAGGGAGTATTTGCA 57.410 32.000 0.00 0.00 0.00 4.08
7238 8270 7.589958 TTAAAAACAGAGGGAGTATTTGCAA 57.410 32.000 0.00 0.00 0.00 4.08
7239 8271 6.478512 AAAAACAGAGGGAGTATTTGCAAA 57.521 33.333 15.44 15.44 0.00 3.68
7240 8272 6.478512 AAAACAGAGGGAGTATTTGCAAAA 57.521 33.333 17.19 2.96 0.00 2.44
7241 8273 6.670695 AAACAGAGGGAGTATTTGCAAAAT 57.329 33.333 17.19 5.25 0.00 1.82
7242 8274 5.649782 ACAGAGGGAGTATTTGCAAAATG 57.350 39.130 17.19 6.57 0.00 2.32
7243 8275 5.324409 ACAGAGGGAGTATTTGCAAAATGA 58.676 37.500 17.19 1.64 0.00 2.57
7244 8276 5.183904 ACAGAGGGAGTATTTGCAAAATGAC 59.816 40.000 17.19 14.08 0.00 3.06
7245 8277 5.183713 CAGAGGGAGTATTTGCAAAATGACA 59.816 40.000 17.19 0.00 0.00 3.58
7246 8278 5.416952 AGAGGGAGTATTTGCAAAATGACAG 59.583 40.000 17.19 0.00 0.00 3.51
7247 8279 4.082026 AGGGAGTATTTGCAAAATGACAGC 60.082 41.667 17.19 10.26 0.00 4.40
7248 8280 3.853671 GGAGTATTTGCAAAATGACAGCG 59.146 43.478 17.19 0.00 0.00 5.18
7249 8281 4.379394 GGAGTATTTGCAAAATGACAGCGA 60.379 41.667 17.19 0.00 0.00 4.93
7250 8282 5.119931 AGTATTTGCAAAATGACAGCGAA 57.880 34.783 17.19 0.00 36.21 4.70
7251 8283 4.917415 AGTATTTGCAAAATGACAGCGAAC 59.083 37.500 17.19 2.48 34.73 3.95
7252 8284 1.752753 TTGCAAAATGACAGCGAACG 58.247 45.000 0.00 0.00 0.00 3.95
7253 8285 0.040514 TGCAAAATGACAGCGAACGG 60.041 50.000 0.00 0.00 0.00 4.44
7254 8286 0.040425 GCAAAATGACAGCGAACGGT 60.040 50.000 0.00 0.00 0.00 4.83
7255 8287 1.599419 GCAAAATGACAGCGAACGGTT 60.599 47.619 0.00 0.00 0.00 4.44
7256 8288 2.726633 CAAAATGACAGCGAACGGTTT 58.273 42.857 0.00 0.00 0.00 3.27
7257 8289 2.399396 AAATGACAGCGAACGGTTTG 57.601 45.000 3.65 3.65 0.00 2.93
7258 8290 0.591170 AATGACAGCGAACGGTTTGG 59.409 50.000 10.03 0.00 0.00 3.28
7259 8291 1.852067 ATGACAGCGAACGGTTTGGC 61.852 55.000 10.03 9.53 36.73 4.52
7260 8292 3.249973 GACAGCGAACGGTTTGGCC 62.250 63.158 10.03 0.00 37.15 5.36
7269 8301 4.038080 GGTTTGGCCGTTCGCTGG 62.038 66.667 0.00 0.00 37.74 4.85
7270 8302 4.038080 GTTTGGCCGTTCGCTGGG 62.038 66.667 0.00 0.00 37.74 4.45
7276 8308 4.003788 CCGTTCGCTGGGGTGAGT 62.004 66.667 0.00 0.00 33.24 3.41
7277 8309 2.432628 CGTTCGCTGGGGTGAGTC 60.433 66.667 0.00 0.00 33.24 3.36
7278 8310 2.047179 GTTCGCTGGGGTGAGTCC 60.047 66.667 0.00 0.00 33.24 3.85
7279 8311 2.203788 TTCGCTGGGGTGAGTCCT 60.204 61.111 0.00 0.00 36.25 3.85
7280 8312 2.283529 TTCGCTGGGGTGAGTCCTC 61.284 63.158 0.00 0.00 37.17 3.71
7281 8313 4.135153 CGCTGGGGTGAGTCCTCG 62.135 72.222 0.00 0.00 40.23 4.63
7282 8314 4.459089 GCTGGGGTGAGTCCTCGC 62.459 72.222 0.00 0.00 40.23 5.03
7288 8320 4.500116 GTGAGTCCTCGCCTCCGC 62.500 72.222 0.00 0.00 34.22 5.54
7289 8321 4.742649 TGAGTCCTCGCCTCCGCT 62.743 66.667 0.00 0.00 0.00 5.52
7290 8322 2.516460 GAGTCCTCGCCTCCGCTA 60.516 66.667 0.00 0.00 0.00 4.26
7291 8323 1.899534 GAGTCCTCGCCTCCGCTAT 60.900 63.158 0.00 0.00 0.00 2.97
7292 8324 0.605860 GAGTCCTCGCCTCCGCTATA 60.606 60.000 0.00 0.00 0.00 1.31
7293 8325 0.178998 AGTCCTCGCCTCCGCTATAA 60.179 55.000 0.00 0.00 0.00 0.98
7294 8326 0.672342 GTCCTCGCCTCCGCTATAAA 59.328 55.000 0.00 0.00 0.00 1.40
7295 8327 1.068127 GTCCTCGCCTCCGCTATAAAA 59.932 52.381 0.00 0.00 0.00 1.52
7296 8328 1.758280 TCCTCGCCTCCGCTATAAAAA 59.242 47.619 0.00 0.00 0.00 1.94
7297 8329 1.865340 CCTCGCCTCCGCTATAAAAAC 59.135 52.381 0.00 0.00 0.00 2.43
7298 8330 2.546778 CTCGCCTCCGCTATAAAAACA 58.453 47.619 0.00 0.00 0.00 2.83
7299 8331 3.131396 CTCGCCTCCGCTATAAAAACAT 58.869 45.455 0.00 0.00 0.00 2.71
7300 8332 3.128349 TCGCCTCCGCTATAAAAACATC 58.872 45.455 0.00 0.00 0.00 3.06
7301 8333 3.131396 CGCCTCCGCTATAAAAACATCT 58.869 45.455 0.00 0.00 0.00 2.90
7302 8334 3.184581 CGCCTCCGCTATAAAAACATCTC 59.815 47.826 0.00 0.00 0.00 2.75
7303 8335 4.127171 GCCTCCGCTATAAAAACATCTCA 58.873 43.478 0.00 0.00 0.00 3.27
7304 8336 4.574828 GCCTCCGCTATAAAAACATCTCAA 59.425 41.667 0.00 0.00 0.00 3.02
7305 8337 5.065988 GCCTCCGCTATAAAAACATCTCAAA 59.934 40.000 0.00 0.00 0.00 2.69
7306 8338 6.404293 GCCTCCGCTATAAAAACATCTCAAAA 60.404 38.462 0.00 0.00 0.00 2.44
7307 8339 7.535139 CCTCCGCTATAAAAACATCTCAAAAA 58.465 34.615 0.00 0.00 0.00 1.94
7360 8392 4.901197 AAAAAGAAAACCACCACAACCT 57.099 36.364 0.00 0.00 0.00 3.50
7362 8394 4.994907 AAAGAAAACCACCACAACCTAC 57.005 40.909 0.00 0.00 0.00 3.18
7363 8395 3.945640 AGAAAACCACCACAACCTACT 57.054 42.857 0.00 0.00 0.00 2.57
7364 8396 5.376756 AAGAAAACCACCACAACCTACTA 57.623 39.130 0.00 0.00 0.00 1.82
7365 8397 4.969484 AGAAAACCACCACAACCTACTAG 58.031 43.478 0.00 0.00 0.00 2.57
7366 8398 2.853235 AACCACCACAACCTACTAGC 57.147 50.000 0.00 0.00 0.00 3.42
7367 8399 0.606604 ACCACCACAACCTACTAGCG 59.393 55.000 0.00 0.00 0.00 4.26
7368 8400 0.892755 CCACCACAACCTACTAGCGA 59.107 55.000 0.00 0.00 0.00 4.93
7369 8401 1.135083 CCACCACAACCTACTAGCGAG 60.135 57.143 0.00 0.00 0.00 5.03
7370 8402 1.544691 CACCACAACCTACTAGCGAGT 59.455 52.381 4.47 4.47 39.92 4.18
7371 8403 1.544691 ACCACAACCTACTAGCGAGTG 59.455 52.381 10.02 0.00 36.28 3.51
7372 8404 1.630148 CACAACCTACTAGCGAGTGC 58.370 55.000 10.02 0.00 43.24 4.40
7373 8405 0.531200 ACAACCTACTAGCGAGTGCC 59.469 55.000 10.02 0.00 44.31 5.01
7374 8406 0.530744 CAACCTACTAGCGAGTGCCA 59.469 55.000 10.02 0.00 44.31 4.92
7375 8407 0.531200 AACCTACTAGCGAGTGCCAC 59.469 55.000 10.02 0.00 44.31 5.01
7376 8408 0.323542 ACCTACTAGCGAGTGCCACT 60.324 55.000 10.02 0.00 44.31 4.00
7377 8409 0.818296 CCTACTAGCGAGTGCCACTT 59.182 55.000 10.02 0.00 44.31 3.16
7378 8410 1.204941 CCTACTAGCGAGTGCCACTTT 59.795 52.381 10.02 0.00 44.31 2.66
7379 8411 2.263077 CTACTAGCGAGTGCCACTTTG 58.737 52.381 10.02 0.00 44.31 2.77
7380 8412 0.951040 ACTAGCGAGTGCCACTTTGC 60.951 55.000 13.31 13.31 44.31 3.68
7381 8413 0.950555 CTAGCGAGTGCCACTTTGCA 60.951 55.000 20.52 9.22 44.31 4.08
7382 8414 0.321564 TAGCGAGTGCCACTTTGCAT 60.322 50.000 20.52 10.96 44.30 3.96
7383 8415 0.321564 AGCGAGTGCCACTTTGCATA 60.322 50.000 20.52 0.00 44.30 3.14
7384 8416 0.521291 GCGAGTGCCACTTTGCATAA 59.479 50.000 15.52 0.00 44.30 1.90
7385 8417 1.729149 GCGAGTGCCACTTTGCATAAC 60.729 52.381 15.52 0.00 44.30 1.89
7386 8418 1.135689 CGAGTGCCACTTTGCATAACC 60.136 52.381 0.00 0.00 44.30 2.85
7387 8419 1.202348 GAGTGCCACTTTGCATAACCC 59.798 52.381 0.00 0.00 44.30 4.11
7388 8420 1.203050 AGTGCCACTTTGCATAACCCT 60.203 47.619 0.00 0.00 44.30 4.34
7389 8421 1.618343 GTGCCACTTTGCATAACCCTT 59.382 47.619 0.00 0.00 44.30 3.95
7390 8422 1.892474 TGCCACTTTGCATAACCCTTC 59.108 47.619 0.00 0.00 36.04 3.46
7391 8423 1.892474 GCCACTTTGCATAACCCTTCA 59.108 47.619 0.00 0.00 0.00 3.02
7392 8424 2.497273 GCCACTTTGCATAACCCTTCAT 59.503 45.455 0.00 0.00 0.00 2.57
7393 8425 3.055891 GCCACTTTGCATAACCCTTCATT 60.056 43.478 0.00 0.00 0.00 2.57
7394 8426 4.563374 GCCACTTTGCATAACCCTTCATTT 60.563 41.667 0.00 0.00 0.00 2.32
7395 8427 5.337169 GCCACTTTGCATAACCCTTCATTTA 60.337 40.000 0.00 0.00 0.00 1.40
7396 8428 6.696411 CCACTTTGCATAACCCTTCATTTAA 58.304 36.000 0.00 0.00 0.00 1.52
7397 8429 7.158021 CCACTTTGCATAACCCTTCATTTAAA 58.842 34.615 0.00 0.00 0.00 1.52
7398 8430 7.659390 CCACTTTGCATAACCCTTCATTTAAAA 59.341 33.333 0.00 0.00 0.00 1.52
7399 8431 9.050601 CACTTTGCATAACCCTTCATTTAAAAA 57.949 29.630 0.00 0.00 0.00 1.94
7429 8461 4.569719 GGTCCTCACCTCCATCTAAAAA 57.430 45.455 0.00 0.00 40.00 1.94
7430 8462 4.518249 GGTCCTCACCTCCATCTAAAAAG 58.482 47.826 0.00 0.00 40.00 2.27
7431 8463 4.225267 GGTCCTCACCTCCATCTAAAAAGA 59.775 45.833 0.00 0.00 40.00 2.52
7432 8464 5.280521 GGTCCTCACCTCCATCTAAAAAGAA 60.281 44.000 0.00 0.00 40.00 2.52
7433 8465 6.238648 GTCCTCACCTCCATCTAAAAAGAAA 58.761 40.000 0.00 0.00 0.00 2.52
7434 8466 6.715264 GTCCTCACCTCCATCTAAAAAGAAAA 59.285 38.462 0.00 0.00 0.00 2.29
7435 8467 7.230712 GTCCTCACCTCCATCTAAAAAGAAAAA 59.769 37.037 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
131 132 2.287368 GGTGTTCGGTGGATTTTGACAC 60.287 50.000 0.00 0.00 36.89 3.67
139 140 2.656069 CGGAGGGTGTTCGGTGGAT 61.656 63.158 0.00 0.00 0.00 3.41
235 236 1.069765 CTATCGTTCTGGGCGGCAT 59.930 57.895 12.47 0.00 0.00 4.40
444 454 6.404513 CGACCCTCTACTAAAGAAGACGAAAT 60.405 42.308 0.00 0.00 32.46 2.17
490 501 6.187727 ACAGGAATGATAAACGGGTCATAT 57.812 37.500 0.00 0.00 34.14 1.78
491 502 5.623956 ACAGGAATGATAAACGGGTCATA 57.376 39.130 0.00 0.00 34.14 2.15
537 549 1.799544 TCTTTTCGAGCGGTAAACCC 58.200 50.000 0.00 0.00 0.00 4.11
549 561 9.291664 CCTACTCTCTACAGTATTTTCTTTTCG 57.708 37.037 0.00 0.00 0.00 3.46
550 562 9.589111 CCCTACTCTCTACAGTATTTTCTTTTC 57.411 37.037 0.00 0.00 0.00 2.29
555 567 6.183360 CCCACCCTACTCTCTACAGTATTTTC 60.183 46.154 0.00 0.00 0.00 2.29
558 570 4.232354 ACCCACCCTACTCTCTACAGTATT 59.768 45.833 0.00 0.00 0.00 1.89
598 610 2.564721 GCAGTGTCTTTGCCACCCC 61.565 63.158 0.00 0.00 35.54 4.95
607 619 3.995199 TCTTCAGAAATCGCAGTGTCTT 58.005 40.909 0.00 0.00 0.00 3.01
673 685 2.816012 GGCTAAGGGCGGACTCTC 59.184 66.667 0.00 0.00 42.94 3.20
768 780 3.155470 GATCATTGCGTGCCGTCCG 62.155 63.158 0.00 0.00 0.00 4.79
769 781 2.709475 GATCATTGCGTGCCGTCC 59.291 61.111 0.00 0.00 0.00 4.79
770 782 1.490693 ATCGATCATTGCGTGCCGTC 61.491 55.000 0.00 0.00 0.00 4.79
771 783 1.490693 GATCGATCATTGCGTGCCGT 61.491 55.000 20.52 0.00 0.00 5.68
772 784 1.202568 GATCGATCATTGCGTGCCG 59.797 57.895 20.52 0.00 0.00 5.69
773 785 1.202568 CGATCGATCATTGCGTGCC 59.797 57.895 24.40 0.00 0.00 5.01
774 786 1.437735 GCGATCGATCATTGCGTGC 60.438 57.895 24.40 13.81 31.85 5.34
874 890 0.981943 CCCGGTTGGTACTCTCCTTT 59.018 55.000 0.00 0.00 0.00 3.11
943 959 2.047274 CCGGTTGCACAGATCCGT 60.047 61.111 0.00 0.00 41.17 4.69
1279 1301 3.085533 CCCGATTGGTGTTGGTAATGAA 58.914 45.455 0.00 0.00 0.00 2.57
1292 1319 6.699575 ATCTGAAATTCTAAACCCGATTGG 57.300 37.500 0.00 0.00 41.37 3.16
1317 1344 5.419788 ACATGGGTACGACTAGTCAAACATA 59.580 40.000 22.37 11.57 0.00 2.29
1331 1358 3.427638 CGGAGCATAGATACATGGGTACG 60.428 52.174 0.00 0.00 30.94 3.67
1335 1362 2.416027 CGACGGAGCATAGATACATGGG 60.416 54.545 0.00 0.00 0.00 4.00
1342 1369 5.692204 CAGTTTAAATCGACGGAGCATAGAT 59.308 40.000 0.00 0.00 0.00 1.98
1343 1370 5.041287 CAGTTTAAATCGACGGAGCATAGA 58.959 41.667 0.00 0.00 0.00 1.98
1344 1371 4.209288 CCAGTTTAAATCGACGGAGCATAG 59.791 45.833 0.00 0.00 0.00 2.23
1345 1372 4.116961 CCAGTTTAAATCGACGGAGCATA 58.883 43.478 0.00 0.00 0.00 3.14
1346 1373 2.936498 CCAGTTTAAATCGACGGAGCAT 59.064 45.455 0.00 0.00 0.00 3.79
1347 1374 2.028839 TCCAGTTTAAATCGACGGAGCA 60.029 45.455 0.00 0.00 0.00 4.26
1348 1375 2.613691 TCCAGTTTAAATCGACGGAGC 58.386 47.619 0.00 0.00 0.00 4.70
1349 1376 3.617263 CCTTCCAGTTTAAATCGACGGAG 59.383 47.826 0.00 0.00 0.00 4.63
1350 1377 3.258872 TCCTTCCAGTTTAAATCGACGGA 59.741 43.478 0.00 0.00 0.00 4.69
1351 1378 3.592059 TCCTTCCAGTTTAAATCGACGG 58.408 45.455 0.00 0.00 0.00 4.79
1352 1379 5.560148 CATTCCTTCCAGTTTAAATCGACG 58.440 41.667 0.00 0.00 0.00 5.12
1361 1399 6.071320 AGACTTAAAGCATTCCTTCCAGTTT 58.929 36.000 0.00 0.00 31.99 2.66
1451 1493 9.388506 GAACATAGGTATATGCAATTCATAGCT 57.611 33.333 13.61 13.61 42.26 3.32
1452 1494 9.388506 AGAACATAGGTATATGCAATTCATAGC 57.611 33.333 0.00 0.00 42.26 2.97
1492 1534 5.139435 TCAAGACCACTATCAGTCACTTG 57.861 43.478 0.00 0.00 35.38 3.16
1568 1610 3.496131 TCATCGAAAAGGCCGCGC 61.496 61.111 0.00 0.00 0.00 6.86
1583 1625 5.551233 CTCCCAACTTGATTGAAGTAGTCA 58.449 41.667 0.00 0.00 44.68 3.41
1675 1717 2.215942 AAACTAAGGGCCAAATCGCT 57.784 45.000 6.18 0.00 0.00 4.93
1676 1718 2.416836 GGAAAACTAAGGGCCAAATCGC 60.417 50.000 6.18 0.00 0.00 4.58
1677 1719 3.089284 AGGAAAACTAAGGGCCAAATCG 58.911 45.455 6.18 0.00 0.00 3.34
1678 1720 3.195610 CCAGGAAAACTAAGGGCCAAATC 59.804 47.826 6.18 0.00 0.00 2.17
1680 1722 2.178106 TCCAGGAAAACTAAGGGCCAAA 59.822 45.455 6.18 0.00 0.00 3.28
1681 1723 1.783979 TCCAGGAAAACTAAGGGCCAA 59.216 47.619 6.18 0.00 0.00 4.52
1684 1952 6.791867 AAAATATCCAGGAAAACTAAGGGC 57.208 37.500 0.00 0.00 0.00 5.19
1775 2043 1.194781 ACCACCTCTGCCATCGAAGT 61.195 55.000 0.00 0.00 0.00 3.01
1916 2184 1.063912 TGACACAAGAAAGTGCGCAAG 59.936 47.619 14.00 0.00 43.23 4.01
1962 2230 4.533919 TTGACAATTTTGGCCATCGAAT 57.466 36.364 6.09 4.88 34.48 3.34
1984 2252 9.022884 TCAACATAGTCCATCAAATTGAAATCA 57.977 29.630 0.00 0.00 0.00 2.57
2065 2333 8.067488 ACCAATACCATTCTTAGGGAAATGAAT 58.933 33.333 0.00 0.00 37.49 2.57
2073 2341 5.388599 AGGAACCAATACCATTCTTAGGG 57.611 43.478 0.00 0.00 0.00 3.53
2080 2348 3.192633 GTCGCAAAGGAACCAATACCATT 59.807 43.478 0.00 0.00 0.00 3.16
2081 2349 2.752903 GTCGCAAAGGAACCAATACCAT 59.247 45.455 0.00 0.00 0.00 3.55
2118 2386 8.488651 AAGTAATTACAATCTACCTGTTTCCG 57.511 34.615 17.65 0.00 0.00 4.30
2178 2446 9.961265 ATTAGTGAAATGATATGAACAGCAATG 57.039 29.630 0.00 0.00 0.00 2.82
2194 2462 7.803189 CGCTGTCAAGTAACAAATTAGTGAAAT 59.197 33.333 0.00 0.00 0.00 2.17
2405 2673 1.538419 GGCCGGCATCTACTTACAGAC 60.538 57.143 30.85 0.45 0.00 3.51
2588 2856 1.802636 CTTGTATTGTGCCCCTGCG 59.197 57.895 0.00 0.00 41.78 5.18
2682 2951 9.686683 ATACTATGTGATAGCCTCAAACTTTTT 57.313 29.630 0.00 0.00 35.07 1.94
2723 2992 5.070770 AGAACTCTGTCTAGAATGTGCAG 57.929 43.478 0.00 0.00 31.21 4.41
2860 3129 8.292444 TGAGTTAATTCCCATCCAAATACAAG 57.708 34.615 0.00 0.00 0.00 3.16
2870 3139 7.428826 GGATCAAACATGAGTTAATTCCCATC 58.571 38.462 0.00 0.00 36.84 3.51
2914 3183 8.450964 TCTTGCTTATATTTTGCACTTCACTAC 58.549 33.333 0.00 0.00 36.37 2.73
2915 3184 8.560355 TCTTGCTTATATTTTGCACTTCACTA 57.440 30.769 0.00 0.00 36.37 2.74
2919 3188 8.023128 TGTTCTCTTGCTTATATTTTGCACTTC 58.977 33.333 0.00 0.00 36.37 3.01
2922 3191 7.970061 TGATGTTCTCTTGCTTATATTTTGCAC 59.030 33.333 0.00 0.00 36.37 4.57
2966 3235 1.754803 TCGATCTACACCGAATGGCTT 59.245 47.619 0.00 0.00 39.70 4.35
3024 3293 9.725019 TGACTACATAACAAAATGAGTGAATCT 57.275 29.630 0.00 0.00 0.00 2.40
3025 3294 9.760660 GTGACTACATAACAAAATGAGTGAATC 57.239 33.333 0.00 0.00 0.00 2.52
3026 3295 9.507329 AGTGACTACATAACAAAATGAGTGAAT 57.493 29.630 0.00 0.00 0.00 2.57
3027 3296 8.902540 AGTGACTACATAACAAAATGAGTGAA 57.097 30.769 0.00 0.00 0.00 3.18
3028 3297 8.773645 CAAGTGACTACATAACAAAATGAGTGA 58.226 33.333 0.00 0.00 0.00 3.41
3029 3298 8.559536 ACAAGTGACTACATAACAAAATGAGTG 58.440 33.333 0.00 0.00 0.00 3.51
3030 3299 8.677148 ACAAGTGACTACATAACAAAATGAGT 57.323 30.769 0.00 0.00 0.00 3.41
3031 3300 9.385902 CAACAAGTGACTACATAACAAAATGAG 57.614 33.333 0.00 0.00 0.00 2.90
3032 3301 8.349245 CCAACAAGTGACTACATAACAAAATGA 58.651 33.333 0.00 0.00 0.00 2.57
3033 3302 8.349245 TCCAACAAGTGACTACATAACAAAATG 58.651 33.333 0.00 0.00 0.00 2.32
3034 3303 8.458573 TCCAACAAGTGACTACATAACAAAAT 57.541 30.769 0.00 0.00 0.00 1.82
3035 3304 7.867305 TCCAACAAGTGACTACATAACAAAA 57.133 32.000 0.00 0.00 0.00 2.44
3036 3305 7.867305 TTCCAACAAGTGACTACATAACAAA 57.133 32.000 0.00 0.00 0.00 2.83
3037 3306 7.936847 AGATTCCAACAAGTGACTACATAACAA 59.063 33.333 0.00 0.00 0.00 2.83
3038 3307 7.450074 AGATTCCAACAAGTGACTACATAACA 58.550 34.615 0.00 0.00 0.00 2.41
3039 3308 7.819900 AGAGATTCCAACAAGTGACTACATAAC 59.180 37.037 0.00 0.00 0.00 1.89
3040 3309 7.907389 AGAGATTCCAACAAGTGACTACATAA 58.093 34.615 0.00 0.00 0.00 1.90
3041 3310 7.482169 AGAGATTCCAACAAGTGACTACATA 57.518 36.000 0.00 0.00 0.00 2.29
3042 3311 6.365970 AGAGATTCCAACAAGTGACTACAT 57.634 37.500 0.00 0.00 0.00 2.29
3043 3312 5.808366 AGAGATTCCAACAAGTGACTACA 57.192 39.130 0.00 0.00 0.00 2.74
3044 3313 7.159322 TCTAGAGATTCCAACAAGTGACTAC 57.841 40.000 0.00 0.00 0.00 2.73
3045 3314 7.776618 TTCTAGAGATTCCAACAAGTGACTA 57.223 36.000 0.00 0.00 0.00 2.59
3046 3315 6.672266 TTCTAGAGATTCCAACAAGTGACT 57.328 37.500 0.00 0.00 0.00 3.41
3047 3316 7.117092 GTCTTTCTAGAGATTCCAACAAGTGAC 59.883 40.741 0.00 0.00 0.00 3.67
3048 3317 7.155328 GTCTTTCTAGAGATTCCAACAAGTGA 58.845 38.462 0.00 0.00 0.00 3.41
3049 3318 6.931281 TGTCTTTCTAGAGATTCCAACAAGTG 59.069 38.462 0.00 0.00 0.00 3.16
3050 3319 7.067496 TGTCTTTCTAGAGATTCCAACAAGT 57.933 36.000 0.00 0.00 0.00 3.16
3051 3320 7.969536 TTGTCTTTCTAGAGATTCCAACAAG 57.030 36.000 0.00 0.00 0.00 3.16
3052 3321 8.924511 ATTTGTCTTTCTAGAGATTCCAACAA 57.075 30.769 0.00 0.00 0.00 2.83
3063 3332 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
3064 3333 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
3065 3334 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
3066 3335 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
3067 3336 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
3068 3337 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
3069 3338 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
3070 3339 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
3071 3340 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
3072 3341 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
3073 3342 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
3074 3343 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
3075 3344 5.901276 TGTACTCCCTCCGTTCCTAAATATT 59.099 40.000 0.00 0.00 0.00 1.28
3076 3345 5.461327 TGTACTCCCTCCGTTCCTAAATAT 58.539 41.667 0.00 0.00 0.00 1.28
3077 3346 4.870636 TGTACTCCCTCCGTTCCTAAATA 58.129 43.478 0.00 0.00 0.00 1.40
3078 3347 3.716431 TGTACTCCCTCCGTTCCTAAAT 58.284 45.455 0.00 0.00 0.00 1.40
3079 3348 3.173953 TGTACTCCCTCCGTTCCTAAA 57.826 47.619 0.00 0.00 0.00 1.85
3080 3349 2.905415 TGTACTCCCTCCGTTCCTAA 57.095 50.000 0.00 0.00 0.00 2.69
3081 3350 4.524802 TTATGTACTCCCTCCGTTCCTA 57.475 45.455 0.00 0.00 0.00 2.94
3082 3351 3.393426 TTATGTACTCCCTCCGTTCCT 57.607 47.619 0.00 0.00 0.00 3.36
3083 3352 4.220163 CCTATTATGTACTCCCTCCGTTCC 59.780 50.000 0.00 0.00 0.00 3.62
3084 3353 5.048154 GTCCTATTATGTACTCCCTCCGTTC 60.048 48.000 0.00 0.00 0.00 3.95
3085 3354 4.831710 GTCCTATTATGTACTCCCTCCGTT 59.168 45.833 0.00 0.00 0.00 4.44
3086 3355 4.141088 TGTCCTATTATGTACTCCCTCCGT 60.141 45.833 0.00 0.00 0.00 4.69
3087 3356 4.404640 TGTCCTATTATGTACTCCCTCCG 58.595 47.826 0.00 0.00 0.00 4.63
3088 3357 5.477637 GTCTGTCCTATTATGTACTCCCTCC 59.522 48.000 0.00 0.00 0.00 4.30
3089 3358 6.308566 AGTCTGTCCTATTATGTACTCCCTC 58.691 44.000 0.00 0.00 0.00 4.30
3090 3359 6.282568 AGTCTGTCCTATTATGTACTCCCT 57.717 41.667 0.00 0.00 0.00 4.20
3091 3360 8.474710 TTTAGTCTGTCCTATTATGTACTCCC 57.525 38.462 0.00 0.00 0.00 4.30
3092 3361 8.083462 GCTTTAGTCTGTCCTATTATGTACTCC 58.917 40.741 0.00 0.00 0.00 3.85
3093 3362 8.083462 GGCTTTAGTCTGTCCTATTATGTACTC 58.917 40.741 0.00 0.00 0.00 2.59
3094 3363 7.785506 AGGCTTTAGTCTGTCCTATTATGTACT 59.214 37.037 0.00 0.00 0.00 2.73
3095 3364 7.953752 AGGCTTTAGTCTGTCCTATTATGTAC 58.046 38.462 0.00 0.00 0.00 2.90
3136 3405 7.037873 TGCTAACTTTTTAGTATTCCTCTGGGA 60.038 37.037 0.00 0.00 37.59 4.37
3189 3458 7.777440 TTGTAAGCACAATAATGGATGGATACA 59.223 33.333 0.00 0.00 45.87 2.29
3353 3622 2.189594 ATTGCACAAGCTGTAGCAGA 57.810 45.000 6.65 1.32 45.16 4.26
3609 3881 0.252974 TGAGGGGCTTAGTGGGCTAA 60.253 55.000 0.00 0.00 35.98 3.09
3646 3918 4.694339 GAACCTGTGTACTTCTGACAAGT 58.306 43.478 0.00 0.00 0.00 3.16
3711 3984 9.305925 AGAAAGATCTTTGCAAAGTAACAAAAG 57.694 29.630 32.46 10.47 35.49 2.27
3762 4035 5.130975 TGGTACTCACATATCCAGAAGCATT 59.869 40.000 0.00 0.00 0.00 3.56
3819 4099 8.553459 TCTAAGAATTTTACAAAGGAGCTCAG 57.447 34.615 17.19 4.62 0.00 3.35
3868 4150 8.844244 AGCCTTAATTAACTGTGATTGATCATC 58.156 33.333 0.00 0.00 39.30 2.92
3869 4151 8.627403 CAGCCTTAATTAACTGTGATTGATCAT 58.373 33.333 0.00 0.00 39.30 2.45
3870 4155 7.415541 GCAGCCTTAATTAACTGTGATTGATCA 60.416 37.037 14.11 0.00 32.65 2.92
3871 4156 6.914757 GCAGCCTTAATTAACTGTGATTGATC 59.085 38.462 14.11 0.00 32.65 2.92
3876 4161 4.860022 AGGCAGCCTTAATTAACTGTGAT 58.140 39.130 8.70 2.65 32.65 3.06
3877 4162 4.301072 AGGCAGCCTTAATTAACTGTGA 57.699 40.909 8.70 0.00 32.65 3.58
3878 4163 4.702131 AGAAGGCAGCCTTAATTAACTGTG 59.298 41.667 27.49 5.19 44.82 3.66
3879 4164 4.923415 AGAAGGCAGCCTTAATTAACTGT 58.077 39.130 27.49 0.00 44.82 3.55
3880 4165 6.543831 ACATAGAAGGCAGCCTTAATTAACTG 59.456 38.462 27.49 17.70 44.82 3.16
3881 4166 6.663734 ACATAGAAGGCAGCCTTAATTAACT 58.336 36.000 27.49 19.56 44.82 2.24
3882 4167 6.944234 ACATAGAAGGCAGCCTTAATTAAC 57.056 37.500 27.49 13.21 44.82 2.01
3883 4168 7.665559 CCATACATAGAAGGCAGCCTTAATTAA 59.334 37.037 27.49 11.41 44.82 1.40
3884 4169 7.168219 CCATACATAGAAGGCAGCCTTAATTA 58.832 38.462 27.49 18.63 44.82 1.40
3885 4170 6.006449 CCATACATAGAAGGCAGCCTTAATT 58.994 40.000 27.49 17.12 44.82 1.40
3886 4171 5.073691 ACCATACATAGAAGGCAGCCTTAAT 59.926 40.000 27.49 19.53 44.82 1.40
4053 4344 7.933577 CCAGCTACTCATCAAGGAAATTGTATA 59.066 37.037 0.00 0.00 40.05 1.47
4176 4469 7.591165 CATGCTCTTTCCCATACATGAAATAG 58.409 38.462 0.00 0.00 37.65 1.73
4370 4716 4.714802 TCTAGGCACATACCAACAGTACAT 59.285 41.667 0.00 0.00 32.46 2.29
4393 4739 5.411669 CCTACTAGCCAAACAACGAGAATTT 59.588 40.000 0.00 0.00 0.00 1.82
4602 4962 2.363680 CCACACTTTACCAACATGGCAA 59.636 45.455 0.00 0.00 42.67 4.52
4640 5000 6.884832 TCCTCGGATTGTGTTATTTATGTCT 58.115 36.000 0.00 0.00 0.00 3.41
4658 5018 0.798776 GTTGCTTGTGACATCCTCGG 59.201 55.000 0.00 0.00 0.00 4.63
4659 5019 1.800805 AGTTGCTTGTGACATCCTCG 58.199 50.000 0.00 0.00 0.00 4.63
4695 5055 9.640963 ATGAGACTAAACTACACTGTGAATTAC 57.359 33.333 15.86 0.00 0.00 1.89
4773 5172 6.000219 ACCTAATGGACAGACATGCATATTC 59.000 40.000 0.00 0.00 37.04 1.75
4810 5209 1.798223 TCGTCTGCATCTTCAAAACGG 59.202 47.619 0.00 0.00 0.00 4.44
4934 5333 6.542821 TGCCCACCCTAAAGATCATATTAAG 58.457 40.000 0.00 0.00 0.00 1.85
4957 5363 2.285083 TCGTCTGTTGGTTTGTCCTTG 58.715 47.619 0.00 0.00 37.07 3.61
4982 5388 5.352569 CAGCTATCTGAAACGAGGAATTGTT 59.647 40.000 0.00 0.00 42.95 2.83
5054 5460 2.689983 CTGGGCACTGTTTGAATATCCC 59.310 50.000 0.00 0.00 0.00 3.85
5268 5885 5.042463 TGTGGTTCAGACATGGAAGTAAA 57.958 39.130 0.00 0.00 0.00 2.01
5292 5909 9.897744 TGCATGTTTTAGATTTAGAAAGAACTG 57.102 29.630 0.00 0.00 0.00 3.16
5428 6045 6.954352 ATATGGGAGGAAGGGAGTATAAAC 57.046 41.667 0.00 0.00 0.00 2.01
5459 6076 6.588348 TTCAGTGATACATATGTTTCAGCG 57.412 37.500 23.97 18.48 36.84 5.18
5469 6086 7.754851 TCTAGGCGTATTTCAGTGATACATA 57.245 36.000 0.00 0.00 31.75 2.29
5495 6112 9.858247 CATATTAATTGATGCTGAAACAAATGC 57.142 29.630 0.00 0.00 0.00 3.56
5509 6126 6.044404 ACTCCTTCCGTCCCATATTAATTGAT 59.956 38.462 0.00 0.00 0.00 2.57
5554 6171 6.729187 GGATACAAGGAATTGTATTGCACTC 58.271 40.000 13.27 2.97 45.25 3.51
5774 6433 5.869579 ACAGAGAGTGGAAAAGCATTTCTA 58.130 37.500 13.60 5.39 43.65 2.10
5836 6496 1.278637 GCGTTTTGTGGGAGTGTCG 59.721 57.895 0.00 0.00 0.00 4.35
5861 6521 6.369629 TCTTCCTTTTTGACAGGGAACAATA 58.630 36.000 0.00 0.00 34.61 1.90
5943 6604 7.524294 ACAAATGATGAAAAGAAACACACAC 57.476 32.000 0.00 0.00 0.00 3.82
5945 6606 9.476761 GAAAACAAATGATGAAAAGAAACACAC 57.523 29.630 0.00 0.00 0.00 3.82
5946 6609 9.434420 AGAAAACAAATGATGAAAAGAAACACA 57.566 25.926 0.00 0.00 0.00 3.72
5989 6652 4.223255 AGGACCTAGGAAGCAGTCTTAAAC 59.777 45.833 17.98 0.00 31.48 2.01
6002 6665 6.842280 TGCTAAATGTTATGTAGGACCTAGGA 59.158 38.462 17.98 0.00 0.00 2.94
6003 6666 6.929606 GTGCTAAATGTTATGTAGGACCTAGG 59.070 42.308 7.41 7.41 31.96 3.02
6004 6667 6.929606 GGTGCTAAATGTTATGTAGGACCTAG 59.070 42.308 17.57 0.00 46.93 3.02
6005 6668 6.823497 GGTGCTAAATGTTATGTAGGACCTA 58.177 40.000 17.57 0.00 46.93 3.08
6006 6669 5.681639 GGTGCTAAATGTTATGTAGGACCT 58.318 41.667 17.57 0.00 46.93 3.85
6008 6671 5.433526 TGGGTGCTAAATGTTATGTAGGAC 58.566 41.667 2.98 2.98 35.97 3.85
6021 6684 0.329261 ATGCTGCTCTGGGTGCTAAA 59.671 50.000 0.00 0.00 0.00 1.85
6029 6692 5.919141 GCTATTTCAAATAATGCTGCTCTGG 59.081 40.000 0.00 0.00 0.00 3.86
6041 6704 9.623000 GTCCTTAGTTTAGGGCTATTTCAAATA 57.377 33.333 0.00 0.00 36.95 1.40
6132 6799 1.018910 ACTTGCCAAACGTACACACC 58.981 50.000 0.00 0.00 0.00 4.16
6136 6803 4.355437 CATTTTCACTTGCCAAACGTACA 58.645 39.130 0.00 0.00 0.00 2.90
6217 6884 9.192642 TGTAGTGACTATTAATTACTACTGCCA 57.807 33.333 20.42 10.17 42.43 4.92
6235 6902 6.757010 CACATGGAAAGGTACTATGTAGTGAC 59.243 42.308 0.00 0.00 38.49 3.67
6350 7022 4.352039 GAATGATCATTCACAGCTGCAAG 58.648 43.478 33.70 4.15 44.89 4.01
6556 7228 8.353423 ACCAATTAAGATTTGCAAGACATAGT 57.647 30.769 0.00 0.00 0.00 2.12
6563 7235 5.697633 AGTGCAACCAATTAAGATTTGCAAG 59.302 36.000 14.56 0.00 37.91 4.01
6586 7258 4.758688 TGTCTCACAGCCATGTATGTAAG 58.241 43.478 0.17 0.00 37.65 2.34
6587 7259 4.817318 TGTCTCACAGCCATGTATGTAA 57.183 40.909 0.17 0.00 37.65 2.41
6595 7267 3.087031 CCTTGATTTGTCTCACAGCCAT 58.913 45.455 0.00 0.00 0.00 4.40
6669 7342 3.181479 ACGACAACTACAAGCACTGAAGA 60.181 43.478 0.00 0.00 0.00 2.87
6691 7364 7.931015 ACATCCAGATTTATAGACCACCTAA 57.069 36.000 0.00 0.00 0.00 2.69
6891 7610 7.062749 ACACAATTTTCTGTCAGTAGTCCTA 57.937 36.000 0.00 0.00 0.00 2.94
6892 7611 5.930135 ACACAATTTTCTGTCAGTAGTCCT 58.070 37.500 0.00 0.00 0.00 3.85
6895 7614 7.499232 AGCTAAACACAATTTTCTGTCAGTAGT 59.501 33.333 0.00 0.00 0.00 2.73
7008 8038 2.349755 GGCTACCTCGCCCACAAA 59.650 61.111 0.00 0.00 44.41 2.83
7029 8061 1.063567 AGGCGAGTCCTTCTAGACCAT 60.064 52.381 0.00 0.00 44.75 3.55
7068 8100 6.667558 ATATTTAGAAACGGAGGGAGTAGG 57.332 41.667 0.00 0.00 0.00 3.18
7070 8102 7.854337 ACAAATATTTAGAAACGGAGGGAGTA 58.146 34.615 0.00 0.00 0.00 2.59
7071 8103 6.718294 ACAAATATTTAGAAACGGAGGGAGT 58.282 36.000 0.00 0.00 0.00 3.85
7072 8104 7.048512 AGACAAATATTTAGAAACGGAGGGAG 58.951 38.462 0.00 0.00 0.00 4.30
7073 8105 6.954232 AGACAAATATTTAGAAACGGAGGGA 58.046 36.000 0.00 0.00 0.00 4.20
7074 8106 7.048512 AGAGACAAATATTTAGAAACGGAGGG 58.951 38.462 0.00 0.00 0.00 4.30
7075 8107 8.494016 AAGAGACAAATATTTAGAAACGGAGG 57.506 34.615 0.00 0.00 0.00 4.30
7092 8124 9.965824 GTCCATTTGAAATCTTTAAAGAGACAA 57.034 29.630 21.75 20.91 38.66 3.18
7093 8125 9.354673 AGTCCATTTGAAATCTTTAAAGAGACA 57.645 29.630 21.75 17.21 38.66 3.41
7096 8128 9.780413 GCTAGTCCATTTGAAATCTTTAAAGAG 57.220 33.333 21.75 6.90 38.66 2.85
7097 8129 9.295825 TGCTAGTCCATTTGAAATCTTTAAAGA 57.704 29.630 19.83 19.83 39.78 2.52
7098 8130 9.346725 GTGCTAGTCCATTTGAAATCTTTAAAG 57.653 33.333 9.04 9.04 0.00 1.85
7099 8131 8.855110 TGTGCTAGTCCATTTGAAATCTTTAAA 58.145 29.630 0.00 0.00 0.00 1.52
7100 8132 8.402798 TGTGCTAGTCCATTTGAAATCTTTAA 57.597 30.769 0.00 0.00 0.00 1.52
7101 8133 7.994425 TGTGCTAGTCCATTTGAAATCTTTA 57.006 32.000 0.00 0.00 0.00 1.85
7102 8134 6.899393 TGTGCTAGTCCATTTGAAATCTTT 57.101 33.333 0.00 0.00 0.00 2.52
7103 8135 7.611467 TGTATGTGCTAGTCCATTTGAAATCTT 59.389 33.333 2.28 0.00 0.00 2.40
7104 8136 7.112122 TGTATGTGCTAGTCCATTTGAAATCT 58.888 34.615 2.28 0.00 0.00 2.40
7105 8137 7.320443 TGTATGTGCTAGTCCATTTGAAATC 57.680 36.000 2.28 0.00 0.00 2.17
7106 8138 7.701539 TTGTATGTGCTAGTCCATTTGAAAT 57.298 32.000 2.28 0.00 0.00 2.17
7107 8139 7.517614 TTTGTATGTGCTAGTCCATTTGAAA 57.482 32.000 2.28 0.00 0.00 2.69
7108 8140 7.176515 ACATTTGTATGTGCTAGTCCATTTGAA 59.823 33.333 2.28 0.00 43.29 2.69
7109 8141 6.658816 ACATTTGTATGTGCTAGTCCATTTGA 59.341 34.615 2.28 0.00 43.29 2.69
7110 8142 6.855836 ACATTTGTATGTGCTAGTCCATTTG 58.144 36.000 2.28 0.00 43.29 2.32
7111 8143 8.752005 ATACATTTGTATGTGCTAGTCCATTT 57.248 30.769 2.48 0.00 44.56 2.32
7153 8185 5.120830 ACGAGCAAAATGAGTGAATCTACAC 59.879 40.000 0.00 0.00 40.60 2.90
7154 8186 5.120674 CACGAGCAAAATGAGTGAATCTACA 59.879 40.000 0.00 0.00 35.03 2.74
7155 8187 5.120830 ACACGAGCAAAATGAGTGAATCTAC 59.879 40.000 0.69 0.00 36.71 2.59
7156 8188 5.237815 ACACGAGCAAAATGAGTGAATCTA 58.762 37.500 0.69 0.00 36.71 1.98
7157 8189 4.067896 ACACGAGCAAAATGAGTGAATCT 58.932 39.130 0.69 0.00 36.71 2.40
7158 8190 4.410492 ACACGAGCAAAATGAGTGAATC 57.590 40.909 0.69 0.00 36.71 2.52
7159 8191 4.997395 ACTACACGAGCAAAATGAGTGAAT 59.003 37.500 0.69 0.00 36.71 2.57
7160 8192 4.377021 ACTACACGAGCAAAATGAGTGAA 58.623 39.130 0.69 0.00 36.71 3.18
7161 8193 3.987868 GACTACACGAGCAAAATGAGTGA 59.012 43.478 0.69 0.00 36.71 3.41
7162 8194 3.740832 TGACTACACGAGCAAAATGAGTG 59.259 43.478 0.00 0.00 38.63 3.51
7163 8195 3.741344 GTGACTACACGAGCAAAATGAGT 59.259 43.478 0.00 0.00 37.28 3.41
7164 8196 4.313522 GTGACTACACGAGCAAAATGAG 57.686 45.455 0.00 0.00 37.28 2.90
7211 8243 9.303116 TGCAAATACTCCCTCTGTTTTTAAATA 57.697 29.630 0.00 0.00 0.00 1.40
7212 8244 8.189119 TGCAAATACTCCCTCTGTTTTTAAAT 57.811 30.769 0.00 0.00 0.00 1.40
7213 8245 7.589958 TGCAAATACTCCCTCTGTTTTTAAA 57.410 32.000 0.00 0.00 0.00 1.52
7214 8246 7.589958 TTGCAAATACTCCCTCTGTTTTTAA 57.410 32.000 0.00 0.00 0.00 1.52
7215 8247 7.589958 TTTGCAAATACTCCCTCTGTTTTTA 57.410 32.000 8.05 0.00 0.00 1.52
7216 8248 6.478512 TTTGCAAATACTCCCTCTGTTTTT 57.521 33.333 8.05 0.00 0.00 1.94
7217 8249 6.478512 TTTTGCAAATACTCCCTCTGTTTT 57.521 33.333 13.65 0.00 0.00 2.43
7218 8250 6.267471 TCATTTTGCAAATACTCCCTCTGTTT 59.733 34.615 13.65 0.00 0.00 2.83
7219 8251 5.774690 TCATTTTGCAAATACTCCCTCTGTT 59.225 36.000 13.65 0.00 0.00 3.16
7220 8252 5.183904 GTCATTTTGCAAATACTCCCTCTGT 59.816 40.000 13.65 0.00 0.00 3.41
7221 8253 5.183713 TGTCATTTTGCAAATACTCCCTCTG 59.816 40.000 13.65 0.78 0.00 3.35
7222 8254 5.324409 TGTCATTTTGCAAATACTCCCTCT 58.676 37.500 13.65 0.00 0.00 3.69
7223 8255 5.643379 TGTCATTTTGCAAATACTCCCTC 57.357 39.130 13.65 0.10 0.00 4.30
7224 8256 4.082026 GCTGTCATTTTGCAAATACTCCCT 60.082 41.667 13.65 0.00 0.00 4.20
7225 8257 4.176271 GCTGTCATTTTGCAAATACTCCC 58.824 43.478 13.65 0.32 0.00 4.30
7226 8258 3.853671 CGCTGTCATTTTGCAAATACTCC 59.146 43.478 13.65 1.38 0.00 3.85
7227 8259 4.722194 TCGCTGTCATTTTGCAAATACTC 58.278 39.130 13.65 5.48 0.00 2.59
7228 8260 4.764679 TCGCTGTCATTTTGCAAATACT 57.235 36.364 13.65 0.00 0.00 2.12
7229 8261 4.201391 CGTTCGCTGTCATTTTGCAAATAC 60.201 41.667 13.65 12.05 0.00 1.89
7230 8262 3.911365 CGTTCGCTGTCATTTTGCAAATA 59.089 39.130 13.65 4.65 0.00 1.40
7231 8263 2.725723 CGTTCGCTGTCATTTTGCAAAT 59.274 40.909 13.65 0.39 0.00 2.32
7232 8264 2.115595 CGTTCGCTGTCATTTTGCAAA 58.884 42.857 8.05 8.05 0.00 3.68
7233 8265 1.599171 CCGTTCGCTGTCATTTTGCAA 60.599 47.619 0.00 0.00 0.00 4.08
7234 8266 0.040514 CCGTTCGCTGTCATTTTGCA 60.041 50.000 0.00 0.00 0.00 4.08
7235 8267 0.040425 ACCGTTCGCTGTCATTTTGC 60.040 50.000 0.00 0.00 0.00 3.68
7236 8268 2.399396 AACCGTTCGCTGTCATTTTG 57.601 45.000 0.00 0.00 0.00 2.44
7237 8269 2.542824 CCAAACCGTTCGCTGTCATTTT 60.543 45.455 0.00 0.00 0.00 1.82
7238 8270 1.001815 CCAAACCGTTCGCTGTCATTT 60.002 47.619 0.00 0.00 0.00 2.32
7239 8271 0.591170 CCAAACCGTTCGCTGTCATT 59.409 50.000 0.00 0.00 0.00 2.57
7240 8272 1.852067 GCCAAACCGTTCGCTGTCAT 61.852 55.000 0.00 0.00 0.00 3.06
7241 8273 2.539338 GCCAAACCGTTCGCTGTCA 61.539 57.895 0.00 0.00 0.00 3.58
7242 8274 2.251371 GCCAAACCGTTCGCTGTC 59.749 61.111 0.00 0.00 0.00 3.51
7243 8275 3.284449 GGCCAAACCGTTCGCTGT 61.284 61.111 0.00 0.00 0.00 4.40
7252 8284 4.038080 CCAGCGAACGGCCAAACC 62.038 66.667 2.24 0.00 45.17 3.27
7253 8285 4.038080 CCCAGCGAACGGCCAAAC 62.038 66.667 2.24 0.00 45.17 2.93
7259 8291 3.934391 GACTCACCCCAGCGAACGG 62.934 68.421 0.00 0.00 0.00 4.44
7260 8292 2.432628 GACTCACCCCAGCGAACG 60.433 66.667 0.00 0.00 0.00 3.95
7261 8293 2.047179 GGACTCACCCCAGCGAAC 60.047 66.667 0.00 0.00 0.00 3.95
7262 8294 2.203788 AGGACTCACCCCAGCGAA 60.204 61.111 0.00 0.00 40.05 4.70
7263 8295 2.680352 GAGGACTCACCCCAGCGA 60.680 66.667 0.00 0.00 40.05 4.93
7264 8296 4.135153 CGAGGACTCACCCCAGCG 62.135 72.222 0.00 0.00 40.05 5.18
7265 8297 4.459089 GCGAGGACTCACCCCAGC 62.459 72.222 0.00 0.00 40.05 4.85
7266 8298 3.775654 GGCGAGGACTCACCCCAG 61.776 72.222 0.00 0.00 40.05 4.45
7267 8299 4.316823 AGGCGAGGACTCACCCCA 62.317 66.667 2.88 0.00 40.05 4.96
7268 8300 3.462678 GAGGCGAGGACTCACCCC 61.463 72.222 2.88 0.00 37.69 4.95
7269 8301 3.462678 GGAGGCGAGGACTCACCC 61.463 72.222 2.88 0.99 39.95 4.61
7270 8302 3.827898 CGGAGGCGAGGACTCACC 61.828 72.222 0.29 0.00 39.95 4.02
7271 8303 4.500116 GCGGAGGCGAGGACTCAC 62.500 72.222 0.29 0.00 39.95 3.51
7272 8304 2.626255 ATAGCGGAGGCGAGGACTCA 62.626 60.000 0.29 0.00 39.95 3.41
7273 8305 0.605860 TATAGCGGAGGCGAGGACTC 60.606 60.000 0.00 0.00 46.35 3.36
7274 8306 0.178998 TTATAGCGGAGGCGAGGACT 60.179 55.000 0.00 0.00 46.35 3.85
7275 8307 0.672342 TTTATAGCGGAGGCGAGGAC 59.328 55.000 0.00 0.00 46.35 3.85
7276 8308 1.405872 TTTTATAGCGGAGGCGAGGA 58.594 50.000 0.00 0.00 46.35 3.71
7277 8309 1.865340 GTTTTTATAGCGGAGGCGAGG 59.135 52.381 0.00 0.00 46.35 4.63
7278 8310 2.546778 TGTTTTTATAGCGGAGGCGAG 58.453 47.619 0.00 0.00 46.35 5.03
7279 8311 2.676632 TGTTTTTATAGCGGAGGCGA 57.323 45.000 0.00 0.00 46.35 5.54
7280 8312 3.131396 AGATGTTTTTATAGCGGAGGCG 58.869 45.455 0.00 0.00 46.35 5.52
7281 8313 4.127171 TGAGATGTTTTTATAGCGGAGGC 58.873 43.478 0.00 0.00 40.37 4.70
7282 8314 6.677781 TTTGAGATGTTTTTATAGCGGAGG 57.322 37.500 0.00 0.00 0.00 4.30
7339 8371 4.901197 AGGTTGTGGTGGTTTTCTTTTT 57.099 36.364 0.00 0.00 0.00 1.94
7340 8372 5.020795 AGTAGGTTGTGGTGGTTTTCTTTT 58.979 37.500 0.00 0.00 0.00 2.27
7341 8373 4.606210 AGTAGGTTGTGGTGGTTTTCTTT 58.394 39.130 0.00 0.00 0.00 2.52
7342 8374 4.245251 AGTAGGTTGTGGTGGTTTTCTT 57.755 40.909 0.00 0.00 0.00 2.52
7343 8375 3.945640 AGTAGGTTGTGGTGGTTTTCT 57.054 42.857 0.00 0.00 0.00 2.52
7344 8376 3.501062 GCTAGTAGGTTGTGGTGGTTTTC 59.499 47.826 0.00 0.00 0.00 2.29
7345 8377 3.483421 GCTAGTAGGTTGTGGTGGTTTT 58.517 45.455 0.00 0.00 0.00 2.43
7346 8378 2.549349 CGCTAGTAGGTTGTGGTGGTTT 60.549 50.000 0.00 0.00 0.00 3.27
7347 8379 1.001633 CGCTAGTAGGTTGTGGTGGTT 59.998 52.381 0.00 0.00 0.00 3.67
7348 8380 0.606604 CGCTAGTAGGTTGTGGTGGT 59.393 55.000 0.00 0.00 0.00 4.16
7349 8381 0.892755 TCGCTAGTAGGTTGTGGTGG 59.107 55.000 0.00 0.00 0.00 4.61
7350 8382 1.544691 ACTCGCTAGTAGGTTGTGGTG 59.455 52.381 0.00 0.00 32.84 4.17
7351 8383 1.544691 CACTCGCTAGTAGGTTGTGGT 59.455 52.381 0.00 0.00 33.48 4.16
7352 8384 1.736032 GCACTCGCTAGTAGGTTGTGG 60.736 57.143 0.00 0.00 33.48 4.17
7353 8385 1.630148 GCACTCGCTAGTAGGTTGTG 58.370 55.000 0.00 5.22 33.48 3.33
7354 8386 0.531200 GGCACTCGCTAGTAGGTTGT 59.469 55.000 0.00 0.00 38.60 3.32
7355 8387 0.530744 TGGCACTCGCTAGTAGGTTG 59.469 55.000 0.00 0.00 38.60 3.77
7356 8388 0.531200 GTGGCACTCGCTAGTAGGTT 59.469 55.000 11.13 0.00 38.60 3.50
7357 8389 0.323542 AGTGGCACTCGCTAGTAGGT 60.324 55.000 15.88 0.00 38.60 3.08
7358 8390 0.818296 AAGTGGCACTCGCTAGTAGG 59.182 55.000 22.31 0.00 38.60 3.18
7359 8391 2.263077 CAAAGTGGCACTCGCTAGTAG 58.737 52.381 22.31 1.23 38.60 2.57
7360 8392 1.671850 GCAAAGTGGCACTCGCTAGTA 60.672 52.381 26.14 0.00 38.60 1.82
7361 8393 0.951040 GCAAAGTGGCACTCGCTAGT 60.951 55.000 26.14 7.93 38.60 2.57
7362 8394 0.950555 TGCAAAGTGGCACTCGCTAG 60.951 55.000 30.33 17.30 39.25 3.42
7363 8395 1.070615 TGCAAAGTGGCACTCGCTA 59.929 52.632 30.33 19.55 39.25 4.26
7364 8396 2.203195 TGCAAAGTGGCACTCGCT 60.203 55.556 30.33 12.89 39.25 4.93
7371 8403 1.892474 TGAAGGGTTATGCAAAGTGGC 59.108 47.619 0.00 0.00 0.00 5.01
7372 8404 4.806640 AATGAAGGGTTATGCAAAGTGG 57.193 40.909 0.00 0.00 0.00 4.00
7373 8405 8.600449 TTTTAAATGAAGGGTTATGCAAAGTG 57.400 30.769 0.00 0.00 0.00 3.16
7408 8440 4.225267 TCTTTTTAGATGGAGGTGAGGACC 59.775 45.833 0.00 0.00 43.52 4.46
7409 8441 5.422214 TCTTTTTAGATGGAGGTGAGGAC 57.578 43.478 0.00 0.00 0.00 3.85
7410 8442 6.448369 TTTCTTTTTAGATGGAGGTGAGGA 57.552 37.500 0.00 0.00 0.00 3.71
7411 8443 7.524717 TTTTTCTTTTTAGATGGAGGTGAGG 57.475 36.000 0.00 0.00 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.