Multiple sequence alignment - TraesCS1B01G444300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G444300 chr1B 100.000 2109 0 0 1 2109 665030808 665032916 0.000000e+00 3895.0
1 TraesCS1B01G444300 chr1B 87.836 1003 63 23 816 1790 665028199 665027228 0.000000e+00 1122.0
2 TraesCS1B01G444300 chr1B 100.000 592 0 0 2403 2994 665033210 665033801 0.000000e+00 1094.0
3 TraesCS1B01G444300 chr1B 82.051 780 70 27 1 757 665028994 665028262 4.270000e-168 601.0
4 TraesCS1B01G444300 chr1B 83.916 429 39 12 23 434 665030091 665029676 1.680000e-102 383.0
5 TraesCS1B01G444300 chr1B 90.441 136 11 2 1803 1936 53474608 53474743 8.530000e-41 178.0
6 TraesCS1B01G444300 chr1B 90.370 135 11 2 1804 1936 667056441 667056307 3.070000e-40 176.0
7 TraesCS1B01G444300 chr1D 93.617 987 44 13 816 1790 477427664 477428643 0.000000e+00 1456.0
8 TraesCS1B01G444300 chr1D 88.989 999 70 20 816 1790 477416864 477415882 0.000000e+00 1199.0
9 TraesCS1B01G444300 chr1D 83.105 657 53 23 1 644 477426939 477427550 2.030000e-151 545.0
10 TraesCS1B01G444300 chr1D 84.278 388 32 8 46 417 477417703 477417329 4.750000e-93 351.0
11 TraesCS1B01G444300 chr1D 80.968 310 39 11 440 748 477417217 477416927 8.350000e-56 228.0
12 TraesCS1B01G444300 chr1D 87.709 179 12 3 1630 1802 477425045 477425219 1.820000e-47 200.0
13 TraesCS1B01G444300 chr1A 91.768 984 55 12 816 1790 573695718 573694752 0.000000e+00 1345.0
14 TraesCS1B01G444300 chr1A 86.114 965 78 20 866 1807 573713400 573714331 0.000000e+00 989.0
15 TraesCS1B01G444300 chr1A 82.194 775 78 23 9 757 573712544 573713284 1.970000e-171 612.0
16 TraesCS1B01G444300 chr1A 83.059 425 35 13 36 434 573696515 573696102 4.750000e-93 351.0
17 TraesCS1B01G444300 chr1A 87.302 126 16 0 1805 1930 586372725 586372850 8.650000e-31 145.0
18 TraesCS1B01G444300 chr1A 94.872 39 2 0 777 815 573695790 573695752 8.960000e-06 62.1
19 TraesCS1B01G444300 chr2A 91.912 136 9 2 1803 1936 28467626 28467761 3.940000e-44 189.0
20 TraesCS1B01G444300 chr4B 91.176 136 8 4 1804 1936 172375283 172375417 6.590000e-42 182.0
21 TraesCS1B01G444300 chr3B 77.812 329 45 16 1354 1656 140394208 140393882 8.530000e-41 178.0
22 TraesCS1B01G444300 chr3B 83.000 200 13 5 1807 1985 49631390 49631191 8.590000e-36 161.0
23 TraesCS1B01G444300 chr3B 82.353 204 15 4 1805 1987 342023183 342022980 1.110000e-34 158.0
24 TraesCS1B01G444300 chr3B 78.142 183 26 9 1807 1985 49520972 49520800 1.470000e-18 104.0
25 TraesCS1B01G444300 chr7D 90.370 135 11 2 1804 1936 564063182 564063316 3.070000e-40 176.0
26 TraesCS1B01G444300 chr2D 90.370 135 11 2 1804 1936 83158708 83158842 3.070000e-40 176.0
27 TraesCS1B01G444300 chr2B 90.909 132 10 2 1807 1936 92602927 92602796 3.070000e-40 176.0
28 TraesCS1B01G444300 chr2B 88.976 127 14 0 1804 1930 65096269 65096395 1.110000e-34 158.0
29 TraesCS1B01G444300 chr6B 84.530 181 19 8 1805 1981 416379 416554 1.430000e-38 171.0
30 TraesCS1B01G444300 chr4D 83.696 184 26 4 1804 1984 316197325 316197143 1.430000e-38 171.0
31 TraesCS1B01G444300 chr3A 77.410 332 43 24 1361 1664 107044667 107044340 5.130000e-38 169.0
32 TraesCS1B01G444300 chr5B 88.971 136 14 1 1796 1930 15669221 15669086 1.850000e-37 167.0
33 TraesCS1B01G444300 chr3D 90.909 110 7 1 1547 1656 90775332 90775226 8.650000e-31 145.0
34 TraesCS1B01G444300 chr6A 85.714 126 18 0 1805 1930 570985728 570985603 1.870000e-27 134.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G444300 chr1B 665030808 665033801 2993 False 2494.500000 3895 100.000000 1 2994 2 chr1B.!!$F2 2993
1 TraesCS1B01G444300 chr1B 665027228 665030091 2863 True 702.000000 1122 84.601000 1 1790 3 chr1B.!!$R2 1789
2 TraesCS1B01G444300 chr1D 477425045 477428643 3598 False 733.666667 1456 88.143667 1 1802 3 chr1D.!!$F1 1801
3 TraesCS1B01G444300 chr1D 477415882 477417703 1821 True 592.666667 1199 84.745000 46 1790 3 chr1D.!!$R1 1744
4 TraesCS1B01G444300 chr1A 573712544 573714331 1787 False 800.500000 989 84.154000 9 1807 2 chr1A.!!$F2 1798
5 TraesCS1B01G444300 chr1A 573694752 573696515 1763 True 586.033333 1345 89.899667 36 1790 3 chr1A.!!$R1 1754

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
34 1929 0.034896 GGGCGAACAGAGGAAAGACA 59.965 55.0 0.0 0.0 0.0 3.41 F
68 1963 0.110486 TTGGTGAAGCTTGGAGGGAC 59.890 55.0 2.1 0.0 0.0 4.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1392 4540 0.363512 CGTTGAGCATCTCGAACACG 59.636 55.0 0.00 0.0 35.87 4.49 R
2054 5218 0.108138 CATCCTGACTGTCCCCGAAC 60.108 60.0 5.17 0.0 0.00 3.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 1923 2.683933 GGAGGGGCGAACAGAGGA 60.684 66.667 0.00 0.00 0.00 3.71
34 1929 0.034896 GGGCGAACAGAGGAAAGACA 59.965 55.000 0.00 0.00 0.00 3.41
68 1963 0.110486 TTGGTGAAGCTTGGAGGGAC 59.890 55.000 2.10 0.00 0.00 4.46
82 1977 1.183676 AGGGACGAGTTTGCCGTAGT 61.184 55.000 0.00 0.00 40.67 2.73
83 1978 0.320160 GGGACGAGTTTGCCGTAGTT 60.320 55.000 0.00 0.00 40.67 2.24
89 1984 2.478894 CGAGTTTGCCGTAGTTGTCAAT 59.521 45.455 0.00 0.00 0.00 2.57
129 2024 9.974980 CAACCTAATCTCTACTTCTCCTAAATC 57.025 37.037 0.00 0.00 0.00 2.17
338 2252 3.539338 GCCCTGGCCTATCCAAATT 57.461 52.632 3.32 0.00 46.01 1.82
339 2253 2.675658 GCCCTGGCCTATCCAAATTA 57.324 50.000 3.32 0.00 46.01 1.40
340 2254 2.957474 GCCCTGGCCTATCCAAATTAA 58.043 47.619 3.32 0.00 46.01 1.40
341 2255 3.304829 GCCCTGGCCTATCCAAATTAAA 58.695 45.455 3.32 0.00 46.01 1.52
348 2262 5.536161 TGGCCTATCCAAATTAAAGCAGATC 59.464 40.000 3.32 0.00 43.21 2.75
459 2641 5.298276 TGGTTGTTAGTTGGATGAAACTGTC 59.702 40.000 0.00 0.00 40.58 3.51
526 2709 1.823169 GAACGCACACTCACCCCCTA 61.823 60.000 0.00 0.00 0.00 3.53
527 2710 2.108278 AACGCACACTCACCCCCTAC 62.108 60.000 0.00 0.00 0.00 3.18
528 2711 2.669240 GCACACTCACCCCCTACC 59.331 66.667 0.00 0.00 0.00 3.18
529 2712 2.978824 CACACTCACCCCCTACCG 59.021 66.667 0.00 0.00 0.00 4.02
531 2714 1.156803 ACACTCACCCCCTACCGAA 59.843 57.895 0.00 0.00 0.00 4.30
532 2715 0.252558 ACACTCACCCCCTACCGAAT 60.253 55.000 0.00 0.00 0.00 3.34
534 2717 1.411612 CACTCACCCCCTACCGAATAC 59.588 57.143 0.00 0.00 0.00 1.89
535 2718 1.046204 CTCACCCCCTACCGAATACC 58.954 60.000 0.00 0.00 0.00 2.73
536 2719 0.756442 TCACCCCCTACCGAATACCG 60.756 60.000 0.00 0.00 38.18 4.02
578 3622 0.661552 ATGCGCATGTCTCATCTTGC 59.338 50.000 24.69 0.00 35.89 4.01
599 3644 5.581605 TGCTTAAAGTTGAACTCAGCAAAG 58.418 37.500 18.78 10.63 34.64 2.77
604 3649 2.609459 AGTTGAACTCAGCAAAGTGTCG 59.391 45.455 0.00 0.00 0.00 4.35
673 3726 2.833533 GCACCAACAGCACGAGCAA 61.834 57.895 7.77 0.00 45.49 3.91
753 3808 7.558161 TGTTCAGAACATCAACATCCATATC 57.442 36.000 12.24 0.00 36.25 1.63
754 3809 6.543465 TGTTCAGAACATCAACATCCATATCC 59.457 38.462 12.24 0.00 36.25 2.59
755 3810 6.251255 TCAGAACATCAACATCCATATCCA 57.749 37.500 0.00 0.00 0.00 3.41
756 3811 6.844829 TCAGAACATCAACATCCATATCCAT 58.155 36.000 0.00 0.00 0.00 3.41
757 3812 7.292319 TCAGAACATCAACATCCATATCCATT 58.708 34.615 0.00 0.00 0.00 3.16
758 3813 7.446319 TCAGAACATCAACATCCATATCCATTC 59.554 37.037 0.00 0.00 0.00 2.67
759 3814 7.447545 CAGAACATCAACATCCATATCCATTCT 59.552 37.037 0.00 0.00 0.00 2.40
760 3815 8.663167 AGAACATCAACATCCATATCCATTCTA 58.337 33.333 0.00 0.00 0.00 2.10
761 3816 9.458727 GAACATCAACATCCATATCCATTCTAT 57.541 33.333 0.00 0.00 0.00 1.98
762 3817 9.818270 AACATCAACATCCATATCCATTCTATT 57.182 29.630 0.00 0.00 0.00 1.73
763 3818 9.458727 ACATCAACATCCATATCCATTCTATTC 57.541 33.333 0.00 0.00 0.00 1.75
764 3819 8.610035 CATCAACATCCATATCCATTCTATTCG 58.390 37.037 0.00 0.00 0.00 3.34
765 3820 7.105588 TCAACATCCATATCCATTCTATTCGG 58.894 38.462 0.00 0.00 0.00 4.30
766 3821 5.994250 ACATCCATATCCATTCTATTCGGG 58.006 41.667 0.00 0.00 0.00 5.14
767 3822 5.726308 ACATCCATATCCATTCTATTCGGGA 59.274 40.000 0.00 0.00 0.00 5.14
768 3823 6.215431 ACATCCATATCCATTCTATTCGGGAA 59.785 38.462 0.00 0.00 32.25 3.97
769 3824 6.696042 TCCATATCCATTCTATTCGGGAAA 57.304 37.500 0.00 0.00 32.25 3.13
770 3825 7.085476 TCCATATCCATTCTATTCGGGAAAA 57.915 36.000 0.00 0.00 32.25 2.29
771 3826 7.522542 TCCATATCCATTCTATTCGGGAAAAA 58.477 34.615 0.00 0.00 32.25 1.94
812 3867 0.324738 TGAAAACCTGGGGTTGCACA 60.325 50.000 2.53 2.01 46.20 4.57
922 4033 0.460284 CATCCCTCGTTTCAGACCCG 60.460 60.000 0.00 0.00 0.00 5.28
950 4061 1.641677 GCCACGACACACAAGACAC 59.358 57.895 0.00 0.00 0.00 3.67
973 4096 1.486726 CCCTCGCTCCTTCAAATACCT 59.513 52.381 0.00 0.00 0.00 3.08
974 4097 2.555199 CCTCGCTCCTTCAAATACCTG 58.445 52.381 0.00 0.00 0.00 4.00
975 4098 2.168521 CCTCGCTCCTTCAAATACCTGA 59.831 50.000 0.00 0.00 0.00 3.86
976 4099 3.190874 CTCGCTCCTTCAAATACCTGAC 58.809 50.000 0.00 0.00 0.00 3.51
977 4100 2.565391 TCGCTCCTTCAAATACCTGACA 59.435 45.455 0.00 0.00 0.00 3.58
1008 4146 1.022735 TCCTATCGACCAAGAGCGAC 58.977 55.000 0.00 0.00 39.56 5.19
1042 4180 6.830324 ACAGTATCGTTAGTACCTATCCAACA 59.170 38.462 0.00 0.00 0.00 3.33
1079 4217 2.750815 GCGAGTGACACCGCTTATT 58.249 52.632 24.81 0.00 46.96 1.40
1289 4437 2.280524 CGTCAACTTCCACCGCCA 60.281 61.111 0.00 0.00 0.00 5.69
1316 4464 1.437160 CTTGCTCTCGCTCCTCCTC 59.563 63.158 0.00 0.00 36.97 3.71
1317 4465 1.000270 TTGCTCTCGCTCCTCCTCT 60.000 57.895 0.00 0.00 36.97 3.69
1318 4466 1.318886 TTGCTCTCGCTCCTCCTCTG 61.319 60.000 0.00 0.00 36.97 3.35
1363 4511 1.203065 CGAAACCGTCGGCTATTACC 58.797 55.000 12.28 0.00 46.45 2.85
1412 4560 0.716108 GTGTTCGAGATGCTCAACGG 59.284 55.000 0.00 0.00 30.25 4.44
1418 4566 2.815211 GATGCTCAACGGCAGCGA 60.815 61.111 0.00 0.00 45.75 4.93
1767 4925 3.149196 ACGTTGCCATGTCTTCATCTTT 58.851 40.909 0.00 0.00 31.15 2.52
1793 4957 8.230472 AGAAAACATAAATCATCCACATCCTC 57.770 34.615 0.00 0.00 0.00 3.71
1795 4959 7.814264 AAACATAAATCATCCACATCCTCTC 57.186 36.000 0.00 0.00 0.00 3.20
1798 4962 7.675062 ACATAAATCATCCACATCCTCTCTAC 58.325 38.462 0.00 0.00 0.00 2.59
1807 4971 4.035792 CCACATCCTCTCTACACGACTAAG 59.964 50.000 0.00 0.00 0.00 2.18
1808 4972 4.035792 CACATCCTCTCTACACGACTAAGG 59.964 50.000 0.00 0.00 0.00 2.69
1809 4973 2.641305 TCCTCTCTACACGACTAAGGC 58.359 52.381 0.00 0.00 0.00 4.35
1810 4974 1.677052 CCTCTCTACACGACTAAGGCC 59.323 57.143 0.00 0.00 0.00 5.19
1811 4975 2.645802 CTCTCTACACGACTAAGGCCT 58.354 52.381 0.00 0.00 0.00 5.19
1812 4976 3.018149 CTCTCTACACGACTAAGGCCTT 58.982 50.000 24.18 24.18 0.00 4.35
1813 4977 2.753452 TCTCTACACGACTAAGGCCTTG 59.247 50.000 28.77 19.17 0.00 3.61
1814 4978 2.492484 CTCTACACGACTAAGGCCTTGT 59.508 50.000 28.77 22.17 0.00 3.16
1815 4979 3.689347 TCTACACGACTAAGGCCTTGTA 58.311 45.455 28.77 18.96 0.00 2.41
1816 4980 2.738013 ACACGACTAAGGCCTTGTAC 57.262 50.000 28.77 16.36 0.00 2.90
1817 4981 1.965643 ACACGACTAAGGCCTTGTACA 59.034 47.619 28.77 6.91 0.00 2.90
1818 4982 2.366266 ACACGACTAAGGCCTTGTACAA 59.634 45.455 28.77 8.28 0.00 2.41
1819 4983 3.007614 ACACGACTAAGGCCTTGTACAAT 59.992 43.478 28.77 6.21 0.00 2.71
1820 4984 3.370978 CACGACTAAGGCCTTGTACAATG 59.629 47.826 28.77 14.55 0.00 2.82
1821 4985 3.259876 ACGACTAAGGCCTTGTACAATGA 59.740 43.478 28.77 4.02 0.00 2.57
1822 4986 4.081087 ACGACTAAGGCCTTGTACAATGAT 60.081 41.667 28.77 0.00 0.00 2.45
1823 4987 5.128171 ACGACTAAGGCCTTGTACAATGATA 59.872 40.000 28.77 2.40 0.00 2.15
1824 4988 5.692204 CGACTAAGGCCTTGTACAATGATAG 59.308 44.000 28.77 15.03 0.00 2.08
1825 4989 6.461092 CGACTAAGGCCTTGTACAATGATAGA 60.461 42.308 28.77 1.61 0.00 1.98
1826 4990 7.195374 ACTAAGGCCTTGTACAATGATAGAA 57.805 36.000 28.77 1.12 0.00 2.10
1827 4991 7.275920 ACTAAGGCCTTGTACAATGATAGAAG 58.724 38.462 28.77 13.86 0.00 2.85
1828 4992 5.957771 AGGCCTTGTACAATGATAGAAGA 57.042 39.130 14.26 0.00 29.03 2.87
1829 4993 6.506538 AGGCCTTGTACAATGATAGAAGAT 57.493 37.500 14.26 0.00 29.03 2.40
1830 4994 6.904626 AGGCCTTGTACAATGATAGAAGATT 58.095 36.000 14.26 0.00 29.03 2.40
1831 4995 8.034313 AGGCCTTGTACAATGATAGAAGATTA 57.966 34.615 14.26 0.00 29.03 1.75
1832 4996 8.153550 AGGCCTTGTACAATGATAGAAGATTAG 58.846 37.037 14.26 0.00 29.03 1.73
1833 4997 7.389053 GGCCTTGTACAATGATAGAAGATTAGG 59.611 40.741 14.26 5.70 29.03 2.69
1834 4998 7.389053 GCCTTGTACAATGATAGAAGATTAGGG 59.611 40.741 14.26 5.26 29.03 3.53
1835 4999 8.651389 CCTTGTACAATGATAGAAGATTAGGGA 58.349 37.037 9.13 0.00 29.03 4.20
1838 5002 8.651389 TGTACAATGATAGAAGATTAGGGAAGG 58.349 37.037 0.00 0.00 0.00 3.46
1839 5003 7.698163 ACAATGATAGAAGATTAGGGAAGGT 57.302 36.000 0.00 0.00 0.00 3.50
1840 5004 7.512992 ACAATGATAGAAGATTAGGGAAGGTG 58.487 38.462 0.00 0.00 0.00 4.00
1841 5005 7.127955 ACAATGATAGAAGATTAGGGAAGGTGT 59.872 37.037 0.00 0.00 0.00 4.16
1842 5006 7.698163 ATGATAGAAGATTAGGGAAGGTGTT 57.302 36.000 0.00 0.00 0.00 3.32
1843 5007 7.510675 TGATAGAAGATTAGGGAAGGTGTTT 57.489 36.000 0.00 0.00 0.00 2.83
1844 5008 8.618240 TGATAGAAGATTAGGGAAGGTGTTTA 57.382 34.615 0.00 0.00 0.00 2.01
1845 5009 8.705594 TGATAGAAGATTAGGGAAGGTGTTTAG 58.294 37.037 0.00 0.00 0.00 1.85
1846 5010 8.855804 ATAGAAGATTAGGGAAGGTGTTTAGA 57.144 34.615 0.00 0.00 0.00 2.10
1847 5011 7.189079 AGAAGATTAGGGAAGGTGTTTAGAG 57.811 40.000 0.00 0.00 0.00 2.43
1848 5012 6.960542 AGAAGATTAGGGAAGGTGTTTAGAGA 59.039 38.462 0.00 0.00 0.00 3.10
1849 5013 7.458170 AGAAGATTAGGGAAGGTGTTTAGAGAA 59.542 37.037 0.00 0.00 0.00 2.87
1850 5014 7.569599 AGATTAGGGAAGGTGTTTAGAGAAA 57.430 36.000 0.00 0.00 0.00 2.52
1851 5015 8.164057 AGATTAGGGAAGGTGTTTAGAGAAAT 57.836 34.615 0.00 0.00 0.00 2.17
1852 5016 9.280456 AGATTAGGGAAGGTGTTTAGAGAAATA 57.720 33.333 0.00 0.00 0.00 1.40
1853 5017 9.901172 GATTAGGGAAGGTGTTTAGAGAAATAA 57.099 33.333 0.00 0.00 0.00 1.40
1855 5019 7.997773 AGGGAAGGTGTTTAGAGAAATAAAC 57.002 36.000 3.07 3.07 43.10 2.01
1856 5020 6.946583 AGGGAAGGTGTTTAGAGAAATAAACC 59.053 38.462 6.84 0.00 42.45 3.27
1857 5021 6.717997 GGGAAGGTGTTTAGAGAAATAAACCA 59.282 38.462 6.84 0.00 42.45 3.67
1858 5022 7.094334 GGGAAGGTGTTTAGAGAAATAAACCAG 60.094 40.741 6.84 0.00 42.45 4.00
1859 5023 7.664318 GGAAGGTGTTTAGAGAAATAAACCAGA 59.336 37.037 6.84 0.00 42.45 3.86
1860 5024 9.232473 GAAGGTGTTTAGAGAAATAAACCAGAT 57.768 33.333 6.84 0.00 42.45 2.90
1861 5025 9.588096 AAGGTGTTTAGAGAAATAAACCAGATT 57.412 29.630 6.84 0.00 42.45 2.40
1862 5026 9.588096 AGGTGTTTAGAGAAATAAACCAGATTT 57.412 29.630 6.84 0.00 42.45 2.17
1877 5041 8.631480 AAACCAGATTTTTCTTAAGTATCGGT 57.369 30.769 1.63 9.86 0.00 4.69
1878 5042 7.611213 ACCAGATTTTTCTTAAGTATCGGTG 57.389 36.000 1.63 0.00 0.00 4.94
1879 5043 6.093633 ACCAGATTTTTCTTAAGTATCGGTGC 59.906 38.462 1.63 0.00 0.00 5.01
1880 5044 6.316390 CCAGATTTTTCTTAAGTATCGGTGCT 59.684 38.462 1.63 0.00 0.00 4.40
1881 5045 7.148239 CCAGATTTTTCTTAAGTATCGGTGCTT 60.148 37.037 3.98 3.98 34.50 3.91
1882 5046 8.879759 CAGATTTTTCTTAAGTATCGGTGCTTA 58.120 33.333 1.71 1.71 32.30 3.09
1883 5047 9.614792 AGATTTTTCTTAAGTATCGGTGCTTAT 57.385 29.630 7.08 0.00 33.43 1.73
1886 5050 9.834628 TTTTTCTTAAGTATCGGTGCTTATTTG 57.165 29.630 7.08 2.02 33.43 2.32
1887 5051 8.556213 TTTCTTAAGTATCGGTGCTTATTTGT 57.444 30.769 7.08 0.00 33.43 2.83
1888 5052 9.656040 TTTCTTAAGTATCGGTGCTTATTTGTA 57.344 29.630 7.08 0.00 33.43 2.41
1889 5053 8.638685 TCTTAAGTATCGGTGCTTATTTGTAC 57.361 34.615 7.08 0.00 33.43 2.90
1890 5054 8.252417 TCTTAAGTATCGGTGCTTATTTGTACA 58.748 33.333 7.08 0.00 33.43 2.90
1891 5055 6.903883 AAGTATCGGTGCTTATTTGTACAG 57.096 37.500 0.00 0.00 0.00 2.74
1892 5056 5.357257 AGTATCGGTGCTTATTTGTACAGG 58.643 41.667 0.00 0.00 0.00 4.00
1893 5057 3.965379 TCGGTGCTTATTTGTACAGGA 57.035 42.857 0.00 0.00 0.00 3.86
1894 5058 4.481368 TCGGTGCTTATTTGTACAGGAT 57.519 40.909 0.00 0.00 0.00 3.24
1895 5059 5.601583 TCGGTGCTTATTTGTACAGGATA 57.398 39.130 0.00 0.00 0.00 2.59
1896 5060 5.597806 TCGGTGCTTATTTGTACAGGATAG 58.402 41.667 0.00 0.00 0.00 2.08
1897 5061 5.361571 TCGGTGCTTATTTGTACAGGATAGA 59.638 40.000 0.00 0.00 0.00 1.98
1898 5062 5.462398 CGGTGCTTATTTGTACAGGATAGAC 59.538 44.000 0.00 0.00 0.00 2.59
1899 5063 5.462398 GGTGCTTATTTGTACAGGATAGACG 59.538 44.000 0.00 0.00 0.00 4.18
1900 5064 5.047847 TGCTTATTTGTACAGGATAGACGC 58.952 41.667 0.00 4.64 0.00 5.19
1901 5065 5.163447 TGCTTATTTGTACAGGATAGACGCT 60.163 40.000 0.00 0.00 0.00 5.07
1902 5066 5.753921 GCTTATTTGTACAGGATAGACGCTT 59.246 40.000 0.00 0.00 0.00 4.68
1903 5067 6.921857 GCTTATTTGTACAGGATAGACGCTTA 59.078 38.462 0.00 0.00 0.00 3.09
1904 5068 7.437267 GCTTATTTGTACAGGATAGACGCTTAA 59.563 37.037 0.00 0.00 0.00 1.85
1905 5069 8.638685 TTATTTGTACAGGATAGACGCTTAAC 57.361 34.615 0.00 0.00 0.00 2.01
1906 5070 5.909621 TTGTACAGGATAGACGCTTAACT 57.090 39.130 0.00 0.00 0.00 2.24
1907 5071 7.395190 TTTGTACAGGATAGACGCTTAACTA 57.605 36.000 0.00 0.00 0.00 2.24
1908 5072 7.395190 TTGTACAGGATAGACGCTTAACTAA 57.605 36.000 0.00 0.00 0.00 2.24
1909 5073 7.024340 TGTACAGGATAGACGCTTAACTAAG 57.976 40.000 0.00 0.00 36.40 2.18
1921 5085 4.705337 CTTAACTAAGCGTCTCTCCTGT 57.295 45.455 0.00 0.00 0.00 4.00
1922 5086 5.814764 CTTAACTAAGCGTCTCTCCTGTA 57.185 43.478 0.00 0.00 0.00 2.74
1923 5087 5.812652 CTTAACTAAGCGTCTCTCCTGTAG 58.187 45.833 0.00 0.00 0.00 2.74
1924 5088 3.630892 ACTAAGCGTCTCTCCTGTAGA 57.369 47.619 0.00 0.00 0.00 2.59
1925 5089 3.952931 ACTAAGCGTCTCTCCTGTAGAA 58.047 45.455 0.00 0.00 32.46 2.10
1926 5090 4.333690 ACTAAGCGTCTCTCCTGTAGAAA 58.666 43.478 0.00 0.00 32.46 2.52
1927 5091 4.951094 ACTAAGCGTCTCTCCTGTAGAAAT 59.049 41.667 0.00 0.00 32.46 2.17
1928 5092 6.120905 ACTAAGCGTCTCTCCTGTAGAAATA 58.879 40.000 0.00 0.00 32.46 1.40
1929 5093 5.508200 AAGCGTCTCTCCTGTAGAAATAG 57.492 43.478 0.00 0.00 32.46 1.73
1930 5094 3.316868 AGCGTCTCTCCTGTAGAAATAGC 59.683 47.826 0.00 0.00 32.46 2.97
1931 5095 3.551250 GCGTCTCTCCTGTAGAAATAGCC 60.551 52.174 0.00 0.00 32.46 3.93
1932 5096 3.004944 CGTCTCTCCTGTAGAAATAGCCC 59.995 52.174 0.00 0.00 32.46 5.19
1933 5097 3.004944 GTCTCTCCTGTAGAAATAGCCCG 59.995 52.174 0.00 0.00 32.46 6.13
1934 5098 2.297597 CTCTCCTGTAGAAATAGCCCGG 59.702 54.545 0.00 0.00 32.46 5.73
1935 5099 2.040178 CTCCTGTAGAAATAGCCCGGT 58.960 52.381 0.00 0.00 0.00 5.28
1936 5100 2.434702 CTCCTGTAGAAATAGCCCGGTT 59.565 50.000 0.00 0.00 0.00 4.44
1937 5101 2.841881 TCCTGTAGAAATAGCCCGGTTT 59.158 45.455 0.00 0.00 0.00 3.27
1938 5102 4.032310 TCCTGTAGAAATAGCCCGGTTTA 58.968 43.478 0.00 0.00 0.00 2.01
1939 5103 4.657039 TCCTGTAGAAATAGCCCGGTTTAT 59.343 41.667 0.00 0.00 0.00 1.40
1940 5104 5.131475 TCCTGTAGAAATAGCCCGGTTTATT 59.869 40.000 0.00 1.01 0.00 1.40
1941 5105 5.826208 CCTGTAGAAATAGCCCGGTTTATTT 59.174 40.000 16.13 16.13 33.43 1.40
1942 5106 6.320418 CCTGTAGAAATAGCCCGGTTTATTTT 59.680 38.462 16.86 11.51 31.50 1.82
1943 5107 7.147966 CCTGTAGAAATAGCCCGGTTTATTTTT 60.148 37.037 16.86 14.60 31.50 1.94
1944 5108 7.764331 TGTAGAAATAGCCCGGTTTATTTTTC 58.236 34.615 16.86 10.88 31.50 2.29
1945 5109 7.612633 TGTAGAAATAGCCCGGTTTATTTTTCT 59.387 33.333 16.86 15.68 36.47 2.52
1946 5110 9.112725 GTAGAAATAGCCCGGTTTATTTTTCTA 57.887 33.333 16.86 14.96 34.84 2.10
1947 5111 8.584063 AGAAATAGCCCGGTTTATTTTTCTAA 57.416 30.769 16.86 0.00 32.16 2.10
1948 5112 8.683615 AGAAATAGCCCGGTTTATTTTTCTAAG 58.316 33.333 16.86 0.00 32.16 2.18
1949 5113 4.713824 AGCCCGGTTTATTTTTCTAAGC 57.286 40.909 0.00 0.00 0.00 3.09
1950 5114 4.083565 AGCCCGGTTTATTTTTCTAAGCA 58.916 39.130 0.00 0.00 0.00 3.91
1951 5115 4.709886 AGCCCGGTTTATTTTTCTAAGCAT 59.290 37.500 0.00 0.00 0.00 3.79
1952 5116 5.186992 AGCCCGGTTTATTTTTCTAAGCATT 59.813 36.000 0.00 0.00 0.00 3.56
1953 5117 5.518847 GCCCGGTTTATTTTTCTAAGCATTC 59.481 40.000 0.00 0.00 0.00 2.67
1954 5118 6.627287 GCCCGGTTTATTTTTCTAAGCATTCT 60.627 38.462 0.00 0.00 0.00 2.40
1955 5119 6.972901 CCCGGTTTATTTTTCTAAGCATTCTC 59.027 38.462 0.00 0.00 0.00 2.87
1956 5120 7.148069 CCCGGTTTATTTTTCTAAGCATTCTCT 60.148 37.037 0.00 0.00 0.00 3.10
1957 5121 8.889717 CCGGTTTATTTTTCTAAGCATTCTCTA 58.110 33.333 0.00 0.00 0.00 2.43
1964 5128 8.798859 TTTTTCTAAGCATTCTCTAAGCATCT 57.201 30.769 0.00 0.00 0.00 2.90
1965 5129 8.430801 TTTTCTAAGCATTCTCTAAGCATCTC 57.569 34.615 0.00 0.00 0.00 2.75
1966 5130 6.095432 TCTAAGCATTCTCTAAGCATCTCC 57.905 41.667 0.00 0.00 0.00 3.71
1967 5131 3.767902 AGCATTCTCTAAGCATCTCCC 57.232 47.619 0.00 0.00 0.00 4.30
1968 5132 3.044156 AGCATTCTCTAAGCATCTCCCA 58.956 45.455 0.00 0.00 0.00 4.37
1969 5133 3.651904 AGCATTCTCTAAGCATCTCCCAT 59.348 43.478 0.00 0.00 0.00 4.00
1970 5134 4.104420 AGCATTCTCTAAGCATCTCCCATT 59.896 41.667 0.00 0.00 0.00 3.16
1971 5135 4.215827 GCATTCTCTAAGCATCTCCCATTG 59.784 45.833 0.00 0.00 0.00 2.82
1972 5136 5.374921 CATTCTCTAAGCATCTCCCATTGT 58.625 41.667 0.00 0.00 0.00 2.71
1973 5137 6.528321 CATTCTCTAAGCATCTCCCATTGTA 58.472 40.000 0.00 0.00 0.00 2.41
1974 5138 5.537300 TCTCTAAGCATCTCCCATTGTAC 57.463 43.478 0.00 0.00 0.00 2.90
1975 5139 4.962362 TCTCTAAGCATCTCCCATTGTACA 59.038 41.667 0.00 0.00 0.00 2.90
1976 5140 5.425217 TCTCTAAGCATCTCCCATTGTACAA 59.575 40.000 11.41 11.41 0.00 2.41
1977 5141 5.674525 TCTAAGCATCTCCCATTGTACAAG 58.325 41.667 14.65 6.30 0.00 3.16
1978 5142 3.287867 AGCATCTCCCATTGTACAAGG 57.712 47.619 14.65 13.92 0.00 3.61
1979 5143 1.678101 GCATCTCCCATTGTACAAGGC 59.322 52.381 14.66 0.00 0.00 4.35
1980 5144 2.301346 CATCTCCCATTGTACAAGGCC 58.699 52.381 14.66 0.00 0.00 5.19
1981 5145 1.668826 TCTCCCATTGTACAAGGCCT 58.331 50.000 14.66 0.00 0.00 5.19
1982 5146 2.840511 TCTCCCATTGTACAAGGCCTA 58.159 47.619 14.66 1.57 0.00 3.93
1983 5147 3.186283 TCTCCCATTGTACAAGGCCTAA 58.814 45.455 14.66 0.00 0.00 2.69
1984 5148 3.199946 TCTCCCATTGTACAAGGCCTAAG 59.800 47.826 14.66 4.24 0.00 2.18
1985 5149 2.241176 TCCCATTGTACAAGGCCTAAGG 59.759 50.000 14.66 9.98 0.00 2.69
1986 5150 2.654863 CCATTGTACAAGGCCTAAGGG 58.345 52.381 14.66 3.00 0.00 3.95
1987 5151 2.025321 CCATTGTACAAGGCCTAAGGGT 60.025 50.000 14.66 4.99 34.45 4.34
1988 5152 3.201266 CCATTGTACAAGGCCTAAGGGTA 59.799 47.826 14.66 3.88 34.45 3.69
1989 5153 4.324719 CCATTGTACAAGGCCTAAGGGTAA 60.325 45.833 14.66 0.00 34.45 2.85
1990 5154 4.997545 TTGTACAAGGCCTAAGGGTAAA 57.002 40.909 5.16 0.00 34.45 2.01
1991 5155 4.997545 TGTACAAGGCCTAAGGGTAAAA 57.002 40.909 5.16 0.00 34.45 1.52
1992 5156 5.321934 TGTACAAGGCCTAAGGGTAAAAA 57.678 39.130 5.16 0.00 34.45 1.94
2018 5182 9.680315 AAAATTATGCAATTTGAATTGTTGTGG 57.320 25.926 15.57 0.00 45.77 4.17
2019 5183 7.982761 ATTATGCAATTTGAATTGTTGTGGT 57.017 28.000 15.57 2.34 45.77 4.16
2020 5184 9.499479 AATTATGCAATTTGAATTGTTGTGGTA 57.501 25.926 15.57 1.63 45.77 3.25
2021 5185 6.783892 ATGCAATTTGAATTGTTGTGGTAC 57.216 33.333 15.57 0.00 45.77 3.34
2022 5186 5.664457 TGCAATTTGAATTGTTGTGGTACA 58.336 33.333 15.57 2.86 45.77 2.90
2040 5204 7.703298 TGGTACACTTGTATTATTGTATCGC 57.297 36.000 0.00 0.00 29.58 4.58
2041 5205 7.494211 TGGTACACTTGTATTATTGTATCGCT 58.506 34.615 0.00 0.00 29.58 4.93
2042 5206 7.982919 TGGTACACTTGTATTATTGTATCGCTT 59.017 33.333 0.00 0.00 29.58 4.68
2043 5207 8.273557 GGTACACTTGTATTATTGTATCGCTTG 58.726 37.037 0.00 0.00 32.54 4.01
2044 5208 7.246674 ACACTTGTATTATTGTATCGCTTGG 57.753 36.000 0.00 0.00 0.00 3.61
2045 5209 6.136071 CACTTGTATTATTGTATCGCTTGGC 58.864 40.000 0.00 0.00 0.00 4.52
2046 5210 6.017934 CACTTGTATTATTGTATCGCTTGGCT 60.018 38.462 0.00 0.00 0.00 4.75
2047 5211 7.170828 CACTTGTATTATTGTATCGCTTGGCTA 59.829 37.037 0.00 0.00 0.00 3.93
2048 5212 7.878127 ACTTGTATTATTGTATCGCTTGGCTAT 59.122 33.333 0.00 0.00 0.00 2.97
2049 5213 9.366216 CTTGTATTATTGTATCGCTTGGCTATA 57.634 33.333 0.00 0.00 0.00 1.31
2050 5214 9.884636 TTGTATTATTGTATCGCTTGGCTATAT 57.115 29.630 0.00 0.00 0.00 0.86
2051 5215 9.313118 TGTATTATTGTATCGCTTGGCTATATG 57.687 33.333 0.00 0.00 0.00 1.78
2052 5216 9.314321 GTATTATTGTATCGCTTGGCTATATGT 57.686 33.333 0.00 0.00 0.00 2.29
2053 5217 7.827819 TTATTGTATCGCTTGGCTATATGTC 57.172 36.000 0.00 0.00 0.00 3.06
2054 5218 3.833442 TGTATCGCTTGGCTATATGTCG 58.167 45.455 0.00 0.00 0.00 4.35
2055 5219 3.254903 TGTATCGCTTGGCTATATGTCGT 59.745 43.478 0.00 0.00 0.00 4.34
2056 5220 2.882927 TCGCTTGGCTATATGTCGTT 57.117 45.000 0.00 0.00 0.00 3.85
2057 5221 2.739292 TCGCTTGGCTATATGTCGTTC 58.261 47.619 0.00 0.00 0.00 3.95
2058 5222 1.452025 CGCTTGGCTATATGTCGTTCG 59.548 52.381 0.00 0.00 0.00 3.95
2059 5223 1.792949 GCTTGGCTATATGTCGTTCGG 59.207 52.381 0.00 0.00 0.00 4.30
2060 5224 2.404215 CTTGGCTATATGTCGTTCGGG 58.596 52.381 0.00 0.00 0.00 5.14
2061 5225 0.677288 TGGCTATATGTCGTTCGGGG 59.323 55.000 0.00 0.00 0.00 5.73
2062 5226 0.963962 GGCTATATGTCGTTCGGGGA 59.036 55.000 0.00 0.00 0.00 4.81
2063 5227 1.336609 GGCTATATGTCGTTCGGGGAC 60.337 57.143 0.00 0.00 34.99 4.46
2065 5229 2.607282 GCTATATGTCGTTCGGGGACAG 60.607 54.545 9.34 0.00 46.55 3.51
2066 5230 1.481871 ATATGTCGTTCGGGGACAGT 58.518 50.000 9.34 0.50 46.55 3.55
2067 5231 0.813184 TATGTCGTTCGGGGACAGTC 59.187 55.000 9.34 0.00 46.55 3.51
2068 5232 1.183030 ATGTCGTTCGGGGACAGTCA 61.183 55.000 2.17 0.00 46.55 3.41
2069 5233 1.080705 GTCGTTCGGGGACAGTCAG 60.081 63.158 2.17 0.00 34.56 3.51
2070 5234 2.261671 CGTTCGGGGACAGTCAGG 59.738 66.667 2.17 0.00 0.00 3.86
2071 5235 2.273179 CGTTCGGGGACAGTCAGGA 61.273 63.158 2.17 0.00 0.00 3.86
2072 5236 1.605058 CGTTCGGGGACAGTCAGGAT 61.605 60.000 2.17 0.00 0.00 3.24
2073 5237 0.108138 GTTCGGGGACAGTCAGGATG 60.108 60.000 2.17 0.00 37.54 3.51
2074 5238 1.264749 TTCGGGGACAGTCAGGATGG 61.265 60.000 2.17 0.00 36.16 3.51
2075 5239 1.685765 CGGGGACAGTCAGGATGGA 60.686 63.158 2.17 0.00 36.16 3.41
2076 5240 1.050988 CGGGGACAGTCAGGATGGAT 61.051 60.000 2.17 0.00 36.16 3.41
2077 5241 0.471617 GGGGACAGTCAGGATGGATG 59.528 60.000 2.17 0.00 36.16 3.51
2078 5242 1.500474 GGGACAGTCAGGATGGATGA 58.500 55.000 2.17 0.00 36.16 2.92
2079 5243 1.839994 GGGACAGTCAGGATGGATGAA 59.160 52.381 2.17 0.00 36.16 2.57
2080 5244 2.239654 GGGACAGTCAGGATGGATGAAA 59.760 50.000 2.17 0.00 36.16 2.69
2081 5245 3.308402 GGGACAGTCAGGATGGATGAAAA 60.308 47.826 2.17 0.00 36.16 2.29
2082 5246 4.530875 GGACAGTCAGGATGGATGAAAAT 58.469 43.478 2.17 0.00 36.16 1.82
2083 5247 4.337555 GGACAGTCAGGATGGATGAAAATG 59.662 45.833 2.17 0.00 36.16 2.32
2084 5248 4.275810 ACAGTCAGGATGGATGAAAATGG 58.724 43.478 0.00 0.00 36.16 3.16
2085 5249 3.067742 CAGTCAGGATGGATGAAAATGGC 59.932 47.826 0.00 0.00 36.16 4.40
2086 5250 2.033801 GTCAGGATGGATGAAAATGGCG 59.966 50.000 0.00 0.00 36.16 5.69
2087 5251 2.092484 TCAGGATGGATGAAAATGGCGA 60.092 45.455 0.00 0.00 36.16 5.54
2088 5252 2.689471 CAGGATGGATGAAAATGGCGAA 59.311 45.455 0.00 0.00 0.00 4.70
2089 5253 2.954318 AGGATGGATGAAAATGGCGAAG 59.046 45.455 0.00 0.00 0.00 3.79
2419 5583 2.202987 CAGCCCATGTCCGAGAGC 60.203 66.667 0.00 0.00 0.00 4.09
2420 5584 2.364842 AGCCCATGTCCGAGAGCT 60.365 61.111 0.00 0.00 0.00 4.09
2421 5585 1.075970 AGCCCATGTCCGAGAGCTA 60.076 57.895 0.00 0.00 0.00 3.32
2422 5586 0.470833 AGCCCATGTCCGAGAGCTAT 60.471 55.000 0.00 0.00 0.00 2.97
2423 5587 1.203063 AGCCCATGTCCGAGAGCTATA 60.203 52.381 0.00 0.00 0.00 1.31
2424 5588 1.827969 GCCCATGTCCGAGAGCTATAT 59.172 52.381 0.00 0.00 0.00 0.86
2425 5589 2.234908 GCCCATGTCCGAGAGCTATATT 59.765 50.000 0.00 0.00 0.00 1.28
2426 5590 3.447586 GCCCATGTCCGAGAGCTATATTA 59.552 47.826 0.00 0.00 0.00 0.98
2427 5591 4.100189 GCCCATGTCCGAGAGCTATATTAT 59.900 45.833 0.00 0.00 0.00 1.28
2428 5592 5.737635 GCCCATGTCCGAGAGCTATATTATC 60.738 48.000 0.00 0.00 0.00 1.75
2429 5593 5.596361 CCCATGTCCGAGAGCTATATTATCT 59.404 44.000 0.00 0.00 0.00 1.98
2430 5594 6.773200 CCCATGTCCGAGAGCTATATTATCTA 59.227 42.308 0.00 0.00 0.00 1.98
2431 5595 7.285629 CCCATGTCCGAGAGCTATATTATCTAA 59.714 40.741 0.00 0.00 0.00 2.10
2432 5596 8.132362 CCATGTCCGAGAGCTATATTATCTAAC 58.868 40.741 0.00 0.00 0.00 2.34
2433 5597 8.898761 CATGTCCGAGAGCTATATTATCTAACT 58.101 37.037 0.00 0.00 0.00 2.24
2493 5657 9.634163 AAATAATTCGTGATTACCAAAAGTTCC 57.366 29.630 0.00 0.00 33.20 3.62
2494 5658 6.642707 AATTCGTGATTACCAAAAGTTCCA 57.357 33.333 0.00 0.00 0.00 3.53
2495 5659 6.642707 ATTCGTGATTACCAAAAGTTCCAA 57.357 33.333 0.00 0.00 0.00 3.53
2496 5660 6.452494 TTCGTGATTACCAAAAGTTCCAAA 57.548 33.333 0.00 0.00 0.00 3.28
2497 5661 6.642707 TCGTGATTACCAAAAGTTCCAAAT 57.357 33.333 0.00 0.00 0.00 2.32
2498 5662 7.045126 TCGTGATTACCAAAAGTTCCAAATT 57.955 32.000 0.00 0.00 0.00 1.82
2499 5663 7.493367 TCGTGATTACCAAAAGTTCCAAATTT 58.507 30.769 0.00 0.00 0.00 1.82
2500 5664 7.982354 TCGTGATTACCAAAAGTTCCAAATTTT 59.018 29.630 0.00 0.00 36.73 1.82
2501 5665 9.250624 CGTGATTACCAAAAGTTCCAAATTTTA 57.749 29.630 0.00 0.00 34.39 1.52
2527 5691 6.651755 AAAATGTGCACTTTGAACAGAAAG 57.348 33.333 19.41 0.00 38.65 2.62
2528 5692 4.989279 ATGTGCACTTTGAACAGAAAGT 57.011 36.364 19.41 0.00 45.17 2.66
2529 5693 4.355543 TGTGCACTTTGAACAGAAAGTC 57.644 40.909 19.41 0.00 42.96 3.01
2530 5694 3.755905 TGTGCACTTTGAACAGAAAGTCA 59.244 39.130 19.41 0.00 42.96 3.41
2531 5695 4.217334 TGTGCACTTTGAACAGAAAGTCAA 59.783 37.500 19.41 0.00 42.96 3.18
2532 5696 4.795278 GTGCACTTTGAACAGAAAGTCAAG 59.205 41.667 10.32 0.00 42.96 3.02
2533 5697 4.699735 TGCACTTTGAACAGAAAGTCAAGA 59.300 37.500 0.00 0.00 42.96 3.02
2534 5698 5.182950 TGCACTTTGAACAGAAAGTCAAGAA 59.817 36.000 0.00 0.00 42.96 2.52
2535 5699 6.092748 GCACTTTGAACAGAAAGTCAAGAAA 58.907 36.000 0.00 0.00 42.96 2.52
2536 5700 6.753744 GCACTTTGAACAGAAAGTCAAGAAAT 59.246 34.615 0.00 0.00 42.96 2.17
2537 5701 7.043788 GCACTTTGAACAGAAAGTCAAGAAATC 60.044 37.037 0.00 0.00 42.96 2.17
2538 5702 7.970061 CACTTTGAACAGAAAGTCAAGAAATCA 59.030 33.333 0.00 0.00 42.96 2.57
2539 5703 8.689972 ACTTTGAACAGAAAGTCAAGAAATCAT 58.310 29.630 0.00 0.00 41.38 2.45
2588 5752 9.771915 AAAATTGTGATTTCAAACAATGTTCAC 57.228 25.926 0.00 2.89 44.24 3.18
2589 5753 6.566310 TTGTGATTTCAAACAATGTTCACG 57.434 33.333 0.00 0.00 37.34 4.35
2590 5754 5.884771 TGTGATTTCAAACAATGTTCACGA 58.115 33.333 0.00 0.00 37.34 4.35
2591 5755 6.502652 TGTGATTTCAAACAATGTTCACGAT 58.497 32.000 0.00 0.00 37.34 3.73
2592 5756 6.977502 TGTGATTTCAAACAATGTTCACGATT 59.022 30.769 0.00 0.00 37.34 3.34
2593 5757 7.490725 TGTGATTTCAAACAATGTTCACGATTT 59.509 29.630 0.00 0.00 37.34 2.17
2594 5758 7.998212 GTGATTTCAAACAATGTTCACGATTTC 59.002 33.333 0.00 0.00 30.77 2.17
2595 5759 7.704047 TGATTTCAAACAATGTTCACGATTTCA 59.296 29.630 0.00 1.49 0.00 2.69
2596 5760 7.818493 TTTCAAACAATGTTCACGATTTCAA 57.182 28.000 0.00 0.00 0.00 2.69
2597 5761 7.818493 TTCAAACAATGTTCACGATTTCAAA 57.182 28.000 0.00 0.00 0.00 2.69
2598 5762 7.818493 TCAAACAATGTTCACGATTTCAAAA 57.182 28.000 0.00 0.00 0.00 2.44
2599 5763 8.244494 TCAAACAATGTTCACGATTTCAAAAA 57.756 26.923 0.00 0.00 0.00 1.94
2600 5764 8.165428 TCAAACAATGTTCACGATTTCAAAAAC 58.835 29.630 0.00 0.00 0.00 2.43
2601 5765 7.588143 AACAATGTTCACGATTTCAAAAACA 57.412 28.000 0.00 0.00 0.00 2.83
2602 5766 7.769272 ACAATGTTCACGATTTCAAAAACAT 57.231 28.000 0.00 0.00 38.57 2.71
2603 5767 7.620215 ACAATGTTCACGATTTCAAAAACATG 58.380 30.769 0.00 0.00 37.40 3.21
2604 5768 6.768029 ATGTTCACGATTTCAAAAACATGG 57.232 33.333 0.00 0.00 36.34 3.66
2605 5769 5.655488 TGTTCACGATTTCAAAAACATGGT 58.345 33.333 0.00 0.00 0.00 3.55
2606 5770 5.746245 TGTTCACGATTTCAAAAACATGGTC 59.254 36.000 0.00 0.00 0.00 4.02
2607 5771 5.506686 TCACGATTTCAAAAACATGGTCA 57.493 34.783 0.00 0.00 0.00 4.02
2608 5772 5.277825 TCACGATTTCAAAAACATGGTCAC 58.722 37.500 0.00 0.00 0.00 3.67
2609 5773 5.039984 CACGATTTCAAAAACATGGTCACA 58.960 37.500 0.00 0.00 0.00 3.58
2610 5774 5.518128 CACGATTTCAAAAACATGGTCACAA 59.482 36.000 0.00 0.00 0.00 3.33
2611 5775 6.035435 CACGATTTCAAAAACATGGTCACAAA 59.965 34.615 0.00 0.00 0.00 2.83
2612 5776 6.591834 ACGATTTCAAAAACATGGTCACAAAA 59.408 30.769 0.00 0.00 0.00 2.44
2613 5777 7.279758 ACGATTTCAAAAACATGGTCACAAAAT 59.720 29.630 0.00 0.00 0.00 1.82
2614 5778 8.121708 CGATTTCAAAAACATGGTCACAAAATT 58.878 29.630 0.00 0.00 0.00 1.82
2615 5779 9.786105 GATTTCAAAAACATGGTCACAAAATTT 57.214 25.926 0.00 0.00 0.00 1.82
2663 5827 9.953697 AAATTCATGGTTTCAAAAATGTTCATG 57.046 25.926 0.00 0.00 34.00 3.07
2664 5828 8.905660 ATTCATGGTTTCAAAAATGTTCATGA 57.094 26.923 0.00 0.00 38.23 3.07
2665 5829 8.905660 TTCATGGTTTCAAAAATGTTCATGAT 57.094 26.923 0.00 0.00 39.24 2.45
2666 5830 8.905660 TCATGGTTTCAAAAATGTTCATGATT 57.094 26.923 0.00 0.00 36.06 2.57
2667 5831 9.339850 TCATGGTTTCAAAAATGTTCATGATTT 57.660 25.926 0.00 0.00 36.06 2.17
2668 5832 9.601971 CATGGTTTCAAAAATGTTCATGATTTC 57.398 29.630 0.00 0.00 34.43 2.17
2669 5833 8.728337 TGGTTTCAAAAATGTTCATGATTTCA 57.272 26.923 0.00 0.00 0.00 2.69
2670 5834 9.170734 TGGTTTCAAAAATGTTCATGATTTCAA 57.829 25.926 0.00 0.00 0.00 2.69
2700 5864 8.424274 AAACTTTTGTGAATTCAAAGATGTCC 57.576 30.769 20.20 3.96 38.32 4.02
2701 5865 7.111247 ACTTTTGTGAATTCAAAGATGTCCA 57.889 32.000 20.20 6.27 38.32 4.02
2702 5866 6.980397 ACTTTTGTGAATTCAAAGATGTCCAC 59.020 34.615 20.20 3.21 38.32 4.02
2703 5867 4.747540 TGTGAATTCAAAGATGTCCACG 57.252 40.909 10.35 0.00 0.00 4.94
2704 5868 3.501828 TGTGAATTCAAAGATGTCCACGG 59.498 43.478 10.35 0.00 0.00 4.94
2705 5869 3.502211 GTGAATTCAAAGATGTCCACGGT 59.498 43.478 10.35 0.00 0.00 4.83
2706 5870 4.023193 GTGAATTCAAAGATGTCCACGGTT 60.023 41.667 10.35 0.00 0.00 4.44
2707 5871 4.023279 TGAATTCAAAGATGTCCACGGTTG 60.023 41.667 5.45 0.00 0.00 3.77
2708 5872 2.920724 TCAAAGATGTCCACGGTTGA 57.079 45.000 0.00 0.00 0.00 3.18
2709 5873 3.201353 TCAAAGATGTCCACGGTTGAA 57.799 42.857 0.00 0.00 0.00 2.69
2710 5874 3.138304 TCAAAGATGTCCACGGTTGAAG 58.862 45.455 0.00 0.00 0.00 3.02
2711 5875 3.138304 CAAAGATGTCCACGGTTGAAGA 58.862 45.455 0.00 0.00 0.00 2.87
2712 5876 3.703001 AAGATGTCCACGGTTGAAGAT 57.297 42.857 0.00 0.00 0.00 2.40
2713 5877 4.819105 AAGATGTCCACGGTTGAAGATA 57.181 40.909 0.00 0.00 0.00 1.98
2714 5878 4.819105 AGATGTCCACGGTTGAAGATAA 57.181 40.909 0.00 0.00 0.00 1.75
2715 5879 5.359194 AGATGTCCACGGTTGAAGATAAT 57.641 39.130 0.00 0.00 0.00 1.28
2716 5880 5.745227 AGATGTCCACGGTTGAAGATAATT 58.255 37.500 0.00 0.00 0.00 1.40
2717 5881 5.817816 AGATGTCCACGGTTGAAGATAATTC 59.182 40.000 0.00 0.00 0.00 2.17
2718 5882 4.258543 TGTCCACGGTTGAAGATAATTCC 58.741 43.478 0.00 0.00 0.00 3.01
2719 5883 3.626217 GTCCACGGTTGAAGATAATTCCC 59.374 47.826 0.00 0.00 0.00 3.97
2720 5884 3.264706 TCCACGGTTGAAGATAATTCCCA 59.735 43.478 0.00 0.00 0.00 4.37
2721 5885 4.080015 TCCACGGTTGAAGATAATTCCCAT 60.080 41.667 0.00 0.00 0.00 4.00
2722 5886 4.036734 CCACGGTTGAAGATAATTCCCATG 59.963 45.833 0.00 0.00 0.00 3.66
2723 5887 4.881273 CACGGTTGAAGATAATTCCCATGA 59.119 41.667 0.00 0.00 0.00 3.07
2724 5888 5.356751 CACGGTTGAAGATAATTCCCATGAA 59.643 40.000 0.00 0.00 34.33 2.57
2725 5889 6.039717 CACGGTTGAAGATAATTCCCATGAAT 59.960 38.462 0.00 0.00 43.08 2.57
2727 5891 7.124147 ACGGTTGAAGATAATTCCCATGAATTT 59.876 33.333 5.91 0.00 46.57 1.82
2728 5892 7.981225 CGGTTGAAGATAATTCCCATGAATTTT 59.019 33.333 5.91 0.00 46.57 1.82
2770 5934 9.958234 TTCTAAAAATGTTCATGAATTTGTCGA 57.042 25.926 12.12 3.48 0.00 4.20
2771 5935 9.958234 TCTAAAAATGTTCATGAATTTGTCGAA 57.042 25.926 12.12 0.00 0.00 3.71
2858 6022 9.057365 TGTTCACGATTTTAATAAGATTTTCGC 57.943 29.630 0.00 0.00 0.00 4.70
2859 6023 9.057365 GTTCACGATTTTAATAAGATTTTCGCA 57.943 29.630 0.00 0.00 0.00 5.10
2860 6024 9.613957 TTCACGATTTTAATAAGATTTTCGCAA 57.386 25.926 0.00 0.00 0.00 4.85
2861 6025 9.272901 TCACGATTTTAATAAGATTTTCGCAAG 57.727 29.630 0.00 0.00 0.00 4.01
2862 6026 9.061610 CACGATTTTAATAAGATTTTCGCAAGT 57.938 29.630 0.00 0.00 39.48 3.16
2863 6027 9.620660 ACGATTTTAATAAGATTTTCGCAAGTT 57.379 25.926 0.00 0.00 39.48 2.66
2864 6028 9.871359 CGATTTTAATAAGATTTTCGCAAGTTG 57.129 29.630 0.00 0.00 39.48 3.16
2892 6056 6.901081 AACAAGGGATAAAACTGAGAAAGG 57.099 37.500 0.00 0.00 0.00 3.11
2893 6057 6.200878 ACAAGGGATAAAACTGAGAAAGGA 57.799 37.500 0.00 0.00 0.00 3.36
2894 6058 6.610830 ACAAGGGATAAAACTGAGAAAGGAA 58.389 36.000 0.00 0.00 0.00 3.36
2895 6059 7.066781 ACAAGGGATAAAACTGAGAAAGGAAA 58.933 34.615 0.00 0.00 0.00 3.13
2896 6060 7.563556 ACAAGGGATAAAACTGAGAAAGGAAAA 59.436 33.333 0.00 0.00 0.00 2.29
2897 6061 8.421002 CAAGGGATAAAACTGAGAAAGGAAAAA 58.579 33.333 0.00 0.00 0.00 1.94
2898 6062 8.727100 AGGGATAAAACTGAGAAAGGAAAAAT 57.273 30.769 0.00 0.00 0.00 1.82
2899 6063 9.822727 AGGGATAAAACTGAGAAAGGAAAAATA 57.177 29.630 0.00 0.00 0.00 1.40
2982 6146 2.256117 AAAAACTGGAGGACCTCACG 57.744 50.000 23.06 14.65 37.04 4.35
2983 6147 0.250338 AAAACTGGAGGACCTCACGC 60.250 55.000 23.06 6.56 37.04 5.34
2984 6148 2.113243 AAACTGGAGGACCTCACGCC 62.113 60.000 23.06 6.92 37.04 5.68
2985 6149 3.775654 CTGGAGGACCTCACGCCC 61.776 72.222 23.06 6.53 37.04 6.13
2988 6152 4.083862 GAGGACCTCACGCCCCAC 62.084 72.222 17.10 0.00 0.00 4.61
2989 6153 4.954118 AGGACCTCACGCCCCACA 62.954 66.667 0.00 0.00 0.00 4.17
2990 6154 3.717294 GGACCTCACGCCCCACAT 61.717 66.667 0.00 0.00 0.00 3.21
2991 6155 2.436646 GACCTCACGCCCCACATG 60.437 66.667 0.00 0.00 0.00 3.21
2992 6156 3.976701 GACCTCACGCCCCACATGG 62.977 68.421 0.00 0.00 0.00 3.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 1905 3.787001 CCTCTGTTCGCCCCTCCC 61.787 72.222 0.00 0.00 0.00 4.30
19 1914 6.256757 CCTATCGATTTGTCTTTCCTCTGTTC 59.743 42.308 1.71 0.00 0.00 3.18
20 1915 6.109359 CCTATCGATTTGTCTTTCCTCTGTT 58.891 40.000 1.71 0.00 0.00 3.16
22 1917 4.509600 GCCTATCGATTTGTCTTTCCTCTG 59.490 45.833 1.71 0.00 0.00 3.35
28 1923 5.297776 CCAATGAGCCTATCGATTTGTCTTT 59.702 40.000 1.71 0.00 0.00 2.52
34 1929 4.422073 TCACCAATGAGCCTATCGATTT 57.578 40.909 1.71 0.00 0.00 2.17
68 1963 1.493772 TGACAACTACGGCAAACTCG 58.506 50.000 0.00 0.00 0.00 4.18
82 1977 4.984295 TGTTCTTCCTCATCCATTGACAA 58.016 39.130 0.00 0.00 0.00 3.18
83 1978 4.639078 TGTTCTTCCTCATCCATTGACA 57.361 40.909 0.00 0.00 0.00 3.58
89 1984 5.488919 AGATTAGGTTGTTCTTCCTCATCCA 59.511 40.000 0.00 0.00 35.97 3.41
238 2147 1.655484 TTGCATCATCCACGTAGCAG 58.345 50.000 0.00 0.00 33.14 4.24
337 2251 7.994425 TTATTGGTGTCTTGATCTGCTTTAA 57.006 32.000 0.00 0.00 0.00 1.52
338 2252 8.461222 CAATTATTGGTGTCTTGATCTGCTTTA 58.539 33.333 0.00 0.00 0.00 1.85
339 2253 7.039504 ACAATTATTGGTGTCTTGATCTGCTTT 60.040 33.333 9.88 0.00 34.12 3.51
340 2254 6.435277 ACAATTATTGGTGTCTTGATCTGCTT 59.565 34.615 9.88 0.00 34.12 3.91
341 2255 5.948162 ACAATTATTGGTGTCTTGATCTGCT 59.052 36.000 9.88 0.00 34.12 4.24
473 2655 9.823098 GAGCATCTGCATTACTATATTTTTCAG 57.177 33.333 4.79 0.00 45.16 3.02
475 2657 9.604626 GTGAGCATCTGCATTACTATATTTTTC 57.395 33.333 4.79 0.00 45.16 2.29
481 2664 6.479990 GTGTTGTGAGCATCTGCATTACTATA 59.520 38.462 4.79 0.00 45.16 1.31
482 2665 5.295292 GTGTTGTGAGCATCTGCATTACTAT 59.705 40.000 4.79 0.00 45.16 2.12
483 2666 4.631377 GTGTTGTGAGCATCTGCATTACTA 59.369 41.667 4.79 0.00 45.16 1.82
484 2667 3.438087 GTGTTGTGAGCATCTGCATTACT 59.562 43.478 4.79 0.00 45.16 2.24
485 2668 3.725895 CGTGTTGTGAGCATCTGCATTAC 60.726 47.826 4.79 1.33 45.16 1.89
490 2673 0.867746 TTCGTGTTGTGAGCATCTGC 59.132 50.000 0.00 0.00 42.49 4.26
495 2678 1.811679 TGCGTTCGTGTTGTGAGCA 60.812 52.632 0.00 0.00 0.00 4.26
535 2718 0.939577 CGGAAGATGGCCGTGTATCG 60.940 60.000 0.00 2.03 43.66 2.92
536 2719 2.900528 CGGAAGATGGCCGTGTATC 58.099 57.895 0.00 0.00 43.66 2.24
547 3591 2.279517 GCGCATCCGTCGGAAGAT 60.280 61.111 19.76 0.00 45.19 2.40
578 3622 6.555315 ACACTTTGCTGAGTTCAACTTTAAG 58.445 36.000 0.00 0.00 0.00 1.85
698 3751 1.140816 GACTTGGAGTTGTGTCGAGC 58.859 55.000 0.00 0.00 0.00 5.03
745 3800 6.891306 TTCCCGAATAGAATGGATATGGAT 57.109 37.500 0.00 0.00 0.00 3.41
746 3801 6.696042 TTTCCCGAATAGAATGGATATGGA 57.304 37.500 0.00 0.00 0.00 3.41
747 3802 7.759489 TTTTTCCCGAATAGAATGGATATGG 57.241 36.000 0.00 0.00 0.00 2.74
867 3972 0.953960 GTCGTGGTTGGCGAAGGATT 60.954 55.000 0.00 0.00 40.19 3.01
934 4045 1.062002 GGTTGTGTCTTGTGTGTCGTG 59.938 52.381 0.00 0.00 0.00 4.35
950 4061 1.826385 ATTTGAAGGAGCGAGGGTTG 58.174 50.000 0.00 0.00 0.00 3.77
973 4096 4.706962 CGATAGGATAGGGATGTCATGTCA 59.293 45.833 0.00 0.00 0.00 3.58
974 4097 4.950475 TCGATAGGATAGGGATGTCATGTC 59.050 45.833 0.00 0.00 0.00 3.06
975 4098 4.707448 GTCGATAGGATAGGGATGTCATGT 59.293 45.833 0.00 0.00 0.00 3.21
976 4099 4.098654 GGTCGATAGGATAGGGATGTCATG 59.901 50.000 0.00 0.00 0.00 3.07
977 4100 4.264397 TGGTCGATAGGATAGGGATGTCAT 60.264 45.833 0.00 0.00 0.00 3.06
1008 4146 5.298197 ACTAACGATACTGTCACTCACTG 57.702 43.478 0.00 0.00 0.00 3.66
1042 4180 0.523966 CTCTCGTCTCGCTCTTGGTT 59.476 55.000 0.00 0.00 0.00 3.67
1176 4324 2.571757 CGGCGCAGAAGGTAGACA 59.428 61.111 10.83 0.00 0.00 3.41
1316 4464 3.832171 GCTTCGCTGCGACGACAG 61.832 66.667 29.05 21.87 42.78 3.51
1352 4500 1.335810 CGTAGCTGTGGTAATAGCCGA 59.664 52.381 0.00 0.00 41.23 5.54
1392 4540 0.363512 CGTTGAGCATCTCGAACACG 59.636 55.000 0.00 0.00 35.87 4.49
1412 4560 3.184683 CGAAGAGGTGCTCGCTGC 61.185 66.667 0.00 0.00 43.25 5.25
1418 4566 1.913451 CTCGTCGTCGAAGAGGTGCT 61.913 60.000 24.96 0.00 45.61 4.40
1767 4925 9.342308 GAGGATGTGGATGATTTATGTTTTCTA 57.658 33.333 0.00 0.00 0.00 2.10
1790 4954 1.677052 GGCCTTAGTCGTGTAGAGAGG 59.323 57.143 0.00 0.00 0.00 3.69
1791 4955 2.645802 AGGCCTTAGTCGTGTAGAGAG 58.354 52.381 0.00 0.00 0.00 3.20
1793 4957 2.492484 ACAAGGCCTTAGTCGTGTAGAG 59.508 50.000 20.00 3.39 38.60 2.43
1795 4959 3.192001 TGTACAAGGCCTTAGTCGTGTAG 59.808 47.826 20.00 4.78 42.08 2.74
1798 4962 2.736144 TGTACAAGGCCTTAGTCGTG 57.264 50.000 20.00 8.16 32.87 4.35
1807 4971 7.389053 CCTAATCTTCTATCATTGTACAAGGCC 59.611 40.741 15.24 0.00 0.00 5.19
1808 4972 7.389053 CCCTAATCTTCTATCATTGTACAAGGC 59.611 40.741 15.24 0.00 0.00 4.35
1809 4973 8.651389 TCCCTAATCTTCTATCATTGTACAAGG 58.349 37.037 13.96 13.96 0.00 3.61
1812 4976 8.651389 CCTTCCCTAATCTTCTATCATTGTACA 58.349 37.037 0.00 0.00 0.00 2.90
1813 4977 8.652290 ACCTTCCCTAATCTTCTATCATTGTAC 58.348 37.037 0.00 0.00 0.00 2.90
1814 4978 8.651389 CACCTTCCCTAATCTTCTATCATTGTA 58.349 37.037 0.00 0.00 0.00 2.41
1815 4979 7.127955 ACACCTTCCCTAATCTTCTATCATTGT 59.872 37.037 0.00 0.00 0.00 2.71
1816 4980 7.512992 ACACCTTCCCTAATCTTCTATCATTG 58.487 38.462 0.00 0.00 0.00 2.82
1817 4981 7.698163 ACACCTTCCCTAATCTTCTATCATT 57.302 36.000 0.00 0.00 0.00 2.57
1818 4982 7.698163 AACACCTTCCCTAATCTTCTATCAT 57.302 36.000 0.00 0.00 0.00 2.45
1819 4983 7.510675 AAACACCTTCCCTAATCTTCTATCA 57.489 36.000 0.00 0.00 0.00 2.15
1820 4984 8.925338 TCTAAACACCTTCCCTAATCTTCTATC 58.075 37.037 0.00 0.00 0.00 2.08
1821 4985 8.855804 TCTAAACACCTTCCCTAATCTTCTAT 57.144 34.615 0.00 0.00 0.00 1.98
1822 4986 8.120538 TCTCTAAACACCTTCCCTAATCTTCTA 58.879 37.037 0.00 0.00 0.00 2.10
1823 4987 6.960542 TCTCTAAACACCTTCCCTAATCTTCT 59.039 38.462 0.00 0.00 0.00 2.85
1824 4988 7.184067 TCTCTAAACACCTTCCCTAATCTTC 57.816 40.000 0.00 0.00 0.00 2.87
1825 4989 7.569599 TTCTCTAAACACCTTCCCTAATCTT 57.430 36.000 0.00 0.00 0.00 2.40
1826 4990 7.569599 TTTCTCTAAACACCTTCCCTAATCT 57.430 36.000 0.00 0.00 0.00 2.40
1827 4991 9.901172 TTATTTCTCTAAACACCTTCCCTAATC 57.099 33.333 0.00 0.00 0.00 1.75
1829 4993 9.511272 GTTTATTTCTCTAAACACCTTCCCTAA 57.489 33.333 2.68 0.00 40.01 2.69
1830 4994 8.105197 GGTTTATTTCTCTAAACACCTTCCCTA 58.895 37.037 8.47 0.00 41.36 3.53
1831 4995 6.946583 GGTTTATTTCTCTAAACACCTTCCCT 59.053 38.462 8.47 0.00 41.36 4.20
1832 4996 6.717997 TGGTTTATTTCTCTAAACACCTTCCC 59.282 38.462 8.47 0.00 41.36 3.97
1833 4997 7.664318 TCTGGTTTATTTCTCTAAACACCTTCC 59.336 37.037 8.47 0.00 41.36 3.46
1834 4998 8.617290 TCTGGTTTATTTCTCTAAACACCTTC 57.383 34.615 8.47 0.00 41.36 3.46
1835 4999 9.588096 AATCTGGTTTATTTCTCTAAACACCTT 57.412 29.630 8.47 0.00 41.36 3.50
1836 5000 9.588096 AAATCTGGTTTATTTCTCTAAACACCT 57.412 29.630 8.47 0.00 41.36 4.00
1851 5015 9.729281 ACCGATACTTAAGAAAAATCTGGTTTA 57.271 29.630 10.09 0.00 0.00 2.01
1852 5016 8.512138 CACCGATACTTAAGAAAAATCTGGTTT 58.488 33.333 10.09 0.00 0.00 3.27
1853 5017 7.361799 GCACCGATACTTAAGAAAAATCTGGTT 60.362 37.037 10.09 2.70 0.00 3.67
1854 5018 6.093633 GCACCGATACTTAAGAAAAATCTGGT 59.906 38.462 10.09 13.14 0.00 4.00
1855 5019 6.316390 AGCACCGATACTTAAGAAAAATCTGG 59.684 38.462 10.09 12.65 0.00 3.86
1856 5020 7.308782 AGCACCGATACTTAAGAAAAATCTG 57.691 36.000 10.09 5.80 0.00 2.90
1857 5021 7.923414 AAGCACCGATACTTAAGAAAAATCT 57.077 32.000 10.09 0.00 0.00 2.40
1860 5024 9.834628 CAAATAAGCACCGATACTTAAGAAAAA 57.165 29.630 10.09 0.00 32.43 1.94
1861 5025 9.005777 ACAAATAAGCACCGATACTTAAGAAAA 57.994 29.630 10.09 0.00 32.43 2.29
1862 5026 8.556213 ACAAATAAGCACCGATACTTAAGAAA 57.444 30.769 10.09 0.00 32.43 2.52
1863 5027 9.090692 GTACAAATAAGCACCGATACTTAAGAA 57.909 33.333 10.09 0.00 32.43 2.52
1864 5028 8.252417 TGTACAAATAAGCACCGATACTTAAGA 58.748 33.333 10.09 0.00 32.43 2.10
1865 5029 8.415192 TGTACAAATAAGCACCGATACTTAAG 57.585 34.615 0.00 0.00 32.43 1.85
1866 5030 7.493320 CCTGTACAAATAAGCACCGATACTTAA 59.507 37.037 0.00 0.00 32.43 1.85
1867 5031 6.982141 CCTGTACAAATAAGCACCGATACTTA 59.018 38.462 0.00 0.00 33.17 2.24
1868 5032 5.815740 CCTGTACAAATAAGCACCGATACTT 59.184 40.000 0.00 0.00 0.00 2.24
1869 5033 5.128171 TCCTGTACAAATAAGCACCGATACT 59.872 40.000 0.00 0.00 0.00 2.12
1870 5034 5.353938 TCCTGTACAAATAAGCACCGATAC 58.646 41.667 0.00 0.00 0.00 2.24
1871 5035 5.601583 TCCTGTACAAATAAGCACCGATA 57.398 39.130 0.00 0.00 0.00 2.92
1872 5036 4.481368 TCCTGTACAAATAAGCACCGAT 57.519 40.909 0.00 0.00 0.00 4.18
1873 5037 3.965379 TCCTGTACAAATAAGCACCGA 57.035 42.857 0.00 0.00 0.00 4.69
1874 5038 5.462398 GTCTATCCTGTACAAATAAGCACCG 59.538 44.000 0.00 0.00 0.00 4.94
1875 5039 5.462398 CGTCTATCCTGTACAAATAAGCACC 59.538 44.000 0.00 0.00 0.00 5.01
1876 5040 5.050972 GCGTCTATCCTGTACAAATAAGCAC 60.051 44.000 0.00 0.00 0.00 4.40
1877 5041 5.047847 GCGTCTATCCTGTACAAATAAGCA 58.952 41.667 0.00 0.00 0.00 3.91
1878 5042 5.290386 AGCGTCTATCCTGTACAAATAAGC 58.710 41.667 0.00 4.79 0.00 3.09
1879 5043 8.753175 GTTAAGCGTCTATCCTGTACAAATAAG 58.247 37.037 0.00 0.00 0.00 1.73
1880 5044 8.472413 AGTTAAGCGTCTATCCTGTACAAATAA 58.528 33.333 0.00 0.00 0.00 1.40
1881 5045 8.004087 AGTTAAGCGTCTATCCTGTACAAATA 57.996 34.615 0.00 0.00 0.00 1.40
1882 5046 6.875076 AGTTAAGCGTCTATCCTGTACAAAT 58.125 36.000 0.00 0.00 0.00 2.32
1883 5047 6.276832 AGTTAAGCGTCTATCCTGTACAAA 57.723 37.500 0.00 0.00 0.00 2.83
1884 5048 5.909621 AGTTAAGCGTCTATCCTGTACAA 57.090 39.130 0.00 0.00 0.00 2.41
1885 5049 7.024340 CTTAGTTAAGCGTCTATCCTGTACA 57.976 40.000 0.00 0.00 0.00 2.90
1899 5063 9.223557 TTCTACAGGAGAGACGCTTAGTTAAGC 62.224 44.444 12.72 12.72 44.08 3.09
1900 5064 4.705337 ACAGGAGAGACGCTTAGTTAAG 57.295 45.455 0.00 0.00 36.40 1.85
1901 5065 5.494724 TCTACAGGAGAGACGCTTAGTTAA 58.505 41.667 0.00 0.00 0.00 2.01
1902 5066 5.095145 TCTACAGGAGAGACGCTTAGTTA 57.905 43.478 0.00 0.00 0.00 2.24
1903 5067 3.952931 TCTACAGGAGAGACGCTTAGTT 58.047 45.455 0.00 0.00 0.00 2.24
1904 5068 3.630892 TCTACAGGAGAGACGCTTAGT 57.369 47.619 0.00 0.00 0.00 2.24
1905 5069 4.966965 TTTCTACAGGAGAGACGCTTAG 57.033 45.455 0.00 0.00 34.93 2.18
1906 5070 5.008811 GCTATTTCTACAGGAGAGACGCTTA 59.991 44.000 0.00 0.00 34.93 3.09
1907 5071 4.202070 GCTATTTCTACAGGAGAGACGCTT 60.202 45.833 0.00 0.00 34.93 4.68
1908 5072 3.316868 GCTATTTCTACAGGAGAGACGCT 59.683 47.826 0.00 0.00 34.93 5.07
1909 5073 3.551250 GGCTATTTCTACAGGAGAGACGC 60.551 52.174 0.00 0.00 34.93 5.19
1910 5074 3.004944 GGGCTATTTCTACAGGAGAGACG 59.995 52.174 0.00 0.00 34.93 4.18
1911 5075 3.004944 CGGGCTATTTCTACAGGAGAGAC 59.995 52.174 0.00 0.00 34.93 3.36
1912 5076 3.223435 CGGGCTATTTCTACAGGAGAGA 58.777 50.000 0.00 0.00 34.93 3.10
1913 5077 2.297597 CCGGGCTATTTCTACAGGAGAG 59.702 54.545 0.00 0.00 34.93 3.20
1914 5078 2.317040 CCGGGCTATTTCTACAGGAGA 58.683 52.381 0.00 0.00 0.00 3.71
1915 5079 2.040178 ACCGGGCTATTTCTACAGGAG 58.960 52.381 6.32 0.00 0.00 3.69
1916 5080 2.170012 ACCGGGCTATTTCTACAGGA 57.830 50.000 6.32 0.00 0.00 3.86
1917 5081 3.277142 AAACCGGGCTATTTCTACAGG 57.723 47.619 6.32 0.00 0.00 4.00
1918 5082 6.937436 AAATAAACCGGGCTATTTCTACAG 57.063 37.500 6.32 0.00 0.00 2.74
1919 5083 7.612633 AGAAAAATAAACCGGGCTATTTCTACA 59.387 33.333 18.20 0.00 34.96 2.74
1920 5084 7.993101 AGAAAAATAAACCGGGCTATTTCTAC 58.007 34.615 18.20 13.65 34.96 2.59
1921 5085 9.683870 TTAGAAAAATAAACCGGGCTATTTCTA 57.316 29.630 18.20 17.96 37.19 2.10
1922 5086 8.584063 TTAGAAAAATAAACCGGGCTATTTCT 57.416 30.769 18.20 18.70 38.82 2.52
1923 5087 7.434307 GCTTAGAAAAATAAACCGGGCTATTTC 59.566 37.037 18.20 14.12 29.50 2.17
1924 5088 7.093684 TGCTTAGAAAAATAAACCGGGCTATTT 60.094 33.333 6.32 11.54 30.70 1.40
1925 5089 6.378848 TGCTTAGAAAAATAAACCGGGCTATT 59.621 34.615 6.32 5.39 0.00 1.73
1926 5090 5.889289 TGCTTAGAAAAATAAACCGGGCTAT 59.111 36.000 6.32 0.00 0.00 2.97
1927 5091 5.254901 TGCTTAGAAAAATAAACCGGGCTA 58.745 37.500 6.32 0.00 0.00 3.93
1928 5092 4.083565 TGCTTAGAAAAATAAACCGGGCT 58.916 39.130 6.32 0.00 0.00 5.19
1929 5093 4.443913 TGCTTAGAAAAATAAACCGGGC 57.556 40.909 6.32 0.00 0.00 6.13
1930 5094 6.863275 AGAATGCTTAGAAAAATAAACCGGG 58.137 36.000 6.32 0.00 0.00 5.73
1931 5095 7.762382 AGAGAATGCTTAGAAAAATAAACCGG 58.238 34.615 0.00 0.00 0.00 5.28
1938 5102 9.406113 AGATGCTTAGAGAATGCTTAGAAAAAT 57.594 29.630 0.00 0.00 0.00 1.82
1939 5103 8.798859 AGATGCTTAGAGAATGCTTAGAAAAA 57.201 30.769 0.00 0.00 0.00 1.94
1940 5104 7.497249 GGAGATGCTTAGAGAATGCTTAGAAAA 59.503 37.037 0.00 0.00 0.00 2.29
1941 5105 6.989169 GGAGATGCTTAGAGAATGCTTAGAAA 59.011 38.462 0.00 0.00 0.00 2.52
1942 5106 6.463614 GGGAGATGCTTAGAGAATGCTTAGAA 60.464 42.308 0.00 0.00 0.00 2.10
1943 5107 5.011533 GGGAGATGCTTAGAGAATGCTTAGA 59.988 44.000 0.00 0.00 0.00 2.10
1944 5108 5.221601 TGGGAGATGCTTAGAGAATGCTTAG 60.222 44.000 0.00 0.00 0.00 2.18
1945 5109 4.655649 TGGGAGATGCTTAGAGAATGCTTA 59.344 41.667 0.00 0.00 0.00 3.09
1946 5110 3.457380 TGGGAGATGCTTAGAGAATGCTT 59.543 43.478 0.00 0.00 0.00 3.91
1947 5111 3.044156 TGGGAGATGCTTAGAGAATGCT 58.956 45.455 0.00 0.00 0.00 3.79
1948 5112 3.482156 TGGGAGATGCTTAGAGAATGC 57.518 47.619 0.00 0.00 0.00 3.56
1949 5113 5.374921 ACAATGGGAGATGCTTAGAGAATG 58.625 41.667 0.00 0.00 0.00 2.67
1950 5114 5.643421 ACAATGGGAGATGCTTAGAGAAT 57.357 39.130 0.00 0.00 0.00 2.40
1951 5115 5.425217 TGTACAATGGGAGATGCTTAGAGAA 59.575 40.000 0.00 0.00 0.00 2.87
1952 5116 4.962362 TGTACAATGGGAGATGCTTAGAGA 59.038 41.667 0.00 0.00 0.00 3.10
1953 5117 5.282055 TGTACAATGGGAGATGCTTAGAG 57.718 43.478 0.00 0.00 0.00 2.43
1954 5118 5.396772 CCTTGTACAATGGGAGATGCTTAGA 60.397 44.000 9.13 0.00 0.00 2.10
1955 5119 4.818546 CCTTGTACAATGGGAGATGCTTAG 59.181 45.833 9.13 0.00 0.00 2.18
1956 5120 4.780815 CCTTGTACAATGGGAGATGCTTA 58.219 43.478 9.13 0.00 0.00 3.09
1957 5121 3.624777 CCTTGTACAATGGGAGATGCTT 58.375 45.455 9.13 0.00 0.00 3.91
1958 5122 2.684927 GCCTTGTACAATGGGAGATGCT 60.685 50.000 16.08 0.00 0.00 3.79
1959 5123 1.678101 GCCTTGTACAATGGGAGATGC 59.322 52.381 16.08 3.76 0.00 3.91
1960 5124 2.092212 AGGCCTTGTACAATGGGAGATG 60.092 50.000 16.08 0.00 0.00 2.90
1961 5125 2.208872 AGGCCTTGTACAATGGGAGAT 58.791 47.619 16.08 0.53 0.00 2.75
1962 5126 1.668826 AGGCCTTGTACAATGGGAGA 58.331 50.000 16.08 0.00 0.00 3.71
1963 5127 3.545703 CTTAGGCCTTGTACAATGGGAG 58.454 50.000 12.58 1.65 0.00 4.30
1964 5128 2.241176 CCTTAGGCCTTGTACAATGGGA 59.759 50.000 12.58 0.00 0.00 4.37
1965 5129 2.654863 CCTTAGGCCTTGTACAATGGG 58.345 52.381 12.58 14.91 0.00 4.00
1966 5130 2.025321 ACCCTTAGGCCTTGTACAATGG 60.025 50.000 12.58 13.26 36.11 3.16
1967 5131 3.366052 ACCCTTAGGCCTTGTACAATG 57.634 47.619 12.58 7.68 36.11 2.82
1968 5132 5.523883 TTTACCCTTAGGCCTTGTACAAT 57.476 39.130 12.58 0.00 36.11 2.71
1969 5133 4.997545 TTTACCCTTAGGCCTTGTACAA 57.002 40.909 12.58 8.28 36.11 2.41
1970 5134 4.997545 TTTTACCCTTAGGCCTTGTACA 57.002 40.909 12.58 0.00 36.11 2.90
1997 5161 7.383572 GTGTACCACAACAATTCAAATTGCATA 59.616 33.333 13.92 0.00 40.55 3.14
1998 5162 6.202570 GTGTACCACAACAATTCAAATTGCAT 59.797 34.615 13.92 2.76 40.55 3.96
1999 5163 5.521735 GTGTACCACAACAATTCAAATTGCA 59.478 36.000 13.92 0.00 40.55 4.08
2000 5164 5.752955 AGTGTACCACAACAATTCAAATTGC 59.247 36.000 13.92 0.00 41.85 3.56
2001 5165 7.277539 ACAAGTGTACCACAACAATTCAAATTG 59.722 33.333 12.71 12.71 42.75 2.32
2002 5166 7.327214 ACAAGTGTACCACAACAATTCAAATT 58.673 30.769 0.00 0.00 35.64 1.82
2003 5167 6.872920 ACAAGTGTACCACAACAATTCAAAT 58.127 32.000 0.00 0.00 35.64 2.32
2004 5168 6.274157 ACAAGTGTACCACAACAATTCAAA 57.726 33.333 0.00 0.00 35.64 2.69
2005 5169 5.906113 ACAAGTGTACCACAACAATTCAA 57.094 34.783 0.00 0.00 35.64 2.69
2006 5170 7.575414 AATACAAGTGTACCACAACAATTCA 57.425 32.000 0.00 0.00 35.64 2.57
2008 5172 9.906660 CAATAATACAAGTGTACCACAACAATT 57.093 29.630 0.00 0.00 38.12 2.32
2009 5173 9.073475 ACAATAATACAAGTGTACCACAACAAT 57.927 29.630 0.00 0.00 36.74 2.71
2010 5174 8.453238 ACAATAATACAAGTGTACCACAACAA 57.547 30.769 0.00 0.00 36.74 2.83
2011 5175 9.727859 ATACAATAATACAAGTGTACCACAACA 57.272 29.630 0.00 0.00 36.74 3.33
2013 5177 9.089601 CGATACAATAATACAAGTGTACCACAA 57.910 33.333 0.00 0.00 36.74 3.33
2014 5178 7.223193 GCGATACAATAATACAAGTGTACCACA 59.777 37.037 0.00 0.00 36.74 4.17
2015 5179 7.437267 AGCGATACAATAATACAAGTGTACCAC 59.563 37.037 0.00 0.00 32.72 4.16
2016 5180 7.494211 AGCGATACAATAATACAAGTGTACCA 58.506 34.615 0.00 0.00 32.72 3.25
2017 5181 7.941795 AGCGATACAATAATACAAGTGTACC 57.058 36.000 0.00 0.00 32.72 3.34
2018 5182 8.273557 CCAAGCGATACAATAATACAAGTGTAC 58.726 37.037 0.00 0.00 32.72 2.90
2019 5183 7.042321 GCCAAGCGATACAATAATACAAGTGTA 60.042 37.037 0.00 0.00 34.67 2.90
2020 5184 6.238374 GCCAAGCGATACAATAATACAAGTGT 60.238 38.462 0.00 0.00 0.00 3.55
2021 5185 6.017934 AGCCAAGCGATACAATAATACAAGTG 60.018 38.462 0.00 0.00 0.00 3.16
2022 5186 6.055588 AGCCAAGCGATACAATAATACAAGT 58.944 36.000 0.00 0.00 0.00 3.16
2023 5187 6.545504 AGCCAAGCGATACAATAATACAAG 57.454 37.500 0.00 0.00 0.00 3.16
2024 5188 9.884636 ATATAGCCAAGCGATACAATAATACAA 57.115 29.630 0.00 0.00 29.84 2.41
2025 5189 9.313118 CATATAGCCAAGCGATACAATAATACA 57.687 33.333 0.00 0.00 29.84 2.29
2026 5190 9.314321 ACATATAGCCAAGCGATACAATAATAC 57.686 33.333 0.00 0.00 29.84 1.89
2027 5191 9.529325 GACATATAGCCAAGCGATACAATAATA 57.471 33.333 0.00 0.00 29.84 0.98
2028 5192 7.222805 CGACATATAGCCAAGCGATACAATAAT 59.777 37.037 0.00 0.00 29.84 1.28
2029 5193 6.530181 CGACATATAGCCAAGCGATACAATAA 59.470 38.462 0.00 0.00 29.84 1.40
2030 5194 6.033966 CGACATATAGCCAAGCGATACAATA 58.966 40.000 0.00 0.00 29.84 1.90
2031 5195 4.864806 CGACATATAGCCAAGCGATACAAT 59.135 41.667 0.00 0.00 29.84 2.71
2032 5196 4.234574 CGACATATAGCCAAGCGATACAA 58.765 43.478 0.00 0.00 29.84 2.41
2033 5197 3.254903 ACGACATATAGCCAAGCGATACA 59.745 43.478 0.00 0.00 29.84 2.29
2034 5198 3.834610 ACGACATATAGCCAAGCGATAC 58.165 45.455 0.00 0.00 29.84 2.24
2035 5199 4.482386 GAACGACATATAGCCAAGCGATA 58.518 43.478 0.00 0.00 31.46 2.92
2036 5200 3.318017 GAACGACATATAGCCAAGCGAT 58.682 45.455 0.00 0.00 0.00 4.58
2037 5201 2.739292 GAACGACATATAGCCAAGCGA 58.261 47.619 0.00 0.00 0.00 4.93
2038 5202 1.452025 CGAACGACATATAGCCAAGCG 59.548 52.381 0.00 0.00 0.00 4.68
2039 5203 1.792949 CCGAACGACATATAGCCAAGC 59.207 52.381 0.00 0.00 0.00 4.01
2040 5204 2.404215 CCCGAACGACATATAGCCAAG 58.596 52.381 0.00 0.00 0.00 3.61
2041 5205 1.069513 CCCCGAACGACATATAGCCAA 59.930 52.381 0.00 0.00 0.00 4.52
2042 5206 0.677288 CCCCGAACGACATATAGCCA 59.323 55.000 0.00 0.00 0.00 4.75
2043 5207 0.963962 TCCCCGAACGACATATAGCC 59.036 55.000 0.00 0.00 0.00 3.93
2044 5208 1.338973 TGTCCCCGAACGACATATAGC 59.661 52.381 0.00 0.00 35.35 2.97
2045 5209 2.621998 ACTGTCCCCGAACGACATATAG 59.378 50.000 0.00 0.00 39.43 1.31
2046 5210 2.620115 GACTGTCCCCGAACGACATATA 59.380 50.000 0.00 0.00 39.43 0.86
2047 5211 1.407979 GACTGTCCCCGAACGACATAT 59.592 52.381 0.00 0.00 39.43 1.78
2048 5212 0.813184 GACTGTCCCCGAACGACATA 59.187 55.000 0.00 0.00 39.43 2.29
2049 5213 1.183030 TGACTGTCCCCGAACGACAT 61.183 55.000 5.17 0.00 39.43 3.06
2050 5214 1.802337 CTGACTGTCCCCGAACGACA 61.802 60.000 5.17 0.00 37.91 4.35
2051 5215 1.080705 CTGACTGTCCCCGAACGAC 60.081 63.158 5.17 0.00 0.00 4.34
2052 5216 2.273179 CCTGACTGTCCCCGAACGA 61.273 63.158 5.17 0.00 0.00 3.85
2053 5217 1.605058 ATCCTGACTGTCCCCGAACG 61.605 60.000 5.17 0.00 0.00 3.95
2054 5218 0.108138 CATCCTGACTGTCCCCGAAC 60.108 60.000 5.17 0.00 0.00 3.95
2055 5219 1.264749 CCATCCTGACTGTCCCCGAA 61.265 60.000 5.17 0.00 0.00 4.30
2056 5220 1.685765 CCATCCTGACTGTCCCCGA 60.686 63.158 5.17 0.00 0.00 5.14
2057 5221 1.050988 ATCCATCCTGACTGTCCCCG 61.051 60.000 5.17 0.00 0.00 5.73
2058 5222 0.471617 CATCCATCCTGACTGTCCCC 59.528 60.000 5.17 0.00 0.00 4.81
2059 5223 1.500474 TCATCCATCCTGACTGTCCC 58.500 55.000 5.17 0.00 0.00 4.46
2060 5224 3.634397 TTTCATCCATCCTGACTGTCC 57.366 47.619 5.17 0.00 0.00 4.02
2061 5225 4.337555 CCATTTTCATCCATCCTGACTGTC 59.662 45.833 0.00 0.00 0.00 3.51
2062 5226 4.275810 CCATTTTCATCCATCCTGACTGT 58.724 43.478 0.00 0.00 0.00 3.55
2063 5227 3.067742 GCCATTTTCATCCATCCTGACTG 59.932 47.826 0.00 0.00 0.00 3.51
2064 5228 3.294214 GCCATTTTCATCCATCCTGACT 58.706 45.455 0.00 0.00 0.00 3.41
2065 5229 2.033801 CGCCATTTTCATCCATCCTGAC 59.966 50.000 0.00 0.00 0.00 3.51
2066 5230 2.092484 TCGCCATTTTCATCCATCCTGA 60.092 45.455 0.00 0.00 0.00 3.86
2067 5231 2.300433 TCGCCATTTTCATCCATCCTG 58.700 47.619 0.00 0.00 0.00 3.86
2068 5232 2.734755 TCGCCATTTTCATCCATCCT 57.265 45.000 0.00 0.00 0.00 3.24
2069 5233 2.544486 GCTTCGCCATTTTCATCCATCC 60.544 50.000 0.00 0.00 0.00 3.51
2070 5234 2.360165 AGCTTCGCCATTTTCATCCATC 59.640 45.455 0.00 0.00 0.00 3.51
2071 5235 2.381911 AGCTTCGCCATTTTCATCCAT 58.618 42.857 0.00 0.00 0.00 3.41
2072 5236 1.838112 AGCTTCGCCATTTTCATCCA 58.162 45.000 0.00 0.00 0.00 3.41
2073 5237 3.304928 CCATAGCTTCGCCATTTTCATCC 60.305 47.826 0.00 0.00 0.00 3.51
2074 5238 3.304928 CCCATAGCTTCGCCATTTTCATC 60.305 47.826 0.00 0.00 0.00 2.92
2075 5239 2.624838 CCCATAGCTTCGCCATTTTCAT 59.375 45.455 0.00 0.00 0.00 2.57
2076 5240 2.023673 CCCATAGCTTCGCCATTTTCA 58.976 47.619 0.00 0.00 0.00 2.69
2077 5241 2.024414 ACCCATAGCTTCGCCATTTTC 58.976 47.619 0.00 0.00 0.00 2.29
2078 5242 2.143876 ACCCATAGCTTCGCCATTTT 57.856 45.000 0.00 0.00 0.00 1.82
2079 5243 2.143876 AACCCATAGCTTCGCCATTT 57.856 45.000 0.00 0.00 0.00 2.32
2080 5244 1.750778 CAAACCCATAGCTTCGCCATT 59.249 47.619 0.00 0.00 0.00 3.16
2081 5245 1.064758 TCAAACCCATAGCTTCGCCAT 60.065 47.619 0.00 0.00 0.00 4.40
2082 5246 0.326595 TCAAACCCATAGCTTCGCCA 59.673 50.000 0.00 0.00 0.00 5.69
2083 5247 1.132453 GTTCAAACCCATAGCTTCGCC 59.868 52.381 0.00 0.00 0.00 5.54
2084 5248 1.132453 GGTTCAAACCCATAGCTTCGC 59.868 52.381 0.00 0.00 43.43 4.70
2085 5249 1.396996 CGGTTCAAACCCATAGCTTCG 59.603 52.381 6.34 0.00 46.53 3.79
2086 5250 1.743394 CCGGTTCAAACCCATAGCTTC 59.257 52.381 6.34 0.00 46.53 3.86
2087 5251 1.834188 CCGGTTCAAACCCATAGCTT 58.166 50.000 6.34 0.00 46.53 3.74
2088 5252 0.679960 GCCGGTTCAAACCCATAGCT 60.680 55.000 1.90 0.00 46.53 3.32
2089 5253 1.807226 GCCGGTTCAAACCCATAGC 59.193 57.895 1.90 1.53 46.53 2.97
2090 5254 2.094904 CGCCGGTTCAAACCCATAG 58.905 57.895 1.90 0.00 46.53 2.23
2091 5255 4.305011 CGCCGGTTCAAACCCATA 57.695 55.556 1.90 0.00 46.53 2.74
2402 5566 1.395045 TAGCTCTCGGACATGGGCTG 61.395 60.000 0.00 0.00 0.00 4.85
2403 5567 0.470833 ATAGCTCTCGGACATGGGCT 60.471 55.000 0.00 0.00 0.00 5.19
2404 5568 1.257743 TATAGCTCTCGGACATGGGC 58.742 55.000 0.00 0.00 0.00 5.36
2405 5569 5.596361 AGATAATATAGCTCTCGGACATGGG 59.404 44.000 0.00 0.00 0.00 4.00
2406 5570 6.707440 AGATAATATAGCTCTCGGACATGG 57.293 41.667 0.00 0.00 0.00 3.66
2407 5571 8.898761 AGTTAGATAATATAGCTCTCGGACATG 58.101 37.037 0.00 0.00 0.00 3.21
2467 5631 9.634163 GGAACTTTTGGTAATCACGAATTATTT 57.366 29.630 0.00 0.00 32.53 1.40
2468 5632 8.798402 TGGAACTTTTGGTAATCACGAATTATT 58.202 29.630 0.00 0.00 32.53 1.40
2469 5633 8.343168 TGGAACTTTTGGTAATCACGAATTAT 57.657 30.769 0.00 0.00 32.53 1.28
2470 5634 7.747155 TGGAACTTTTGGTAATCACGAATTA 57.253 32.000 0.00 0.00 0.00 1.40
2471 5635 6.642707 TGGAACTTTTGGTAATCACGAATT 57.357 33.333 0.00 0.00 0.00 2.17
2472 5636 6.642707 TTGGAACTTTTGGTAATCACGAAT 57.357 33.333 0.00 0.00 0.00 3.34
2473 5637 6.452494 TTTGGAACTTTTGGTAATCACGAA 57.548 33.333 0.00 0.00 0.00 3.85
2474 5638 6.642707 ATTTGGAACTTTTGGTAATCACGA 57.357 33.333 0.00 0.00 0.00 4.35
2475 5639 7.707774 AAATTTGGAACTTTTGGTAATCACG 57.292 32.000 0.00 0.00 0.00 4.35
2503 5667 6.650390 ACTTTCTGTTCAAAGTGCACATTTTT 59.350 30.769 21.04 8.22 43.57 1.94
2504 5668 6.165577 ACTTTCTGTTCAAAGTGCACATTTT 58.834 32.000 21.04 9.01 43.57 1.82
2505 5669 5.723295 ACTTTCTGTTCAAAGTGCACATTT 58.277 33.333 21.04 13.36 43.57 2.32
2506 5670 5.105797 TGACTTTCTGTTCAAAGTGCACATT 60.106 36.000 21.04 11.14 44.91 2.71
2507 5671 4.398988 TGACTTTCTGTTCAAAGTGCACAT 59.601 37.500 21.04 3.48 44.91 3.21
2508 5672 3.755905 TGACTTTCTGTTCAAAGTGCACA 59.244 39.130 21.04 0.00 44.91 4.57
2509 5673 4.355543 TGACTTTCTGTTCAAAGTGCAC 57.644 40.909 9.40 9.40 44.91 4.57
2510 5674 4.699735 TCTTGACTTTCTGTTCAAAGTGCA 59.300 37.500 3.36 0.00 44.91 4.57
2511 5675 5.235305 TCTTGACTTTCTGTTCAAAGTGC 57.765 39.130 3.36 0.00 44.91 4.40
2512 5676 7.970061 TGATTTCTTGACTTTCTGTTCAAAGTG 59.030 33.333 3.36 0.00 44.91 3.16
2562 5726 9.771915 GTGAACATTGTTTGAAATCACAATTTT 57.228 25.926 3.08 0.00 40.85 1.82
2563 5727 8.115520 CGTGAACATTGTTTGAAATCACAATTT 58.884 29.630 14.22 0.72 40.85 1.82
2564 5728 7.490725 TCGTGAACATTGTTTGAAATCACAATT 59.509 29.630 14.22 0.00 40.85 2.32
2565 5729 6.977502 TCGTGAACATTGTTTGAAATCACAAT 59.022 30.769 14.22 0.00 43.06 2.71
2566 5730 6.325596 TCGTGAACATTGTTTGAAATCACAA 58.674 32.000 14.22 0.00 37.08 3.33
2567 5731 5.884771 TCGTGAACATTGTTTGAAATCACA 58.115 33.333 14.22 0.22 37.08 3.58
2568 5732 6.991485 ATCGTGAACATTGTTTGAAATCAC 57.009 33.333 3.08 5.37 35.54 3.06
2569 5733 7.704047 TGAAATCGTGAACATTGTTTGAAATCA 59.296 29.630 3.08 8.27 0.00 2.57
2570 5734 8.060020 TGAAATCGTGAACATTGTTTGAAATC 57.940 30.769 3.08 6.28 0.00 2.17
2571 5735 8.417780 TTGAAATCGTGAACATTGTTTGAAAT 57.582 26.923 3.08 0.00 0.00 2.17
2572 5736 7.818493 TTGAAATCGTGAACATTGTTTGAAA 57.182 28.000 3.08 0.00 0.00 2.69
2573 5737 7.818493 TTTGAAATCGTGAACATTGTTTGAA 57.182 28.000 3.08 0.00 0.00 2.69
2574 5738 7.818493 TTTTGAAATCGTGAACATTGTTTGA 57.182 28.000 3.08 3.37 0.00 2.69
2575 5739 7.954248 TGTTTTTGAAATCGTGAACATTGTTTG 59.046 29.630 3.08 0.00 0.00 2.93
2576 5740 8.023050 TGTTTTTGAAATCGTGAACATTGTTT 57.977 26.923 3.08 0.00 0.00 2.83
2577 5741 7.588143 TGTTTTTGAAATCGTGAACATTGTT 57.412 28.000 0.63 0.63 0.00 2.83
2578 5742 7.254387 CCATGTTTTTGAAATCGTGAACATTGT 60.254 33.333 3.02 0.00 36.04 2.71
2579 5743 7.064674 CCATGTTTTTGAAATCGTGAACATTG 58.935 34.615 3.02 0.00 36.04 2.82
2580 5744 6.760770 ACCATGTTTTTGAAATCGTGAACATT 59.239 30.769 3.02 0.00 36.04 2.71
2581 5745 6.279882 ACCATGTTTTTGAAATCGTGAACAT 58.720 32.000 7.85 0.46 38.00 2.71
2582 5746 5.655488 ACCATGTTTTTGAAATCGTGAACA 58.345 33.333 7.85 0.00 30.03 3.18
2583 5747 5.746245 TGACCATGTTTTTGAAATCGTGAAC 59.254 36.000 7.85 0.00 30.03 3.18
2584 5748 5.746245 GTGACCATGTTTTTGAAATCGTGAA 59.254 36.000 7.85 0.00 30.03 3.18
2585 5749 5.163612 TGTGACCATGTTTTTGAAATCGTGA 60.164 36.000 7.85 0.00 30.03 4.35
2586 5750 5.039984 TGTGACCATGTTTTTGAAATCGTG 58.960 37.500 0.00 1.53 0.00 4.35
2587 5751 5.255710 TGTGACCATGTTTTTGAAATCGT 57.744 34.783 0.00 0.00 0.00 3.73
2588 5752 6.580963 TTTGTGACCATGTTTTTGAAATCG 57.419 33.333 0.00 0.00 0.00 3.34
2589 5753 9.786105 AAATTTTGTGACCATGTTTTTGAAATC 57.214 25.926 0.00 0.00 0.00 2.17
2637 5801 9.953697 CATGAACATTTTTGAAACCATGAATTT 57.046 25.926 0.00 0.00 33.90 1.82
2638 5802 9.339850 TCATGAACATTTTTGAAACCATGAATT 57.660 25.926 0.00 0.00 37.01 2.17
2639 5803 8.905660 TCATGAACATTTTTGAAACCATGAAT 57.094 26.923 0.00 0.00 37.01 2.57
2640 5804 8.905660 ATCATGAACATTTTTGAAACCATGAA 57.094 26.923 0.00 0.00 41.29 2.57
2641 5805 8.905660 AATCATGAACATTTTTGAAACCATGA 57.094 26.923 0.00 0.00 41.89 3.07
2642 5806 9.601971 GAAATCATGAACATTTTTGAAACCATG 57.398 29.630 0.00 0.00 33.49 3.66
2643 5807 9.339850 TGAAATCATGAACATTTTTGAAACCAT 57.660 25.926 0.00 0.00 0.00 3.55
2644 5808 8.728337 TGAAATCATGAACATTTTTGAAACCA 57.272 26.923 0.00 0.00 0.00 3.67
2674 5838 8.882736 GGACATCTTTGAATTCACAAAAGTTTT 58.117 29.630 7.89 0.00 38.90 2.43
2675 5839 8.040132 TGGACATCTTTGAATTCACAAAAGTTT 58.960 29.630 7.89 0.13 38.90 2.66
2676 5840 7.492344 GTGGACATCTTTGAATTCACAAAAGTT 59.508 33.333 7.89 2.15 38.90 2.66
2677 5841 6.980397 GTGGACATCTTTGAATTCACAAAAGT 59.020 34.615 7.89 4.74 38.90 2.66
2678 5842 6.142798 CGTGGACATCTTTGAATTCACAAAAG 59.857 38.462 7.89 9.68 38.90 2.27
2679 5843 5.976534 CGTGGACATCTTTGAATTCACAAAA 59.023 36.000 7.89 0.00 38.90 2.44
2680 5844 5.507149 CCGTGGACATCTTTGAATTCACAAA 60.507 40.000 7.89 0.00 37.98 2.83
2681 5845 4.023279 CCGTGGACATCTTTGAATTCACAA 60.023 41.667 7.89 5.39 0.00 3.33
2682 5846 3.501828 CCGTGGACATCTTTGAATTCACA 59.498 43.478 7.89 0.00 0.00 3.58
2683 5847 3.502211 ACCGTGGACATCTTTGAATTCAC 59.498 43.478 7.89 0.00 0.00 3.18
2684 5848 3.750371 ACCGTGGACATCTTTGAATTCA 58.250 40.909 3.38 3.38 0.00 2.57
2685 5849 4.215399 TCAACCGTGGACATCTTTGAATTC 59.785 41.667 0.00 0.00 0.00 2.17
2686 5850 4.141287 TCAACCGTGGACATCTTTGAATT 58.859 39.130 0.00 0.00 0.00 2.17
2687 5851 3.750371 TCAACCGTGGACATCTTTGAAT 58.250 40.909 0.00 0.00 0.00 2.57
2688 5852 3.201353 TCAACCGTGGACATCTTTGAA 57.799 42.857 0.00 0.00 0.00 2.69
2689 5853 2.920724 TCAACCGTGGACATCTTTGA 57.079 45.000 0.00 0.00 0.00 2.69
2690 5854 3.138304 TCTTCAACCGTGGACATCTTTG 58.862 45.455 0.00 0.00 0.00 2.77
2691 5855 3.485463 TCTTCAACCGTGGACATCTTT 57.515 42.857 0.00 0.00 0.00 2.52
2692 5856 3.703001 ATCTTCAACCGTGGACATCTT 57.297 42.857 0.00 0.00 0.00 2.40
2693 5857 4.819105 TTATCTTCAACCGTGGACATCT 57.181 40.909 0.00 0.00 0.00 2.90
2694 5858 5.007724 GGAATTATCTTCAACCGTGGACATC 59.992 44.000 0.00 0.00 0.00 3.06
2695 5859 4.881850 GGAATTATCTTCAACCGTGGACAT 59.118 41.667 0.00 0.00 0.00 3.06
2696 5860 4.258543 GGAATTATCTTCAACCGTGGACA 58.741 43.478 0.00 0.00 0.00 4.02
2697 5861 3.626217 GGGAATTATCTTCAACCGTGGAC 59.374 47.826 0.00 0.00 0.00 4.02
2698 5862 3.264706 TGGGAATTATCTTCAACCGTGGA 59.735 43.478 0.00 0.00 0.00 4.02
2699 5863 3.616219 TGGGAATTATCTTCAACCGTGG 58.384 45.455 0.00 0.00 0.00 4.94
2700 5864 4.881273 TCATGGGAATTATCTTCAACCGTG 59.119 41.667 0.00 0.00 35.42 4.94
2701 5865 5.110814 TCATGGGAATTATCTTCAACCGT 57.889 39.130 0.00 0.00 0.00 4.83
2702 5866 6.639632 ATTCATGGGAATTATCTTCAACCG 57.360 37.500 0.00 0.00 40.87 4.44
2744 5908 9.958234 TCGACAAATTCATGAACATTTTTAGAA 57.042 25.926 11.07 0.00 0.00 2.10
2745 5909 9.958234 TTCGACAAATTCATGAACATTTTTAGA 57.042 25.926 11.07 5.06 0.00 2.10
2832 5996 9.057365 GCGAAAATCTTATTAAAATCGTGAACA 57.943 29.630 0.00 0.00 0.00 3.18
2833 5997 9.057365 TGCGAAAATCTTATTAAAATCGTGAAC 57.943 29.630 0.00 0.00 0.00 3.18
2834 5998 9.613957 TTGCGAAAATCTTATTAAAATCGTGAA 57.386 25.926 0.00 0.00 0.00 3.18
2835 5999 9.272901 CTTGCGAAAATCTTATTAAAATCGTGA 57.727 29.630 0.00 0.00 0.00 4.35
2836 6000 9.061610 ACTTGCGAAAATCTTATTAAAATCGTG 57.938 29.630 0.00 0.00 0.00 4.35
2837 6001 9.620660 AACTTGCGAAAATCTTATTAAAATCGT 57.379 25.926 0.00 0.00 0.00 3.73
2838 6002 9.871359 CAACTTGCGAAAATCTTATTAAAATCG 57.129 29.630 0.00 0.00 0.00 3.34
2866 6030 8.204160 CCTTTCTCAGTTTTATCCCTTGTTTTT 58.796 33.333 0.00 0.00 0.00 1.94
2867 6031 7.563556 TCCTTTCTCAGTTTTATCCCTTGTTTT 59.436 33.333 0.00 0.00 0.00 2.43
2868 6032 7.066781 TCCTTTCTCAGTTTTATCCCTTGTTT 58.933 34.615 0.00 0.00 0.00 2.83
2869 6033 6.610830 TCCTTTCTCAGTTTTATCCCTTGTT 58.389 36.000 0.00 0.00 0.00 2.83
2870 6034 6.200878 TCCTTTCTCAGTTTTATCCCTTGT 57.799 37.500 0.00 0.00 0.00 3.16
2871 6035 7.524717 TTTCCTTTCTCAGTTTTATCCCTTG 57.475 36.000 0.00 0.00 0.00 3.61
2872 6036 8.547481 TTTTTCCTTTCTCAGTTTTATCCCTT 57.453 30.769 0.00 0.00 0.00 3.95
2873 6037 8.727100 ATTTTTCCTTTCTCAGTTTTATCCCT 57.273 30.769 0.00 0.00 0.00 4.20
2963 6127 1.814248 GCGTGAGGTCCTCCAGTTTTT 60.814 52.381 16.60 0.00 35.89 1.94
2964 6128 0.250338 GCGTGAGGTCCTCCAGTTTT 60.250 55.000 16.60 0.00 35.89 2.43
2965 6129 1.371558 GCGTGAGGTCCTCCAGTTT 59.628 57.895 16.60 0.00 35.89 2.66
2966 6130 2.584391 GGCGTGAGGTCCTCCAGTT 61.584 63.158 16.60 0.00 35.89 3.16
2967 6131 2.997897 GGCGTGAGGTCCTCCAGT 60.998 66.667 16.60 0.00 35.89 4.00
2968 6132 3.775654 GGGCGTGAGGTCCTCCAG 61.776 72.222 16.60 10.93 37.47 3.86
2971 6135 4.083862 GTGGGGCGTGAGGTCCTC 62.084 72.222 12.40 12.40 41.51 3.71
2972 6136 4.954118 TGTGGGGCGTGAGGTCCT 62.954 66.667 0.00 0.00 41.51 3.85
2973 6137 3.717294 ATGTGGGGCGTGAGGTCC 61.717 66.667 0.00 0.00 40.84 4.46
2974 6138 2.436646 CATGTGGGGCGTGAGGTC 60.437 66.667 0.00 0.00 36.21 3.85
2975 6139 4.033776 CCATGTGGGGCGTGAGGT 62.034 66.667 0.00 0.00 36.21 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.