Multiple sequence alignment - TraesCS1B01G442500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G442500 chr1B 100.000 5860 0 0 1 5860 663042981 663048840 0.000000e+00 10822.0
1 TraesCS1B01G442500 chr1B 85.606 132 7 1 5112 5243 274452180 274452061 1.710000e-25 128.0
2 TraesCS1B01G442500 chr1B 87.179 78 7 3 5047 5122 280757539 280757615 1.050000e-12 86.1
3 TraesCS1B01G442500 chr1D 86.125 2890 163 87 816 3545 476702109 476704920 0.000000e+00 2896.0
4 TraesCS1B01G442500 chr1D 89.316 833 59 16 4230 5045 476705599 476706418 0.000000e+00 1018.0
5 TraesCS1B01G442500 chr1D 92.780 651 44 3 3581 4229 476704922 476705571 0.000000e+00 939.0
6 TraesCS1B01G442500 chr1D 88.843 242 11 4 160 398 476701246 476701474 3.460000e-72 283.0
7 TraesCS1B01G442500 chr1D 80.637 377 46 20 4230 4582 32440879 32441252 3.480000e-67 267.0
8 TraesCS1B01G442500 chr1D 92.500 120 4 4 395 514 476701788 476701902 3.630000e-37 167.0
9 TraesCS1B01G442500 chr1D 95.890 73 2 1 5047 5118 476706453 476706525 3.710000e-22 117.0
10 TraesCS1B01G442500 chr1D 94.521 73 3 1 5047 5118 461421319 461421391 1.730000e-20 111.0
11 TraesCS1B01G442500 chr1D 86.905 84 8 2 691 774 476701940 476702020 2.250000e-14 91.6
12 TraesCS1B01G442500 chr1A 88.080 2542 169 56 2556 5017 572573326 572575813 0.000000e+00 2892.0
13 TraesCS1B01G442500 chr1A 88.339 1415 72 31 816 2164 572571544 572572931 0.000000e+00 1613.0
14 TraesCS1B01G442500 chr1A 82.973 370 33 14 2202 2552 572572937 572573295 2.050000e-79 307.0
15 TraesCS1B01G442500 chr1A 80.315 381 48 14 4229 4585 31554549 31554172 4.500000e-66 263.0
16 TraesCS1B01G442500 chr1A 89.231 195 10 4 193 384 572570719 572570905 3.530000e-57 233.0
17 TraesCS1B01G442500 chr1A 95.413 109 3 2 517 625 58903837 58903731 7.810000e-39 172.0
18 TraesCS1B01G442500 chr1A 82.258 124 11 7 387 509 572571233 572571346 4.830000e-16 97.1
19 TraesCS1B01G442500 chr2A 87.114 745 67 14 5116 5844 724615670 724614939 0.000000e+00 817.0
20 TraesCS1B01G442500 chr2A 96.078 102 4 0 517 618 333768816 333768715 3.630000e-37 167.0
21 TraesCS1B01G442500 chr5D 85.868 743 63 22 5118 5844 436934819 436935535 0.000000e+00 752.0
22 TraesCS1B01G442500 chr5D 84.800 125 7 2 5116 5240 301670561 301670449 1.330000e-21 115.0
23 TraesCS1B01G442500 chr5D 94.521 73 3 1 5047 5118 388052905 388052977 1.730000e-20 111.0
24 TraesCS1B01G442500 chr5D 80.172 116 18 5 2 115 297141050 297141162 1.350000e-11 82.4
25 TraesCS1B01G442500 chr5D 79.130 115 21 3 2 115 386144816 386144928 6.300000e-10 76.8
26 TraesCS1B01G442500 chr2D 86.998 423 41 10 5171 5588 81813372 81812959 1.150000e-126 464.0
27 TraesCS1B01G442500 chr2D 95.413 109 3 2 512 618 542514672 542514780 7.810000e-39 172.0
28 TraesCS1B01G442500 chr2D 88.489 139 13 3 517 652 375642431 375642293 1.310000e-36 165.0
29 TraesCS1B01G442500 chr2D 93.056 72 4 1 5109 5179 5312081 5312152 2.890000e-18 104.0
30 TraesCS1B01G442500 chr2D 77.686 121 26 1 2 121 43754195 43754315 8.150000e-09 73.1
31 TraesCS1B01G442500 chr6D 83.471 484 51 15 5112 5588 161718040 161717579 1.950000e-114 424.0
32 TraesCS1B01G442500 chr6D 92.437 119 5 3 508 623 38219666 38219549 3.630000e-37 167.0
33 TraesCS1B01G442500 chr6D 84.000 125 7 5 5116 5240 322729823 322729712 2.230000e-19 108.0
34 TraesCS1B01G442500 chr6D 83.761 117 7 1 5117 5233 103843711 103843607 3.740000e-17 100.0
35 TraesCS1B01G442500 chr6D 82.258 124 9 1 5117 5240 66013334 66013224 1.740000e-15 95.3
36 TraesCS1B01G442500 chr6D 90.141 71 5 2 5171 5240 464295214 464295283 2.250000e-14 91.6
37 TraesCS1B01G442500 chr7B 84.516 465 26 22 979 1401 236328567 236328107 9.080000e-113 418.0
38 TraesCS1B01G442500 chr7B 90.756 119 10 1 1229 1346 713752062 713751944 2.190000e-34 158.0
39 TraesCS1B01G442500 chr2B 92.857 210 13 2 5122 5329 199758898 199759107 2.650000e-78 303.0
40 TraesCS1B01G442500 chr2B 81.167 377 44 17 4230 4582 133645663 133646036 1.610000e-70 278.0
41 TraesCS1B01G442500 chr2B 79.630 378 48 18 4230 4582 129743519 129743892 1.630000e-60 244.0
42 TraesCS1B01G442500 chr2B 80.342 117 20 3 2 117 79308358 79308472 1.050000e-12 86.1
43 TraesCS1B01G442500 chr3B 79.398 432 73 11 3080 3498 422917393 422916965 2.070000e-74 291.0
44 TraesCS1B01G442500 chr3B 80.371 377 47 17 4230 4582 739401817 739402190 1.620000e-65 261.0
45 TraesCS1B01G442500 chr3B 89.076 119 12 1 1229 1346 32567936 32568054 4.730000e-31 147.0
46 TraesCS1B01G442500 chr3B 95.833 72 2 1 5047 5117 529407818 529407889 1.330000e-21 115.0
47 TraesCS1B01G442500 chr3B 97.619 42 1 0 1129 1170 800695527 800695568 8.150000e-09 73.1
48 TraesCS1B01G442500 chrUn 89.815 216 14 4 5117 5329 79293729 79293939 2.690000e-68 270.0
49 TraesCS1B01G442500 chrUn 89.352 216 15 4 5117 5329 79262379 79262589 1.250000e-66 265.0
50 TraesCS1B01G442500 chrUn 83.962 212 30 4 4229 4437 204485986 204485776 3.580000e-47 200.0
51 TraesCS1B01G442500 chrUn 83.491 212 31 4 4229 4437 231022331 231022121 1.670000e-45 195.0
52 TraesCS1B01G442500 chr3A 80.106 377 49 16 4229 4582 718582229 718582602 2.100000e-64 257.0
53 TraesCS1B01G442500 chr3A 80.052 381 49 12 4229 4585 737160401 737160024 2.100000e-64 257.0
54 TraesCS1B01G442500 chr3A 87.500 192 24 0 3305 3496 439915628 439915819 7.640000e-54 222.0
55 TraesCS1B01G442500 chr3A 94.737 114 3 2 508 618 614468538 614468425 2.170000e-39 174.0
56 TraesCS1B01G442500 chr3A 94.643 112 4 1 512 621 697472340 697472451 7.810000e-39 172.0
57 TraesCS1B01G442500 chr3A 92.857 56 3 1 2 57 749569911 749569965 4.870000e-11 80.5
58 TraesCS1B01G442500 chr5B 80.000 380 49 12 4230 4585 641906164 641905788 7.540000e-64 255.0
59 TraesCS1B01G442500 chr5B 79.310 116 20 3 2 115 563469978 563469865 1.750000e-10 78.7
60 TraesCS1B01G442500 chr5A 79.790 381 49 18 4229 4585 564671727 564671351 9.750000e-63 252.0
61 TraesCS1B01G442500 chr5A 94.690 113 4 1 511 621 436196059 436195947 2.170000e-39 174.0
62 TraesCS1B01G442500 chr5A 86.400 125 5 2 5116 5240 635944155 635944043 6.160000e-25 126.0
63 TraesCS1B01G442500 chr4A 79.894 378 49 14 4229 4582 635523288 635523662 9.750000e-63 252.0
64 TraesCS1B01G442500 chr4A 90.845 142 13 0 1234 1375 97526599 97526458 2.160000e-44 191.0
65 TraesCS1B01G442500 chr4A 79.496 278 39 12 5518 5784 605795840 605796110 1.300000e-41 182.0
66 TraesCS1B01G442500 chr4A 83.333 96 15 1 2 96 644029558 644029653 2.910000e-13 87.9
67 TraesCS1B01G442500 chr6A 79.896 383 44 24 4230 4585 428362330 428361954 3.510000e-62 250.0
68 TraesCS1B01G442500 chr6A 89.916 119 11 1 1229 1346 435591784 435591666 1.020000e-32 152.0
69 TraesCS1B01G442500 chr6A 84.746 118 6 4 5116 5233 604748662 604748557 2.230000e-19 108.0
70 TraesCS1B01G442500 chr6A 92.857 70 5 0 5171 5240 125082124 125082055 1.040000e-17 102.0
71 TraesCS1B01G442500 chr4B 79.573 328 41 17 4282 4585 565627551 565627226 1.650000e-50 211.0
72 TraesCS1B01G442500 chr3D 86.154 195 27 0 3304 3498 325406580 325406386 1.650000e-50 211.0
73 TraesCS1B01G442500 chr3D 86.207 87 8 4 5091 5175 113259010 113259094 2.250000e-14 91.6
74 TraesCS1B01G442500 chr3D 86.047 86 4 4 1125 1210 570492178 570492101 1.050000e-12 86.1
75 TraesCS1B01G442500 chr3D 78.571 112 22 2 2 112 317197264 317197374 8.150000e-09 73.1
76 TraesCS1B01G442500 chr7D 94.915 118 3 2 505 619 621738231 621738348 1.300000e-41 182.0
77 TraesCS1B01G442500 chr7D 92.982 114 8 0 1229 1342 474193474 474193361 3.630000e-37 167.0
78 TraesCS1B01G442500 chr7D 92.308 78 5 1 5042 5118 538377018 538377095 6.210000e-20 110.0
79 TraesCS1B01G442500 chr4D 91.453 117 9 1 1230 1346 465184588 465184703 6.080000e-35 159.0
80 TraesCS1B01G442500 chr4D 94.521 73 3 1 5047 5118 36603180 36603108 1.730000e-20 111.0
81 TraesCS1B01G442500 chr4D 94.521 73 3 1 5047 5118 75266881 75266809 1.730000e-20 111.0
82 TraesCS1B01G442500 chr4D 85.556 90 9 4 5092 5179 311730540 311730627 2.250000e-14 91.6
83 TraesCS1B01G442500 chr4D 81.818 77 14 0 1 77 47502084 47502160 1.360000e-06 65.8
84 TraesCS1B01G442500 chr7A 94.521 73 3 1 5047 5118 498937234 498937306 1.730000e-20 111.0
85 TraesCS1B01G442500 chr7A 89.011 91 7 2 5066 5155 458767237 458767325 6.210000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G442500 chr1B 663042981 663048840 5859 False 10822.000000 10822 100.0000 1 5860 1 chr1B.!!$F2 5859
1 TraesCS1B01G442500 chr1D 476701246 476706525 5279 False 787.371429 2896 90.3370 160 5118 7 chr1D.!!$F3 4958
2 TraesCS1B01G442500 chr1A 572570719 572575813 5094 False 1028.420000 2892 86.1762 193 5017 5 chr1A.!!$F1 4824
3 TraesCS1B01G442500 chr2A 724614939 724615670 731 True 817.000000 817 87.1140 5116 5844 1 chr2A.!!$R2 728
4 TraesCS1B01G442500 chr5D 436934819 436935535 716 False 752.000000 752 85.8680 5118 5844 1 chr5D.!!$F4 726

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
104 105 0.110238 CGAAACGGGTCAGCACATTG 60.110 55.0 0.0 0.0 0.00 2.82 F
972 1379 0.174162 GCAAACCTAGCTGCCCATTG 59.826 55.0 0.0 0.0 32.18 2.82 F
2902 3489 0.040067 GAAGCCTTGACCGTTGCTTG 60.040 55.0 0.0 0.0 43.63 4.01 F
2981 3568 0.036952 AACATGTGCTACTGCTCGCT 60.037 50.0 0.0 0.0 40.48 4.93 F
3249 3836 0.108472 GTACGTGCTAACCACCCTCC 60.108 60.0 0.0 0.0 41.53 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1701 2174 1.432657 GGACGAGCCGGAGAAGTAC 59.567 63.158 5.05 0.0 0.00 2.73 R
2963 3550 0.036952 AAGCGAGCAGTAGCACATGT 60.037 50.000 0.00 0.0 45.49 3.21 R
4642 5280 0.251608 AAATGGGGTGTACCTGGTGC 60.252 55.000 10.23 9.1 40.03 5.01 R
4713 5362 2.348498 CGAACTGTGTGAAACGACATGG 60.348 50.000 0.00 0.0 42.39 3.66 R
4885 5534 2.470821 ACTTTCCTCTGACAACGAACG 58.529 47.619 0.00 0.0 0.00 3.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 3.694394 GACGCGCGTCCGTTTGAA 61.694 61.111 44.30 0.00 42.24 2.69
30 31 3.007070 GACGCGCGTCCGTTTGAAT 62.007 57.895 44.30 17.02 42.24 2.57
31 32 2.275812 CGCGCGTCCGTTTGAATC 60.276 61.111 24.19 0.00 36.67 2.52
32 33 2.275812 GCGCGTCCGTTTGAATCG 60.276 61.111 8.43 0.00 36.67 3.34
33 34 2.722731 GCGCGTCCGTTTGAATCGA 61.723 57.895 8.43 0.00 36.67 3.59
34 35 1.056750 CGCGTCCGTTTGAATCGAC 59.943 57.895 0.00 0.00 0.00 4.20
35 36 1.610715 CGCGTCCGTTTGAATCGACA 61.611 55.000 0.00 0.00 0.00 4.35
36 37 0.719465 GCGTCCGTTTGAATCGACAT 59.281 50.000 0.00 0.00 0.00 3.06
37 38 1.526986 GCGTCCGTTTGAATCGACATG 60.527 52.381 0.00 0.00 0.00 3.21
38 39 1.724623 CGTCCGTTTGAATCGACATGT 59.275 47.619 0.00 0.00 0.00 3.21
39 40 2.156891 CGTCCGTTTGAATCGACATGTT 59.843 45.455 0.00 0.00 0.00 2.71
40 41 3.363575 CGTCCGTTTGAATCGACATGTTT 60.364 43.478 0.00 0.00 0.00 2.83
41 42 3.906008 GTCCGTTTGAATCGACATGTTTG 59.094 43.478 0.00 0.00 0.00 2.93
42 43 3.810386 TCCGTTTGAATCGACATGTTTGA 59.190 39.130 0.00 1.50 0.00 2.69
43 44 4.454161 TCCGTTTGAATCGACATGTTTGAT 59.546 37.500 0.00 4.16 0.00 2.57
44 45 4.788100 CCGTTTGAATCGACATGTTTGATC 59.212 41.667 13.09 5.62 0.00 2.92
45 46 4.488449 CGTTTGAATCGACATGTTTGATCG 59.512 41.667 13.09 6.32 37.20 3.69
67 68 2.410466 TTTTTGTCTGCGGTGACCC 58.590 52.632 0.00 0.00 36.21 4.46
68 69 0.394488 TTTTTGTCTGCGGTGACCCA 60.394 50.000 0.00 0.00 36.21 4.51
69 70 0.394488 TTTTGTCTGCGGTGACCCAA 60.394 50.000 0.00 0.00 36.21 4.12
70 71 0.394488 TTTGTCTGCGGTGACCCAAA 60.394 50.000 0.00 0.00 36.21 3.28
71 72 1.098712 TTGTCTGCGGTGACCCAAAC 61.099 55.000 0.00 0.00 36.21 2.93
72 73 2.112297 TCTGCGGTGACCCAAACC 59.888 61.111 0.00 0.00 0.00 3.27
77 78 4.813346 GGTGACCCAAACCGACAT 57.187 55.556 0.00 0.00 0.00 3.06
78 79 2.253513 GGTGACCCAAACCGACATG 58.746 57.895 0.00 0.00 0.00 3.21
79 80 1.579429 GTGACCCAAACCGACATGC 59.421 57.895 0.00 0.00 0.00 4.06
80 81 1.963855 TGACCCAAACCGACATGCG 60.964 57.895 0.00 0.00 40.47 4.73
81 82 3.322706 GACCCAAACCGACATGCGC 62.323 63.158 0.00 0.00 39.11 6.09
82 83 3.361158 CCCAAACCGACATGCGCA 61.361 61.111 14.96 14.96 39.11 6.09
83 84 2.176546 CCAAACCGACATGCGCAG 59.823 61.111 18.32 10.85 39.11 5.18
84 85 2.324330 CCAAACCGACATGCGCAGA 61.324 57.895 18.32 0.00 39.11 4.26
85 86 1.154413 CAAACCGACATGCGCAGAC 60.154 57.895 18.32 8.72 39.11 3.51
86 87 2.667318 AAACCGACATGCGCAGACG 61.667 57.895 18.32 19.90 44.07 4.18
87 88 3.567478 AACCGACATGCGCAGACGA 62.567 57.895 26.41 1.02 43.93 4.20
88 89 2.809174 CCGACATGCGCAGACGAA 60.809 61.111 26.41 0.28 43.93 3.85
89 90 2.379634 CCGACATGCGCAGACGAAA 61.380 57.895 26.41 0.00 43.93 3.46
90 91 1.225475 CGACATGCGCAGACGAAAC 60.225 57.895 18.32 1.94 43.93 2.78
91 92 1.225475 GACATGCGCAGACGAAACG 60.225 57.895 18.32 0.00 43.93 3.60
92 93 2.096406 CATGCGCAGACGAAACGG 59.904 61.111 18.32 0.00 43.93 4.44
93 94 3.118454 ATGCGCAGACGAAACGGG 61.118 61.111 18.32 0.00 43.93 5.28
94 95 3.876589 ATGCGCAGACGAAACGGGT 62.877 57.895 18.32 0.00 43.93 5.28
95 96 3.774702 GCGCAGACGAAACGGGTC 61.775 66.667 0.30 0.00 43.93 4.46
96 97 2.355363 CGCAGACGAAACGGGTCA 60.355 61.111 0.00 0.00 43.93 4.02
97 98 2.372690 CGCAGACGAAACGGGTCAG 61.373 63.158 0.00 0.00 43.93 3.51
98 99 2.668280 GCAGACGAAACGGGTCAGC 61.668 63.158 0.00 0.00 39.24 4.26
99 100 1.300620 CAGACGAAACGGGTCAGCA 60.301 57.895 0.00 0.00 36.87 4.41
100 101 1.300697 AGACGAAACGGGTCAGCAC 60.301 57.895 0.00 0.00 36.87 4.40
101 102 1.593209 GACGAAACGGGTCAGCACA 60.593 57.895 0.00 0.00 34.56 4.57
102 103 0.949105 GACGAAACGGGTCAGCACAT 60.949 55.000 0.00 0.00 34.56 3.21
103 104 0.534203 ACGAAACGGGTCAGCACATT 60.534 50.000 0.00 0.00 0.00 2.71
104 105 0.110238 CGAAACGGGTCAGCACATTG 60.110 55.000 0.00 0.00 0.00 2.82
105 106 1.234821 GAAACGGGTCAGCACATTGA 58.765 50.000 0.00 0.00 0.00 2.57
106 107 0.951558 AAACGGGTCAGCACATTGAC 59.048 50.000 0.00 0.00 45.28 3.18
107 108 1.227999 AACGGGTCAGCACATTGACG 61.228 55.000 0.00 0.00 46.61 4.35
108 109 1.667830 CGGGTCAGCACATTGACGT 60.668 57.895 0.00 0.00 46.61 4.34
109 110 1.227999 CGGGTCAGCACATTGACGTT 61.228 55.000 0.00 0.00 46.61 3.99
110 111 0.238289 GGGTCAGCACATTGACGTTG 59.762 55.000 0.00 0.00 46.61 4.10
111 112 0.385974 GGTCAGCACATTGACGTTGC 60.386 55.000 0.86 0.86 46.61 4.17
112 113 0.588252 GTCAGCACATTGACGTTGCT 59.412 50.000 5.86 5.86 38.23 3.91
113 114 0.867746 TCAGCACATTGACGTTGCTC 59.132 50.000 8.68 0.00 33.09 4.26
114 115 0.870393 CAGCACATTGACGTTGCTCT 59.130 50.000 8.68 0.00 33.09 4.09
115 116 1.265095 CAGCACATTGACGTTGCTCTT 59.735 47.619 8.68 0.00 33.09 2.85
116 117 2.480037 CAGCACATTGACGTTGCTCTTA 59.520 45.455 8.68 0.00 33.09 2.10
117 118 3.125829 CAGCACATTGACGTTGCTCTTAT 59.874 43.478 8.68 0.00 33.09 1.73
118 119 4.329801 CAGCACATTGACGTTGCTCTTATA 59.670 41.667 8.68 0.00 33.09 0.98
119 120 5.007039 CAGCACATTGACGTTGCTCTTATAT 59.993 40.000 8.68 0.00 33.09 0.86
120 121 5.007039 AGCACATTGACGTTGCTCTTATATG 59.993 40.000 5.86 0.00 0.00 1.78
121 122 5.220662 GCACATTGACGTTGCTCTTATATGT 60.221 40.000 1.95 0.00 0.00 2.29
122 123 6.675486 GCACATTGACGTTGCTCTTATATGTT 60.675 38.462 1.95 0.00 0.00 2.71
123 124 6.684131 CACATTGACGTTGCTCTTATATGTTG 59.316 38.462 0.00 0.00 0.00 3.33
124 125 5.794687 TTGACGTTGCTCTTATATGTTGG 57.205 39.130 0.00 0.00 0.00 3.77
125 126 5.079689 TGACGTTGCTCTTATATGTTGGA 57.920 39.130 0.00 0.00 0.00 3.53
126 127 5.670485 TGACGTTGCTCTTATATGTTGGAT 58.330 37.500 0.00 0.00 0.00 3.41
127 128 5.523552 TGACGTTGCTCTTATATGTTGGATG 59.476 40.000 0.00 0.00 0.00 3.51
128 129 5.428253 ACGTTGCTCTTATATGTTGGATGT 58.572 37.500 0.00 0.00 0.00 3.06
129 130 6.578944 ACGTTGCTCTTATATGTTGGATGTA 58.421 36.000 0.00 0.00 0.00 2.29
130 131 7.045416 ACGTTGCTCTTATATGTTGGATGTAA 58.955 34.615 0.00 0.00 0.00 2.41
131 132 7.551262 ACGTTGCTCTTATATGTTGGATGTAAA 59.449 33.333 0.00 0.00 0.00 2.01
132 133 8.559536 CGTTGCTCTTATATGTTGGATGTAAAT 58.440 33.333 0.00 0.00 0.00 1.40
133 134 9.669353 GTTGCTCTTATATGTTGGATGTAAATG 57.331 33.333 0.00 0.00 0.00 2.32
134 135 7.874940 TGCTCTTATATGTTGGATGTAAATGC 58.125 34.615 0.00 0.00 0.00 3.56
135 136 7.501892 TGCTCTTATATGTTGGATGTAAATGCA 59.498 33.333 0.00 0.00 0.00 3.96
136 137 8.517878 GCTCTTATATGTTGGATGTAAATGCAT 58.482 33.333 0.00 0.00 0.00 3.96
138 139 8.720562 TCTTATATGTTGGATGTAAATGCATCG 58.279 33.333 0.00 0.00 44.47 3.84
139 140 3.419264 TGTTGGATGTAAATGCATCGC 57.581 42.857 0.00 0.00 44.47 4.58
140 141 2.751806 TGTTGGATGTAAATGCATCGCA 59.248 40.909 0.00 0.00 44.47 5.10
150 151 2.660552 GCATCGCATTGCATGGGC 60.661 61.111 9.69 2.80 42.31 5.36
151 152 2.028484 CATCGCATTGCATGGGCC 59.972 61.111 9.69 0.00 42.34 5.80
152 153 2.442458 ATCGCATTGCATGGGCCA 60.442 55.556 9.61 9.61 42.34 5.36
153 154 2.495409 ATCGCATTGCATGGGCCAG 61.495 57.895 13.78 5.44 42.34 4.85
154 155 2.914756 ATCGCATTGCATGGGCCAGA 62.915 55.000 13.78 0.56 42.34 3.86
155 156 2.495409 CGCATTGCATGGGCCAGAT 61.495 57.895 13.78 0.13 40.13 2.90
156 157 1.174078 CGCATTGCATGGGCCAGATA 61.174 55.000 13.78 0.00 40.13 1.98
157 158 0.316204 GCATTGCATGGGCCAGATAC 59.684 55.000 13.78 1.27 40.13 2.24
158 159 1.694844 CATTGCATGGGCCAGATACA 58.305 50.000 13.78 4.28 40.13 2.29
174 175 1.687297 TACACACCACTCGCCAACCA 61.687 55.000 0.00 0.00 0.00 3.67
208 209 2.677524 TCCGTCCGTTCGTCCCAT 60.678 61.111 0.00 0.00 0.00 4.00
244 245 4.751172 GCGTTTTGCAAAGATTTCTGAAC 58.249 39.130 12.41 3.52 45.45 3.18
252 253 6.808829 TGCAAAGATTTCTGAACATTCAAGT 58.191 32.000 0.00 0.00 36.64 3.16
324 330 0.805614 AGACTCTGGATGTCGTCGTG 59.194 55.000 0.00 0.00 39.24 4.35
326 332 0.522180 ACTCTGGATGTCGTCGTGTC 59.478 55.000 0.00 0.00 0.00 3.67
327 333 0.521735 CTCTGGATGTCGTCGTGTCA 59.478 55.000 0.00 0.00 0.00 3.58
386 399 2.343101 CGAAGCAAAACGGACATCCTA 58.657 47.619 0.00 0.00 0.00 2.94
387 400 2.936498 CGAAGCAAAACGGACATCCTAT 59.064 45.455 0.00 0.00 0.00 2.57
411 743 6.963083 AGACTACTACACTTTTCTGTCTGT 57.037 37.500 0.00 0.00 33.09 3.41
465 797 7.181125 AGAGTAATCTAATCCACACCTCAAAGT 59.819 37.037 0.00 0.00 0.00 2.66
514 846 4.213482 AGCGAAAAAGGTCAAGATGTGTAC 59.787 41.667 0.00 0.00 0.00 2.90
515 847 4.213482 GCGAAAAAGGTCAAGATGTGTACT 59.787 41.667 0.00 0.00 0.00 2.73
516 848 5.614887 GCGAAAAAGGTCAAGATGTGTACTC 60.615 44.000 0.00 0.00 0.00 2.59
517 849 5.696724 CGAAAAAGGTCAAGATGTGTACTCT 59.303 40.000 0.00 0.00 0.00 3.24
518 850 6.128795 CGAAAAAGGTCAAGATGTGTACTCTC 60.129 42.308 0.00 0.00 0.00 3.20
519 851 6.426646 AAAAGGTCAAGATGTGTACTCTCT 57.573 37.500 0.00 0.00 0.00 3.10
520 852 5.398603 AAGGTCAAGATGTGTACTCTCTG 57.601 43.478 0.00 0.00 0.00 3.35
521 853 4.411927 AGGTCAAGATGTGTACTCTCTGT 58.588 43.478 0.00 0.00 0.00 3.41
522 854 4.835615 AGGTCAAGATGTGTACTCTCTGTT 59.164 41.667 0.00 0.00 0.00 3.16
523 855 5.047660 AGGTCAAGATGTGTACTCTCTGTTC 60.048 44.000 0.00 0.00 0.00 3.18
524 856 5.279006 GGTCAAGATGTGTACTCTCTGTTCA 60.279 44.000 0.00 0.00 0.00 3.18
525 857 5.631512 GTCAAGATGTGTACTCTCTGTTCAC 59.368 44.000 0.00 0.00 44.07 3.18
526 858 5.536538 TCAAGATGTGTACTCTCTGTTCACT 59.463 40.000 0.00 0.00 44.11 3.41
527 859 6.040955 TCAAGATGTGTACTCTCTGTTCACTT 59.959 38.462 0.00 1.76 44.11 3.16
528 860 6.412362 AGATGTGTACTCTCTGTTCACTTT 57.588 37.500 0.00 0.00 44.11 2.66
529 861 6.821388 AGATGTGTACTCTCTGTTCACTTTT 58.179 36.000 0.00 0.00 44.11 2.27
530 862 7.952671 AGATGTGTACTCTCTGTTCACTTTTA 58.047 34.615 0.00 0.00 44.11 1.52
531 863 8.589338 AGATGTGTACTCTCTGTTCACTTTTAT 58.411 33.333 0.00 0.00 44.11 1.40
532 864 9.856488 GATGTGTACTCTCTGTTCACTTTTATA 57.144 33.333 0.00 0.00 44.11 0.98
534 866 9.692749 TGTGTACTCTCTGTTCACTTTTATAAG 57.307 33.333 0.00 0.00 44.11 1.73
535 867 9.909644 GTGTACTCTCTGTTCACTTTTATAAGA 57.090 33.333 0.00 0.00 41.69 2.10
536 868 9.909644 TGTACTCTCTGTTCACTTTTATAAGAC 57.090 33.333 0.00 0.00 35.30 3.01
537 869 9.356433 GTACTCTCTGTTCACTTTTATAAGACC 57.644 37.037 0.00 0.00 35.30 3.85
538 870 8.196378 ACTCTCTGTTCACTTTTATAAGACCT 57.804 34.615 0.00 0.00 35.30 3.85
539 871 8.652290 ACTCTCTGTTCACTTTTATAAGACCTT 58.348 33.333 0.00 0.00 35.30 3.50
540 872 8.833231 TCTCTGTTCACTTTTATAAGACCTTG 57.167 34.615 0.00 0.00 35.30 3.61
541 873 8.647796 TCTCTGTTCACTTTTATAAGACCTTGA 58.352 33.333 0.00 0.00 35.30 3.02
542 874 9.273016 CTCTGTTCACTTTTATAAGACCTTGAA 57.727 33.333 0.00 0.00 35.30 2.69
543 875 9.273016 TCTGTTCACTTTTATAAGACCTTGAAG 57.727 33.333 0.00 0.00 35.30 3.02
544 876 9.273016 CTGTTCACTTTTATAAGACCTTGAAGA 57.727 33.333 0.00 0.00 35.30 2.87
545 877 9.793259 TGTTCACTTTTATAAGACCTTGAAGAT 57.207 29.630 0.00 0.00 35.30 2.40
558 890 8.503458 AGACCTTGAAGATATTTCAGACAATG 57.497 34.615 0.00 0.00 0.00 2.82
559 891 8.105829 AGACCTTGAAGATATTTCAGACAATGT 58.894 33.333 0.00 0.00 0.00 2.71
560 892 8.048534 ACCTTGAAGATATTTCAGACAATGTG 57.951 34.615 0.00 0.00 0.00 3.21
561 893 6.971184 CCTTGAAGATATTTCAGACAATGTGC 59.029 38.462 0.00 0.00 0.00 4.57
562 894 7.362315 CCTTGAAGATATTTCAGACAATGTGCA 60.362 37.037 0.00 0.00 0.00 4.57
563 895 7.451501 TGAAGATATTTCAGACAATGTGCAA 57.548 32.000 0.00 0.00 0.00 4.08
564 896 7.884257 TGAAGATATTTCAGACAATGTGCAAA 58.116 30.769 0.00 0.00 0.00 3.68
565 897 8.358895 TGAAGATATTTCAGACAATGTGCAAAA 58.641 29.630 0.00 0.00 0.00 2.44
566 898 8.524870 AAGATATTTCAGACAATGTGCAAAAC 57.475 30.769 0.00 0.00 0.00 2.43
567 899 7.660112 AGATATTTCAGACAATGTGCAAAACA 58.340 30.769 0.00 0.00 44.79 2.83
568 900 7.811236 AGATATTTCAGACAATGTGCAAAACAG 59.189 33.333 0.00 0.00 43.64 3.16
569 901 3.082698 TCAGACAATGTGCAAAACAGC 57.917 42.857 0.00 0.00 43.64 4.40
570 902 2.129607 CAGACAATGTGCAAAACAGCC 58.870 47.619 0.00 0.00 43.64 4.85
571 903 2.034124 AGACAATGTGCAAAACAGCCT 58.966 42.857 0.00 0.00 43.64 4.58
572 904 3.004629 CAGACAATGTGCAAAACAGCCTA 59.995 43.478 0.00 0.00 43.64 3.93
573 905 3.828451 AGACAATGTGCAAAACAGCCTAT 59.172 39.130 0.00 0.00 43.64 2.57
574 906 4.281688 AGACAATGTGCAAAACAGCCTATT 59.718 37.500 0.00 0.00 43.64 1.73
575 907 4.959723 ACAATGTGCAAAACAGCCTATTT 58.040 34.783 0.00 0.00 43.64 1.40
576 908 5.367302 ACAATGTGCAAAACAGCCTATTTT 58.633 33.333 0.00 0.00 43.64 1.82
577 909 5.236911 ACAATGTGCAAAACAGCCTATTTTG 59.763 36.000 3.83 3.83 45.68 2.44
578 910 4.662468 TGTGCAAAACAGCCTATTTTGA 57.338 36.364 12.19 0.00 45.75 2.69
579 911 5.016051 TGTGCAAAACAGCCTATTTTGAA 57.984 34.783 12.19 0.00 45.75 2.69
580 912 5.609423 TGTGCAAAACAGCCTATTTTGAAT 58.391 33.333 12.19 0.00 45.75 2.57
581 913 6.054295 TGTGCAAAACAGCCTATTTTGAATT 58.946 32.000 12.19 0.00 45.75 2.17
582 914 6.018098 TGTGCAAAACAGCCTATTTTGAATTG 60.018 34.615 12.19 4.89 45.75 2.32
583 915 6.018016 GTGCAAAACAGCCTATTTTGAATTGT 60.018 34.615 12.19 0.00 45.75 2.71
584 916 6.202570 TGCAAAACAGCCTATTTTGAATTGTC 59.797 34.615 12.19 0.00 45.75 3.18
585 917 6.424812 GCAAAACAGCCTATTTTGAATTGTCT 59.575 34.615 12.19 0.00 45.75 3.41
586 918 7.569957 GCAAAACAGCCTATTTTGAATTGTCTG 60.570 37.037 12.19 0.00 45.75 3.51
587 919 6.899393 AACAGCCTATTTTGAATTGTCTGA 57.101 33.333 1.46 0.00 0.00 3.27
588 920 6.899393 ACAGCCTATTTTGAATTGTCTGAA 57.101 33.333 1.46 0.00 0.00 3.02
589 921 7.288810 ACAGCCTATTTTGAATTGTCTGAAA 57.711 32.000 1.46 0.00 0.00 2.69
590 922 7.899973 ACAGCCTATTTTGAATTGTCTGAAAT 58.100 30.769 1.46 0.00 0.00 2.17
591 923 7.816031 ACAGCCTATTTTGAATTGTCTGAAATG 59.184 33.333 1.46 0.00 0.00 2.32
592 924 8.030692 CAGCCTATTTTGAATTGTCTGAAATGA 58.969 33.333 0.00 0.00 0.00 2.57
593 925 8.031277 AGCCTATTTTGAATTGTCTGAAATGAC 58.969 33.333 0.00 0.00 37.47 3.06
594 926 8.031277 GCCTATTTTGAATTGTCTGAAATGACT 58.969 33.333 0.00 0.00 37.79 3.41
595 927 9.918630 CCTATTTTGAATTGTCTGAAATGACTT 57.081 29.630 0.00 0.00 37.79 3.01
602 934 9.734620 TGAATTGTCTGAAATGACTTACAAAAG 57.265 29.630 0.00 0.00 37.79 2.27
604 936 9.520204 AATTGTCTGAAATGACTTACAAAAGTG 57.480 29.630 0.00 0.00 46.09 3.16
605 937 7.857734 TGTCTGAAATGACTTACAAAAGTGA 57.142 32.000 0.00 0.00 46.09 3.41
606 938 8.275015 TGTCTGAAATGACTTACAAAAGTGAA 57.725 30.769 0.00 0.00 46.09 3.18
607 939 8.181573 TGTCTGAAATGACTTACAAAAGTGAAC 58.818 33.333 0.00 0.00 46.09 3.18
608 940 7.373441 GTCTGAAATGACTTACAAAAGTGAACG 59.627 37.037 0.00 0.00 46.09 3.95
609 941 6.491394 TGAAATGACTTACAAAAGTGAACGG 58.509 36.000 0.00 0.00 46.09 4.44
610 942 6.316640 TGAAATGACTTACAAAAGTGAACGGA 59.683 34.615 0.00 0.00 46.09 4.69
611 943 5.924475 ATGACTTACAAAAGTGAACGGAG 57.076 39.130 0.00 0.00 46.09 4.63
612 944 4.124238 TGACTTACAAAAGTGAACGGAGG 58.876 43.478 0.00 0.00 46.09 4.30
613 945 3.473625 ACTTACAAAAGTGAACGGAGGG 58.526 45.455 0.00 0.00 44.40 4.30
614 946 3.135167 ACTTACAAAAGTGAACGGAGGGA 59.865 43.478 0.00 0.00 44.40 4.20
615 947 2.256117 ACAAAAGTGAACGGAGGGAG 57.744 50.000 0.00 0.00 0.00 4.30
616 948 1.489230 ACAAAAGTGAACGGAGGGAGT 59.511 47.619 0.00 0.00 0.00 3.85
617 949 2.701951 ACAAAAGTGAACGGAGGGAGTA 59.298 45.455 0.00 0.00 0.00 2.59
618 950 3.244112 ACAAAAGTGAACGGAGGGAGTAG 60.244 47.826 0.00 0.00 0.00 2.57
619 951 0.896226 AAGTGAACGGAGGGAGTAGC 59.104 55.000 0.00 0.00 0.00 3.58
620 952 0.251653 AGTGAACGGAGGGAGTAGCA 60.252 55.000 0.00 0.00 0.00 3.49
621 953 0.824759 GTGAACGGAGGGAGTAGCAT 59.175 55.000 0.00 0.00 0.00 3.79
622 954 2.029623 GTGAACGGAGGGAGTAGCATA 58.970 52.381 0.00 0.00 0.00 3.14
623 955 2.034812 GTGAACGGAGGGAGTAGCATAG 59.965 54.545 0.00 0.00 0.00 2.23
624 956 2.092049 TGAACGGAGGGAGTAGCATAGA 60.092 50.000 0.00 0.00 0.00 1.98
625 957 1.984066 ACGGAGGGAGTAGCATAGAC 58.016 55.000 0.00 0.00 0.00 2.59
626 958 1.214673 ACGGAGGGAGTAGCATAGACA 59.785 52.381 0.00 0.00 0.00 3.41
634 966 7.284489 GGAGGGAGTAGCATAGACAATAGATAG 59.716 44.444 0.00 0.00 0.00 2.08
636 968 6.893005 GGGAGTAGCATAGACAATAGATAGGT 59.107 42.308 0.00 0.00 0.00 3.08
664 1021 1.514811 GTTCGAGATTCAGATCGTGCG 59.485 52.381 0.00 0.00 39.86 5.34
665 1022 1.014352 TCGAGATTCAGATCGTGCGA 58.986 50.000 0.00 0.00 39.86 5.10
666 1023 1.003438 TCGAGATTCAGATCGTGCGAG 60.003 52.381 0.00 0.00 39.86 5.03
667 1024 1.127701 GAGATTCAGATCGTGCGAGC 58.872 55.000 1.28 1.28 37.37 5.03
668 1025 0.593518 AGATTCAGATCGTGCGAGCG 60.594 55.000 4.20 0.58 37.37 5.03
669 1026 0.592500 GATTCAGATCGTGCGAGCGA 60.593 55.000 4.20 4.36 45.32 4.93
670 1027 0.593518 ATTCAGATCGTGCGAGCGAG 60.594 55.000 4.20 2.15 44.43 5.03
671 1028 3.318555 CAGATCGTGCGAGCGAGC 61.319 66.667 8.81 8.81 46.13 5.03
673 1030 4.888741 GATCGTGCGAGCGAGCGA 62.889 66.667 10.42 10.42 44.43 4.93
674 1031 4.896028 ATCGTGCGAGCGAGCGAG 62.896 66.667 12.69 0.00 44.43 5.03
679 1036 4.202196 GCGAGCGAGCGAGCAAAG 62.202 66.667 9.01 1.42 40.15 2.77
680 1037 4.202196 CGAGCGAGCGAGCAAAGC 62.202 66.667 9.01 0.00 40.15 3.51
681 1038 3.114616 GAGCGAGCGAGCAAAGCA 61.115 61.111 9.01 0.00 40.15 3.91
682 1039 3.081159 GAGCGAGCGAGCAAAGCAG 62.081 63.158 9.01 0.00 40.15 4.24
683 1040 4.157958 GCGAGCGAGCAAAGCAGG 62.158 66.667 0.00 0.00 37.01 4.85
684 1041 2.740055 CGAGCGAGCAAAGCAGGT 60.740 61.111 0.00 0.00 37.01 4.00
685 1042 2.866028 GAGCGAGCAAAGCAGGTG 59.134 61.111 0.00 0.00 37.01 4.00
686 1043 3.319926 GAGCGAGCAAAGCAGGTGC 62.320 63.158 0.00 0.00 42.55 5.01
687 1044 3.663176 GCGAGCAAAGCAGGTGCA 61.663 61.111 4.48 0.00 44.74 4.57
688 1045 2.986306 GCGAGCAAAGCAGGTGCAT 61.986 57.895 4.48 0.00 44.74 3.96
689 1046 1.136147 CGAGCAAAGCAGGTGCATC 59.864 57.895 4.48 0.00 44.74 3.91
690 1047 1.136147 GAGCAAAGCAGGTGCATCG 59.864 57.895 4.48 0.00 44.74 3.84
691 1048 2.505557 GCAAAGCAGGTGCATCGC 60.506 61.111 4.48 5.78 45.16 4.58
697 1054 2.879070 GCAGGTGCATCGCATCGAG 61.879 63.158 8.59 0.00 45.38 4.04
729 1086 0.955428 CACATTCCACCACCTCACCG 60.955 60.000 0.00 0.00 0.00 4.94
755 1112 4.083862 GTCCCCGACCAGCTCCAC 62.084 72.222 0.00 0.00 0.00 4.02
774 1131 3.369052 CCACTATTTTACCGCTCAGACCA 60.369 47.826 0.00 0.00 0.00 4.02
776 1133 3.767673 ACTATTTTACCGCTCAGACCAGA 59.232 43.478 0.00 0.00 0.00 3.86
803 1170 2.046892 CCCCAACGCTCAGACCAG 60.047 66.667 0.00 0.00 0.00 4.00
806 1173 2.031012 CAACGCTCAGACCAGCCA 59.969 61.111 0.00 0.00 35.84 4.75
807 1174 2.031516 CAACGCTCAGACCAGCCAG 61.032 63.158 0.00 0.00 35.84 4.85
808 1175 2.210013 AACGCTCAGACCAGCCAGA 61.210 57.895 0.00 0.00 35.84 3.86
809 1176 2.164865 AACGCTCAGACCAGCCAGAG 62.165 60.000 0.00 0.00 35.84 3.35
810 1177 2.346541 CGCTCAGACCAGCCAGAGA 61.347 63.158 0.00 0.00 35.84 3.10
811 1178 1.217779 GCTCAGACCAGCCAGAGAC 59.782 63.158 0.00 0.00 32.76 3.36
814 1181 2.118513 AGACCAGCCAGAGACCGT 59.881 61.111 0.00 0.00 0.00 4.83
867 1274 3.691744 CTCTCACCTCGCCGCTCAC 62.692 68.421 0.00 0.00 0.00 3.51
890 1297 1.648720 CAACCAGAAGCACACACGG 59.351 57.895 0.00 0.00 0.00 4.94
892 1299 3.357079 CCAGAAGCACACACGGCC 61.357 66.667 0.00 0.00 0.00 6.13
940 1347 4.742201 GCACAGCGCGAGGAGGAA 62.742 66.667 12.10 0.00 0.00 3.36
947 1354 1.513158 CGCGAGGAGGAACATGTCT 59.487 57.895 0.00 0.00 0.00 3.41
957 1364 0.310543 GAACATGTCTGTGGCGCAAA 59.689 50.000 10.83 0.00 35.22 3.68
972 1379 0.174162 GCAAACCTAGCTGCCCATTG 59.826 55.000 0.00 0.00 32.18 2.82
977 1384 1.160329 CCTAGCTGCCCATTGCGTAC 61.160 60.000 0.00 0.00 45.60 3.67
1069 1482 2.685380 CGCCCAAGACCTCCTCCT 60.685 66.667 0.00 0.00 0.00 3.69
1072 1485 1.690985 CCCAAGACCTCCTCCTCCC 60.691 68.421 0.00 0.00 0.00 4.30
1073 1486 2.060980 CCAAGACCTCCTCCTCCCG 61.061 68.421 0.00 0.00 0.00 5.14
1076 1489 2.683933 GACCTCCTCCTCCCGCAA 60.684 66.667 0.00 0.00 0.00 4.85
1592 2062 4.773117 GTCGTCGGACGGCTCCAC 62.773 72.222 26.24 14.71 43.82 4.02
1595 2065 3.998672 GTCGGACGGCTCCACCAA 61.999 66.667 0.00 0.00 39.03 3.67
1701 2174 3.726517 CACGCCAAGCCCAAGTCG 61.727 66.667 0.00 0.00 0.00 4.18
1716 2189 1.062206 GTCGTACTTCTCCGGCTCG 59.938 63.158 0.00 0.00 0.00 5.03
2049 2522 3.003173 TCCAAGAGGGACTGCGGG 61.003 66.667 0.00 0.00 42.15 6.13
2181 2657 1.544537 GCCCAAAATCCACCCAAAACC 60.545 52.381 0.00 0.00 0.00 3.27
2182 2658 1.771255 CCCAAAATCCACCCAAAACCA 59.229 47.619 0.00 0.00 0.00 3.67
2183 2659 2.173569 CCCAAAATCCACCCAAAACCAA 59.826 45.455 0.00 0.00 0.00 3.67
2184 2660 3.372025 CCCAAAATCCACCCAAAACCAAA 60.372 43.478 0.00 0.00 0.00 3.28
2185 2661 3.629855 CCAAAATCCACCCAAAACCAAAC 59.370 43.478 0.00 0.00 0.00 2.93
2187 2663 1.429930 ATCCACCCAAAACCAAACCC 58.570 50.000 0.00 0.00 0.00 4.11
2188 2664 0.042731 TCCACCCAAAACCAAACCCA 59.957 50.000 0.00 0.00 0.00 4.51
2189 2665 0.179234 CCACCCAAAACCAAACCCAC 59.821 55.000 0.00 0.00 0.00 4.61
2190 2666 0.905357 CACCCAAAACCAAACCCACA 59.095 50.000 0.00 0.00 0.00 4.17
2192 2668 2.092699 CACCCAAAACCAAACCCACATT 60.093 45.455 0.00 0.00 0.00 2.71
2193 2669 2.578480 ACCCAAAACCAAACCCACATTT 59.422 40.909 0.00 0.00 0.00 2.32
2195 2671 3.370953 CCCAAAACCAAACCCACATTTCA 60.371 43.478 0.00 0.00 0.00 2.69
2196 2672 4.265073 CCAAAACCAAACCCACATTTCAA 58.735 39.130 0.00 0.00 0.00 2.69
2197 2673 4.335037 CCAAAACCAAACCCACATTTCAAG 59.665 41.667 0.00 0.00 0.00 3.02
2199 2675 2.114616 ACCAAACCCACATTTCAAGCA 58.885 42.857 0.00 0.00 0.00 3.91
2200 2676 2.158971 ACCAAACCCACATTTCAAGCAC 60.159 45.455 0.00 0.00 0.00 4.40
2211 2701 2.673775 TTCAAGCACATTTCCCTCCA 57.326 45.000 0.00 0.00 0.00 3.86
2216 2706 2.962859 AGCACATTTCCCTCCAGTTTT 58.037 42.857 0.00 0.00 0.00 2.43
2218 2708 4.479158 AGCACATTTCCCTCCAGTTTTAA 58.521 39.130 0.00 0.00 0.00 1.52
2221 2711 6.043127 AGCACATTTCCCTCCAGTTTTAATTT 59.957 34.615 0.00 0.00 0.00 1.82
2222 2712 6.368791 GCACATTTCCCTCCAGTTTTAATTTC 59.631 38.462 0.00 0.00 0.00 2.17
2226 2716 9.208022 CATTTCCCTCCAGTTTTAATTTCTTTC 57.792 33.333 0.00 0.00 0.00 2.62
2227 2717 7.906199 TTCCCTCCAGTTTTAATTTCTTTCA 57.094 32.000 0.00 0.00 0.00 2.69
2228 2718 7.906199 TCCCTCCAGTTTTAATTTCTTTCAA 57.094 32.000 0.00 0.00 0.00 2.69
2229 2719 7.951591 TCCCTCCAGTTTTAATTTCTTTCAAG 58.048 34.615 0.00 0.00 0.00 3.02
2232 2722 7.169813 CCTCCAGTTTTAATTTCTTTCAAGCAC 59.830 37.037 0.00 0.00 0.00 4.40
2233 2723 7.781056 TCCAGTTTTAATTTCTTTCAAGCACT 58.219 30.769 0.00 0.00 0.00 4.40
2234 2724 8.908903 TCCAGTTTTAATTTCTTTCAAGCACTA 58.091 29.630 0.00 0.00 0.00 2.74
2235 2725 9.696917 CCAGTTTTAATTTCTTTCAAGCACTAT 57.303 29.630 0.00 0.00 0.00 2.12
2243 2733 9.941664 AATTTCTTTCAAGCACTATAATCATCG 57.058 29.630 0.00 0.00 0.00 3.84
2264 2754 1.987770 TCGTCGCGTTAGACAAAATCC 59.012 47.619 5.77 0.00 40.98 3.01
2268 2758 2.664568 TCGCGTTAGACAAAATCCGAAG 59.335 45.455 5.77 0.00 0.00 3.79
2309 2800 3.407657 CGACGCGGAGTAGTAGCT 58.592 61.111 12.47 0.00 0.00 3.32
2310 2801 1.011019 CGACGCGGAGTAGTAGCTG 60.011 63.158 12.47 0.00 0.00 4.24
2313 2804 0.675837 ACGCGGAGTAGTAGCTGACA 60.676 55.000 12.47 0.00 0.00 3.58
2314 2805 0.450583 CGCGGAGTAGTAGCTGACAA 59.549 55.000 0.00 0.00 0.00 3.18
2315 2806 1.532090 CGCGGAGTAGTAGCTGACAAG 60.532 57.143 0.00 0.00 0.00 3.16
2316 2807 1.473278 GCGGAGTAGTAGCTGACAAGT 59.527 52.381 0.00 0.00 0.00 3.16
2317 2808 2.732597 GCGGAGTAGTAGCTGACAAGTG 60.733 54.545 0.00 0.00 0.00 3.16
2318 2809 2.159366 CGGAGTAGTAGCTGACAAGTGG 60.159 54.545 0.00 0.00 0.00 4.00
2319 2810 2.826725 GGAGTAGTAGCTGACAAGTGGT 59.173 50.000 0.00 0.00 0.00 4.16
2320 2811 3.367498 GGAGTAGTAGCTGACAAGTGGTG 60.367 52.174 0.00 0.00 0.00 4.17
2321 2812 2.563179 AGTAGTAGCTGACAAGTGGTGG 59.437 50.000 0.00 0.00 0.00 4.61
2322 2813 1.424638 AGTAGCTGACAAGTGGTGGT 58.575 50.000 0.00 0.00 0.00 4.16
2326 2817 2.047061 AGCTGACAAGTGGTGGTTAGA 58.953 47.619 0.00 0.00 0.00 2.10
2330 2821 2.039746 TGACAAGTGGTGGTTAGATGGG 59.960 50.000 0.00 0.00 0.00 4.00
2354 2849 1.368641 TCAAATCAATCAGTCGCCGG 58.631 50.000 0.00 0.00 0.00 6.13
2412 2912 1.081840 GAACGCAGCACCAGAAAGC 60.082 57.895 0.00 0.00 0.00 3.51
2417 2917 1.986575 GCAGCACCAGAAAGCGATCC 61.987 60.000 0.00 0.00 35.48 3.36
2508 3028 8.598041 ACAGATAAATACAGAGGTGAAAAGAGT 58.402 33.333 0.00 0.00 0.00 3.24
2510 3030 8.043710 AGATAAATACAGAGGTGAAAAGAGTGG 58.956 37.037 0.00 0.00 0.00 4.00
2511 3031 2.262423 ACAGAGGTGAAAAGAGTGGC 57.738 50.000 0.00 0.00 0.00 5.01
2512 3032 1.202818 ACAGAGGTGAAAAGAGTGGCC 60.203 52.381 0.00 0.00 0.00 5.36
2513 3033 1.072965 CAGAGGTGAAAAGAGTGGCCT 59.927 52.381 3.32 0.00 0.00 5.19
2514 3034 1.777272 AGAGGTGAAAAGAGTGGCCTT 59.223 47.619 3.32 0.00 0.00 4.35
2516 3036 2.959030 GAGGTGAAAAGAGTGGCCTTTT 59.041 45.455 3.32 1.54 45.81 2.27
2562 3118 4.742201 CCACCCCTCTCACGCACG 62.742 72.222 0.00 0.00 0.00 5.34
2576 3132 1.520133 CGCACGCGTGTCTTTGTTTG 61.520 55.000 36.80 11.28 34.35 2.93
2809 3396 6.181908 TCAAAAATTATTACCGGTAGTGGCT 58.818 36.000 19.12 1.11 0.00 4.75
2810 3397 6.094325 TCAAAAATTATTACCGGTAGTGGCTG 59.906 38.462 19.12 8.75 0.00 4.85
2873 3460 1.065928 CTACTAGCCGTTGGAGCCG 59.934 63.158 0.00 0.00 0.00 5.52
2902 3489 0.040067 GAAGCCTTGACCGTTGCTTG 60.040 55.000 0.00 0.00 43.63 4.01
2951 3538 4.035208 GCGAGGAGAGTTTGAAACTTTGAA 59.965 41.667 12.37 0.00 43.03 2.69
2958 3545 8.595533 GGAGAGTTTGAAACTTTGAATTGAAAC 58.404 33.333 12.37 0.00 43.03 2.78
2963 3550 9.670719 GTTTGAAACTTTGAATTGAAACCAAAA 57.329 25.926 0.00 0.00 30.56 2.44
2971 3558 5.426504 TGAATTGAAACCAAAACATGTGCT 58.573 33.333 0.00 0.00 0.00 4.40
2981 3568 0.036952 AACATGTGCTACTGCTCGCT 60.037 50.000 0.00 0.00 40.48 4.93
3048 3635 2.905415 TGCTTGGATTGATGGGAGTT 57.095 45.000 0.00 0.00 0.00 3.01
3053 3640 6.430864 TGCTTGGATTGATGGGAGTTATAAA 58.569 36.000 0.00 0.00 0.00 1.40
3078 3665 0.535102 AAGGCTGACGGACTGTTTGG 60.535 55.000 0.00 0.00 30.75 3.28
3079 3666 1.227853 GGCTGACGGACTGTTTGGT 60.228 57.895 0.00 0.00 0.00 3.67
3080 3667 1.507141 GGCTGACGGACTGTTTGGTG 61.507 60.000 0.00 0.00 0.00 4.17
3244 3831 1.074872 GCCTCGTACGTGCTAACCAC 61.075 60.000 16.05 0.00 41.15 4.16
3245 3832 0.457337 CCTCGTACGTGCTAACCACC 60.457 60.000 16.05 0.00 41.53 4.61
3249 3836 0.108472 GTACGTGCTAACCACCCTCC 60.108 60.000 0.00 0.00 41.53 4.30
3250 3837 1.597797 TACGTGCTAACCACCCTCCG 61.598 60.000 0.00 0.00 41.53 4.63
3251 3838 2.642254 CGTGCTAACCACCCTCCGA 61.642 63.158 0.00 0.00 41.53 4.55
3265 3865 0.390472 CTCCGAGTCCCAAGTTCAGC 60.390 60.000 0.00 0.00 0.00 4.26
3266 3866 0.832135 TCCGAGTCCCAAGTTCAGCT 60.832 55.000 0.00 0.00 0.00 4.24
3270 3870 3.600388 CGAGTCCCAAGTTCAGCTATTT 58.400 45.455 0.00 0.00 0.00 1.40
3324 3924 2.350895 CAGGTGGATGAACGGGCA 59.649 61.111 0.00 0.00 0.00 5.36
3414 4014 1.975327 CCTCAAGAAGGTCGAGGCA 59.025 57.895 0.00 0.00 39.95 4.75
3441 4041 2.208074 GTCATTCTGCGACGATCCG 58.792 57.895 0.00 0.00 0.00 4.18
3483 4083 0.254178 TCAAGAAGATGCAGGCCCTC 59.746 55.000 0.00 0.00 0.00 4.30
3512 4112 2.633481 AGTAAGCCGTTCTCTTCCTGTT 59.367 45.455 0.00 0.00 0.00 3.16
3514 4114 0.321996 AGCCGTTCTCTTCCTGTTCC 59.678 55.000 0.00 0.00 0.00 3.62
3515 4115 0.321996 GCCGTTCTCTTCCTGTTCCT 59.678 55.000 0.00 0.00 0.00 3.36
3516 4116 1.941668 GCCGTTCTCTTCCTGTTCCTG 60.942 57.143 0.00 0.00 0.00 3.86
3545 4145 6.810911 TCATCTTCTTCTACCTATGAGCAAC 58.189 40.000 0.00 0.00 0.00 4.17
3548 4148 5.127845 TCTTCTTCTACCTATGAGCAACTGG 59.872 44.000 0.00 0.00 0.00 4.00
3557 4157 2.670934 AGCAACTGGCCAGCTTCG 60.671 61.111 33.06 18.63 46.50 3.79
3558 4158 3.741476 GCAACTGGCCAGCTTCGG 61.741 66.667 33.06 17.68 36.11 4.30
3571 4175 1.079266 CTTCGGCTCTCTGCTTGCT 60.079 57.895 0.00 0.00 42.39 3.91
3575 4179 1.299321 GGCTCTCTGCTTGCTCCTT 59.701 57.895 0.00 0.00 42.39 3.36
3576 4180 1.025647 GGCTCTCTGCTTGCTCCTTG 61.026 60.000 0.00 0.00 42.39 3.61
3577 4181 0.321475 GCTCTCTGCTTGCTCCTTGT 60.321 55.000 0.00 0.00 38.95 3.16
3578 4182 1.440708 CTCTCTGCTTGCTCCTTGTG 58.559 55.000 0.00 0.00 0.00 3.33
3579 4183 0.604780 TCTCTGCTTGCTCCTTGTGC 60.605 55.000 0.00 0.00 0.00 4.57
3597 4203 3.441222 TGTGCTCATCATTCATGGTTGTC 59.559 43.478 0.00 0.00 32.64 3.18
3663 4269 3.199891 GCCATGAACCGGTACCGC 61.200 66.667 29.15 15.81 38.24 5.68
3750 4356 5.774498 TCTAGTAGCACATGACATACAGG 57.226 43.478 0.00 0.00 36.29 4.00
3759 4365 3.753272 ACATGACATACAGGCAAACAGAC 59.247 43.478 0.00 0.00 39.98 3.51
3768 4374 3.006110 ACAGGCAAACAGACCAATCATTG 59.994 43.478 0.00 0.00 0.00 2.82
3907 4513 2.288640 GCACCAAGAAGCTGCTGATTTT 60.289 45.455 1.35 0.00 0.00 1.82
3912 4518 0.242017 GAAGCTGCTGATTTTGGCGT 59.758 50.000 1.35 0.00 0.00 5.68
3966 4573 7.388290 TCGAATGTAGTGAATTTGTTTTTGC 57.612 32.000 0.00 0.00 0.00 3.68
4045 4652 5.107104 GCAAATCTGAACACACTGATCGTAA 60.107 40.000 0.00 0.00 0.00 3.18
4047 4654 7.521529 CAAATCTGAACACACTGATCGTAATT 58.478 34.615 0.00 0.00 0.00 1.40
4055 4662 4.864806 CACACTGATCGTAATTGTGCTAGT 59.135 41.667 0.00 0.00 31.84 2.57
4105 4713 4.923281 CCAGAGGAAATTAAACAAAAGGCG 59.077 41.667 0.00 0.00 0.00 5.52
4120 4728 1.477553 AGGCGAACAAATGGCATCAT 58.522 45.000 0.00 0.00 33.85 2.45
4178 4787 6.534475 TCTTTATGCAGCAGATGGATTTTT 57.466 33.333 0.00 0.00 40.87 1.94
4187 4796 6.072783 GCAGCAGATGGATTTTTAGTAGGATC 60.073 42.308 0.00 0.00 0.00 3.36
4214 4823 9.507329 GAATATTTTGAGTTGATCCTGGCTATA 57.493 33.333 0.00 0.00 0.00 1.31
4215 4824 8.854614 ATATTTTGAGTTGATCCTGGCTATAC 57.145 34.615 0.00 0.00 0.00 1.47
4342 4978 6.313519 TCTTAAACTAGGCAATGATCCTGT 57.686 37.500 0.00 0.00 35.21 4.00
4356 4992 1.032014 TCCTGTTCTGCAACTTTGGC 58.968 50.000 0.00 0.00 33.17 4.52
4472 5108 5.128827 ACAGTCACCACTAGTTTCTCTGAAA 59.871 40.000 14.52 0.00 0.00 2.69
4501 5139 3.316308 GCATTCCAGTGACAAGTTGAGTT 59.684 43.478 10.54 0.00 0.00 3.01
4516 5154 5.005740 AGTTGAGTTTTGATGCTGCAGATA 58.994 37.500 20.43 5.62 0.00 1.98
4522 5160 7.874016 TGAGTTTTGATGCTGCAGATAAAAATT 59.126 29.630 20.43 15.04 0.00 1.82
4636 5274 2.346365 GGAGTCCGGTTCGCCTTT 59.654 61.111 0.00 0.00 34.30 3.11
4642 5280 0.245539 TCCGGTTCGCCTTTAGAGTG 59.754 55.000 0.00 0.00 34.30 3.51
4659 5297 1.850289 TGCACCAGGTACACCCCAT 60.850 57.895 0.00 0.00 36.42 4.00
4671 5319 4.334481 GGTACACCCCATTTTTCTCATACG 59.666 45.833 0.00 0.00 0.00 3.06
4693 5342 3.643792 GCTCACTCTATCCCCATACTTGT 59.356 47.826 0.00 0.00 0.00 3.16
4694 5343 4.502259 GCTCACTCTATCCCCATACTTGTG 60.502 50.000 0.00 0.00 0.00 3.33
4697 5346 3.780294 ACTCTATCCCCATACTTGTGCAA 59.220 43.478 0.00 0.00 0.00 4.08
4701 5350 2.270858 TCCCCATACTTGTGCAAGGTA 58.729 47.619 15.31 6.75 42.53 3.08
4702 5351 2.849943 TCCCCATACTTGTGCAAGGTAT 59.150 45.455 15.31 8.39 42.53 2.73
4703 5352 3.268334 TCCCCATACTTGTGCAAGGTATT 59.732 43.478 15.31 0.00 42.53 1.89
4704 5353 4.023291 CCCCATACTTGTGCAAGGTATTT 58.977 43.478 15.31 0.00 42.53 1.40
4705 5354 5.044772 TCCCCATACTTGTGCAAGGTATTTA 60.045 40.000 15.31 0.37 42.53 1.40
4706 5355 5.654650 CCCCATACTTGTGCAAGGTATTTAA 59.345 40.000 15.31 0.00 42.53 1.52
4708 5357 7.147742 CCCCATACTTGTGCAAGGTATTTAAAT 60.148 37.037 15.31 5.89 42.53 1.40
4713 5362 8.587952 ACTTGTGCAAGGTATTTAAATTCAAC 57.412 30.769 15.31 0.00 42.53 3.18
4721 5370 7.696992 AGGTATTTAAATTCAACCATGTCGT 57.303 32.000 17.14 0.00 32.43 4.34
4726 5375 7.687005 TTTAAATTCAACCATGTCGTTTCAC 57.313 32.000 0.00 0.00 0.00 3.18
4727 5376 4.909696 AATTCAACCATGTCGTTTCACA 57.090 36.364 0.00 0.00 0.00 3.58
4864 5513 1.675801 CTGGCAGAAGCTGAGACCA 59.324 57.895 9.42 0.00 41.70 4.02
4867 5516 0.390998 GGCAGAAGCTGAGACCAGAC 60.391 60.000 0.00 0.00 43.02 3.51
4868 5517 0.390998 GCAGAAGCTGAGACCAGACC 60.391 60.000 0.00 0.00 43.02 3.85
4869 5518 1.265236 CAGAAGCTGAGACCAGACCT 58.735 55.000 0.00 0.00 43.02 3.85
4870 5519 2.451490 CAGAAGCTGAGACCAGACCTA 58.549 52.381 0.00 0.00 43.02 3.08
4872 5521 3.096092 AGAAGCTGAGACCAGACCTAAG 58.904 50.000 0.00 0.00 43.02 2.18
4873 5522 2.909504 AGCTGAGACCAGACCTAAGA 57.090 50.000 0.00 0.00 43.02 2.10
4874 5523 2.733956 AGCTGAGACCAGACCTAAGAG 58.266 52.381 0.00 0.00 43.02 2.85
4885 5534 6.313324 ACCAGACCTAAGAGTACCATATACC 58.687 44.000 0.00 0.00 0.00 2.73
4934 5583 5.871539 TGTTTCCTGTAACGAAAACACTTC 58.128 37.500 0.00 0.00 36.86 3.01
4935 5584 5.411977 TGTTTCCTGTAACGAAAACACTTCA 59.588 36.000 0.00 0.00 36.86 3.02
4936 5585 5.473796 TTCCTGTAACGAAAACACTTCAC 57.526 39.130 0.00 0.00 0.00 3.18
4937 5586 4.505808 TCCTGTAACGAAAACACTTCACA 58.494 39.130 0.00 0.00 0.00 3.58
4938 5587 4.330620 TCCTGTAACGAAAACACTTCACAC 59.669 41.667 0.00 0.00 0.00 3.82
4941 5590 6.184580 TGTAACGAAAACACTTCACACAAT 57.815 33.333 0.00 0.00 0.00 2.71
4944 5593 8.235226 TGTAACGAAAACACTTCACACAATTTA 58.765 29.630 0.00 0.00 0.00 1.40
4945 5594 9.228636 GTAACGAAAACACTTCACACAATTTAT 57.771 29.630 0.00 0.00 0.00 1.40
4946 5595 7.908193 ACGAAAACACTTCACACAATTTATC 57.092 32.000 0.00 0.00 0.00 1.75
4984 5633 4.491234 TCTTCGTTCTCACTGAAGTCTC 57.509 45.455 1.64 0.00 39.97 3.36
4991 5640 1.204467 CTCACTGAAGTCTCCCAGAGC 59.796 57.143 8.65 0.00 34.65 4.09
5010 5660 3.000727 AGCCGTGTGTTTGCTATAACTC 58.999 45.455 0.00 0.00 32.56 3.01
5096 5780 3.118261 GGGGCAGAATGAGTGAATCTACA 60.118 47.826 0.00 0.00 39.69 2.74
5164 5848 6.852853 CACGGAACATCAAGATGCATTTATAC 59.147 38.462 9.85 0.00 42.39 1.47
5209 5894 1.539388 GTTGTGATTGACCCATGCGAA 59.461 47.619 0.00 0.00 0.00 4.70
5329 6016 8.698854 GCAAAATTCGTGAAGAAATAACATTCA 58.301 29.630 0.00 0.00 42.91 2.57
5356 6043 9.932699 TGATGATTTGCACAAAATTAAACAAAG 57.067 25.926 0.00 0.00 38.64 2.77
5358 6045 9.934190 ATGATTTGCACAAAATTAAACAAAGTC 57.066 25.926 0.00 0.00 38.64 3.01
5359 6046 8.939929 TGATTTGCACAAAATTAAACAAAGTCA 58.060 25.926 0.00 0.00 38.64 3.41
5364 6051 8.821894 TGCACAAAATTAAACAAAGTCATTACC 58.178 29.630 0.00 0.00 0.00 2.85
5365 6052 8.001549 GCACAAAATTAAACAAAGTCATTACCG 58.998 33.333 0.00 0.00 0.00 4.02
5366 6053 9.026074 CACAAAATTAAACAAAGTCATTACCGT 57.974 29.630 0.00 0.00 0.00 4.83
5367 6054 9.589111 ACAAAATTAAACAAAGTCATTACCGTT 57.411 25.926 0.00 0.00 0.00 4.44
5375 6062 7.373778 ACAAAGTCATTACCGTTATTCCTTC 57.626 36.000 0.00 0.00 0.00 3.46
5378 6065 9.326413 CAAAGTCATTACCGTTATTCCTTCTAT 57.674 33.333 0.00 0.00 0.00 1.98
5404 6091 0.107831 TCGGGGTTTTCTGTGTCCAG 59.892 55.000 0.00 0.00 40.25 3.86
5419 6106 0.542938 TCCAGAGTCCAGACCACCAG 60.543 60.000 0.00 0.00 0.00 4.00
5448 6135 5.521372 GCTATTCCTTTCATGAAATGTTGCC 59.479 40.000 20.76 4.57 46.80 4.52
5485 6172 9.539825 ACACTTCAACATGTTTATTGCAAAATA 57.460 25.926 8.77 0.00 0.00 1.40
5547 6234 8.462589 AACTGGGAATGCAATTTTTACAAATT 57.537 26.923 0.00 0.00 42.37 1.82
5588 6275 2.295909 GCCAGTAGCACAATCCAAACAA 59.704 45.455 0.00 0.00 42.97 2.83
5593 6280 7.417612 CCAGTAGCACAATCCAAACAATATAC 58.582 38.462 0.00 0.00 0.00 1.47
5617 6304 8.469309 ACTTCATCCAAAATCCCTACATATTG 57.531 34.615 0.00 0.00 0.00 1.90
5618 6305 8.061304 ACTTCATCCAAAATCCCTACATATTGT 58.939 33.333 0.00 0.00 0.00 2.71
5672 6360 3.091545 TGGATTTCCAAGAGAACATGCC 58.908 45.455 0.00 0.00 44.35 4.40
5692 6380 3.552684 GCCAGTAACATGCACACATTTGT 60.553 43.478 0.00 0.00 32.87 2.83
5789 6477 2.687935 TCAAATAGATGGAAAAGGGCGC 59.312 45.455 0.00 0.00 0.00 6.53
5790 6478 2.426738 CAAATAGATGGAAAAGGGCGCA 59.573 45.455 10.83 0.00 0.00 6.09
5817 6515 5.240403 GGAACTGCTCATTATTCATCCTTCC 59.760 44.000 0.00 0.00 0.00 3.46
5846 6544 9.601217 GACCACATGGAATATGTATATTACTCC 57.399 37.037 4.53 2.48 35.15 3.85
5847 6545 8.548877 ACCACATGGAATATGTATATTACTCCC 58.451 37.037 4.53 2.20 35.15 4.30
5848 6546 8.772250 CCACATGGAATATGTATATTACTCCCT 58.228 37.037 8.01 0.00 35.15 4.20
5849 6547 9.823647 CACATGGAATATGTATATTACTCCCTC 57.176 37.037 8.01 0.00 35.15 4.30
5850 6548 9.790297 ACATGGAATATGTATATTACTCCCTCT 57.210 33.333 8.01 0.00 35.15 3.69
5852 6550 9.790297 ATGGAATATGTATATTACTCCCTCTGT 57.210 33.333 8.01 0.00 35.15 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.103911 CGCGTCCGCTTTTCGTCT 61.104 61.111 10.21 0.00 39.32 4.18
12 13 2.858807 GATTCAAACGGACGCGCGTC 62.859 60.000 45.60 45.60 43.87 5.19
13 14 3.007070 GATTCAAACGGACGCGCGT 62.007 57.895 38.52 38.52 0.00 6.01
14 15 2.275812 GATTCAAACGGACGCGCG 60.276 61.111 30.96 30.96 0.00 6.86
15 16 2.275812 CGATTCAAACGGACGCGC 60.276 61.111 5.73 0.00 0.00 6.86
16 17 1.056750 GTCGATTCAAACGGACGCG 59.943 57.895 3.53 3.53 0.00 6.01
17 18 0.719465 ATGTCGATTCAAACGGACGC 59.281 50.000 0.00 0.00 0.00 5.19
18 19 1.724623 ACATGTCGATTCAAACGGACG 59.275 47.619 0.00 0.00 0.00 4.79
19 20 3.806316 AACATGTCGATTCAAACGGAC 57.194 42.857 0.00 0.00 0.00 4.79
20 21 3.810386 TCAAACATGTCGATTCAAACGGA 59.190 39.130 0.00 0.00 0.00 4.69
21 22 4.140518 TCAAACATGTCGATTCAAACGG 57.859 40.909 0.00 0.00 0.00 4.44
22 23 4.488449 CGATCAAACATGTCGATTCAAACG 59.512 41.667 11.00 6.90 37.55 3.60
23 24 5.617609 TCGATCAAACATGTCGATTCAAAC 58.382 37.500 11.00 0.09 39.22 2.93
24 25 5.854431 TCGATCAAACATGTCGATTCAAA 57.146 34.783 11.00 0.00 39.22 2.69
49 50 0.394488 TGGGTCACCGCAGACAAAAA 60.394 50.000 7.60 0.00 40.29 1.94
50 51 0.394488 TTGGGTCACCGCAGACAAAA 60.394 50.000 7.60 0.00 40.29 2.44
51 52 0.394488 TTTGGGTCACCGCAGACAAA 60.394 50.000 7.60 0.00 40.29 2.83
52 53 1.098712 GTTTGGGTCACCGCAGACAA 61.099 55.000 7.60 0.00 40.29 3.18
53 54 1.525077 GTTTGGGTCACCGCAGACA 60.525 57.895 7.60 0.00 40.29 3.41
54 55 2.258726 GGTTTGGGTCACCGCAGAC 61.259 63.158 0.00 0.00 40.75 3.51
55 56 2.112297 GGTTTGGGTCACCGCAGA 59.888 61.111 0.00 0.00 40.75 4.26
60 61 1.862602 GCATGTCGGTTTGGGTCACC 61.863 60.000 0.00 0.00 37.24 4.02
61 62 1.579429 GCATGTCGGTTTGGGTCAC 59.421 57.895 0.00 0.00 0.00 3.67
62 63 1.963855 CGCATGTCGGTTTGGGTCA 60.964 57.895 0.00 0.00 33.78 4.02
63 64 2.867472 CGCATGTCGGTTTGGGTC 59.133 61.111 0.00 0.00 33.78 4.46
64 65 3.361977 GCGCATGTCGGTTTGGGT 61.362 61.111 0.30 0.00 38.94 4.51
65 66 3.326889 CTGCGCATGTCGGTTTGGG 62.327 63.158 12.24 0.00 38.94 4.12
66 67 2.176546 CTGCGCATGTCGGTTTGG 59.823 61.111 12.24 0.00 38.94 3.28
67 68 1.154413 GTCTGCGCATGTCGGTTTG 60.154 57.895 12.24 0.00 38.94 2.93
68 69 2.667318 CGTCTGCGCATGTCGGTTT 61.667 57.895 12.24 0.00 38.94 3.27
69 70 3.112075 CGTCTGCGCATGTCGGTT 61.112 61.111 12.24 0.00 38.94 4.44
70 71 3.567478 TTCGTCTGCGCATGTCGGT 62.567 57.895 12.24 0.00 38.94 4.69
71 72 2.379634 TTTCGTCTGCGCATGTCGG 61.380 57.895 12.24 0.00 38.94 4.79
72 73 1.225475 GTTTCGTCTGCGCATGTCG 60.225 57.895 12.24 16.18 42.12 4.35
73 74 1.225475 CGTTTCGTCTGCGCATGTC 60.225 57.895 12.24 3.32 38.14 3.06
74 75 2.667318 CCGTTTCGTCTGCGCATGT 61.667 57.895 12.24 0.00 38.14 3.21
75 76 2.096406 CCGTTTCGTCTGCGCATG 59.904 61.111 12.24 5.41 38.14 4.06
76 77 3.118454 CCCGTTTCGTCTGCGCAT 61.118 61.111 12.24 0.00 38.14 4.73
77 78 4.595538 ACCCGTTTCGTCTGCGCA 62.596 61.111 10.98 10.98 38.14 6.09
78 79 3.774702 GACCCGTTTCGTCTGCGC 61.775 66.667 0.00 0.00 38.14 6.09
79 80 2.355363 TGACCCGTTTCGTCTGCG 60.355 61.111 0.00 0.00 39.92 5.18
80 81 2.668280 GCTGACCCGTTTCGTCTGC 61.668 63.158 4.44 4.44 44.41 4.26
81 82 1.300620 TGCTGACCCGTTTCGTCTG 60.301 57.895 0.00 0.00 33.64 3.51
82 83 1.300697 GTGCTGACCCGTTTCGTCT 60.301 57.895 0.00 0.00 0.00 4.18
83 84 0.949105 ATGTGCTGACCCGTTTCGTC 60.949 55.000 0.00 0.00 0.00 4.20
84 85 0.534203 AATGTGCTGACCCGTTTCGT 60.534 50.000 0.00 0.00 0.00 3.85
85 86 0.110238 CAATGTGCTGACCCGTTTCG 60.110 55.000 0.00 0.00 0.00 3.46
86 87 1.069227 GTCAATGTGCTGACCCGTTTC 60.069 52.381 0.00 0.00 39.93 2.78
87 88 0.951558 GTCAATGTGCTGACCCGTTT 59.048 50.000 0.00 0.00 39.93 3.60
88 89 1.227999 CGTCAATGTGCTGACCCGTT 61.228 55.000 0.00 0.00 42.34 4.44
89 90 1.667830 CGTCAATGTGCTGACCCGT 60.668 57.895 0.00 0.00 42.34 5.28
90 91 1.227999 AACGTCAATGTGCTGACCCG 61.228 55.000 0.00 0.00 42.34 5.28
91 92 0.238289 CAACGTCAATGTGCTGACCC 59.762 55.000 0.00 0.00 42.34 4.46
92 93 0.385974 GCAACGTCAATGTGCTGACC 60.386 55.000 1.95 0.00 42.34 4.02
93 94 0.588252 AGCAACGTCAATGTGCTGAC 59.412 50.000 10.74 0.00 41.98 3.51
94 95 0.867746 GAGCAACGTCAATGTGCTGA 59.132 50.000 15.95 0.00 35.83 4.26
95 96 0.870393 AGAGCAACGTCAATGTGCTG 59.130 50.000 15.95 0.00 35.83 4.41
96 97 1.597742 AAGAGCAACGTCAATGTGCT 58.402 45.000 11.30 11.30 38.68 4.40
97 98 3.747099 ATAAGAGCAACGTCAATGTGC 57.253 42.857 0.86 0.86 0.00 4.57
98 99 6.349973 ACATATAAGAGCAACGTCAATGTG 57.650 37.500 0.00 0.00 0.00 3.21
99 100 6.183360 CCAACATATAAGAGCAACGTCAATGT 60.183 38.462 0.00 0.00 0.00 2.71
100 101 6.037062 TCCAACATATAAGAGCAACGTCAATG 59.963 38.462 0.00 0.00 0.00 2.82
101 102 6.112734 TCCAACATATAAGAGCAACGTCAAT 58.887 36.000 0.00 0.00 0.00 2.57
102 103 5.483811 TCCAACATATAAGAGCAACGTCAA 58.516 37.500 0.00 0.00 0.00 3.18
103 104 5.079689 TCCAACATATAAGAGCAACGTCA 57.920 39.130 0.00 0.00 0.00 4.35
104 105 5.523916 ACATCCAACATATAAGAGCAACGTC 59.476 40.000 0.00 0.00 0.00 4.34
105 106 5.428253 ACATCCAACATATAAGAGCAACGT 58.572 37.500 0.00 0.00 0.00 3.99
106 107 5.991328 ACATCCAACATATAAGAGCAACG 57.009 39.130 0.00 0.00 0.00 4.10
107 108 9.669353 CATTTACATCCAACATATAAGAGCAAC 57.331 33.333 0.00 0.00 0.00 4.17
108 109 8.352201 GCATTTACATCCAACATATAAGAGCAA 58.648 33.333 0.00 0.00 0.00 3.91
109 110 7.501892 TGCATTTACATCCAACATATAAGAGCA 59.498 33.333 0.00 0.00 0.00 4.26
110 111 7.874940 TGCATTTACATCCAACATATAAGAGC 58.125 34.615 0.00 0.00 0.00 4.09
112 113 8.720562 CGATGCATTTACATCCAACATATAAGA 58.279 33.333 0.00 0.00 42.91 2.10
113 114 7.482743 GCGATGCATTTACATCCAACATATAAG 59.517 37.037 0.00 0.00 42.91 1.73
114 115 7.040823 TGCGATGCATTTACATCCAACATATAA 60.041 33.333 0.00 0.00 42.91 0.98
115 116 6.429385 TGCGATGCATTTACATCCAACATATA 59.571 34.615 0.00 0.00 42.91 0.86
116 117 5.241285 TGCGATGCATTTACATCCAACATAT 59.759 36.000 0.00 0.00 42.91 1.78
117 118 4.578105 TGCGATGCATTTACATCCAACATA 59.422 37.500 0.00 0.00 42.91 2.29
118 119 3.380954 TGCGATGCATTTACATCCAACAT 59.619 39.130 0.00 0.00 42.91 2.71
119 120 2.751806 TGCGATGCATTTACATCCAACA 59.248 40.909 0.00 0.00 42.91 3.33
120 121 3.419264 TGCGATGCATTTACATCCAAC 57.581 42.857 0.00 0.00 42.91 3.77
133 134 2.660552 GCCCATGCAATGCGATGC 60.661 61.111 0.00 6.59 44.97 3.91
134 135 2.028484 GGCCCATGCAATGCGATG 59.972 61.111 0.00 5.77 44.97 3.84
135 136 2.442458 TGGCCCATGCAATGCGAT 60.442 55.556 0.00 0.00 44.97 4.58
136 137 2.914756 ATCTGGCCCATGCAATGCGA 62.915 55.000 0.00 0.00 44.97 5.10
137 138 1.174078 TATCTGGCCCATGCAATGCG 61.174 55.000 0.00 0.00 44.97 4.73
138 139 0.316204 GTATCTGGCCCATGCAATGC 59.684 55.000 0.00 0.00 44.97 3.56
139 140 1.338973 GTGTATCTGGCCCATGCAATG 59.661 52.381 0.00 0.00 46.21 2.82
140 141 1.063792 TGTGTATCTGGCCCATGCAAT 60.064 47.619 0.00 0.00 40.13 3.56
141 142 0.330941 TGTGTATCTGGCCCATGCAA 59.669 50.000 0.00 0.00 40.13 4.08
142 143 0.394216 GTGTGTATCTGGCCCATGCA 60.394 55.000 0.00 0.00 40.13 3.96
143 144 1.103398 GGTGTGTATCTGGCCCATGC 61.103 60.000 0.00 0.00 0.00 4.06
144 145 0.255604 TGGTGTGTATCTGGCCCATG 59.744 55.000 0.00 0.00 0.00 3.66
145 146 0.255890 GTGGTGTGTATCTGGCCCAT 59.744 55.000 0.00 0.00 0.00 4.00
146 147 0.840288 AGTGGTGTGTATCTGGCCCA 60.840 55.000 0.00 0.00 0.00 5.36
147 148 0.107654 GAGTGGTGTGTATCTGGCCC 60.108 60.000 0.00 0.00 0.00 5.80
148 149 0.460284 CGAGTGGTGTGTATCTGGCC 60.460 60.000 0.00 0.00 0.00 5.36
149 150 1.084370 GCGAGTGGTGTGTATCTGGC 61.084 60.000 0.00 0.00 0.00 4.85
150 151 0.460284 GGCGAGTGGTGTGTATCTGG 60.460 60.000 0.00 0.00 0.00 3.86
151 152 0.246360 TGGCGAGTGGTGTGTATCTG 59.754 55.000 0.00 0.00 0.00 2.90
152 153 0.973632 TTGGCGAGTGGTGTGTATCT 59.026 50.000 0.00 0.00 0.00 1.98
153 154 1.076332 GTTGGCGAGTGGTGTGTATC 58.924 55.000 0.00 0.00 0.00 2.24
154 155 0.321298 GGTTGGCGAGTGGTGTGTAT 60.321 55.000 0.00 0.00 0.00 2.29
155 156 1.070105 GGTTGGCGAGTGGTGTGTA 59.930 57.895 0.00 0.00 0.00 2.90
156 157 2.203153 GGTTGGCGAGTGGTGTGT 60.203 61.111 0.00 0.00 0.00 3.72
157 158 1.577328 GATGGTTGGCGAGTGGTGTG 61.577 60.000 0.00 0.00 0.00 3.82
158 159 1.302511 GATGGTTGGCGAGTGGTGT 60.303 57.895 0.00 0.00 0.00 4.16
197 198 1.591158 CGTAAATCCATGGGACGAACG 59.409 52.381 13.02 11.92 32.98 3.95
198 199 2.606272 GACGTAAATCCATGGGACGAAC 59.394 50.000 25.68 17.92 32.98 3.95
199 200 2.419021 GGACGTAAATCCATGGGACGAA 60.419 50.000 25.68 4.71 38.77 3.85
200 201 1.137479 GGACGTAAATCCATGGGACGA 59.863 52.381 25.68 5.05 38.77 4.20
244 245 8.800231 TTCACATCACATTAAACACTTGAATG 57.200 30.769 0.00 0.00 36.77 2.67
252 253 5.518812 GTGTGCTTCACATCACATTAAACA 58.481 37.500 2.80 0.00 46.32 2.83
386 399 8.638629 ACAGACAGAAAAGTGTAGTAGTCTAT 57.361 34.615 0.00 0.00 33.72 1.98
387 400 7.095313 CGACAGACAGAAAAGTGTAGTAGTCTA 60.095 40.741 0.00 0.00 33.72 2.59
411 743 2.365582 TCATCGGTTGATCAGTCTCGA 58.634 47.619 11.88 11.88 30.49 4.04
436 768 9.877222 TTGAGGTGTGGATTAGATTACTCTATA 57.123 33.333 0.00 0.00 33.98 1.31
443 775 5.880332 GCACTTTGAGGTGTGGATTAGATTA 59.120 40.000 0.00 0.00 39.21 1.75
445 777 4.018960 AGCACTTTGAGGTGTGGATTAGAT 60.019 41.667 0.00 0.00 39.21 1.98
447 779 3.438087 CAGCACTTTGAGGTGTGGATTAG 59.562 47.826 0.00 0.00 39.21 1.73
465 797 0.400213 ATCCCGTTTCCTCAACAGCA 59.600 50.000 0.00 0.00 34.68 4.41
514 846 8.930760 CAAGGTCTTATAAAAGTGAACAGAGAG 58.069 37.037 0.00 0.00 34.13 3.20
515 847 8.647796 TCAAGGTCTTATAAAAGTGAACAGAGA 58.352 33.333 0.00 0.00 34.13 3.10
516 848 8.833231 TCAAGGTCTTATAAAAGTGAACAGAG 57.167 34.615 0.00 0.00 34.13 3.35
517 849 9.273016 CTTCAAGGTCTTATAAAAGTGAACAGA 57.727 33.333 0.00 0.00 34.13 3.41
518 850 9.273016 TCTTCAAGGTCTTATAAAAGTGAACAG 57.727 33.333 0.00 0.00 34.13 3.16
519 851 9.793259 ATCTTCAAGGTCTTATAAAAGTGAACA 57.207 29.630 0.00 0.00 34.13 3.18
532 864 8.954350 CATTGTCTGAAATATCTTCAAGGTCTT 58.046 33.333 0.00 0.00 0.00 3.01
533 865 8.105829 ACATTGTCTGAAATATCTTCAAGGTCT 58.894 33.333 0.00 0.00 0.00 3.85
534 866 8.180267 CACATTGTCTGAAATATCTTCAAGGTC 58.820 37.037 0.00 0.00 30.13 3.85
535 867 7.362401 GCACATTGTCTGAAATATCTTCAAGGT 60.362 37.037 0.00 0.00 31.40 3.50
536 868 6.971184 GCACATTGTCTGAAATATCTTCAAGG 59.029 38.462 0.00 0.00 0.00 3.61
537 869 7.532571 TGCACATTGTCTGAAATATCTTCAAG 58.467 34.615 0.00 0.00 0.00 3.02
538 870 7.451501 TGCACATTGTCTGAAATATCTTCAA 57.548 32.000 0.00 0.00 0.00 2.69
539 871 7.451501 TTGCACATTGTCTGAAATATCTTCA 57.548 32.000 0.00 1.96 0.00 3.02
540 872 8.642020 GTTTTGCACATTGTCTGAAATATCTTC 58.358 33.333 0.00 0.00 0.00 2.87
541 873 8.143193 TGTTTTGCACATTGTCTGAAATATCTT 58.857 29.630 0.00 0.00 0.00 2.40
542 874 7.660112 TGTTTTGCACATTGTCTGAAATATCT 58.340 30.769 0.00 0.00 0.00 1.98
543 875 7.411157 GCTGTTTTGCACATTGTCTGAAATATC 60.411 37.037 0.00 0.00 33.76 1.63
544 876 6.366877 GCTGTTTTGCACATTGTCTGAAATAT 59.633 34.615 0.00 0.00 33.76 1.28
545 877 5.691305 GCTGTTTTGCACATTGTCTGAAATA 59.309 36.000 0.00 0.00 33.76 1.40
546 878 4.508861 GCTGTTTTGCACATTGTCTGAAAT 59.491 37.500 0.00 0.00 33.76 2.17
547 879 3.864583 GCTGTTTTGCACATTGTCTGAAA 59.135 39.130 0.00 0.00 33.76 2.69
548 880 3.446799 GCTGTTTTGCACATTGTCTGAA 58.553 40.909 0.00 0.00 33.76 3.02
549 881 2.223782 GGCTGTTTTGCACATTGTCTGA 60.224 45.455 0.00 0.00 33.76 3.27
550 882 2.129607 GGCTGTTTTGCACATTGTCTG 58.870 47.619 0.00 0.00 33.76 3.51
551 883 2.034124 AGGCTGTTTTGCACATTGTCT 58.966 42.857 0.00 0.00 33.76 3.41
552 884 2.514205 AGGCTGTTTTGCACATTGTC 57.486 45.000 0.00 0.00 33.76 3.18
553 885 4.605640 AATAGGCTGTTTTGCACATTGT 57.394 36.364 0.00 0.00 33.76 2.71
554 886 5.466058 TCAAAATAGGCTGTTTTGCACATTG 59.534 36.000 32.24 16.60 43.04 2.82
555 887 5.609423 TCAAAATAGGCTGTTTTGCACATT 58.391 33.333 32.24 6.77 43.04 2.71
556 888 5.212532 TCAAAATAGGCTGTTTTGCACAT 57.787 34.783 32.24 7.40 43.04 3.21
557 889 4.662468 TCAAAATAGGCTGTTTTGCACA 57.338 36.364 32.24 19.58 43.04 4.57
558 890 6.018016 ACAATTCAAAATAGGCTGTTTTGCAC 60.018 34.615 32.24 0.00 43.04 4.57
559 891 6.054295 ACAATTCAAAATAGGCTGTTTTGCA 58.946 32.000 32.24 26.41 43.04 4.08
560 892 6.424812 AGACAATTCAAAATAGGCTGTTTTGC 59.575 34.615 32.24 21.69 43.04 3.68
561 893 7.652909 TCAGACAATTCAAAATAGGCTGTTTTG 59.347 33.333 31.63 31.63 44.10 2.44
562 894 7.725251 TCAGACAATTCAAAATAGGCTGTTTT 58.275 30.769 15.20 15.20 0.00 2.43
563 895 7.288810 TCAGACAATTCAAAATAGGCTGTTT 57.711 32.000 3.12 3.12 0.00 2.83
564 896 6.899393 TCAGACAATTCAAAATAGGCTGTT 57.101 33.333 0.00 0.00 0.00 3.16
565 897 6.899393 TTCAGACAATTCAAAATAGGCTGT 57.101 33.333 0.00 0.00 0.00 4.40
566 898 8.030692 TCATTTCAGACAATTCAAAATAGGCTG 58.969 33.333 0.00 0.00 0.00 4.85
567 899 8.031277 GTCATTTCAGACAATTCAAAATAGGCT 58.969 33.333 0.00 0.00 38.40 4.58
568 900 8.031277 AGTCATTTCAGACAATTCAAAATAGGC 58.969 33.333 0.00 0.00 40.98 3.93
569 901 9.918630 AAGTCATTTCAGACAATTCAAAATAGG 57.081 29.630 0.00 0.00 40.98 2.57
576 908 9.734620 CTTTTGTAAGTCATTTCAGACAATTCA 57.265 29.630 0.00 0.00 40.98 2.57
577 909 9.736023 ACTTTTGTAAGTCATTTCAGACAATTC 57.264 29.630 0.00 0.00 40.60 2.17
578 910 9.520204 CACTTTTGTAAGTCATTTCAGACAATT 57.480 29.630 0.00 0.00 42.67 2.32
579 911 8.902806 TCACTTTTGTAAGTCATTTCAGACAAT 58.097 29.630 0.00 0.00 42.67 2.71
580 912 8.275015 TCACTTTTGTAAGTCATTTCAGACAA 57.725 30.769 0.00 0.00 42.67 3.18
581 913 7.857734 TCACTTTTGTAAGTCATTTCAGACA 57.142 32.000 0.00 0.00 42.67 3.41
582 914 7.373441 CGTTCACTTTTGTAAGTCATTTCAGAC 59.627 37.037 0.00 0.00 42.67 3.51
583 915 7.406553 CGTTCACTTTTGTAAGTCATTTCAGA 58.593 34.615 0.00 0.00 42.67 3.27
584 916 6.632834 CCGTTCACTTTTGTAAGTCATTTCAG 59.367 38.462 0.00 0.00 42.67 3.02
585 917 6.316640 TCCGTTCACTTTTGTAAGTCATTTCA 59.683 34.615 0.00 0.00 42.67 2.69
586 918 6.721321 TCCGTTCACTTTTGTAAGTCATTTC 58.279 36.000 0.00 0.00 42.67 2.17
587 919 6.238648 CCTCCGTTCACTTTTGTAAGTCATTT 60.239 38.462 0.00 0.00 42.67 2.32
588 920 5.238650 CCTCCGTTCACTTTTGTAAGTCATT 59.761 40.000 0.00 0.00 42.67 2.57
589 921 4.755123 CCTCCGTTCACTTTTGTAAGTCAT 59.245 41.667 0.00 0.00 42.67 3.06
590 922 4.124238 CCTCCGTTCACTTTTGTAAGTCA 58.876 43.478 0.00 0.00 42.67 3.41
591 923 3.497262 CCCTCCGTTCACTTTTGTAAGTC 59.503 47.826 0.00 0.00 42.67 3.01
592 924 3.135167 TCCCTCCGTTCACTTTTGTAAGT 59.865 43.478 0.00 0.00 45.40 2.24
593 925 3.735591 TCCCTCCGTTCACTTTTGTAAG 58.264 45.455 0.00 0.00 37.40 2.34
594 926 3.135167 ACTCCCTCCGTTCACTTTTGTAA 59.865 43.478 0.00 0.00 0.00 2.41
595 927 2.701951 ACTCCCTCCGTTCACTTTTGTA 59.298 45.455 0.00 0.00 0.00 2.41
596 928 1.489230 ACTCCCTCCGTTCACTTTTGT 59.511 47.619 0.00 0.00 0.00 2.83
597 929 2.256117 ACTCCCTCCGTTCACTTTTG 57.744 50.000 0.00 0.00 0.00 2.44
598 930 2.289506 GCTACTCCCTCCGTTCACTTTT 60.290 50.000 0.00 0.00 0.00 2.27
599 931 1.275573 GCTACTCCCTCCGTTCACTTT 59.724 52.381 0.00 0.00 0.00 2.66
600 932 0.896226 GCTACTCCCTCCGTTCACTT 59.104 55.000 0.00 0.00 0.00 3.16
601 933 0.251653 TGCTACTCCCTCCGTTCACT 60.252 55.000 0.00 0.00 0.00 3.41
602 934 0.824759 ATGCTACTCCCTCCGTTCAC 59.175 55.000 0.00 0.00 0.00 3.18
603 935 2.092049 TCTATGCTACTCCCTCCGTTCA 60.092 50.000 0.00 0.00 0.00 3.18
604 936 2.293955 GTCTATGCTACTCCCTCCGTTC 59.706 54.545 0.00 0.00 0.00 3.95
605 937 2.308690 GTCTATGCTACTCCCTCCGTT 58.691 52.381 0.00 0.00 0.00 4.44
606 938 1.214673 TGTCTATGCTACTCCCTCCGT 59.785 52.381 0.00 0.00 0.00 4.69
607 939 1.982660 TGTCTATGCTACTCCCTCCG 58.017 55.000 0.00 0.00 0.00 4.63
608 940 5.326069 TCTATTGTCTATGCTACTCCCTCC 58.674 45.833 0.00 0.00 0.00 4.30
609 941 7.284489 CCTATCTATTGTCTATGCTACTCCCTC 59.716 44.444 0.00 0.00 0.00 4.30
610 942 7.122715 CCTATCTATTGTCTATGCTACTCCCT 58.877 42.308 0.00 0.00 0.00 4.20
611 943 6.893005 ACCTATCTATTGTCTATGCTACTCCC 59.107 42.308 0.00 0.00 0.00 4.30
612 944 7.948034 ACCTATCTATTGTCTATGCTACTCC 57.052 40.000 0.00 0.00 0.00 3.85
634 966 8.332464 CGATCTGAATCTCGAACTATCTATACC 58.668 40.741 0.00 0.00 37.05 2.73
636 968 8.874816 CACGATCTGAATCTCGAACTATCTATA 58.125 37.037 6.19 0.00 38.24 1.31
664 1021 3.081159 CTGCTTTGCTCGCTCGCTC 62.081 63.158 0.00 0.00 0.00 5.03
665 1022 3.117171 CTGCTTTGCTCGCTCGCT 61.117 61.111 0.00 0.00 0.00 4.93
666 1023 4.157958 CCTGCTTTGCTCGCTCGC 62.158 66.667 0.00 0.00 0.00 5.03
667 1024 2.740055 ACCTGCTTTGCTCGCTCG 60.740 61.111 0.00 0.00 0.00 5.03
668 1025 2.866028 CACCTGCTTTGCTCGCTC 59.134 61.111 0.00 0.00 0.00 5.03
669 1026 3.360340 GCACCTGCTTTGCTCGCT 61.360 61.111 0.00 0.00 37.00 4.93
670 1027 2.862347 GATGCACCTGCTTTGCTCGC 62.862 60.000 0.00 0.00 40.86 5.03
671 1028 1.136147 GATGCACCTGCTTTGCTCG 59.864 57.895 0.00 0.00 40.86 5.03
672 1029 1.136147 CGATGCACCTGCTTTGCTC 59.864 57.895 0.00 2.02 40.86 4.26
673 1030 2.986306 GCGATGCACCTGCTTTGCT 61.986 57.895 15.06 0.00 46.26 3.91
674 1031 2.505557 GCGATGCACCTGCTTTGC 60.506 61.111 9.06 9.06 44.64 3.68
675 1032 0.524816 GATGCGATGCACCTGCTTTG 60.525 55.000 7.97 0.00 43.04 2.77
676 1033 1.805254 GATGCGATGCACCTGCTTT 59.195 52.632 7.97 0.00 43.04 3.51
677 1034 2.466982 CGATGCGATGCACCTGCTT 61.467 57.895 7.97 2.11 43.04 3.91
678 1035 2.893895 CGATGCGATGCACCTGCT 60.894 61.111 7.97 0.00 43.04 4.24
679 1036 2.879070 CTCGATGCGATGCACCTGC 61.879 63.158 0.00 0.00 43.04 4.85
680 1037 2.879070 GCTCGATGCGATGCACCTG 61.879 63.158 0.00 0.00 43.04 4.00
681 1038 2.587194 GCTCGATGCGATGCACCT 60.587 61.111 0.00 0.00 43.04 4.00
690 1047 3.918220 CGTTGGAGCGCTCGATGC 61.918 66.667 29.81 19.90 38.57 3.91
691 1048 2.014093 GAACGTTGGAGCGCTCGATG 62.014 60.000 29.81 25.62 34.88 3.84
697 1054 0.452784 GAATGTGAACGTTGGAGCGC 60.453 55.000 5.00 0.00 34.88 5.92
755 1112 4.113354 GTCTGGTCTGAGCGGTAAAATAG 58.887 47.826 14.73 0.00 0.00 1.73
774 1131 1.472662 CGTTGGGGAGTGAGGTGTCT 61.473 60.000 0.00 0.00 0.00 3.41
776 1133 3.148084 CGTTGGGGAGTGAGGTGT 58.852 61.111 0.00 0.00 0.00 4.16
803 1170 2.579738 GGAGGAACGGTCTCTGGC 59.420 66.667 0.00 0.00 0.00 4.85
806 1173 1.000612 GGAGGGAGGAACGGTCTCT 59.999 63.158 0.00 0.00 0.00 3.10
807 1174 2.416432 CGGAGGGAGGAACGGTCTC 61.416 68.421 0.00 0.00 0.00 3.36
808 1175 2.362632 CGGAGGGAGGAACGGTCT 60.363 66.667 0.00 0.00 0.00 3.85
809 1176 2.679287 ACGGAGGGAGGAACGGTC 60.679 66.667 0.00 0.00 0.00 4.79
810 1177 2.679287 GACGGAGGGAGGAACGGT 60.679 66.667 0.00 0.00 0.00 4.83
811 1178 3.459063 GGACGGAGGGAGGAACGG 61.459 72.222 0.00 0.00 0.00 4.44
814 1181 2.044252 CGAGGACGGAGGGAGGAA 60.044 66.667 0.00 0.00 35.72 3.36
867 1274 1.529010 TGTGCTTCTGGTTGGCAGG 60.529 57.895 0.00 0.00 36.62 4.85
903 1310 0.668706 TGCTTGCTCGCTTCACTCTC 60.669 55.000 0.00 0.00 0.00 3.20
904 1311 0.669932 CTGCTTGCTCGCTTCACTCT 60.670 55.000 0.00 0.00 0.00 3.24
940 1347 1.654220 GTTTGCGCCACAGACATGT 59.346 52.632 4.18 0.00 41.57 3.21
947 1354 1.965930 CAGCTAGGTTTGCGCCACA 60.966 57.895 4.18 0.00 35.28 4.17
957 1364 1.622607 TACGCAATGGGCAGCTAGGT 61.623 55.000 0.00 0.00 45.17 3.08
972 1379 2.508663 GGCCGTGGAAGAGTACGC 60.509 66.667 0.00 0.00 38.87 4.42
977 1384 4.796231 CGTCCGGCCGTGGAAGAG 62.796 72.222 26.12 6.69 40.44 2.85
1090 1518 3.041940 GGTGTTCTGCGACGGTGG 61.042 66.667 0.00 0.00 0.00 4.61
1425 1895 4.087892 TTCTCTGCCTGGAGCCGC 62.088 66.667 0.00 0.00 42.71 6.53
1679 2152 4.947147 TGGGCTTGGCGTGTGTCC 62.947 66.667 0.00 0.00 0.00 4.02
1701 2174 1.432657 GGACGAGCCGGAGAAGTAC 59.567 63.158 5.05 0.00 0.00 2.73
1736 2209 4.824515 AGCCGGACGAGGAGGAGG 62.825 72.222 5.05 0.00 0.00 4.30
2139 2615 2.526120 GCTTACCGCGATGAGGTGC 61.526 63.158 8.23 0.00 42.83 5.01
2181 2657 3.176552 TGTGCTTGAAATGTGGGTTTG 57.823 42.857 0.00 0.00 0.00 2.93
2182 2658 4.420522 AATGTGCTTGAAATGTGGGTTT 57.579 36.364 0.00 0.00 0.00 3.27
2183 2659 4.379652 GAAATGTGCTTGAAATGTGGGTT 58.620 39.130 0.00 0.00 0.00 4.11
2184 2660 3.244181 GGAAATGTGCTTGAAATGTGGGT 60.244 43.478 0.00 0.00 0.00 4.51
2185 2661 3.328505 GGAAATGTGCTTGAAATGTGGG 58.671 45.455 0.00 0.00 0.00 4.61
2187 2663 4.240096 GAGGGAAATGTGCTTGAAATGTG 58.760 43.478 0.00 0.00 0.00 3.21
2188 2664 3.259123 GGAGGGAAATGTGCTTGAAATGT 59.741 43.478 0.00 0.00 0.00 2.71
2189 2665 3.258872 TGGAGGGAAATGTGCTTGAAATG 59.741 43.478 0.00 0.00 0.00 2.32
2190 2666 3.509442 TGGAGGGAAATGTGCTTGAAAT 58.491 40.909 0.00 0.00 0.00 2.17
2192 2668 2.158475 ACTGGAGGGAAATGTGCTTGAA 60.158 45.455 0.00 0.00 0.00 2.69
2193 2669 1.425066 ACTGGAGGGAAATGTGCTTGA 59.575 47.619 0.00 0.00 0.00 3.02
2195 2671 2.683211 AACTGGAGGGAAATGTGCTT 57.317 45.000 0.00 0.00 0.00 3.91
2196 2672 2.683211 AAACTGGAGGGAAATGTGCT 57.317 45.000 0.00 0.00 0.00 4.40
2197 2673 4.864704 TTAAAACTGGAGGGAAATGTGC 57.135 40.909 0.00 0.00 0.00 4.57
2199 2675 7.855784 AGAAATTAAAACTGGAGGGAAATGT 57.144 32.000 0.00 0.00 0.00 2.71
2200 2676 9.208022 GAAAGAAATTAAAACTGGAGGGAAATG 57.792 33.333 0.00 0.00 0.00 2.32
2218 2708 9.113838 ACGATGATTATAGTGCTTGAAAGAAAT 57.886 29.630 0.00 0.00 0.00 2.17
2221 2711 6.417930 CGACGATGATTATAGTGCTTGAAAGA 59.582 38.462 0.00 0.00 0.00 2.52
2222 2712 6.199154 ACGACGATGATTATAGTGCTTGAAAG 59.801 38.462 0.00 0.00 0.00 2.62
2226 2716 4.087225 CGACGACGATGATTATAGTGCTTG 59.913 45.833 0.00 0.00 42.66 4.01
2227 2717 4.219802 CGACGACGATGATTATAGTGCTT 58.780 43.478 0.00 0.00 42.66 3.91
2228 2718 3.811514 CGACGACGATGATTATAGTGCT 58.188 45.455 0.00 0.00 42.66 4.40
2229 2719 2.338813 GCGACGACGATGATTATAGTGC 59.661 50.000 12.29 0.00 42.66 4.40
2232 2722 2.835883 ACGCGACGACGATGATTATAG 58.164 47.619 15.93 0.00 42.66 1.31
2233 2723 2.955607 ACGCGACGACGATGATTATA 57.044 45.000 15.93 0.00 42.66 0.98
2234 2724 2.115348 AACGCGACGACGATGATTAT 57.885 45.000 15.93 0.00 42.66 1.28
2235 2725 2.284952 TCTAACGCGACGACGATGATTA 59.715 45.455 15.93 0.00 42.66 1.75
2243 2733 2.222442 GGATTTTGTCTAACGCGACGAC 60.222 50.000 15.93 16.08 36.71 4.34
2264 2754 2.724174 GTGAAACCATTTTTCGGCTTCG 59.276 45.455 0.00 0.00 32.34 3.79
2268 2758 2.409152 TCGTGAAACCATTTTTCGGC 57.591 45.000 0.00 0.00 0.00 5.54
2305 2796 3.236047 TCTAACCACCACTTGTCAGCTA 58.764 45.455 0.00 0.00 0.00 3.32
2306 2797 2.047061 TCTAACCACCACTTGTCAGCT 58.953 47.619 0.00 0.00 0.00 4.24
2309 2800 2.039746 CCCATCTAACCACCACTTGTCA 59.960 50.000 0.00 0.00 0.00 3.58
2310 2801 2.039879 ACCCATCTAACCACCACTTGTC 59.960 50.000 0.00 0.00 0.00 3.18
2313 2804 1.354368 CCACCCATCTAACCACCACTT 59.646 52.381 0.00 0.00 0.00 3.16
2314 2805 0.991920 CCACCCATCTAACCACCACT 59.008 55.000 0.00 0.00 0.00 4.00
2315 2806 0.988832 TCCACCCATCTAACCACCAC 59.011 55.000 0.00 0.00 0.00 4.16
2316 2807 1.843851 GATCCACCCATCTAACCACCA 59.156 52.381 0.00 0.00 0.00 4.17
2317 2808 1.843851 TGATCCACCCATCTAACCACC 59.156 52.381 0.00 0.00 0.00 4.61
2318 2809 3.644966 TTGATCCACCCATCTAACCAC 57.355 47.619 0.00 0.00 0.00 4.16
2319 2810 4.229353 TGATTTGATCCACCCATCTAACCA 59.771 41.667 0.00 0.00 0.00 3.67
2320 2811 4.792068 TGATTTGATCCACCCATCTAACC 58.208 43.478 0.00 0.00 0.00 2.85
2321 2812 6.547141 TGATTGATTTGATCCACCCATCTAAC 59.453 38.462 0.00 0.00 0.00 2.34
2322 2813 6.671605 TGATTGATTTGATCCACCCATCTAA 58.328 36.000 0.00 0.00 0.00 2.10
2326 2817 4.875389 ACTGATTGATTTGATCCACCCAT 58.125 39.130 0.00 0.00 0.00 4.00
2330 2821 3.242870 GGCGACTGATTGATTTGATCCAC 60.243 47.826 0.00 0.00 0.00 4.02
2354 2849 1.312815 AGCAAAGCAACCACTCTCAC 58.687 50.000 0.00 0.00 0.00 3.51
2412 2912 2.472909 GCGCCCCAAAAGAGGATCG 61.473 63.158 0.00 0.00 42.67 3.69
2413 2913 2.472909 CGCGCCCCAAAAGAGGATC 61.473 63.158 0.00 0.00 0.00 3.36
2417 2917 1.966451 AGTTCGCGCCCCAAAAGAG 60.966 57.895 0.00 0.00 0.00 2.85
2508 3028 0.905809 AGCATGCATGGAAAAGGCCA 60.906 50.000 27.34 0.00 43.23 5.36
2510 3030 0.533491 TGAGCATGCATGGAAAAGGC 59.467 50.000 27.34 11.62 35.67 4.35
2511 3031 2.693591 AGATGAGCATGCATGGAAAAGG 59.306 45.455 27.34 0.91 0.00 3.11
2512 3032 4.386867 AAGATGAGCATGCATGGAAAAG 57.613 40.909 27.34 1.69 0.00 2.27
2513 3033 4.464951 AGAAAGATGAGCATGCATGGAAAA 59.535 37.500 27.34 0.00 0.00 2.29
2514 3034 4.021229 AGAAAGATGAGCATGCATGGAAA 58.979 39.130 27.34 0.00 0.00 3.13
2516 3036 3.211865 GAGAAAGATGAGCATGCATGGA 58.788 45.455 27.34 0.00 0.00 3.41
2517 3037 2.031944 CGAGAAAGATGAGCATGCATGG 60.032 50.000 27.34 10.03 0.00 3.66
2518 3038 2.870411 TCGAGAAAGATGAGCATGCATG 59.130 45.455 22.70 22.70 0.00 4.06
2519 3039 3.132160 CTCGAGAAAGATGAGCATGCAT 58.868 45.455 21.98 5.15 0.00 3.96
2520 3040 2.547826 CTCGAGAAAGATGAGCATGCA 58.452 47.619 21.98 0.00 0.00 3.96
2560 3116 1.365699 AGACAAACAAAGACACGCGT 58.634 45.000 5.58 5.58 0.00 6.01
2561 3117 2.101125 CAAGACAAACAAAGACACGCG 58.899 47.619 3.53 3.53 0.00 6.01
2562 3118 2.096819 TCCAAGACAAACAAAGACACGC 59.903 45.455 0.00 0.00 0.00 5.34
2589 3145 2.092861 TCGAGTTCCTCCAAAAACCACA 60.093 45.455 0.00 0.00 0.00 4.17
2590 3146 2.567985 TCGAGTTCCTCCAAAAACCAC 58.432 47.619 0.00 0.00 0.00 4.16
2591 3147 3.502123 ATCGAGTTCCTCCAAAAACCA 57.498 42.857 0.00 0.00 0.00 3.67
2598 3154 5.071370 GTCCTATCTTATCGAGTTCCTCCA 58.929 45.833 0.00 0.00 0.00 3.86
2600 3156 6.636562 TTGTCCTATCTTATCGAGTTCCTC 57.363 41.667 0.00 0.00 0.00 3.71
2601 3157 7.522399 CGAATTGTCCTATCTTATCGAGTTCCT 60.522 40.741 0.00 0.00 0.00 3.36
2603 3159 6.583050 CCGAATTGTCCTATCTTATCGAGTTC 59.417 42.308 0.00 0.00 0.00 3.01
2609 3169 5.701290 CCCAACCGAATTGTCCTATCTTATC 59.299 44.000 0.00 0.00 36.47 1.75
2610 3170 5.368523 TCCCAACCGAATTGTCCTATCTTAT 59.631 40.000 0.00 0.00 36.47 1.73
2755 3331 5.104259 AGAAAGTCTCTCTCTCTCTCTCC 57.896 47.826 0.00 0.00 0.00 3.71
2873 3460 2.116125 AAGGCTTCAGCACCACCC 59.884 61.111 0.30 0.00 44.36 4.61
2888 3475 2.252260 CGCCAAGCAACGGTCAAG 59.748 61.111 0.00 0.00 0.00 3.02
2902 3489 0.453390 CTCAAGAGGAAAATGGCGCC 59.547 55.000 22.73 22.73 0.00 6.53
2909 3496 0.670546 CGCGGCTCTCAAGAGGAAAA 60.671 55.000 9.01 0.00 42.29 2.29
2951 3538 5.984926 CAGTAGCACATGTTTTGGTTTCAAT 59.015 36.000 0.00 0.00 32.28 2.57
2958 3545 2.413239 CGAGCAGTAGCACATGTTTTGG 60.413 50.000 0.00 0.00 45.49 3.28
2963 3550 0.036952 AAGCGAGCAGTAGCACATGT 60.037 50.000 0.00 0.00 45.49 3.21
2971 3558 5.294356 TCAAGAACTTTTAAGCGAGCAGTA 58.706 37.500 0.00 0.00 0.00 2.74
3019 3606 5.278512 CCATCAATCCAAGCATGATCAAGAG 60.279 44.000 0.00 0.00 31.65 2.85
3048 3635 8.426489 ACAGTCCGTCAGCCTTAATTATTTATA 58.574 33.333 0.00 0.00 0.00 0.98
3053 3640 4.755266 ACAGTCCGTCAGCCTTAATTAT 57.245 40.909 0.00 0.00 0.00 1.28
3062 3649 0.814010 ACACCAAACAGTCCGTCAGC 60.814 55.000 0.00 0.00 0.00 4.26
3078 3665 2.003658 CTGCAACCCCACACACACAC 62.004 60.000 0.00 0.00 0.00 3.82
3079 3666 1.752310 CTGCAACCCCACACACACA 60.752 57.895 0.00 0.00 0.00 3.72
3080 3667 0.823356 ATCTGCAACCCCACACACAC 60.823 55.000 0.00 0.00 0.00 3.82
3244 3831 1.192146 TGAACTTGGGACTCGGAGGG 61.192 60.000 10.23 0.00 0.00 4.30
3245 3832 0.247736 CTGAACTTGGGACTCGGAGG 59.752 60.000 10.23 0.00 0.00 4.30
3249 3836 2.969628 ATAGCTGAACTTGGGACTCG 57.030 50.000 0.00 0.00 0.00 4.18
3250 3837 5.241728 ACAAAAATAGCTGAACTTGGGACTC 59.758 40.000 0.00 0.00 0.00 3.36
3251 3838 5.140454 ACAAAAATAGCTGAACTTGGGACT 58.860 37.500 0.00 0.00 0.00 3.85
3265 3865 6.884836 AGTCACCTAGCCCTTTACAAAAATAG 59.115 38.462 0.00 0.00 0.00 1.73
3266 3866 6.657541 CAGTCACCTAGCCCTTTACAAAAATA 59.342 38.462 0.00 0.00 0.00 1.40
3270 3870 3.649023 TCAGTCACCTAGCCCTTTACAAA 59.351 43.478 0.00 0.00 0.00 2.83
3414 4014 2.185350 CAGAATGACGCGGCCTCT 59.815 61.111 10.82 9.01 39.69 3.69
3424 4024 4.709982 CGGATCGTCGCAGAATGA 57.290 55.556 0.00 0.00 39.69 2.57
3483 4083 4.561105 AGAGAACGGCTTACTTCTCAAAG 58.439 43.478 12.16 0.00 43.35 2.77
3512 4112 5.960811 AGGTAGAAGAAGATGAATGACAGGA 59.039 40.000 0.00 0.00 0.00 3.86
3514 4114 8.637099 TCATAGGTAGAAGAAGATGAATGACAG 58.363 37.037 0.00 0.00 0.00 3.51
3515 4115 8.539117 TCATAGGTAGAAGAAGATGAATGACA 57.461 34.615 0.00 0.00 0.00 3.58
3516 4116 7.598493 GCTCATAGGTAGAAGAAGATGAATGAC 59.402 40.741 0.00 0.00 0.00 3.06
3558 4158 0.321475 ACAAGGAGCAAGCAGAGAGC 60.321 55.000 0.00 0.00 46.19 4.09
3559 4159 1.440708 CACAAGGAGCAAGCAGAGAG 58.559 55.000 0.00 0.00 0.00 3.20
3560 4160 0.604780 GCACAAGGAGCAAGCAGAGA 60.605 55.000 0.00 0.00 0.00 3.10
3561 4161 0.605860 AGCACAAGGAGCAAGCAGAG 60.606 55.000 0.00 0.00 0.00 3.35
3571 4175 3.284617 CCATGAATGATGAGCACAAGGA 58.715 45.455 0.00 0.00 33.31 3.36
3575 4179 3.423749 ACAACCATGAATGATGAGCACA 58.576 40.909 0.00 0.00 33.31 4.57
3576 4180 3.486375 CGACAACCATGAATGATGAGCAC 60.486 47.826 0.00 0.00 33.31 4.40
3577 4181 2.679336 CGACAACCATGAATGATGAGCA 59.321 45.455 0.00 0.00 33.31 4.26
3578 4182 2.032550 CCGACAACCATGAATGATGAGC 59.967 50.000 0.00 0.00 33.31 4.26
3579 4183 2.032550 GCCGACAACCATGAATGATGAG 59.967 50.000 0.00 0.00 33.31 2.90
3597 4203 3.136123 CCATGCTCCAACCTGCCG 61.136 66.667 0.00 0.00 0.00 5.69
3668 4274 0.695462 CCACTCCCATGGGATCTGGA 60.695 60.000 35.37 17.10 44.24 3.86
3907 4513 3.402110 CCATAGCATTCTCAATACGCCA 58.598 45.455 0.00 0.00 0.00 5.69
3912 4518 5.439721 ACACAAGCCATAGCATTCTCAATA 58.560 37.500 0.00 0.00 43.56 1.90
3966 4573 4.241590 TGCCACTAGTTCATGCAAAAAG 57.758 40.909 0.00 0.00 0.00 2.27
3975 4582 9.542462 GTACTATCATTATTTGCCACTAGTTCA 57.458 33.333 0.00 0.00 0.00 3.18
4068 4675 4.289238 TCCTCTGGCGGTTGTAAATAAA 57.711 40.909 0.00 0.00 0.00 1.40
4082 4689 4.923281 CGCCTTTTGTTTAATTTCCTCTGG 59.077 41.667 0.00 0.00 0.00 3.86
4120 4728 8.978472 GTATCTAGGACCAATAGTTATATGGCA 58.022 37.037 0.00 0.00 0.00 4.92
4149 4758 5.761726 TCCATCTGCTGCATAAAGAACTATG 59.238 40.000 1.31 0.00 33.20 2.23
4163 4772 6.146837 CGATCCTACTAAAAATCCATCTGCTG 59.853 42.308 0.00 0.00 0.00 4.41
4187 4796 5.297776 AGCCAGGATCAACTCAAAATATTCG 59.702 40.000 0.00 0.00 0.00 3.34
4280 4916 3.879295 GACAATGCACATGTAGCAGGTAT 59.121 43.478 21.66 11.43 46.36 2.73
4342 4978 2.949177 TCCTAGCCAAAGTTGCAGAA 57.051 45.000 0.00 0.00 0.00 3.02
4431 5067 1.657594 CTGTCACTTGCTACTCATGCG 59.342 52.381 0.00 0.00 0.00 4.73
4472 5108 4.101430 ACTTGTCACTGGAATGCCATTTTT 59.899 37.500 0.00 0.00 44.91 1.94
4485 5121 4.736793 GCATCAAAACTCAACTTGTCACTG 59.263 41.667 0.00 0.00 0.00 3.66
4486 5122 4.641989 AGCATCAAAACTCAACTTGTCACT 59.358 37.500 0.00 0.00 0.00 3.41
4487 5123 4.736793 CAGCATCAAAACTCAACTTGTCAC 59.263 41.667 0.00 0.00 0.00 3.67
4501 5139 7.380536 ACTGAATTTTTATCTGCAGCATCAAA 58.619 30.769 9.47 6.16 0.00 2.69
4516 5154 7.333528 TGCTAGTTTCACTGACTGAATTTTT 57.666 32.000 0.00 0.00 38.74 1.94
4522 5160 3.641436 TCCTTGCTAGTTTCACTGACTGA 59.359 43.478 0.00 0.00 0.00 3.41
4534 5172 5.362430 CCTTCTCAGATACTTCCTTGCTAGT 59.638 44.000 0.00 0.00 0.00 2.57
4535 5173 5.221422 CCCTTCTCAGATACTTCCTTGCTAG 60.221 48.000 0.00 0.00 0.00 3.42
4636 5274 1.263356 GGTGTACCTGGTGCACTCTA 58.737 55.000 35.75 7.78 45.75 2.43
4642 5280 0.251608 AAATGGGGTGTACCTGGTGC 60.252 55.000 10.23 9.10 40.03 5.01
4659 5297 6.273825 GGATAGAGTGAGCGTATGAGAAAAA 58.726 40.000 0.00 0.00 0.00 1.94
4671 5319 3.643792 ACAAGTATGGGGATAGAGTGAGC 59.356 47.826 0.00 0.00 0.00 4.26
4693 5342 7.675062 ACATGGTTGAATTTAAATACCTTGCA 58.325 30.769 22.46 6.62 37.48 4.08
4694 5343 7.009174 CGACATGGTTGAATTTAAATACCTTGC 59.991 37.037 22.46 17.19 37.48 4.01
4697 5346 7.696992 ACGACATGGTTGAATTTAAATACCT 57.303 32.000 16.14 1.02 0.00 3.08
4701 5350 7.923344 TGTGAAACGACATGGTTGAATTTAAAT 59.077 29.630 0.00 0.00 42.39 1.40
4702 5351 7.221067 GTGTGAAACGACATGGTTGAATTTAAA 59.779 33.333 0.00 0.00 42.39 1.52
4703 5352 6.693545 GTGTGAAACGACATGGTTGAATTTAA 59.306 34.615 0.00 0.00 42.39 1.52
4704 5353 6.183360 TGTGTGAAACGACATGGTTGAATTTA 60.183 34.615 0.00 0.00 42.39 1.40
4705 5354 5.040635 GTGTGAAACGACATGGTTGAATTT 58.959 37.500 0.00 0.00 42.39 1.82
4706 5355 4.097135 TGTGTGAAACGACATGGTTGAATT 59.903 37.500 0.00 0.00 42.39 2.17
4708 5357 3.010420 TGTGTGAAACGACATGGTTGAA 58.990 40.909 0.00 0.00 42.39 2.69
4713 5362 2.348498 CGAACTGTGTGAAACGACATGG 60.348 50.000 0.00 0.00 42.39 3.66
4721 5370 2.539338 GCCCGCGAACTGTGTGAAA 61.539 57.895 8.23 0.00 0.00 2.69
4727 5376 4.388499 AATCCGCCCGCGAACTGT 62.388 61.111 8.23 0.00 42.83 3.55
4805 5454 4.747529 TGCTGCTGATCGCGCTGT 62.748 61.111 5.56 0.00 43.27 4.40
4864 5513 6.198237 ACGGTATATGGTACTCTTAGGTCT 57.802 41.667 0.00 0.00 0.00 3.85
4867 5516 5.471456 ACGAACGGTATATGGTACTCTTAGG 59.529 44.000 0.00 0.00 0.00 2.69
4868 5517 6.551385 ACGAACGGTATATGGTACTCTTAG 57.449 41.667 0.00 0.00 0.00 2.18
4869 5518 6.318648 ACAACGAACGGTATATGGTACTCTTA 59.681 38.462 0.00 0.00 0.00 2.10
4870 5519 5.126061 ACAACGAACGGTATATGGTACTCTT 59.874 40.000 0.00 0.00 0.00 2.85
4872 5521 4.925068 ACAACGAACGGTATATGGTACTC 58.075 43.478 0.00 0.00 0.00 2.59
4873 5522 4.398988 TGACAACGAACGGTATATGGTACT 59.601 41.667 0.00 0.00 0.00 2.73
4874 5523 4.671377 TGACAACGAACGGTATATGGTAC 58.329 43.478 0.00 0.00 0.00 3.34
4885 5534 2.470821 ACTTTCCTCTGACAACGAACG 58.529 47.619 0.00 0.00 0.00 3.95
4934 5583 9.575783 TGTTCATTGATGATGATAAATTGTGTG 57.424 29.630 0.00 0.00 44.01 3.82
4935 5584 9.577110 GTGTTCATTGATGATGATAAATTGTGT 57.423 29.630 0.00 0.00 44.01 3.72
4936 5585 9.797556 AGTGTTCATTGATGATGATAAATTGTG 57.202 29.630 0.00 0.00 44.01 3.33
4944 5593 6.596888 ACGAAGAAGTGTTCATTGATGATGAT 59.403 34.615 0.00 0.00 44.01 2.45
4945 5594 5.934043 ACGAAGAAGTGTTCATTGATGATGA 59.066 36.000 0.00 0.00 42.95 2.92
4946 5595 6.174451 ACGAAGAAGTGTTCATTGATGATG 57.826 37.500 0.00 0.00 36.56 3.07
4984 5633 2.908073 GCAAACACACGGCTCTGGG 61.908 63.158 0.00 0.00 0.00 4.45
4991 5640 2.991190 ACGAGTTATAGCAAACACACGG 59.009 45.455 0.00 0.00 31.88 4.94
5010 5660 2.549282 CTTTCGCCGGTGTTCACG 59.451 61.111 16.01 2.25 0.00 4.35
5033 5683 6.433404 AGAATCTCTAAAATATCTACGCGGGA 59.567 38.462 12.47 8.98 0.00 5.14
5051 5734 7.036220 CCCGTATGTGTCCATATTAGAATCTC 58.964 42.308 0.00 0.00 36.02 2.75
5209 5894 7.120138 CGGTAGTTTTTACACATGGGATTACTT 59.880 37.037 0.00 0.00 0.00 2.24
5244 5929 6.479006 TGGGAGCAGGATTGAATATTCTATG 58.521 40.000 15.73 6.00 0.00 2.23
5248 5934 5.360714 TGTTTGGGAGCAGGATTGAATATTC 59.639 40.000 8.60 8.60 0.00 1.75
5364 6051 7.758528 CCCCGATACTTTATAGAAGGAATAACG 59.241 40.741 0.00 0.00 0.00 3.18
5365 6052 8.591940 ACCCCGATACTTTATAGAAGGAATAAC 58.408 37.037 0.00 0.00 0.00 1.89
5366 6053 8.731591 ACCCCGATACTTTATAGAAGGAATAA 57.268 34.615 0.00 0.00 0.00 1.40
5367 6054 8.731591 AACCCCGATACTTTATAGAAGGAATA 57.268 34.615 0.00 0.00 0.00 1.75
5369 6056 7.441903 AAACCCCGATACTTTATAGAAGGAA 57.558 36.000 0.00 0.00 0.00 3.36
5370 6057 7.346436 AGAAAACCCCGATACTTTATAGAAGGA 59.654 37.037 0.00 0.00 0.00 3.36
5372 6059 7.985752 ACAGAAAACCCCGATACTTTATAGAAG 59.014 37.037 0.00 0.00 0.00 2.85
5375 6062 7.046033 ACACAGAAAACCCCGATACTTTATAG 58.954 38.462 0.00 0.00 0.00 1.31
5378 6065 5.231702 ACACAGAAAACCCCGATACTTTA 57.768 39.130 0.00 0.00 0.00 1.85
5404 6091 2.678190 GCATTACTGGTGGTCTGGACTC 60.678 54.545 0.67 0.00 0.00 3.36
5406 6093 1.279271 AGCATTACTGGTGGTCTGGAC 59.721 52.381 0.00 0.00 0.00 4.02
5407 6094 1.656587 AGCATTACTGGTGGTCTGGA 58.343 50.000 0.00 0.00 0.00 3.86
5408 6095 3.845781 ATAGCATTACTGGTGGTCTGG 57.154 47.619 0.00 0.00 34.31 3.86
5409 6096 4.130118 GGAATAGCATTACTGGTGGTCTG 58.870 47.826 0.00 0.00 34.31 3.51
5419 6106 9.807649 AACATTTCATGAAAGGAATAGCATTAC 57.192 29.630 32.81 0.00 36.07 1.89
5448 6135 7.202016 ACATGTTGAAGTGTTATAGTTGTGG 57.798 36.000 0.00 0.00 0.00 4.17
5511 6198 7.894753 TTGCATTCCCAGTTCATATTATGAA 57.105 32.000 13.83 13.83 46.30 2.57
5512 6199 8.481492 AATTGCATTCCCAGTTCATATTATGA 57.519 30.769 2.14 2.14 37.55 2.15
5547 6234 3.338249 GCAGAGAACCTCATTGTTAGCA 58.662 45.455 0.00 0.00 32.06 3.49
5593 6280 8.469309 ACAATATGTAGGGATTTTGGATGAAG 57.531 34.615 0.00 0.00 0.00 3.02
5617 6304 4.553330 TGGATCTTTCAGAACAGGGTAC 57.447 45.455 0.00 0.00 0.00 3.34
5618 6305 5.576563 TTTGGATCTTTCAGAACAGGGTA 57.423 39.130 0.00 0.00 0.00 3.69
5662 6350 2.749076 TGCATGTTACTGGCATGTTCTC 59.251 45.455 7.06 0.00 43.93 2.87
5672 6360 6.000891 AGTACAAATGTGTGCATGTTACTG 57.999 37.500 6.89 0.00 42.36 2.74
5789 6477 6.264744 AGGATGAATAATGAGCAGTTCCAATG 59.735 38.462 0.00 0.00 0.00 2.82
5790 6478 6.371278 AGGATGAATAATGAGCAGTTCCAAT 58.629 36.000 0.00 0.00 0.00 3.16
5817 6515 9.383519 GTAATATACATATTCCATGTGGTCTGG 57.616 37.037 0.00 0.00 34.91 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.