Multiple sequence alignment - TraesCS1B01G441900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G441900 chr1B 100.000 7689 0 0 412 8100 662672160 662664472 0.000000e+00 14200.0
1 TraesCS1B01G441900 chr1B 100.000 349 0 0 1 349 662672571 662672223 0.000000e+00 645.0
2 TraesCS1B01G441900 chr1B 89.720 428 26 9 5963 6381 683138234 683138652 1.550000e-146 531.0
3 TraesCS1B01G441900 chr1B 78.261 460 35 32 7018 7432 662619915 662619476 1.360000e-57 235.0
4 TraesCS1B01G441900 chr1B 83.966 237 35 2 7864 8100 530757600 530757833 2.940000e-54 224.0
5 TraesCS1B01G441900 chr1B 86.264 182 20 5 5908 6086 662632003 662631824 8.300000e-45 193.0
6 TraesCS1B01G441900 chr1B 82.234 197 28 5 5743 5933 662607410 662607215 6.500000e-36 163.0
7 TraesCS1B01G441900 chr1B 91.509 106 3 4 5865 5964 683137874 683137979 3.050000e-29 141.0
8 TraesCS1B01G441900 chr1A 92.221 6980 281 109 928 7781 572213034 572206191 0.000000e+00 9640.0
9 TraesCS1B01G441900 chr1A 81.967 671 62 32 6796 7432 572075857 572075212 1.560000e-141 514.0
10 TraesCS1B01G441900 chr1A 85.714 336 32 2 7781 8100 572205531 572205196 2.800000e-89 340.0
11 TraesCS1B01G441900 chr1A 84.463 354 32 17 566 913 572213892 572213556 2.180000e-85 327.0
12 TraesCS1B01G441900 chr1A 89.928 139 13 1 1158 1296 581580723 581580860 2.320000e-40 178.0
13 TraesCS1B01G441900 chr1D 94.530 5667 197 45 2496 8100 476441642 476436027 0.000000e+00 8643.0
14 TraesCS1B01G441900 chr1D 89.945 1273 73 34 432 1684 476443593 476442356 0.000000e+00 1591.0
15 TraesCS1B01G441900 chr1D 93.491 676 25 7 1832 2500 476442356 476441693 0.000000e+00 987.0
16 TraesCS1B01G441900 chr1D 90.619 501 32 5 5226 5713 460611367 460611865 0.000000e+00 651.0
17 TraesCS1B01G441900 chr1D 79.059 850 86 51 6862 7667 476415579 476414778 4.360000e-137 499.0
18 TraesCS1B01G441900 chr1D 90.526 285 21 4 6102 6381 460612477 460612760 9.930000e-99 372.0
19 TraesCS1B01G441900 chr1D 85.609 271 14 14 5852 6109 460611940 460612198 2.240000e-65 261.0
20 TraesCS1B01G441900 chr1D 81.667 300 49 5 7480 7779 476423563 476423270 2.260000e-60 244.0
21 TraesCS1B01G441900 chr1D 87.821 156 15 4 1158 1311 484399047 484399200 6.460000e-41 180.0
22 TraesCS1B01G441900 chr7D 84.810 237 27 5 7865 8100 269695128 269695356 6.320000e-56 230.0
23 TraesCS1B01G441900 chr7D 82.251 231 37 4 7872 8100 32908675 32908447 6.410000e-46 196.0
24 TraesCS1B01G441900 chr7D 100.000 37 0 0 1755 1791 534541781 534541745 1.460000e-07 69.4
25 TraesCS1B01G441900 chr7D 100.000 37 0 0 1755 1791 534554212 534554176 1.460000e-07 69.4
26 TraesCS1B01G441900 chr7D 100.000 37 0 0 1755 1791 534559657 534559621 1.460000e-07 69.4
27 TraesCS1B01G441900 chr7D 95.238 42 0 2 1758 1797 258225610 258225569 1.890000e-06 65.8
28 TraesCS1B01G441900 chr7B 84.255 235 30 4 7865 8099 271068827 271069054 1.060000e-53 222.0
29 TraesCS1B01G441900 chr7B 100.000 37 0 0 1755 1791 512416009 512416045 1.460000e-07 69.4
30 TraesCS1B01G441900 chr6B 81.667 240 40 4 7863 8100 719949141 719949378 6.410000e-46 196.0
31 TraesCS1B01G441900 chr2B 81.545 233 41 2 7863 8095 23262396 23262166 2.980000e-44 191.0
32 TraesCS1B01G441900 chr2A 81.328 241 39 5 7863 8099 88852164 88851926 2.980000e-44 191.0
33 TraesCS1B01G441900 chr3A 85.417 96 14 0 5178 5273 442761222 442761317 5.170000e-17 100.0
34 TraesCS1B01G441900 chr3B 87.952 83 10 0 5178 5260 421670385 421670303 1.860000e-16 99.0
35 TraesCS1B01G441900 chr2D 100.000 37 0 0 1755 1791 464519495 464519531 1.460000e-07 69.4
36 TraesCS1B01G441900 chr2D 91.304 46 2 2 1756 1800 585063255 585063299 2.440000e-05 62.1
37 TraesCS1B01G441900 chr4B 95.238 42 2 0 1758 1799 449811397 449811356 5.250000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G441900 chr1B 662664472 662672571 8099 True 7422.500000 14200 100.000000 1 8100 2 chr1B.!!$R4 8099
1 TraesCS1B01G441900 chr1B 683137874 683138652 778 False 336.000000 531 90.614500 5865 6381 2 chr1B.!!$F2 516
2 TraesCS1B01G441900 chr1A 572205196 572213892 8696 True 3435.666667 9640 87.466000 566 8100 3 chr1A.!!$R2 7534
3 TraesCS1B01G441900 chr1A 572075212 572075857 645 True 514.000000 514 81.967000 6796 7432 1 chr1A.!!$R1 636
4 TraesCS1B01G441900 chr1D 476436027 476443593 7566 True 3740.333333 8643 92.655333 432 8100 3 chr1D.!!$R3 7668
5 TraesCS1B01G441900 chr1D 476414778 476415579 801 True 499.000000 499 79.059000 6862 7667 1 chr1D.!!$R1 805
6 TraesCS1B01G441900 chr1D 460611367 460612760 1393 False 428.000000 651 88.918000 5226 6381 3 chr1D.!!$F2 1155

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
261 262 0.035317 AGCGCCACTCAGTGAATGAA 59.965 50.000 6.30 0.00 37.52 2.57 F
340 341 0.103208 ACTCGGCGATCAACCATCTC 59.897 55.000 11.27 0.00 0.00 2.75 F
563 565 0.322008 AGAAAAGAGAGCGGGCTTGG 60.322 55.000 0.00 0.00 0.00 3.61 F
1026 1547 0.461961 CCAAACCAAAAACCTCGCCA 59.538 50.000 0.00 0.00 0.00 5.69 F
2454 3038 0.320771 AACTACCTGCTGCTTCACCG 60.321 55.000 0.00 0.00 0.00 4.94 F
3588 4266 0.321210 AACGTGTGGCGATGAATCCA 60.321 50.000 0.00 0.00 44.77 3.41 F
3690 4368 0.318955 GCAGCAAACCATCGCACTTT 60.319 50.000 0.00 0.00 0.00 2.66 F
5072 5764 0.395173 AGTGTTCCTTGGCGTGGTTT 60.395 50.000 0.00 0.00 0.00 3.27 F
5194 5896 0.675837 GTCAGGCTCTTCTGCATGCA 60.676 55.000 21.29 21.29 43.39 3.96 F
5761 6476 1.340308 TGCCATGTGCTTACTCTGCAT 60.340 47.619 7.54 0.00 42.69 3.96 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1900 2469 0.530744 GTGACACTGGCCGACATAGA 59.469 55.000 0.00 0.00 0.00 1.98 R
1901 2470 0.532573 AGTGACACTGGCCGACATAG 59.467 55.000 7.47 0.00 0.00 2.23 R
2440 3024 1.597854 TTGACGGTGAAGCAGCAGG 60.598 57.895 0.00 0.00 0.00 4.85 R
2867 3533 1.738365 CGAGTCAGCTTGATGTCCAGG 60.738 57.143 0.00 0.00 0.00 4.45 R
3666 4344 0.097674 GCGATGGTTTGCTGCAGTAG 59.902 55.000 16.64 0.00 0.00 2.57 R
5194 5896 0.400213 TCCTGTCCAAAGCAACCGAT 59.600 50.000 0.00 0.00 0.00 4.18 R
5652 6367 0.863144 CATGGTGTTTTTGCAGCTGC 59.137 50.000 31.89 31.89 42.50 5.25 R
6634 7924 0.461870 TGCTGCCATTCGCGAAGTAT 60.462 50.000 27.20 7.74 42.08 2.12 R
6673 7963 3.205815 AAAAACTGGTCTGCTGCCA 57.794 47.368 0.00 6.59 34.42 4.92 R
7509 8863 0.320073 CCGTTACCTGAACAGCGGAA 60.320 55.000 11.20 0.05 41.45 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.915812 GTTAATGCCCGACAAACAAAAAT 57.084 34.783 0.00 0.00 0.00 1.82
23 24 5.674989 GTTAATGCCCGACAAACAAAAATG 58.325 37.500 0.00 0.00 0.00 2.32
24 25 3.742433 ATGCCCGACAAACAAAAATGA 57.258 38.095 0.00 0.00 0.00 2.57
25 26 3.090952 TGCCCGACAAACAAAAATGAG 57.909 42.857 0.00 0.00 0.00 2.90
26 27 2.690497 TGCCCGACAAACAAAAATGAGA 59.310 40.909 0.00 0.00 0.00 3.27
27 28 3.243367 TGCCCGACAAACAAAAATGAGAG 60.243 43.478 0.00 0.00 0.00 3.20
28 29 3.243401 GCCCGACAAACAAAAATGAGAGT 60.243 43.478 0.00 0.00 0.00 3.24
29 30 4.290155 CCCGACAAACAAAAATGAGAGTG 58.710 43.478 0.00 0.00 0.00 3.51
30 31 4.202010 CCCGACAAACAAAAATGAGAGTGT 60.202 41.667 0.00 0.00 0.00 3.55
31 32 5.008217 CCCGACAAACAAAAATGAGAGTGTA 59.992 40.000 0.00 0.00 0.00 2.90
32 33 5.907391 CCGACAAACAAAAATGAGAGTGTAC 59.093 40.000 0.00 0.00 0.00 2.90
33 34 6.457663 CCGACAAACAAAAATGAGAGTGTACA 60.458 38.462 0.00 0.00 0.00 2.90
34 35 7.132213 CGACAAACAAAAATGAGAGTGTACAT 58.868 34.615 0.00 0.00 0.00 2.29
35 36 7.643764 CGACAAACAAAAATGAGAGTGTACATT 59.356 33.333 0.00 0.00 38.18 2.71
36 37 8.856490 ACAAACAAAAATGAGAGTGTACATTC 57.144 30.769 10.23 10.23 35.99 2.67
37 38 8.465999 ACAAACAAAAATGAGAGTGTACATTCA 58.534 29.630 19.24 13.88 35.99 2.57
38 39 8.961092 CAAACAAAAATGAGAGTGTACATTCAG 58.039 33.333 19.24 5.69 35.99 3.02
39 40 8.450578 AACAAAAATGAGAGTGTACATTCAGA 57.549 30.769 19.24 6.49 35.99 3.27
40 41 7.865707 ACAAAAATGAGAGTGTACATTCAGAC 58.134 34.615 19.24 10.93 35.99 3.51
41 42 6.712241 AAAATGAGAGTGTACATTCAGACG 57.288 37.500 19.24 0.00 35.99 4.18
42 43 3.217599 TGAGAGTGTACATTCAGACGC 57.782 47.619 19.24 5.10 0.00 5.19
43 44 2.556622 TGAGAGTGTACATTCAGACGCA 59.443 45.455 19.24 7.28 0.00 5.24
44 45 3.005367 TGAGAGTGTACATTCAGACGCAA 59.995 43.478 19.24 0.00 0.00 4.85
45 46 3.987868 GAGAGTGTACATTCAGACGCAAA 59.012 43.478 19.24 0.00 0.00 3.68
46 47 4.377021 AGAGTGTACATTCAGACGCAAAA 58.623 39.130 19.24 0.00 0.00 2.44
47 48 4.814234 AGAGTGTACATTCAGACGCAAAAA 59.186 37.500 19.24 0.00 0.00 1.94
48 49 5.470098 AGAGTGTACATTCAGACGCAAAAAT 59.530 36.000 19.24 0.00 0.00 1.82
49 50 5.451908 AGTGTACATTCAGACGCAAAAATG 58.548 37.500 0.00 0.00 35.68 2.32
50 51 4.088496 GTGTACATTCAGACGCAAAAATGC 59.912 41.667 0.00 0.00 33.42 3.56
51 52 2.676076 ACATTCAGACGCAAAAATGCC 58.324 42.857 0.00 0.00 33.42 4.40
52 53 1.650153 CATTCAGACGCAAAAATGCCG 59.350 47.619 0.00 0.00 0.00 5.69
53 54 0.039617 TTCAGACGCAAAAATGCCGG 60.040 50.000 0.00 0.00 0.00 6.13
54 55 0.886938 TCAGACGCAAAAATGCCGGA 60.887 50.000 5.05 0.00 0.00 5.14
55 56 0.729140 CAGACGCAAAAATGCCGGAC 60.729 55.000 5.05 0.00 0.00 4.79
56 57 1.795962 GACGCAAAAATGCCGGACG 60.796 57.895 5.05 0.00 0.00 4.79
57 58 2.503809 CGCAAAAATGCCGGACGG 60.504 61.111 5.05 6.35 38.57 4.79
58 59 2.958576 GCAAAAATGCCGGACGGA 59.041 55.556 15.99 0.00 37.50 4.69
59 60 1.287503 GCAAAAATGCCGGACGGAA 59.712 52.632 15.99 3.83 37.50 4.30
60 61 0.108851 GCAAAAATGCCGGACGGAAT 60.109 50.000 15.99 6.68 34.21 3.01
61 62 1.133407 GCAAAAATGCCGGACGGAATA 59.867 47.619 15.99 0.00 30.64 1.75
62 63 2.794631 GCAAAAATGCCGGACGGAATAG 60.795 50.000 15.99 2.31 30.64 1.73
63 64 2.680841 CAAAAATGCCGGACGGAATAGA 59.319 45.455 15.99 0.00 30.64 1.98
64 65 2.930826 AAATGCCGGACGGAATAGAT 57.069 45.000 15.99 0.00 30.64 1.98
65 66 2.930826 AATGCCGGACGGAATAGATT 57.069 45.000 15.99 1.31 30.64 2.40
66 67 2.457366 ATGCCGGACGGAATAGATTC 57.543 50.000 15.99 0.00 37.50 2.52
67 68 1.410004 TGCCGGACGGAATAGATTCT 58.590 50.000 15.99 0.00 37.00 2.40
68 69 1.760613 TGCCGGACGGAATAGATTCTT 59.239 47.619 15.99 0.00 37.00 2.52
69 70 2.135933 GCCGGACGGAATAGATTCTTG 58.864 52.381 15.99 0.00 37.00 3.02
70 71 2.755650 CCGGACGGAATAGATTCTTGG 58.244 52.381 4.40 0.00 37.00 3.61
71 72 2.102588 CCGGACGGAATAGATTCTTGGT 59.897 50.000 4.40 0.00 37.00 3.67
72 73 3.123804 CGGACGGAATAGATTCTTGGTG 58.876 50.000 2.44 0.00 37.00 4.17
73 74 3.181479 CGGACGGAATAGATTCTTGGTGA 60.181 47.826 2.44 0.00 37.00 4.02
74 75 4.679639 CGGACGGAATAGATTCTTGGTGAA 60.680 45.833 2.44 0.00 39.24 3.18
75 76 5.183228 GGACGGAATAGATTCTTGGTGAAA 58.817 41.667 2.44 0.00 38.29 2.69
76 77 5.294552 GGACGGAATAGATTCTTGGTGAAAG 59.705 44.000 2.44 0.00 38.29 2.62
77 78 5.186198 ACGGAATAGATTCTTGGTGAAAGG 58.814 41.667 2.44 0.00 38.29 3.11
78 79 4.035675 CGGAATAGATTCTTGGTGAAAGGC 59.964 45.833 2.44 0.00 38.29 4.35
79 80 4.035675 GGAATAGATTCTTGGTGAAAGGCG 59.964 45.833 2.44 0.00 38.29 5.52
80 81 1.826385 AGATTCTTGGTGAAAGGCGG 58.174 50.000 0.00 0.00 38.29 6.13
81 82 0.171231 GATTCTTGGTGAAAGGCGGC 59.829 55.000 0.00 0.00 38.29 6.53
82 83 0.251341 ATTCTTGGTGAAAGGCGGCT 60.251 50.000 5.25 5.25 38.29 5.52
83 84 0.398696 TTCTTGGTGAAAGGCGGCTA 59.601 50.000 13.71 0.00 36.46 3.93
84 85 0.398696 TCTTGGTGAAAGGCGGCTAA 59.601 50.000 13.71 0.00 36.46 3.09
85 86 0.804989 CTTGGTGAAAGGCGGCTAAG 59.195 55.000 13.71 7.27 31.68 2.18
86 87 0.109723 TTGGTGAAAGGCGGCTAAGT 59.890 50.000 13.71 0.00 0.00 2.24
87 88 0.321298 TGGTGAAAGGCGGCTAAGTC 60.321 55.000 13.71 11.06 0.00 3.01
88 89 0.036294 GGTGAAAGGCGGCTAAGTCT 60.036 55.000 13.71 0.00 0.00 3.24
89 90 1.360820 GTGAAAGGCGGCTAAGTCTC 58.639 55.000 13.71 7.67 0.00 3.36
90 91 0.249398 TGAAAGGCGGCTAAGTCTCC 59.751 55.000 13.71 0.00 0.00 3.71
91 92 0.462225 GAAAGGCGGCTAAGTCTCCC 60.462 60.000 13.71 0.00 0.00 4.30
92 93 1.198759 AAAGGCGGCTAAGTCTCCCA 61.199 55.000 13.71 0.00 0.00 4.37
93 94 1.900545 AAGGCGGCTAAGTCTCCCAC 61.901 60.000 13.71 0.00 0.00 4.61
94 95 2.187163 GCGGCTAAGTCTCCCACC 59.813 66.667 0.00 0.00 0.00 4.61
95 96 2.901042 CGGCTAAGTCTCCCACCC 59.099 66.667 0.00 0.00 0.00 4.61
96 97 1.987855 CGGCTAAGTCTCCCACCCA 60.988 63.158 0.00 0.00 0.00 4.51
97 98 1.550130 CGGCTAAGTCTCCCACCCAA 61.550 60.000 0.00 0.00 0.00 4.12
98 99 0.696501 GGCTAAGTCTCCCACCCAAA 59.303 55.000 0.00 0.00 0.00 3.28
99 100 1.340114 GGCTAAGTCTCCCACCCAAAG 60.340 57.143 0.00 0.00 0.00 2.77
100 101 1.351350 GCTAAGTCTCCCACCCAAAGT 59.649 52.381 0.00 0.00 0.00 2.66
101 102 2.615747 GCTAAGTCTCCCACCCAAAGTC 60.616 54.545 0.00 0.00 0.00 3.01
102 103 0.396811 AAGTCTCCCACCCAAAGTCG 59.603 55.000 0.00 0.00 0.00 4.18
103 104 1.671379 GTCTCCCACCCAAAGTCGC 60.671 63.158 0.00 0.00 0.00 5.19
104 105 2.144078 TCTCCCACCCAAAGTCGCA 61.144 57.895 0.00 0.00 0.00 5.10
105 106 1.228124 CTCCCACCCAAAGTCGCAA 60.228 57.895 0.00 0.00 0.00 4.85
106 107 0.821711 CTCCCACCCAAAGTCGCAAA 60.822 55.000 0.00 0.00 0.00 3.68
107 108 0.178975 TCCCACCCAAAGTCGCAAAT 60.179 50.000 0.00 0.00 0.00 2.32
108 109 0.038343 CCCACCCAAAGTCGCAAATG 60.038 55.000 0.00 0.00 0.00 2.32
109 110 0.038343 CCACCCAAAGTCGCAAATGG 60.038 55.000 0.00 0.00 0.00 3.16
110 111 0.958091 CACCCAAAGTCGCAAATGGA 59.042 50.000 0.00 0.00 34.82 3.41
111 112 1.339610 CACCCAAAGTCGCAAATGGAA 59.660 47.619 0.00 0.00 34.82 3.53
112 113 2.035632 ACCCAAAGTCGCAAATGGAAA 58.964 42.857 0.00 0.00 34.82 3.13
113 114 2.432510 ACCCAAAGTCGCAAATGGAAAA 59.567 40.909 0.00 0.00 34.82 2.29
114 115 3.070878 ACCCAAAGTCGCAAATGGAAAAT 59.929 39.130 0.00 0.00 34.82 1.82
115 116 4.064388 CCCAAAGTCGCAAATGGAAAATT 58.936 39.130 0.00 0.00 34.82 1.82
116 117 4.152223 CCCAAAGTCGCAAATGGAAAATTC 59.848 41.667 0.00 0.00 34.82 2.17
133 134 8.202745 GGAAAATTCCTACTAGAGTCATTGTG 57.797 38.462 4.91 0.00 44.11 3.33
134 135 8.041323 GGAAAATTCCTACTAGAGTCATTGTGA 58.959 37.037 4.91 0.00 44.11 3.58
135 136 9.092876 GAAAATTCCTACTAGAGTCATTGTGAG 57.907 37.037 0.00 0.00 0.00 3.51
136 137 7.962995 AATTCCTACTAGAGTCATTGTGAGA 57.037 36.000 0.00 0.00 0.00 3.27
137 138 6.761099 TTCCTACTAGAGTCATTGTGAGAC 57.239 41.667 0.00 0.00 36.26 3.36
138 139 5.194432 TCCTACTAGAGTCATTGTGAGACC 58.806 45.833 0.00 0.00 36.68 3.85
139 140 4.035792 CCTACTAGAGTCATTGTGAGACCG 59.964 50.000 0.00 0.00 36.68 4.79
140 141 3.422796 ACTAGAGTCATTGTGAGACCGT 58.577 45.455 0.00 0.00 36.68 4.83
141 142 3.827302 ACTAGAGTCATTGTGAGACCGTT 59.173 43.478 0.00 0.00 36.68 4.44
142 143 3.032017 AGAGTCATTGTGAGACCGTTG 57.968 47.619 0.00 0.00 36.68 4.10
143 144 2.365617 AGAGTCATTGTGAGACCGTTGT 59.634 45.455 0.00 0.00 36.68 3.32
144 145 2.731976 GAGTCATTGTGAGACCGTTGTC 59.268 50.000 0.00 0.00 42.09 3.18
145 146 2.102420 AGTCATTGTGAGACCGTTGTCA 59.898 45.455 0.00 0.00 44.33 3.58
146 147 2.869801 GTCATTGTGAGACCGTTGTCAA 59.130 45.455 0.00 0.00 44.33 3.18
147 148 2.869801 TCATTGTGAGACCGTTGTCAAC 59.130 45.455 5.58 5.58 44.33 3.18
148 149 1.658994 TTGTGAGACCGTTGTCAACC 58.341 50.000 10.12 0.00 44.33 3.77
149 150 0.537653 TGTGAGACCGTTGTCAACCA 59.462 50.000 10.12 0.00 44.33 3.67
150 151 1.140052 TGTGAGACCGTTGTCAACCAT 59.860 47.619 10.12 0.00 44.33 3.55
151 152 2.218603 GTGAGACCGTTGTCAACCATT 58.781 47.619 10.12 0.00 44.33 3.16
152 153 2.223377 GTGAGACCGTTGTCAACCATTC 59.777 50.000 10.12 4.29 44.33 2.67
153 154 1.459592 GAGACCGTTGTCAACCATTCG 59.540 52.381 10.12 0.00 44.33 3.34
154 155 1.202604 AGACCGTTGTCAACCATTCGT 60.203 47.619 10.12 0.00 44.33 3.85
155 156 1.193874 GACCGTTGTCAACCATTCGTC 59.806 52.381 10.12 4.87 41.37 4.20
156 157 1.202604 ACCGTTGTCAACCATTCGTCT 60.203 47.619 10.12 0.00 0.00 4.18
157 158 1.459592 CCGTTGTCAACCATTCGTCTC 59.540 52.381 10.12 0.00 0.00 3.36
158 159 2.404215 CGTTGTCAACCATTCGTCTCT 58.596 47.619 10.12 0.00 0.00 3.10
159 160 3.571571 CGTTGTCAACCATTCGTCTCTA 58.428 45.455 10.12 0.00 0.00 2.43
160 161 3.608506 CGTTGTCAACCATTCGTCTCTAG 59.391 47.826 10.12 0.00 0.00 2.43
161 162 3.868757 TGTCAACCATTCGTCTCTAGG 57.131 47.619 0.00 0.00 0.00 3.02
162 163 2.094182 TGTCAACCATTCGTCTCTAGGC 60.094 50.000 0.00 0.00 0.00 3.93
163 164 2.094182 GTCAACCATTCGTCTCTAGGCA 60.094 50.000 0.00 0.00 0.00 4.75
164 165 2.166459 TCAACCATTCGTCTCTAGGCAG 59.834 50.000 0.00 0.00 0.00 4.85
165 166 0.461961 ACCATTCGTCTCTAGGCAGC 59.538 55.000 0.00 0.00 0.00 5.25
166 167 0.461548 CCATTCGTCTCTAGGCAGCA 59.538 55.000 0.00 0.00 0.00 4.41
167 168 1.134699 CCATTCGTCTCTAGGCAGCAA 60.135 52.381 0.00 0.00 0.00 3.91
168 169 2.200067 CATTCGTCTCTAGGCAGCAAG 58.800 52.381 0.00 0.00 0.00 4.01
169 170 1.545841 TTCGTCTCTAGGCAGCAAGA 58.454 50.000 0.00 0.00 0.00 3.02
170 171 1.769026 TCGTCTCTAGGCAGCAAGAT 58.231 50.000 0.00 0.00 0.00 2.40
171 172 2.103373 TCGTCTCTAGGCAGCAAGATT 58.897 47.619 0.00 0.00 0.00 2.40
172 173 2.099921 TCGTCTCTAGGCAGCAAGATTC 59.900 50.000 0.00 0.00 0.00 2.52
173 174 2.100584 CGTCTCTAGGCAGCAAGATTCT 59.899 50.000 0.00 0.00 0.00 2.40
174 175 3.716601 GTCTCTAGGCAGCAAGATTCTC 58.283 50.000 0.00 0.00 0.00 2.87
175 176 3.131933 GTCTCTAGGCAGCAAGATTCTCA 59.868 47.826 0.00 0.00 0.00 3.27
176 177 3.966006 TCTCTAGGCAGCAAGATTCTCAT 59.034 43.478 0.00 0.00 0.00 2.90
177 178 4.408270 TCTCTAGGCAGCAAGATTCTCATT 59.592 41.667 0.00 0.00 0.00 2.57
178 179 4.449131 TCTAGGCAGCAAGATTCTCATTG 58.551 43.478 0.00 0.00 0.00 2.82
179 180 3.361281 AGGCAGCAAGATTCTCATTGA 57.639 42.857 0.00 0.00 0.00 2.57
180 181 3.015327 AGGCAGCAAGATTCTCATTGAC 58.985 45.455 0.00 0.00 0.00 3.18
181 182 2.751259 GGCAGCAAGATTCTCATTGACA 59.249 45.455 0.00 0.00 0.00 3.58
182 183 3.380637 GGCAGCAAGATTCTCATTGACAT 59.619 43.478 0.00 0.00 0.00 3.06
183 184 4.352039 GCAGCAAGATTCTCATTGACATG 58.648 43.478 0.00 0.00 0.00 3.21
184 185 4.095932 GCAGCAAGATTCTCATTGACATGA 59.904 41.667 0.00 0.00 37.05 3.07
185 186 5.392703 GCAGCAAGATTCTCATTGACATGAA 60.393 40.000 0.00 0.00 39.04 2.57
186 187 6.617879 CAGCAAGATTCTCATTGACATGAAA 58.382 36.000 0.00 0.00 39.04 2.69
187 188 7.088272 CAGCAAGATTCTCATTGACATGAAAA 58.912 34.615 0.00 0.00 39.04 2.29
188 189 7.597369 CAGCAAGATTCTCATTGACATGAAAAA 59.403 33.333 0.00 0.00 39.04 1.94
189 190 7.813148 AGCAAGATTCTCATTGACATGAAAAAG 59.187 33.333 0.00 0.00 39.04 2.27
190 191 7.597743 GCAAGATTCTCATTGACATGAAAAAGT 59.402 33.333 0.00 0.00 39.04 2.66
191 192 9.472361 CAAGATTCTCATTGACATGAAAAAGTT 57.528 29.630 0.00 0.00 39.04 2.66
194 195 9.565213 GATTCTCATTGACATGAAAAAGTTAGG 57.435 33.333 0.00 0.00 39.04 2.69
195 196 7.452880 TCTCATTGACATGAAAAAGTTAGGG 57.547 36.000 0.00 0.00 39.04 3.53
196 197 7.004086 TCTCATTGACATGAAAAAGTTAGGGT 58.996 34.615 0.00 0.00 39.04 4.34
197 198 7.505585 TCTCATTGACATGAAAAAGTTAGGGTT 59.494 33.333 0.00 0.00 39.04 4.11
198 199 8.017418 TCATTGACATGAAAAAGTTAGGGTTT 57.983 30.769 0.00 0.00 36.41 3.27
199 200 9.137459 TCATTGACATGAAAAAGTTAGGGTTTA 57.863 29.630 0.00 0.00 36.41 2.01
200 201 9.927668 CATTGACATGAAAAAGTTAGGGTTTAT 57.072 29.630 0.00 0.00 31.07 1.40
202 203 9.974980 TTGACATGAAAAAGTTAGGGTTTATTC 57.025 29.630 0.00 0.00 0.00 1.75
203 204 9.362151 TGACATGAAAAAGTTAGGGTTTATTCT 57.638 29.630 0.00 0.00 0.00 2.40
212 213 9.700831 AAAGTTAGGGTTTATTCTTATCATGCT 57.299 29.630 0.00 0.00 0.00 3.79
227 228 9.187996 TCTTATCATGCTAAAATCACCATTTCA 57.812 29.630 0.00 0.00 30.37 2.69
228 229 9.806203 CTTATCATGCTAAAATCACCATTTCAA 57.194 29.630 0.00 0.00 30.37 2.69
230 231 8.882415 ATCATGCTAAAATCACCATTTCAATC 57.118 30.769 0.00 0.00 30.37 2.67
231 232 7.838884 TCATGCTAAAATCACCATTTCAATCA 58.161 30.769 0.00 0.00 30.37 2.57
232 233 8.479689 TCATGCTAAAATCACCATTTCAATCAT 58.520 29.630 0.00 0.00 30.37 2.45
233 234 9.752961 CATGCTAAAATCACCATTTCAATCATA 57.247 29.630 0.00 0.00 30.37 2.15
234 235 9.754382 ATGCTAAAATCACCATTTCAATCATAC 57.246 29.630 0.00 0.00 30.37 2.39
235 236 8.747471 TGCTAAAATCACCATTTCAATCATACA 58.253 29.630 0.00 0.00 30.37 2.29
236 237 9.585099 GCTAAAATCACCATTTCAATCATACAA 57.415 29.630 0.00 0.00 30.37 2.41
239 240 8.483307 AAATCACCATTTCAATCATACAAAGC 57.517 30.769 0.00 0.00 0.00 3.51
240 241 5.964758 TCACCATTTCAATCATACAAAGCC 58.035 37.500 0.00 0.00 0.00 4.35
241 242 5.105392 TCACCATTTCAATCATACAAAGCCC 60.105 40.000 0.00 0.00 0.00 5.19
242 243 4.776837 ACCATTTCAATCATACAAAGCCCA 59.223 37.500 0.00 0.00 0.00 5.36
243 244 5.105228 ACCATTTCAATCATACAAAGCCCAG 60.105 40.000 0.00 0.00 0.00 4.45
244 245 4.454728 TTTCAATCATACAAAGCCCAGC 57.545 40.909 0.00 0.00 0.00 4.85
245 246 2.016318 TCAATCATACAAAGCCCAGCG 58.984 47.619 0.00 0.00 0.00 5.18
246 247 0.740737 AATCATACAAAGCCCAGCGC 59.259 50.000 0.00 0.00 37.98 5.92
247 248 1.103398 ATCATACAAAGCCCAGCGCC 61.103 55.000 2.29 0.00 38.78 6.53
248 249 2.045708 CATACAAAGCCCAGCGCCA 61.046 57.895 2.29 0.00 38.78 5.69
249 250 2.046285 ATACAAAGCCCAGCGCCAC 61.046 57.895 2.29 0.00 38.78 5.01
250 251 2.484287 ATACAAAGCCCAGCGCCACT 62.484 55.000 2.29 0.00 38.78 4.00
251 252 3.741476 CAAAGCCCAGCGCCACTC 61.741 66.667 2.29 0.00 38.78 3.51
252 253 4.269523 AAAGCCCAGCGCCACTCA 62.270 61.111 2.29 0.00 38.78 3.41
253 254 4.711949 AAGCCCAGCGCCACTCAG 62.712 66.667 2.29 0.00 38.78 3.35
256 257 4.007644 CCCAGCGCCACTCAGTGA 62.008 66.667 6.30 0.00 35.23 3.41
257 258 2.031012 CCAGCGCCACTCAGTGAA 59.969 61.111 6.30 0.00 35.23 3.18
258 259 1.376424 CCAGCGCCACTCAGTGAAT 60.376 57.895 6.30 0.00 35.23 2.57
259 260 1.642037 CCAGCGCCACTCAGTGAATG 61.642 60.000 6.30 0.00 35.23 2.67
260 261 0.671472 CAGCGCCACTCAGTGAATGA 60.671 55.000 6.30 0.00 35.23 2.57
261 262 0.035317 AGCGCCACTCAGTGAATGAA 59.965 50.000 6.30 0.00 37.52 2.57
262 263 0.166814 GCGCCACTCAGTGAATGAAC 59.833 55.000 6.30 0.00 37.52 3.18
263 264 0.439985 CGCCACTCAGTGAATGAACG 59.560 55.000 6.30 2.94 37.52 3.95
264 265 0.798776 GCCACTCAGTGAATGAACGG 59.201 55.000 6.30 0.00 37.52 4.44
265 266 1.878102 GCCACTCAGTGAATGAACGGT 60.878 52.381 6.30 0.00 37.52 4.83
266 267 1.800586 CCACTCAGTGAATGAACGGTG 59.199 52.381 6.30 1.39 37.52 4.94
267 268 1.800586 CACTCAGTGAATGAACGGTGG 59.199 52.381 0.00 0.00 37.52 4.61
268 269 0.798776 CTCAGTGAATGAACGGTGGC 59.201 55.000 0.00 0.00 37.52 5.01
269 270 0.107643 TCAGTGAATGAACGGTGGCA 59.892 50.000 0.00 0.00 34.02 4.92
270 271 1.167851 CAGTGAATGAACGGTGGCAT 58.832 50.000 0.00 0.00 0.00 4.40
271 272 1.541147 CAGTGAATGAACGGTGGCATT 59.459 47.619 8.63 8.63 37.43 3.56
272 273 1.541147 AGTGAATGAACGGTGGCATTG 59.459 47.619 12.44 0.00 35.05 2.82
273 274 1.269448 GTGAATGAACGGTGGCATTGT 59.731 47.619 12.44 0.00 35.05 2.71
274 275 1.959985 TGAATGAACGGTGGCATTGTT 59.040 42.857 12.44 6.98 35.05 2.83
275 276 2.288091 TGAATGAACGGTGGCATTGTTG 60.288 45.455 11.35 0.00 35.05 3.33
276 277 1.327303 ATGAACGGTGGCATTGTTGT 58.673 45.000 11.35 0.00 0.00 3.32
277 278 0.383590 TGAACGGTGGCATTGTTGTG 59.616 50.000 11.35 0.00 0.00 3.33
278 279 0.939106 GAACGGTGGCATTGTTGTGC 60.939 55.000 11.35 0.00 44.31 4.57
279 280 2.428902 CGGTGGCATTGTTGTGCG 60.429 61.111 0.00 0.00 45.97 5.34
280 281 2.734346 GGTGGCATTGTTGTGCGC 60.734 61.111 0.00 0.00 45.97 6.09
281 282 2.027314 GTGGCATTGTTGTGCGCA 59.973 55.556 5.66 5.66 45.97 6.09
282 283 2.017783 GTGGCATTGTTGTGCGCAG 61.018 57.895 12.22 0.00 45.97 5.18
283 284 2.336088 GGCATTGTTGTGCGCAGT 59.664 55.556 12.22 0.00 45.97 4.40
284 285 1.730547 GGCATTGTTGTGCGCAGTC 60.731 57.895 12.22 0.00 45.97 3.51
285 286 1.008652 GCATTGTTGTGCGCAGTCA 60.009 52.632 12.22 2.53 35.10 3.41
286 287 0.387622 GCATTGTTGTGCGCAGTCAT 60.388 50.000 12.22 0.00 35.10 3.06
287 288 1.135717 GCATTGTTGTGCGCAGTCATA 60.136 47.619 12.22 0.00 35.10 2.15
288 289 2.508867 CATTGTTGTGCGCAGTCATAC 58.491 47.619 12.22 8.19 0.00 2.39
289 290 0.510790 TTGTTGTGCGCAGTCATACG 59.489 50.000 12.22 0.00 0.00 3.06
290 291 0.598942 TGTTGTGCGCAGTCATACGT 60.599 50.000 12.22 0.00 0.00 3.57
291 292 0.179250 GTTGTGCGCAGTCATACGTG 60.179 55.000 12.22 0.00 0.00 4.49
292 293 0.319125 TTGTGCGCAGTCATACGTGA 60.319 50.000 12.22 0.00 0.00 4.35
306 307 6.073327 TCATACGTGACTCCATGTAGATTC 57.927 41.667 0.00 0.00 45.03 2.52
307 308 5.828328 TCATACGTGACTCCATGTAGATTCT 59.172 40.000 0.00 0.00 45.03 2.40
308 309 6.321435 TCATACGTGACTCCATGTAGATTCTT 59.679 38.462 0.00 0.00 45.03 2.52
309 310 4.748892 ACGTGACTCCATGTAGATTCTTG 58.251 43.478 0.00 0.00 40.52 3.02
310 311 4.220821 ACGTGACTCCATGTAGATTCTTGT 59.779 41.667 0.00 0.00 40.52 3.16
311 312 4.564372 CGTGACTCCATGTAGATTCTTGTG 59.436 45.833 0.00 0.00 0.00 3.33
312 313 5.622233 CGTGACTCCATGTAGATTCTTGTGA 60.622 44.000 0.00 0.00 0.00 3.58
313 314 5.578727 GTGACTCCATGTAGATTCTTGTGAC 59.421 44.000 0.00 0.00 0.00 3.67
314 315 4.748892 ACTCCATGTAGATTCTTGTGACG 58.251 43.478 0.00 0.00 0.00 4.35
315 316 4.115516 CTCCATGTAGATTCTTGTGACGG 58.884 47.826 0.00 0.00 0.00 4.79
316 317 2.609459 CCATGTAGATTCTTGTGACGGC 59.391 50.000 0.00 0.00 0.00 5.68
317 318 3.261580 CATGTAGATTCTTGTGACGGCA 58.738 45.455 0.00 0.00 0.00 5.69
318 319 3.394674 TGTAGATTCTTGTGACGGCAA 57.605 42.857 0.00 0.00 0.00 4.52
319 320 3.734463 TGTAGATTCTTGTGACGGCAAA 58.266 40.909 0.00 0.00 0.00 3.68
320 321 4.130857 TGTAGATTCTTGTGACGGCAAAA 58.869 39.130 0.00 0.00 0.00 2.44
321 322 4.576873 TGTAGATTCTTGTGACGGCAAAAA 59.423 37.500 0.00 0.00 0.00 1.94
322 323 3.964909 AGATTCTTGTGACGGCAAAAAC 58.035 40.909 0.00 0.00 0.00 2.43
323 324 3.632145 AGATTCTTGTGACGGCAAAAACT 59.368 39.130 0.00 0.00 0.00 2.66
324 325 3.414549 TTCTTGTGACGGCAAAAACTC 57.585 42.857 0.00 0.00 0.00 3.01
325 326 1.329292 TCTTGTGACGGCAAAAACTCG 59.671 47.619 0.00 0.00 0.00 4.18
326 327 0.378962 TTGTGACGGCAAAAACTCGG 59.621 50.000 0.00 0.00 0.00 4.63
327 328 1.370051 GTGACGGCAAAAACTCGGC 60.370 57.895 0.00 0.00 0.00 5.54
331 332 4.765611 GGCAAAAACTCGGCGATC 57.234 55.556 11.27 0.00 0.00 3.69
332 333 1.873165 GGCAAAAACTCGGCGATCA 59.127 52.632 11.27 0.00 0.00 2.92
333 334 0.239879 GGCAAAAACTCGGCGATCAA 59.760 50.000 11.27 0.00 0.00 2.57
334 335 1.327507 GCAAAAACTCGGCGATCAAC 58.672 50.000 11.27 0.00 0.00 3.18
335 336 1.963747 CAAAAACTCGGCGATCAACC 58.036 50.000 11.27 0.00 0.00 3.77
336 337 1.265635 CAAAAACTCGGCGATCAACCA 59.734 47.619 11.27 0.00 0.00 3.67
337 338 1.821216 AAAACTCGGCGATCAACCAT 58.179 45.000 11.27 0.00 0.00 3.55
338 339 1.369625 AAACTCGGCGATCAACCATC 58.630 50.000 11.27 0.00 0.00 3.51
339 340 0.537188 AACTCGGCGATCAACCATCT 59.463 50.000 11.27 0.00 0.00 2.90
340 341 0.103208 ACTCGGCGATCAACCATCTC 59.897 55.000 11.27 0.00 0.00 2.75
341 342 0.387202 CTCGGCGATCAACCATCTCT 59.613 55.000 11.27 0.00 0.00 3.10
342 343 0.824109 TCGGCGATCAACCATCTCTT 59.176 50.000 4.99 0.00 0.00 2.85
343 344 2.028876 TCGGCGATCAACCATCTCTTA 58.971 47.619 4.99 0.00 0.00 2.10
344 345 2.628178 TCGGCGATCAACCATCTCTTAT 59.372 45.455 4.99 0.00 0.00 1.73
345 346 2.733552 CGGCGATCAACCATCTCTTATG 59.266 50.000 0.00 0.00 0.00 1.90
346 347 3.733337 GGCGATCAACCATCTCTTATGT 58.267 45.455 0.00 0.00 0.00 2.29
347 348 4.558697 CGGCGATCAACCATCTCTTATGTA 60.559 45.833 0.00 0.00 0.00 2.29
348 349 5.482908 GGCGATCAACCATCTCTTATGTAT 58.517 41.667 0.00 0.00 0.00 2.29
457 458 4.811969 AACACGTGTAGATGTATTCCCA 57.188 40.909 23.69 0.00 0.00 4.37
459 460 4.755411 ACACGTGTAGATGTATTCCCAAG 58.245 43.478 21.98 0.00 0.00 3.61
460 461 4.464951 ACACGTGTAGATGTATTCCCAAGA 59.535 41.667 21.98 0.00 0.00 3.02
461 462 5.128827 ACACGTGTAGATGTATTCCCAAGAT 59.871 40.000 21.98 0.00 0.00 2.40
463 464 7.147794 ACACGTGTAGATGTATTCCCAAGATTA 60.148 37.037 21.98 0.00 0.00 1.75
465 466 9.085645 ACGTGTAGATGTATTCCCAAGATTATA 57.914 33.333 0.00 0.00 0.00 0.98
466 467 9.574458 CGTGTAGATGTATTCCCAAGATTATAG 57.426 37.037 0.00 0.00 0.00 1.31
513 515 2.552315 GGCTGATTTCCGAAGAACACAA 59.448 45.455 0.00 0.00 0.00 3.33
516 518 4.611581 GCTGATTTCCGAAGAACACAACTC 60.612 45.833 0.00 0.00 0.00 3.01
517 519 4.447290 TGATTTCCGAAGAACACAACTCA 58.553 39.130 0.00 0.00 0.00 3.41
548 550 5.563671 GCCCTTTTGCAAAACAACAAAGAAA 60.564 36.000 20.46 0.00 38.23 2.52
549 551 6.442112 CCCTTTTGCAAAACAACAAAGAAAA 58.558 32.000 20.46 0.00 38.23 2.29
553 555 7.721286 TTTGCAAAACAACAAAGAAAAGAGA 57.279 28.000 10.02 0.00 38.23 3.10
555 557 5.348451 TGCAAAACAACAAAGAAAAGAGAGC 59.652 36.000 0.00 0.00 0.00 4.09
561 563 1.882623 CAAAGAAAAGAGAGCGGGCTT 59.117 47.619 0.00 0.00 0.00 4.35
563 565 0.322008 AGAAAAGAGAGCGGGCTTGG 60.322 55.000 0.00 0.00 0.00 3.61
595 597 3.793775 TTTTGCGCGTCCGGACTGA 62.794 57.895 30.92 10.08 33.41 3.41
612 614 6.090898 CCGGACTGACAGTAAAATTGAACTAG 59.909 42.308 8.41 0.00 0.00 2.57
627 630 1.568504 ACTAGAATTCCCGCCACTCA 58.431 50.000 0.65 0.00 0.00 3.41
636 639 2.106683 CCGCCACTCAAACCGATCC 61.107 63.158 0.00 0.00 0.00 3.36
716 725 1.562691 GGGCGCGCAAAAGAAAAAC 59.437 52.632 34.42 10.96 0.00 2.43
730 739 7.308649 GCAAAAGAAAAACCCACAAACCTAAAA 60.309 33.333 0.00 0.00 0.00 1.52
740 749 8.046294 ACCCACAAACCTAAAATTTTGAAAAC 57.954 30.769 13.76 0.00 36.41 2.43
801 810 7.182060 GGCCCTAGATTTTCCATGGATAAATA 58.818 38.462 23.41 17.21 0.00 1.40
809 818 9.559958 GATTTTCCATGGATAAATAATGTAGCG 57.440 33.333 23.41 0.00 0.00 4.26
832 841 3.296628 CCGTTGGATTTTGACAGAAACG 58.703 45.455 0.00 0.00 38.80 3.60
835 844 4.024725 CGTTGGATTTTGACAGAAACGGTA 60.025 41.667 0.00 0.00 36.27 4.02
836 845 5.449304 GTTGGATTTTGACAGAAACGGTAG 58.551 41.667 0.00 0.00 0.00 3.18
837 846 4.963373 TGGATTTTGACAGAAACGGTAGA 58.037 39.130 0.00 0.00 0.00 2.59
838 847 4.994852 TGGATTTTGACAGAAACGGTAGAG 59.005 41.667 0.00 0.00 0.00 2.43
839 848 5.221561 TGGATTTTGACAGAAACGGTAGAGA 60.222 40.000 0.00 0.00 0.00 3.10
840 849 5.348997 GGATTTTGACAGAAACGGTAGAGAG 59.651 44.000 0.00 0.00 0.00 3.20
900 911 4.508662 AGGCTCTACACTTTCAGTTATGC 58.491 43.478 0.00 0.00 0.00 3.14
976 1494 3.621715 CCTCCCGCTTCTATTTAACACAC 59.378 47.826 0.00 0.00 0.00 3.82
977 1495 3.602483 TCCCGCTTCTATTTAACACACC 58.398 45.455 0.00 0.00 0.00 4.16
1023 1544 2.625790 TCCATCCAAACCAAAAACCTCG 59.374 45.455 0.00 0.00 0.00 4.63
1026 1547 0.461961 CCAAACCAAAAACCTCGCCA 59.538 50.000 0.00 0.00 0.00 5.69
1028 1549 1.136110 CAAACCAAAAACCTCGCCACT 59.864 47.619 0.00 0.00 0.00 4.00
1029 1550 1.480789 AACCAAAAACCTCGCCACTT 58.519 45.000 0.00 0.00 0.00 3.16
1032 1553 1.318576 CAAAAACCTCGCCACTTCCT 58.681 50.000 0.00 0.00 0.00 3.36
1034 1555 0.472471 AAAACCTCGCCACTTCCTCA 59.528 50.000 0.00 0.00 0.00 3.86
1119 1656 4.624364 TGCCAGTGCAGTGACCGG 62.624 66.667 23.34 7.20 44.23 5.28
1380 1924 4.080863 ACCAGAAGAGAGAGAGAGAGAGAC 60.081 50.000 0.00 0.00 0.00 3.36
1381 1925 4.115516 CAGAAGAGAGAGAGAGAGAGACG 58.884 52.174 0.00 0.00 0.00 4.18
1544 2098 2.682155 GCAGCAGCTAGGTTAGTTCT 57.318 50.000 0.00 0.00 37.91 3.01
1557 2111 8.620416 GCTAGGTTAGTTCTTAACTACCTCTAC 58.380 40.741 16.97 6.96 43.30 2.59
1566 2120 6.532826 TCTTAACTACCTCTACCTAGCTAGC 58.467 44.000 15.74 6.62 0.00 3.42
1569 2123 6.707273 AACTACCTCTACCTAGCTAGCTAT 57.293 41.667 24.36 13.50 0.00 2.97
1570 2124 6.303903 ACTACCTCTACCTAGCTAGCTATC 57.696 45.833 24.36 0.00 0.00 2.08
1571 2125 6.027482 ACTACCTCTACCTAGCTAGCTATCT 58.973 44.000 24.36 14.41 0.00 1.98
1572 2126 7.191210 ACTACCTCTACCTAGCTAGCTATCTA 58.809 42.308 24.36 14.74 0.00 1.98
1573 2127 6.555463 ACCTCTACCTAGCTAGCTATCTAG 57.445 45.833 24.36 21.92 44.03 2.43
1635 2190 7.809806 CCTAGATCACAAAATCAACCAAACTTC 59.190 37.037 0.00 0.00 0.00 3.01
1696 2251 5.500234 TGCAGGCCAGTAATATGATATTCC 58.500 41.667 5.01 0.00 0.00 3.01
1705 2260 9.273016 CCAGTAATATGATATTCCGAACTGTTT 57.727 33.333 17.75 0.00 32.00 2.83
1714 2269 2.244695 TCCGAACTGTTTCCTCTGCTA 58.755 47.619 0.00 0.00 0.00 3.49
1721 2283 6.035112 CGAACTGTTTCCTCTGCTACTATTTC 59.965 42.308 0.00 0.00 0.00 2.17
1731 2293 6.238320 CCTCTGCTACTATTTCTTTGACATGC 60.238 42.308 0.00 0.00 0.00 4.06
1738 2300 1.896220 TTCTTTGACATGCGCTTCCT 58.104 45.000 9.73 0.00 0.00 3.36
1748 2310 4.202441 ACATGCGCTTCCTCTATTTCATT 58.798 39.130 9.73 0.00 0.00 2.57
1751 2313 6.318648 ACATGCGCTTCCTCTATTTCATTTTA 59.681 34.615 9.73 0.00 0.00 1.52
1753 2315 5.065988 TGCGCTTCCTCTATTTCATTTTACC 59.934 40.000 9.73 0.00 0.00 2.85
1754 2316 5.738370 CGCTTCCTCTATTTCATTTTACCG 58.262 41.667 0.00 0.00 0.00 4.02
1755 2317 5.293569 CGCTTCCTCTATTTCATTTTACCGT 59.706 40.000 0.00 0.00 0.00 4.83
1769 2331 6.869913 TCATTTTACCGTCGAGACACTTATTT 59.130 34.615 4.02 0.00 0.00 1.40
1782 2344 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
1783 2345 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
1784 2346 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
1786 2350 0.978907 TTTTGGGACGGAGGGAGTAC 59.021 55.000 0.00 0.00 0.00 2.73
1788 2352 1.002069 TTGGGACGGAGGGAGTACTA 58.998 55.000 0.00 0.00 0.00 1.82
1801 2365 4.707105 GGGAGTACTACTACTCTCTCCAC 58.293 52.174 4.77 0.00 44.45 4.02
1802 2366 4.409901 GGGAGTACTACTACTCTCTCCACT 59.590 50.000 4.77 0.00 44.45 4.00
1803 2367 5.602145 GGGAGTACTACTACTCTCTCCACTA 59.398 48.000 4.77 0.00 44.45 2.74
1808 2372 5.993055 ACTACTACTCTCTCCACTAGTTCC 58.007 45.833 0.00 0.00 0.00 3.62
1812 2376 4.931027 ACTCTCTCCACTAGTTCCTGTA 57.069 45.455 0.00 0.00 0.00 2.74
1813 2377 4.850680 ACTCTCTCCACTAGTTCCTGTAG 58.149 47.826 0.00 0.00 0.00 2.74
1814 2378 4.290196 ACTCTCTCCACTAGTTCCTGTAGT 59.710 45.833 0.00 0.00 0.00 2.73
1815 2379 4.846040 TCTCTCCACTAGTTCCTGTAGTC 58.154 47.826 0.00 0.00 0.00 2.59
1835 2399 9.545611 TGTAGTCGTTTTAGTTCAAAGTTTTTC 57.454 29.630 0.00 0.00 0.00 2.29
1886 2455 3.691118 TGTATGCTTTGGTGAATCTGAGC 59.309 43.478 0.00 0.00 0.00 4.26
1887 2456 2.574006 TGCTTTGGTGAATCTGAGCT 57.426 45.000 0.00 0.00 0.00 4.09
1888 2457 2.156917 TGCTTTGGTGAATCTGAGCTG 58.843 47.619 0.00 0.00 0.00 4.24
1889 2458 2.224597 TGCTTTGGTGAATCTGAGCTGA 60.225 45.455 0.00 0.00 0.00 4.26
1890 2459 2.419324 GCTTTGGTGAATCTGAGCTGAG 59.581 50.000 0.00 0.00 0.00 3.35
1891 2460 3.867600 GCTTTGGTGAATCTGAGCTGAGA 60.868 47.826 5.02 5.02 0.00 3.27
1892 2461 3.325293 TTGGTGAATCTGAGCTGAGAC 57.675 47.619 4.55 0.00 0.00 3.36
1893 2462 2.533916 TGGTGAATCTGAGCTGAGACT 58.466 47.619 4.55 0.00 0.00 3.24
1894 2463 2.902486 TGGTGAATCTGAGCTGAGACTT 59.098 45.455 4.55 1.27 0.00 3.01
1895 2464 3.326006 TGGTGAATCTGAGCTGAGACTTT 59.674 43.478 4.55 0.00 0.00 2.66
1896 2465 3.683822 GGTGAATCTGAGCTGAGACTTTG 59.316 47.826 4.55 0.00 0.00 2.77
1897 2466 4.314121 GTGAATCTGAGCTGAGACTTTGT 58.686 43.478 4.55 0.00 0.00 2.83
1898 2467 5.473931 GTGAATCTGAGCTGAGACTTTGTA 58.526 41.667 4.55 0.00 0.00 2.41
1899 2468 6.105333 GTGAATCTGAGCTGAGACTTTGTAT 58.895 40.000 4.55 0.00 0.00 2.29
1900 2469 6.593382 GTGAATCTGAGCTGAGACTTTGTATT 59.407 38.462 4.55 0.00 0.00 1.89
1901 2470 6.815641 TGAATCTGAGCTGAGACTTTGTATTC 59.184 38.462 4.55 4.32 0.00 1.75
2089 2659 9.820229 CTTTCTTTTGTTTTTGAAAGGTTAACC 57.180 29.630 17.41 17.41 40.68 2.85
2161 2731 9.720769 TTGGGTCTACTTCTTTAATCTTTAGTG 57.279 33.333 0.00 0.00 0.00 2.74
2177 2747 7.709269 TCTTTAGTGCTACTAACAAACTGTG 57.291 36.000 7.87 0.00 40.12 3.66
2244 2814 5.768164 TGGGTCCAGTTCTTTAACAAATCTC 59.232 40.000 0.00 0.00 38.12 2.75
2273 2845 9.598517 CTCTAGATTGAGATAAATAATCTGGGC 57.401 37.037 0.00 0.00 45.35 5.36
2276 2848 7.102346 AGATTGAGATAAATAATCTGGGCTCG 58.898 38.462 0.00 0.00 45.35 5.03
2301 2873 3.847602 CCGGCTCCTCTGCTCTGG 61.848 72.222 0.00 0.00 0.00 3.86
2330 2902 5.356882 TCTTGTTTATTTTCTCACTGCCG 57.643 39.130 0.00 0.00 0.00 5.69
2440 3024 1.080435 GCGGCGAGGTACCAAACTAC 61.080 60.000 15.94 0.00 0.00 2.73
2454 3038 0.320771 AACTACCTGCTGCTTCACCG 60.321 55.000 0.00 0.00 0.00 4.94
2560 3201 5.476945 CCACTTCTTACAAGCTTATTTGGGT 59.523 40.000 0.00 0.00 32.32 4.51
2579 3220 3.927142 GGGTGTTCAGTCTGAAATACTCG 59.073 47.826 16.86 0.00 38.22 4.18
2712 3354 2.426738 CACTTGCCCACTTGTCAAAAGA 59.573 45.455 0.54 0.00 0.00 2.52
2715 3357 1.214175 TGCCCACTTGTCAAAAGAGGA 59.786 47.619 0.00 0.00 30.82 3.71
2754 3396 4.649674 TCTTCCACGTTCTAGCATTCCTAT 59.350 41.667 0.00 0.00 0.00 2.57
2788 3431 8.369218 CCAAGTATGGGATAATTGCAATTTTC 57.631 34.615 28.45 26.83 43.51 2.29
2802 3467 4.213270 TGCAATTTTCTCAACGTACCTCAG 59.787 41.667 0.00 0.00 0.00 3.35
2811 3476 6.931838 TCTCAACGTACCTCAGTTTGATATT 58.068 36.000 0.00 0.00 0.00 1.28
2818 3483 7.093902 ACGTACCTCAGTTTGATATTTCTCTCA 60.094 37.037 0.00 0.00 0.00 3.27
2819 3484 7.923344 CGTACCTCAGTTTGATATTTCTCTCAT 59.077 37.037 0.00 0.00 0.00 2.90
2867 3533 2.997986 TCTTGGAAATTACGAGCGGTTC 59.002 45.455 0.00 0.00 0.00 3.62
3004 3678 9.575868 TCCAGTGAAAATTTGTGGTTTATACTA 57.424 29.630 0.00 0.00 0.00 1.82
3090 3764 4.141733 CCATGGGACCCACAAATAATTTCC 60.142 45.833 17.78 0.00 35.80 3.13
3249 3923 9.887629 ATGCTATCACTTAGATTTGATATCCTG 57.112 33.333 0.00 0.00 38.19 3.86
3265 3943 6.763135 TGATATCCTGCTTACAAGACATGTTC 59.237 38.462 0.00 0.00 43.63 3.18
3432 4110 2.098443 GGAAAAACTGTTCAGGTGCGAA 59.902 45.455 4.82 0.00 0.00 4.70
3534 4212 6.884836 ACTAAGTCTTCTTTTGTCAGGTTGTT 59.115 34.615 0.00 0.00 35.36 2.83
3588 4266 0.321210 AACGTGTGGCGATGAATCCA 60.321 50.000 0.00 0.00 44.77 3.41
3690 4368 0.318955 GCAGCAAACCATCGCACTTT 60.319 50.000 0.00 0.00 0.00 2.66
3873 4552 5.097742 TGAAGTCCTTCAGTGTTTTCTCA 57.902 39.130 5.64 0.00 43.90 3.27
3877 4556 7.773224 TGAAGTCCTTCAGTGTTTTCTCAATTA 59.227 33.333 5.64 0.00 43.90 1.40
3878 4557 8.697507 AAGTCCTTCAGTGTTTTCTCAATTAT 57.302 30.769 0.00 0.00 0.00 1.28
3879 4558 8.329203 AGTCCTTCAGTGTTTTCTCAATTATC 57.671 34.615 0.00 0.00 0.00 1.75
3880 4559 7.118390 AGTCCTTCAGTGTTTTCTCAATTATCG 59.882 37.037 0.00 0.00 0.00 2.92
3881 4560 7.117812 GTCCTTCAGTGTTTTCTCAATTATCGA 59.882 37.037 0.00 0.00 0.00 3.59
3882 4561 7.659799 TCCTTCAGTGTTTTCTCAATTATCGAA 59.340 33.333 0.00 0.00 0.00 3.71
4110 4800 7.881142 AGTCATTTTCATTTACATCGTTTCCA 58.119 30.769 0.00 0.00 0.00 3.53
4286 4976 1.985895 CCTACCCCCTGTTTTCAGTCT 59.014 52.381 0.00 0.00 45.68 3.24
4428 5118 7.039082 TCCTTTTATTGCAAGGCTACTGAAAAT 60.039 33.333 4.94 0.00 40.77 1.82
4630 5320 7.875316 AATGTGCTTAGCTAACGATATGTAG 57.125 36.000 5.60 0.00 0.00 2.74
4698 5388 1.228337 GGGCCTTTGGTGGTACGTT 60.228 57.895 0.84 0.00 0.00 3.99
4764 5454 3.512329 TCGGTGTACTTAGCATTCCTTCA 59.488 43.478 0.00 0.00 0.00 3.02
4917 5607 2.309528 TGTAAGCCTTATCTGGTGCG 57.690 50.000 0.00 0.00 0.00 5.34
4918 5608 0.938008 GTAAGCCTTATCTGGTGCGC 59.062 55.000 0.00 0.00 0.00 6.09
4923 5613 2.014128 GCCTTATCTGGTGCGCTAAAA 58.986 47.619 9.73 0.00 0.00 1.52
4937 5627 4.384247 TGCGCTAAAAATTATTGTGCACAC 59.616 37.500 21.56 3.02 38.88 3.82
5046 5736 8.865590 TGACATTTATTCATGCATGATTCAAG 57.134 30.769 29.13 18.81 36.56 3.02
5051 5741 9.961265 ATTTATTCATGCATGATTCAAGTACTG 57.039 29.630 29.13 0.00 36.56 2.74
5072 5764 0.395173 AGTGTTCCTTGGCGTGGTTT 60.395 50.000 0.00 0.00 0.00 3.27
5085 5777 3.251487 GGCGTGGTTTTTAGCTTTGTAGA 59.749 43.478 0.00 0.00 0.00 2.59
5103 5795 9.831737 CTTTGTAGACATTTAGTGAAATCTTGG 57.168 33.333 0.00 0.00 32.73 3.61
5106 5798 9.739276 TGTAGACATTTAGTGAAATCTTGGAAT 57.261 29.630 0.00 0.00 32.73 3.01
5114 5806 6.642733 AGTGAAATCTTGGAATCTCCCTTA 57.357 37.500 0.00 0.00 35.03 2.69
5115 5807 7.218314 AGTGAAATCTTGGAATCTCCCTTAT 57.782 36.000 0.00 0.00 35.03 1.73
5116 5808 7.646884 AGTGAAATCTTGGAATCTCCCTTATT 58.353 34.615 0.00 0.00 35.03 1.40
5117 5809 8.118600 AGTGAAATCTTGGAATCTCCCTTATTT 58.881 33.333 0.00 0.00 35.03 1.40
5118 5810 8.753133 GTGAAATCTTGGAATCTCCCTTATTTT 58.247 33.333 0.00 0.00 35.03 1.82
5119 5811 9.325248 TGAAATCTTGGAATCTCCCTTATTTTT 57.675 29.630 0.00 0.00 35.03 1.94
5133 5825 5.064834 CCCTTATTTTTGAGAGAACGGCTAC 59.935 44.000 0.00 0.00 0.00 3.58
5134 5826 5.642063 CCTTATTTTTGAGAGAACGGCTACA 59.358 40.000 0.00 0.00 0.00 2.74
5135 5827 6.402226 CCTTATTTTTGAGAGAACGGCTACAC 60.402 42.308 0.00 0.00 0.00 2.90
5136 5828 3.462483 TTTTGAGAGAACGGCTACACA 57.538 42.857 0.00 0.00 0.00 3.72
5138 5830 3.678056 TTGAGAGAACGGCTACACATT 57.322 42.857 0.00 0.00 0.00 2.71
5139 5831 3.678056 TGAGAGAACGGCTACACATTT 57.322 42.857 0.00 0.00 0.00 2.32
5140 5832 4.002906 TGAGAGAACGGCTACACATTTT 57.997 40.909 0.00 0.00 0.00 1.82
5141 5833 4.385825 TGAGAGAACGGCTACACATTTTT 58.614 39.130 0.00 0.00 0.00 1.94
5142 5834 4.451096 TGAGAGAACGGCTACACATTTTTC 59.549 41.667 0.00 0.00 0.00 2.29
5149 5851 2.351350 GGCTACACATTTTTCGGGTGTG 60.351 50.000 6.89 3.42 44.76 3.82
5163 5865 5.873179 TCGGGTGTGATCAAGTTTATTTC 57.127 39.130 0.00 0.00 0.00 2.17
5194 5896 0.675837 GTCAGGCTCTTCTGCATGCA 60.676 55.000 21.29 21.29 43.39 3.96
5307 6012 5.947663 ACCGGATATCATTTTAATCCCACA 58.052 37.500 9.46 0.00 36.59 4.17
5419 6134 8.917088 AGGTAAGCACTGCATATATTTTCAAAT 58.083 29.630 3.30 0.00 0.00 2.32
5424 6139 7.384115 AGCACTGCATATATTTTCAAATGATGC 59.616 33.333 18.33 18.33 42.84 3.91
5427 6142 7.870954 ACTGCATATATTTTCAAATGATGCCAG 59.129 33.333 20.41 18.95 42.39 4.85
5695 6410 6.058183 GTGTTATCTTCATGCCAGAGGTAAT 58.942 40.000 0.00 0.00 0.00 1.89
5704 6419 4.040936 TGCCAGAGGTAATTTGCCTTAA 57.959 40.909 7.52 0.00 36.29 1.85
5706 6421 3.181500 GCCAGAGGTAATTTGCCTTAACG 60.181 47.826 7.52 0.00 36.29 3.18
5732 6447 9.774742 GGCTATTCTGTTCAAGTAGTTTATTTG 57.225 33.333 0.00 0.00 0.00 2.32
5745 6460 7.721402 AGTAGTTTATTTGTGTGAAATTGCCA 58.279 30.769 0.00 0.00 0.00 4.92
5761 6476 1.340308 TGCCATGTGCTTACTCTGCAT 60.340 47.619 7.54 0.00 42.69 3.96
5765 6480 3.693085 CCATGTGCTTACTCTGCATCTTT 59.307 43.478 0.00 0.00 42.69 2.52
5766 6481 4.438336 CCATGTGCTTACTCTGCATCTTTG 60.438 45.833 0.00 0.00 42.69 2.77
5768 6483 4.582869 TGTGCTTACTCTGCATCTTTGAT 58.417 39.130 0.00 0.00 42.69 2.57
5770 6485 6.351711 TGTGCTTACTCTGCATCTTTGATAT 58.648 36.000 0.00 0.00 42.69 1.63
5774 6489 6.017275 GCTTACTCTGCATCTTTGATATTGCT 60.017 38.462 0.00 0.00 36.10 3.91
5859 6574 2.361757 CCAGGTCAACAACTGCAAATCA 59.638 45.455 0.00 0.00 33.43 2.57
5987 6964 5.065602 TGCTAACTATGTAGACGAACGACAT 59.934 40.000 14.07 14.07 44.51 3.06
6224 7505 5.170748 GCACCAATATTTTTGTTCCTCCAG 58.829 41.667 0.00 0.00 0.00 3.86
6252 7533 7.377766 TCTAATGTGAAATGCTTTACTGGAC 57.622 36.000 0.00 0.00 0.00 4.02
6390 7680 4.465660 ACTGCACTTCACTCTGTCTGATAT 59.534 41.667 0.00 0.00 0.00 1.63
6391 7681 5.046735 ACTGCACTTCACTCTGTCTGATATT 60.047 40.000 0.00 0.00 0.00 1.28
6421 7711 2.594654 CGTCTCTTTCCTTTCGATGTCG 59.405 50.000 0.00 0.00 41.45 4.35
6508 7798 2.838736 ACATGTACAGGATTGATCGCC 58.161 47.619 15.54 0.00 0.00 5.54
6553 7843 3.793144 CTTCAGCGCACTTCCGGC 61.793 66.667 11.47 0.00 0.00 6.13
6602 7892 3.162154 GTCCCGGAGCCCCTAAGG 61.162 72.222 0.73 0.00 39.47 2.69
6634 7924 3.509137 GAACGGCCTGGTGTCGACA 62.509 63.158 15.76 15.76 0.00 4.35
6673 7963 4.063689 GCAGTATTCACATCTAGCAGCAT 58.936 43.478 0.00 0.00 0.00 3.79
6683 7973 1.437772 CTAGCAGCATGGCAGCAGAC 61.438 60.000 8.29 0.00 43.44 3.51
7058 8364 8.824159 AATGATTATAAGCAGCTACTGTAGTG 57.176 34.615 15.71 12.94 33.43 2.74
7065 8371 4.759782 AGCAGCTACTGTAGTGGTATTTG 58.240 43.478 15.71 5.46 33.43 2.32
7168 8486 7.560368 ACTATATAGCTGGGATGCTGTAATTC 58.440 38.462 9.78 0.00 43.87 2.17
7258 8586 5.007724 GTCTTTCGACCAAATGTGTTCTCTT 59.992 40.000 0.00 0.00 33.98 2.85
7259 8587 5.236478 TCTTTCGACCAAATGTGTTCTCTTC 59.764 40.000 0.00 0.00 0.00 2.87
7260 8588 4.336889 TCGACCAAATGTGTTCTCTTCT 57.663 40.909 0.00 0.00 0.00 2.85
7261 8589 4.307432 TCGACCAAATGTGTTCTCTTCTC 58.693 43.478 0.00 0.00 0.00 2.87
7262 8590 4.039245 TCGACCAAATGTGTTCTCTTCTCT 59.961 41.667 0.00 0.00 0.00 3.10
7289 8623 1.134753 TGCAGCTCTGTTTTTGGTGTG 59.865 47.619 0.00 0.00 0.00 3.82
7352 8698 3.280197 AAAAATTGCCTGCCACAAACT 57.720 38.095 0.00 0.00 0.00 2.66
7464 8818 5.600484 ACCCACAATTGTAAGACAAAATGGA 59.400 36.000 11.53 0.00 41.96 3.41
7509 8863 1.612950 CCTGATCTGAGCTCATACGCT 59.387 52.381 18.63 0.00 44.33 5.07
7510 8864 2.035704 CCTGATCTGAGCTCATACGCTT 59.964 50.000 18.63 0.00 41.08 4.68
7526 8880 0.796927 GCTTCCGCTGTTCAGGTAAC 59.203 55.000 1.97 0.00 38.67 2.50
7535 8889 1.891150 TGTTCAGGTAACGGTCTCTCC 59.109 52.381 0.00 0.00 41.30 3.71
7590 8945 1.720852 CAGTTGGCGCTTATTGCAAAC 59.279 47.619 7.64 0.00 43.06 2.93
7648 9003 5.663106 TCCTAGAGCTTGATATTTCAGGTGT 59.337 40.000 0.00 0.00 31.82 4.16
7828 9843 0.613260 AGTAAGGGCATCAACGCTGA 59.387 50.000 0.00 0.00 35.56 4.26
7829 9844 0.727398 GTAAGGGCATCAACGCTGAC 59.273 55.000 0.00 0.00 33.30 3.51
7926 9957 3.567585 TCAAATCGCATTTCAACTGACCA 59.432 39.130 0.00 0.00 0.00 4.02
7991 10022 7.573843 CGGATAGAAAATAGCACAAATCATCCC 60.574 40.741 0.00 0.00 0.00 3.85
7992 10023 5.505173 AGAAAATAGCACAAATCATCCCG 57.495 39.130 0.00 0.00 0.00 5.14
8002 10033 5.450412 GCACAAATCATCCCGACATAACATT 60.450 40.000 0.00 0.00 0.00 2.71
8070 10101 4.401519 CCAGATGCTCAACAAGATTTCCAT 59.598 41.667 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.463724 TCATTTTTGTTTGTCGGGCATTAAC 59.536 36.000 0.00 0.00 0.00 2.01
1 2 5.601662 TCATTTTTGTTTGTCGGGCATTAA 58.398 33.333 0.00 0.00 0.00 1.40
2 3 5.010112 TCTCATTTTTGTTTGTCGGGCATTA 59.990 36.000 0.00 0.00 0.00 1.90
3 4 4.057432 CTCATTTTTGTTTGTCGGGCATT 58.943 39.130 0.00 0.00 0.00 3.56
4 5 3.320541 TCTCATTTTTGTTTGTCGGGCAT 59.679 39.130 0.00 0.00 0.00 4.40
5 6 2.690497 TCTCATTTTTGTTTGTCGGGCA 59.310 40.909 0.00 0.00 0.00 5.36
6 7 3.243401 ACTCTCATTTTTGTTTGTCGGGC 60.243 43.478 0.00 0.00 0.00 6.13
7 8 4.202010 ACACTCTCATTTTTGTTTGTCGGG 60.202 41.667 0.00 0.00 0.00 5.14
8 9 4.920376 ACACTCTCATTTTTGTTTGTCGG 58.080 39.130 0.00 0.00 0.00 4.79
9 10 6.482835 TGTACACTCTCATTTTTGTTTGTCG 58.517 36.000 0.00 0.00 0.00 4.35
10 11 8.856490 AATGTACACTCTCATTTTTGTTTGTC 57.144 30.769 0.00 0.00 31.35 3.18
11 12 8.465999 TGAATGTACACTCTCATTTTTGTTTGT 58.534 29.630 5.83 0.00 34.92 2.83
12 13 8.854979 TGAATGTACACTCTCATTTTTGTTTG 57.145 30.769 5.83 0.00 34.92 2.93
13 14 8.902806 TCTGAATGTACACTCTCATTTTTGTTT 58.097 29.630 5.83 0.00 34.92 2.83
14 15 8.345565 GTCTGAATGTACACTCTCATTTTTGTT 58.654 33.333 5.83 0.00 34.92 2.83
15 16 7.307396 CGTCTGAATGTACACTCTCATTTTTGT 60.307 37.037 5.83 0.00 34.92 2.83
16 17 7.011773 CGTCTGAATGTACACTCTCATTTTTG 58.988 38.462 5.83 0.00 34.92 2.44
17 18 6.347725 GCGTCTGAATGTACACTCTCATTTTT 60.348 38.462 5.83 0.00 34.92 1.94
18 19 5.120830 GCGTCTGAATGTACACTCTCATTTT 59.879 40.000 5.83 0.00 34.92 1.82
19 20 4.627467 GCGTCTGAATGTACACTCTCATTT 59.373 41.667 5.83 0.00 34.92 2.32
20 21 4.177026 GCGTCTGAATGTACACTCTCATT 58.823 43.478 5.83 0.00 37.04 2.57
21 22 3.193479 TGCGTCTGAATGTACACTCTCAT 59.807 43.478 5.83 0.00 0.00 2.90
22 23 2.556622 TGCGTCTGAATGTACACTCTCA 59.443 45.455 5.83 5.10 0.00 3.27
23 24 3.217599 TGCGTCTGAATGTACACTCTC 57.782 47.619 5.83 0.51 0.00 3.20
24 25 3.660501 TTGCGTCTGAATGTACACTCT 57.339 42.857 5.83 0.00 0.00 3.24
25 26 4.725556 TTTTGCGTCTGAATGTACACTC 57.274 40.909 0.00 0.00 0.00 3.51
26 27 5.451908 CATTTTTGCGTCTGAATGTACACT 58.548 37.500 0.00 0.00 0.00 3.55
27 28 4.088496 GCATTTTTGCGTCTGAATGTACAC 59.912 41.667 0.00 0.00 33.25 2.90
28 29 4.225984 GCATTTTTGCGTCTGAATGTACA 58.774 39.130 0.00 0.00 33.25 2.90
29 30 3.608073 GGCATTTTTGCGTCTGAATGTAC 59.392 43.478 0.00 0.00 33.25 2.90
30 31 3.669290 CGGCATTTTTGCGTCTGAATGTA 60.669 43.478 0.00 0.00 33.25 2.29
31 32 2.676076 GGCATTTTTGCGTCTGAATGT 58.324 42.857 0.00 0.00 33.25 2.71
32 33 1.650153 CGGCATTTTTGCGTCTGAATG 59.350 47.619 0.00 0.00 35.24 2.67
33 34 1.402720 CCGGCATTTTTGCGTCTGAAT 60.403 47.619 0.00 0.00 35.24 2.57
34 35 0.039617 CCGGCATTTTTGCGTCTGAA 60.040 50.000 0.00 0.00 35.24 3.02
35 36 0.886938 TCCGGCATTTTTGCGTCTGA 60.887 50.000 0.00 0.00 35.24 3.27
36 37 0.729140 GTCCGGCATTTTTGCGTCTG 60.729 55.000 0.00 0.00 35.24 3.51
37 38 1.579429 GTCCGGCATTTTTGCGTCT 59.421 52.632 0.00 0.00 35.24 4.18
38 39 1.795962 CGTCCGGCATTTTTGCGTC 60.796 57.895 0.00 0.00 35.24 5.19
39 40 2.254051 CGTCCGGCATTTTTGCGT 59.746 55.556 0.00 0.00 35.24 5.24
40 41 2.465097 TTCCGTCCGGCATTTTTGCG 62.465 55.000 0.00 0.00 35.24 4.85
41 42 0.108851 ATTCCGTCCGGCATTTTTGC 60.109 50.000 0.00 0.00 34.68 3.68
42 43 2.680841 TCTATTCCGTCCGGCATTTTTG 59.319 45.455 0.00 0.00 34.68 2.44
43 44 2.993937 TCTATTCCGTCCGGCATTTTT 58.006 42.857 0.00 0.00 34.68 1.94
44 45 2.702592 TCTATTCCGTCCGGCATTTT 57.297 45.000 0.00 0.00 34.68 1.82
45 46 2.930826 ATCTATTCCGTCCGGCATTT 57.069 45.000 0.00 0.00 34.68 2.32
46 47 2.368875 AGAATCTATTCCGTCCGGCATT 59.631 45.455 0.00 0.00 37.51 3.56
47 48 1.971357 AGAATCTATTCCGTCCGGCAT 59.029 47.619 0.00 0.00 37.51 4.40
48 49 1.410004 AGAATCTATTCCGTCCGGCA 58.590 50.000 0.00 0.00 37.51 5.69
49 50 2.135933 CAAGAATCTATTCCGTCCGGC 58.864 52.381 0.00 0.00 37.51 6.13
50 51 2.102588 ACCAAGAATCTATTCCGTCCGG 59.897 50.000 0.00 0.00 37.51 5.14
51 52 3.123804 CACCAAGAATCTATTCCGTCCG 58.876 50.000 0.00 0.00 37.51 4.79
52 53 4.402056 TCACCAAGAATCTATTCCGTCC 57.598 45.455 0.00 0.00 37.51 4.79
53 54 5.294552 CCTTTCACCAAGAATCTATTCCGTC 59.705 44.000 0.00 0.00 37.51 4.79
54 55 5.186198 CCTTTCACCAAGAATCTATTCCGT 58.814 41.667 0.00 0.00 37.51 4.69
55 56 4.035675 GCCTTTCACCAAGAATCTATTCCG 59.964 45.833 0.00 0.00 37.51 4.30
56 57 4.035675 CGCCTTTCACCAAGAATCTATTCC 59.964 45.833 0.00 0.00 37.51 3.01
57 58 4.035675 CCGCCTTTCACCAAGAATCTATTC 59.964 45.833 0.00 0.00 35.83 1.75
58 59 3.947834 CCGCCTTTCACCAAGAATCTATT 59.052 43.478 0.00 0.00 35.83 1.73
59 60 3.545703 CCGCCTTTCACCAAGAATCTAT 58.454 45.455 0.00 0.00 35.83 1.98
60 61 2.939640 GCCGCCTTTCACCAAGAATCTA 60.940 50.000 0.00 0.00 35.83 1.98
61 62 1.826385 CCGCCTTTCACCAAGAATCT 58.174 50.000 0.00 0.00 35.83 2.40
62 63 0.171231 GCCGCCTTTCACCAAGAATC 59.829 55.000 0.00 0.00 35.83 2.52
63 64 0.251341 AGCCGCCTTTCACCAAGAAT 60.251 50.000 0.00 0.00 35.83 2.40
64 65 0.398696 TAGCCGCCTTTCACCAAGAA 59.601 50.000 0.00 0.00 33.80 2.52
65 66 0.398696 TTAGCCGCCTTTCACCAAGA 59.601 50.000 0.00 0.00 33.80 3.02
66 67 0.804989 CTTAGCCGCCTTTCACCAAG 59.195 55.000 0.00 0.00 0.00 3.61
67 68 0.109723 ACTTAGCCGCCTTTCACCAA 59.890 50.000 0.00 0.00 0.00 3.67
68 69 0.321298 GACTTAGCCGCCTTTCACCA 60.321 55.000 0.00 0.00 0.00 4.17
69 70 0.036294 AGACTTAGCCGCCTTTCACC 60.036 55.000 0.00 0.00 0.00 4.02
70 71 1.360820 GAGACTTAGCCGCCTTTCAC 58.639 55.000 0.00 0.00 0.00 3.18
71 72 0.249398 GGAGACTTAGCCGCCTTTCA 59.751 55.000 0.00 0.00 0.00 2.69
72 73 0.462225 GGGAGACTTAGCCGCCTTTC 60.462 60.000 0.00 0.00 0.00 2.62
73 74 1.198759 TGGGAGACTTAGCCGCCTTT 61.199 55.000 0.00 0.00 0.00 3.11
74 75 1.612442 TGGGAGACTTAGCCGCCTT 60.612 57.895 0.00 0.00 0.00 4.35
75 76 2.038975 TGGGAGACTTAGCCGCCT 59.961 61.111 0.00 0.00 0.00 5.52
76 77 2.187163 GTGGGAGACTTAGCCGCC 59.813 66.667 0.00 0.00 0.00 6.13
77 78 2.187163 GGTGGGAGACTTAGCCGC 59.813 66.667 0.00 0.00 0.00 6.53
78 79 1.550130 TTGGGTGGGAGACTTAGCCG 61.550 60.000 0.00 0.00 37.69 5.52
79 80 0.696501 TTTGGGTGGGAGACTTAGCC 59.303 55.000 0.00 0.00 36.19 3.93
80 81 1.351350 ACTTTGGGTGGGAGACTTAGC 59.649 52.381 0.00 0.00 0.00 3.09
81 82 2.353803 CGACTTTGGGTGGGAGACTTAG 60.354 54.545 0.00 0.00 0.00 2.18
82 83 1.621814 CGACTTTGGGTGGGAGACTTA 59.378 52.381 0.00 0.00 0.00 2.24
83 84 0.396811 CGACTTTGGGTGGGAGACTT 59.603 55.000 0.00 0.00 0.00 3.01
84 85 2.058675 CGACTTTGGGTGGGAGACT 58.941 57.895 0.00 0.00 0.00 3.24
85 86 1.671379 GCGACTTTGGGTGGGAGAC 60.671 63.158 0.00 0.00 0.00 3.36
86 87 1.701031 TTGCGACTTTGGGTGGGAGA 61.701 55.000 0.00 0.00 0.00 3.71
87 88 0.821711 TTTGCGACTTTGGGTGGGAG 60.822 55.000 0.00 0.00 0.00 4.30
88 89 0.178975 ATTTGCGACTTTGGGTGGGA 60.179 50.000 0.00 0.00 0.00 4.37
89 90 0.038343 CATTTGCGACTTTGGGTGGG 60.038 55.000 0.00 0.00 0.00 4.61
90 91 0.038343 CCATTTGCGACTTTGGGTGG 60.038 55.000 0.00 0.00 0.00 4.61
91 92 0.958091 TCCATTTGCGACTTTGGGTG 59.042 50.000 0.00 0.00 0.00 4.61
92 93 1.698506 TTCCATTTGCGACTTTGGGT 58.301 45.000 0.00 0.00 0.00 4.51
93 94 2.810439 TTTCCATTTGCGACTTTGGG 57.190 45.000 0.00 0.00 0.00 4.12
94 95 4.152223 GGAATTTTCCATTTGCGACTTTGG 59.848 41.667 4.43 0.00 46.76 3.28
95 96 5.268107 GGAATTTTCCATTTGCGACTTTG 57.732 39.130 4.43 0.00 46.76 2.77
109 110 9.092876 CTCACAATGACTCTAGTAGGAATTTTC 57.907 37.037 0.00 0.00 0.00 2.29
110 111 8.816894 TCTCACAATGACTCTAGTAGGAATTTT 58.183 33.333 0.00 0.00 0.00 1.82
111 112 8.254508 GTCTCACAATGACTCTAGTAGGAATTT 58.745 37.037 0.00 0.00 0.00 1.82
112 113 7.147811 GGTCTCACAATGACTCTAGTAGGAATT 60.148 40.741 0.00 0.00 35.04 2.17
113 114 6.322712 GGTCTCACAATGACTCTAGTAGGAAT 59.677 42.308 0.00 0.00 35.04 3.01
114 115 5.652891 GGTCTCACAATGACTCTAGTAGGAA 59.347 44.000 0.00 0.00 35.04 3.36
115 116 5.194432 GGTCTCACAATGACTCTAGTAGGA 58.806 45.833 0.00 0.00 35.04 2.94
116 117 4.035792 CGGTCTCACAATGACTCTAGTAGG 59.964 50.000 0.00 0.00 35.04 3.18
117 118 4.636648 ACGGTCTCACAATGACTCTAGTAG 59.363 45.833 0.00 0.00 35.04 2.57
118 119 4.586884 ACGGTCTCACAATGACTCTAGTA 58.413 43.478 0.00 0.00 35.04 1.82
119 120 3.422796 ACGGTCTCACAATGACTCTAGT 58.577 45.455 0.00 0.00 35.04 2.57
120 121 4.169508 CAACGGTCTCACAATGACTCTAG 58.830 47.826 0.00 0.00 35.04 2.43
121 122 3.572682 ACAACGGTCTCACAATGACTCTA 59.427 43.478 0.00 0.00 35.04 2.43
122 123 2.365617 ACAACGGTCTCACAATGACTCT 59.634 45.455 0.00 0.00 35.04 3.24
123 124 2.731976 GACAACGGTCTCACAATGACTC 59.268 50.000 0.00 0.00 40.99 3.36
124 125 2.102420 TGACAACGGTCTCACAATGACT 59.898 45.455 0.00 0.00 44.61 3.41
125 126 2.479837 TGACAACGGTCTCACAATGAC 58.520 47.619 0.00 0.00 44.61 3.06
126 127 2.869801 GTTGACAACGGTCTCACAATGA 59.130 45.455 1.86 0.00 44.61 2.57
127 128 2.032030 GGTTGACAACGGTCTCACAATG 60.032 50.000 12.07 0.00 44.61 2.82
128 129 2.218603 GGTTGACAACGGTCTCACAAT 58.781 47.619 12.07 0.00 44.61 2.71
129 130 1.066071 TGGTTGACAACGGTCTCACAA 60.066 47.619 12.07 0.00 44.61 3.33
130 131 0.537653 TGGTTGACAACGGTCTCACA 59.462 50.000 12.07 0.08 44.61 3.58
131 132 1.878953 ATGGTTGACAACGGTCTCAC 58.121 50.000 12.07 0.00 44.61 3.51
132 133 2.489971 GAATGGTTGACAACGGTCTCA 58.510 47.619 12.07 4.64 44.61 3.27
133 134 1.459592 CGAATGGTTGACAACGGTCTC 59.540 52.381 12.07 5.49 44.61 3.36
134 135 1.202604 ACGAATGGTTGACAACGGTCT 60.203 47.619 12.07 0.00 44.61 3.85
135 136 1.193874 GACGAATGGTTGACAACGGTC 59.806 52.381 12.07 9.84 44.57 4.79
136 137 1.202604 AGACGAATGGTTGACAACGGT 60.203 47.619 12.07 5.05 37.30 4.83
137 138 1.459592 GAGACGAATGGTTGACAACGG 59.540 52.381 12.07 2.10 37.30 4.44
138 139 2.404215 AGAGACGAATGGTTGACAACG 58.596 47.619 12.07 3.10 38.33 4.10
139 140 3.927142 CCTAGAGACGAATGGTTGACAAC 59.073 47.826 9.97 9.97 0.00 3.32
140 141 3.616560 GCCTAGAGACGAATGGTTGACAA 60.617 47.826 0.00 0.00 0.00 3.18
141 142 2.094182 GCCTAGAGACGAATGGTTGACA 60.094 50.000 0.00 0.00 0.00 3.58
142 143 2.094182 TGCCTAGAGACGAATGGTTGAC 60.094 50.000 0.00 0.00 0.00 3.18
143 144 2.166459 CTGCCTAGAGACGAATGGTTGA 59.834 50.000 0.00 0.00 0.00 3.18
144 145 2.544685 CTGCCTAGAGACGAATGGTTG 58.455 52.381 0.00 0.00 0.00 3.77
145 146 1.134670 GCTGCCTAGAGACGAATGGTT 60.135 52.381 0.00 0.00 0.00 3.67
146 147 0.461961 GCTGCCTAGAGACGAATGGT 59.538 55.000 0.00 0.00 0.00 3.55
147 148 0.461548 TGCTGCCTAGAGACGAATGG 59.538 55.000 0.00 0.00 0.00 3.16
148 149 2.159184 TCTTGCTGCCTAGAGACGAATG 60.159 50.000 0.00 0.00 0.00 2.67
149 150 2.103373 TCTTGCTGCCTAGAGACGAAT 58.897 47.619 0.00 0.00 0.00 3.34
150 151 1.545841 TCTTGCTGCCTAGAGACGAA 58.454 50.000 0.00 0.00 0.00 3.85
151 152 1.769026 ATCTTGCTGCCTAGAGACGA 58.231 50.000 0.00 0.00 0.00 4.20
152 153 2.100584 AGAATCTTGCTGCCTAGAGACG 59.899 50.000 0.00 0.00 0.00 4.18
153 154 3.131933 TGAGAATCTTGCTGCCTAGAGAC 59.868 47.826 0.00 0.00 34.92 3.36
154 155 3.369175 TGAGAATCTTGCTGCCTAGAGA 58.631 45.455 0.00 0.00 34.92 3.10
155 156 3.815856 TGAGAATCTTGCTGCCTAGAG 57.184 47.619 0.00 0.00 34.92 2.43
156 157 4.162888 TCAATGAGAATCTTGCTGCCTAGA 59.837 41.667 0.00 0.16 34.92 2.43
157 158 4.272991 GTCAATGAGAATCTTGCTGCCTAG 59.727 45.833 0.00 0.00 34.92 3.02
158 159 4.194640 GTCAATGAGAATCTTGCTGCCTA 58.805 43.478 0.00 0.00 34.92 3.93
159 160 3.015327 GTCAATGAGAATCTTGCTGCCT 58.985 45.455 0.00 0.00 34.92 4.75
160 161 2.751259 TGTCAATGAGAATCTTGCTGCC 59.249 45.455 0.00 0.00 34.92 4.85
161 162 4.095932 TCATGTCAATGAGAATCTTGCTGC 59.904 41.667 0.00 0.00 37.91 5.25
162 163 5.813080 TCATGTCAATGAGAATCTTGCTG 57.187 39.130 0.00 0.00 37.91 4.41
163 164 6.829229 TTTCATGTCAATGAGAATCTTGCT 57.171 33.333 0.00 0.00 43.64 3.91
164 165 7.597743 ACTTTTTCATGTCAATGAGAATCTTGC 59.402 33.333 0.00 0.00 43.64 4.01
165 166 9.472361 AACTTTTTCATGTCAATGAGAATCTTG 57.528 29.630 0.00 0.00 43.64 3.02
168 169 9.565213 CCTAACTTTTTCATGTCAATGAGAATC 57.435 33.333 0.00 0.00 43.64 2.52
169 170 8.526147 CCCTAACTTTTTCATGTCAATGAGAAT 58.474 33.333 0.00 0.00 43.64 2.40
170 171 7.505585 ACCCTAACTTTTTCATGTCAATGAGAA 59.494 33.333 0.00 0.00 43.64 2.87
171 172 7.004086 ACCCTAACTTTTTCATGTCAATGAGA 58.996 34.615 0.00 0.00 43.64 3.27
172 173 7.219484 ACCCTAACTTTTTCATGTCAATGAG 57.781 36.000 0.00 0.00 43.64 2.90
173 174 7.595819 AACCCTAACTTTTTCATGTCAATGA 57.404 32.000 0.00 0.00 41.16 2.57
174 175 9.927668 ATAAACCCTAACTTTTTCATGTCAATG 57.072 29.630 0.00 0.00 34.88 2.82
176 177 9.974980 GAATAAACCCTAACTTTTTCATGTCAA 57.025 29.630 0.00 0.00 0.00 3.18
177 178 9.362151 AGAATAAACCCTAACTTTTTCATGTCA 57.638 29.630 0.00 0.00 0.00 3.58
186 187 9.700831 AGCATGATAAGAATAAACCCTAACTTT 57.299 29.630 0.00 0.00 0.00 2.66
201 202 9.187996 TGAAATGGTGATTTTAGCATGATAAGA 57.812 29.630 3.30 0.00 38.65 2.10
202 203 9.806203 TTGAAATGGTGATTTTAGCATGATAAG 57.194 29.630 3.30 0.00 38.65 1.73
204 205 9.970395 GATTGAAATGGTGATTTTAGCATGATA 57.030 29.630 0.00 0.00 38.65 2.15
205 206 8.479689 TGATTGAAATGGTGATTTTAGCATGAT 58.520 29.630 0.00 0.00 38.65 2.45
206 207 7.838884 TGATTGAAATGGTGATTTTAGCATGA 58.161 30.769 0.00 0.00 38.65 3.07
207 208 8.657074 ATGATTGAAATGGTGATTTTAGCATG 57.343 30.769 0.00 0.00 38.65 4.06
208 209 9.754382 GTATGATTGAAATGGTGATTTTAGCAT 57.246 29.630 0.00 0.00 40.24 3.79
209 210 8.747471 TGTATGATTGAAATGGTGATTTTAGCA 58.253 29.630 0.00 0.00 31.58 3.49
210 211 9.585099 TTGTATGATTGAAATGGTGATTTTAGC 57.415 29.630 0.00 0.00 31.58 3.09
213 214 8.938906 GCTTTGTATGATTGAAATGGTGATTTT 58.061 29.630 0.00 0.00 31.58 1.82
214 215 7.550196 GGCTTTGTATGATTGAAATGGTGATTT 59.450 33.333 0.00 0.00 34.29 2.17
215 216 7.043565 GGCTTTGTATGATTGAAATGGTGATT 58.956 34.615 0.00 0.00 0.00 2.57
216 217 6.407299 GGGCTTTGTATGATTGAAATGGTGAT 60.407 38.462 0.00 0.00 0.00 3.06
217 218 5.105392 GGGCTTTGTATGATTGAAATGGTGA 60.105 40.000 0.00 0.00 0.00 4.02
218 219 5.111293 GGGCTTTGTATGATTGAAATGGTG 58.889 41.667 0.00 0.00 0.00 4.17
219 220 4.776837 TGGGCTTTGTATGATTGAAATGGT 59.223 37.500 0.00 0.00 0.00 3.55
220 221 5.341872 TGGGCTTTGTATGATTGAAATGG 57.658 39.130 0.00 0.00 0.00 3.16
221 222 4.807304 GCTGGGCTTTGTATGATTGAAATG 59.193 41.667 0.00 0.00 0.00 2.32
222 223 4.440525 CGCTGGGCTTTGTATGATTGAAAT 60.441 41.667 0.00 0.00 0.00 2.17
223 224 3.119531 CGCTGGGCTTTGTATGATTGAAA 60.120 43.478 0.00 0.00 0.00 2.69
224 225 2.423185 CGCTGGGCTTTGTATGATTGAA 59.577 45.455 0.00 0.00 0.00 2.69
225 226 2.016318 CGCTGGGCTTTGTATGATTGA 58.984 47.619 0.00 0.00 0.00 2.57
226 227 1.534595 GCGCTGGGCTTTGTATGATTG 60.535 52.381 9.69 0.00 39.11 2.67
227 228 0.740737 GCGCTGGGCTTTGTATGATT 59.259 50.000 9.69 0.00 39.11 2.57
228 229 1.103398 GGCGCTGGGCTTTGTATGAT 61.103 55.000 16.51 0.00 42.94 2.45
229 230 1.748879 GGCGCTGGGCTTTGTATGA 60.749 57.895 16.51 0.00 42.94 2.15
230 231 2.045708 TGGCGCTGGGCTTTGTATG 61.046 57.895 16.51 0.00 42.94 2.39
231 232 2.046285 GTGGCGCTGGGCTTTGTAT 61.046 57.895 16.51 0.00 42.94 2.29
232 233 2.671619 GTGGCGCTGGGCTTTGTA 60.672 61.111 16.51 0.00 42.94 2.41
233 234 4.586235 AGTGGCGCTGGGCTTTGT 62.586 61.111 16.51 0.00 42.94 2.83
234 235 3.741476 GAGTGGCGCTGGGCTTTG 61.741 66.667 16.51 0.00 42.94 2.77
235 236 4.269523 TGAGTGGCGCTGGGCTTT 62.270 61.111 16.51 2.50 42.94 3.51
236 237 4.711949 CTGAGTGGCGCTGGGCTT 62.712 66.667 16.51 2.86 42.94 4.35
239 240 2.809861 ATTCACTGAGTGGCGCTGGG 62.810 60.000 13.33 0.00 33.87 4.45
240 241 1.376424 ATTCACTGAGTGGCGCTGG 60.376 57.895 13.33 0.13 33.87 4.85
241 242 0.671472 TCATTCACTGAGTGGCGCTG 60.671 55.000 13.33 5.64 33.87 5.18
242 243 0.035317 TTCATTCACTGAGTGGCGCT 59.965 50.000 13.33 0.00 34.68 5.92
243 244 0.166814 GTTCATTCACTGAGTGGCGC 59.833 55.000 13.33 0.00 34.68 6.53
244 245 0.439985 CGTTCATTCACTGAGTGGCG 59.560 55.000 13.33 1.72 34.68 5.69
245 246 0.798776 CCGTTCATTCACTGAGTGGC 59.201 55.000 13.33 0.00 34.68 5.01
246 247 1.800586 CACCGTTCATTCACTGAGTGG 59.199 52.381 13.33 0.00 36.52 4.00
247 248 1.800586 CCACCGTTCATTCACTGAGTG 59.199 52.381 6.18 6.18 34.68 3.51
248 249 1.878102 GCCACCGTTCATTCACTGAGT 60.878 52.381 0.00 0.00 34.68 3.41
249 250 0.798776 GCCACCGTTCATTCACTGAG 59.201 55.000 0.00 0.00 34.68 3.35
250 251 0.107643 TGCCACCGTTCATTCACTGA 59.892 50.000 0.00 0.00 0.00 3.41
251 252 1.167851 ATGCCACCGTTCATTCACTG 58.832 50.000 0.00 0.00 0.00 3.66
252 253 1.541147 CAATGCCACCGTTCATTCACT 59.459 47.619 0.00 0.00 31.15 3.41
253 254 1.269448 ACAATGCCACCGTTCATTCAC 59.731 47.619 0.00 0.00 31.15 3.18
254 255 1.614996 ACAATGCCACCGTTCATTCA 58.385 45.000 0.00 0.00 31.15 2.57
255 256 2.288152 ACAACAATGCCACCGTTCATTC 60.288 45.455 0.00 0.00 31.15 2.67
256 257 1.686052 ACAACAATGCCACCGTTCATT 59.314 42.857 0.00 0.00 33.56 2.57
257 258 1.000385 CACAACAATGCCACCGTTCAT 60.000 47.619 0.00 0.00 0.00 2.57
258 259 0.383590 CACAACAATGCCACCGTTCA 59.616 50.000 0.00 0.00 0.00 3.18
259 260 0.939106 GCACAACAATGCCACCGTTC 60.939 55.000 0.00 0.00 39.86 3.95
260 261 1.067250 GCACAACAATGCCACCGTT 59.933 52.632 0.00 0.00 39.86 4.44
261 262 2.727544 GCACAACAATGCCACCGT 59.272 55.556 0.00 0.00 39.86 4.83
262 263 2.428902 CGCACAACAATGCCACCG 60.429 61.111 0.00 0.00 42.99 4.94
263 264 2.734346 GCGCACAACAATGCCACC 60.734 61.111 0.30 0.00 42.99 4.61
264 265 2.017783 CTGCGCACAACAATGCCAC 61.018 57.895 5.66 0.00 42.99 5.01
265 266 2.335729 CTGCGCACAACAATGCCA 59.664 55.556 5.66 0.00 42.99 4.92
266 267 1.730547 GACTGCGCACAACAATGCC 60.731 57.895 5.66 0.00 42.99 4.40
267 268 0.387622 ATGACTGCGCACAACAATGC 60.388 50.000 5.66 0.00 42.48 3.56
268 269 2.508867 GTATGACTGCGCACAACAATG 58.491 47.619 5.66 0.00 0.00 2.82
269 270 1.128507 CGTATGACTGCGCACAACAAT 59.871 47.619 5.66 0.00 0.00 2.71
270 271 0.510790 CGTATGACTGCGCACAACAA 59.489 50.000 5.66 0.00 0.00 2.83
271 272 0.598942 ACGTATGACTGCGCACAACA 60.599 50.000 5.66 7.49 33.35 3.33
272 273 0.179250 CACGTATGACTGCGCACAAC 60.179 55.000 5.66 0.77 33.35 3.32
273 274 0.319125 TCACGTATGACTGCGCACAA 60.319 50.000 5.66 0.00 33.35 3.33
274 275 1.287503 TCACGTATGACTGCGCACA 59.712 52.632 5.66 4.05 33.35 4.57
275 276 4.162640 TCACGTATGACTGCGCAC 57.837 55.556 5.66 0.00 33.35 5.34
283 284 5.828328 AGAATCTACATGGAGTCACGTATGA 59.172 40.000 4.45 0.00 33.43 2.15
284 285 6.078202 AGAATCTACATGGAGTCACGTATG 57.922 41.667 4.45 0.00 33.43 2.39
285 286 6.096987 ACAAGAATCTACATGGAGTCACGTAT 59.903 38.462 4.45 0.00 33.43 3.06
286 287 5.417894 ACAAGAATCTACATGGAGTCACGTA 59.582 40.000 4.45 0.00 33.43 3.57
287 288 4.220821 ACAAGAATCTACATGGAGTCACGT 59.779 41.667 4.45 0.00 33.43 4.49
288 289 4.564372 CACAAGAATCTACATGGAGTCACG 59.436 45.833 4.45 0.00 33.43 4.35
289 290 5.578727 GTCACAAGAATCTACATGGAGTCAC 59.421 44.000 4.45 0.00 33.43 3.67
290 291 5.622233 CGTCACAAGAATCTACATGGAGTCA 60.622 44.000 4.45 0.00 33.43 3.41
291 292 4.800993 CGTCACAAGAATCTACATGGAGTC 59.199 45.833 4.45 0.00 0.00 3.36
292 293 4.382040 CCGTCACAAGAATCTACATGGAGT 60.382 45.833 4.45 0.00 0.00 3.85
293 294 4.115516 CCGTCACAAGAATCTACATGGAG 58.884 47.826 0.00 0.00 0.00 3.86
294 295 3.678806 GCCGTCACAAGAATCTACATGGA 60.679 47.826 0.00 0.00 0.00 3.41
295 296 2.609459 GCCGTCACAAGAATCTACATGG 59.391 50.000 0.00 0.00 0.00 3.66
296 297 3.261580 TGCCGTCACAAGAATCTACATG 58.738 45.455 0.00 0.00 0.00 3.21
297 298 3.610040 TGCCGTCACAAGAATCTACAT 57.390 42.857 0.00 0.00 0.00 2.29
298 299 3.394674 TTGCCGTCACAAGAATCTACA 57.605 42.857 0.00 0.00 0.00 2.74
299 300 4.742438 TTTTGCCGTCACAAGAATCTAC 57.258 40.909 0.00 0.00 0.00 2.59
300 301 4.819630 AGTTTTTGCCGTCACAAGAATCTA 59.180 37.500 0.00 0.00 0.00 1.98
301 302 3.632145 AGTTTTTGCCGTCACAAGAATCT 59.368 39.130 0.00 0.00 0.00 2.40
302 303 3.964909 AGTTTTTGCCGTCACAAGAATC 58.035 40.909 0.00 0.00 0.00 2.52
303 304 3.548014 CGAGTTTTTGCCGTCACAAGAAT 60.548 43.478 0.00 0.00 0.00 2.40
304 305 2.223157 CGAGTTTTTGCCGTCACAAGAA 60.223 45.455 0.00 0.00 0.00 2.52
305 306 1.329292 CGAGTTTTTGCCGTCACAAGA 59.671 47.619 0.00 0.00 0.00 3.02
306 307 1.596954 CCGAGTTTTTGCCGTCACAAG 60.597 52.381 0.00 0.00 0.00 3.16
307 308 0.378962 CCGAGTTTTTGCCGTCACAA 59.621 50.000 0.00 0.00 0.00 3.33
308 309 2.018544 CCGAGTTTTTGCCGTCACA 58.981 52.632 0.00 0.00 0.00 3.58
309 310 1.370051 GCCGAGTTTTTGCCGTCAC 60.370 57.895 0.00 0.00 0.00 3.67
310 311 2.887889 CGCCGAGTTTTTGCCGTCA 61.888 57.895 0.00 0.00 0.00 4.35
311 312 1.908066 ATCGCCGAGTTTTTGCCGTC 61.908 55.000 0.00 0.00 0.00 4.79
312 313 1.908066 GATCGCCGAGTTTTTGCCGT 61.908 55.000 0.00 0.00 0.00 5.68
313 314 1.226018 GATCGCCGAGTTTTTGCCG 60.226 57.895 0.00 0.00 0.00 5.69
314 315 0.239879 TTGATCGCCGAGTTTTTGCC 59.760 50.000 0.00 0.00 0.00 4.52
315 316 1.327507 GTTGATCGCCGAGTTTTTGC 58.672 50.000 0.00 0.00 0.00 3.68
316 317 1.265635 TGGTTGATCGCCGAGTTTTTG 59.734 47.619 0.00 0.00 0.00 2.44
317 318 1.600023 TGGTTGATCGCCGAGTTTTT 58.400 45.000 0.00 0.00 0.00 1.94
318 319 1.737793 GATGGTTGATCGCCGAGTTTT 59.262 47.619 0.00 0.00 0.00 2.43
319 320 1.066143 AGATGGTTGATCGCCGAGTTT 60.066 47.619 0.00 0.00 36.04 2.66
320 321 0.537188 AGATGGTTGATCGCCGAGTT 59.463 50.000 0.00 0.00 36.04 3.01
321 322 0.103208 GAGATGGTTGATCGCCGAGT 59.897 55.000 0.00 0.00 36.04 4.18
322 323 0.387202 AGAGATGGTTGATCGCCGAG 59.613 55.000 0.00 0.00 36.04 4.63
323 324 0.824109 AAGAGATGGTTGATCGCCGA 59.176 50.000 0.00 0.00 36.04 5.54
324 325 2.509052 TAAGAGATGGTTGATCGCCG 57.491 50.000 2.31 0.00 36.04 6.46
325 326 3.733337 ACATAAGAGATGGTTGATCGCC 58.267 45.455 0.00 0.00 36.04 5.54
421 422 9.210329 TCTACACGTGTTTTTGTATGATATGTT 57.790 29.630 28.55 0.00 0.00 2.71
422 423 8.766000 TCTACACGTGTTTTTGTATGATATGT 57.234 30.769 28.55 0.00 0.00 2.29
423 424 9.636965 CATCTACACGTGTTTTTGTATGATATG 57.363 33.333 28.55 9.57 0.00 1.78
424 425 9.378551 ACATCTACACGTGTTTTTGTATGATAT 57.621 29.630 28.55 0.33 0.00 1.63
425 426 8.766000 ACATCTACACGTGTTTTTGTATGATA 57.234 30.769 28.55 2.56 0.00 2.15
426 427 7.667043 ACATCTACACGTGTTTTTGTATGAT 57.333 32.000 28.55 13.59 0.00 2.45
427 428 8.766000 ATACATCTACACGTGTTTTTGTATGA 57.234 30.769 29.43 17.56 30.71 2.15
428 429 9.472995 GAATACATCTACACGTGTTTTTGTATG 57.527 33.333 30.03 23.50 31.49 2.39
429 430 8.662141 GGAATACATCTACACGTGTTTTTGTAT 58.338 33.333 28.55 27.56 31.93 2.29
430 431 7.118101 GGGAATACATCTACACGTGTTTTTGTA 59.882 37.037 28.55 26.76 0.00 2.41
434 435 5.553123 TGGGAATACATCTACACGTGTTTT 58.447 37.500 28.55 9.22 0.00 2.43
457 458 8.367911 TGCACGTAAGGATTGATCTATAATCTT 58.632 33.333 0.00 0.54 46.39 2.40
459 460 7.598869 TGTGCACGTAAGGATTGATCTATAATC 59.401 37.037 13.13 0.00 46.39 1.75
460 461 7.385205 GTGTGCACGTAAGGATTGATCTATAAT 59.615 37.037 13.13 0.00 46.39 1.28
461 462 6.700081 GTGTGCACGTAAGGATTGATCTATAA 59.300 38.462 13.13 0.00 46.39 0.98
463 464 5.050490 GTGTGCACGTAAGGATTGATCTAT 58.950 41.667 13.13 0.00 46.39 1.98
465 466 3.262420 GTGTGCACGTAAGGATTGATCT 58.738 45.455 13.13 0.00 46.39 2.75
466 467 3.000041 TGTGTGCACGTAAGGATTGATC 59.000 45.455 13.13 0.00 46.39 2.92
467 468 3.052455 TGTGTGCACGTAAGGATTGAT 57.948 42.857 13.13 0.00 46.39 2.57
468 469 2.535012 TGTGTGCACGTAAGGATTGA 57.465 45.000 13.13 0.00 46.39 2.57
495 497 4.447290 TGAGTTGTGTTCTTCGGAAATCA 58.553 39.130 0.00 0.00 35.55 2.57
513 515 1.228552 AAAAGGGCCGCACATGAGT 60.229 52.632 0.00 0.00 0.00 3.41
516 518 2.432972 GCAAAAGGGCCGCACATG 60.433 61.111 0.00 0.00 0.00 3.21
517 519 2.037620 TTTGCAAAAGGGCCGCACAT 62.038 50.000 10.02 0.00 34.87 3.21
548 550 1.003233 GAACCAAGCCCGCTCTCTT 60.003 57.895 0.00 0.00 0.00 2.85
549 551 2.217038 TGAACCAAGCCCGCTCTCT 61.217 57.895 0.00 0.00 0.00 3.10
553 555 4.660938 GGGTGAACCAAGCCCGCT 62.661 66.667 1.16 0.00 39.85 5.52
563 565 3.292159 AAAAGCCGCGGGGTGAAC 61.292 61.111 29.38 8.93 31.90 3.18
584 586 2.427232 TTTTACTGTCAGTCCGGACG 57.573 50.000 28.26 22.00 40.72 4.79
589 591 8.603242 TTCTAGTTCAATTTTACTGTCAGTCC 57.397 34.615 9.26 0.00 0.00 3.85
595 597 7.361799 GCGGGAATTCTAGTTCAATTTTACTGT 60.362 37.037 5.23 0.00 0.00 3.55
612 614 0.526211 GGTTTGAGTGGCGGGAATTC 59.474 55.000 0.00 0.00 0.00 2.17
627 630 3.971305 TGGATACTATGGTGGATCGGTTT 59.029 43.478 0.00 0.00 37.61 3.27
636 639 7.094634 GGCTTGATTATGTTGGATACTATGGTG 60.095 40.741 0.00 0.00 37.61 4.17
703 706 3.181515 GGTTTGTGGGTTTTTCTTTTGCG 60.182 43.478 0.00 0.00 0.00 4.85
705 708 7.674471 TTTAGGTTTGTGGGTTTTTCTTTTG 57.326 32.000 0.00 0.00 0.00 2.44
716 725 8.045176 TGTTTTCAAAATTTTAGGTTTGTGGG 57.955 30.769 2.44 0.00 36.36 4.61
740 749 8.659491 CCACATCTGATCCGTATGTTTATATTG 58.341 37.037 2.81 0.00 31.60 1.90
743 752 7.297936 ACCACATCTGATCCGTATGTTTATA 57.702 36.000 2.81 0.00 31.60 0.98
801 810 0.393808 AATCCAACGGGCGCTACATT 60.394 50.000 7.64 0.00 0.00 2.71
807 816 1.443702 GTCAAAATCCAACGGGCGC 60.444 57.895 0.00 0.00 0.00 6.53
809 818 1.243902 TCTGTCAAAATCCAACGGGC 58.756 50.000 0.00 0.00 0.00 6.13
832 841 7.639113 TTCATTTTCTCTCTCTCTCTCTACC 57.361 40.000 0.00 0.00 0.00 3.18
835 844 6.155049 CCCTTTCATTTTCTCTCTCTCTCTCT 59.845 42.308 0.00 0.00 0.00 3.10
836 845 6.340522 CCCTTTCATTTTCTCTCTCTCTCTC 58.659 44.000 0.00 0.00 0.00 3.20
837 846 5.189539 CCCCTTTCATTTTCTCTCTCTCTCT 59.810 44.000 0.00 0.00 0.00 3.10
838 847 5.427378 CCCCTTTCATTTTCTCTCTCTCTC 58.573 45.833 0.00 0.00 0.00 3.20
839 848 4.324176 GCCCCTTTCATTTTCTCTCTCTCT 60.324 45.833 0.00 0.00 0.00 3.10
840 849 3.944650 GCCCCTTTCATTTTCTCTCTCTC 59.055 47.826 0.00 0.00 0.00 3.20
900 911 3.953612 AGCCACTCATTCTCTCTCTACTG 59.046 47.826 0.00 0.00 0.00 2.74
976 1494 4.179599 GGAGGGAGGAGGAGGGGG 62.180 77.778 0.00 0.00 0.00 5.40
977 1495 4.179599 GGGAGGGAGGAGGAGGGG 62.180 77.778 0.00 0.00 0.00 4.79
1023 1544 2.671682 GAGGGGTGAGGAAGTGGC 59.328 66.667 0.00 0.00 0.00 5.01
1026 1547 2.125225 GGGGAGGGGTGAGGAAGT 59.875 66.667 0.00 0.00 0.00 3.01
1028 1549 2.454941 GAGGGGAGGGGTGAGGAA 59.545 66.667 0.00 0.00 0.00 3.36
1029 1550 3.695825 GGAGGGGAGGGGTGAGGA 61.696 72.222 0.00 0.00 0.00 3.71
1155 1692 2.096496 GTCACCAGCACATACTTCATGC 59.904 50.000 0.00 0.00 38.29 4.06
1290 1827 4.468689 GCGGGAGAAACGGGAGGG 62.469 72.222 0.00 0.00 0.00 4.30
1490 2041 3.545703 ACTTGGAGTGGACAAAGAACAG 58.454 45.455 0.00 0.00 0.00 3.16
1491 2042 3.644966 ACTTGGAGTGGACAAAGAACA 57.355 42.857 0.00 0.00 0.00 3.18
1492 2043 4.398044 TGAAACTTGGAGTGGACAAAGAAC 59.602 41.667 0.00 0.00 0.00 3.01
1493 2044 4.594970 TGAAACTTGGAGTGGACAAAGAA 58.405 39.130 0.00 0.00 0.00 2.52
1495 2046 4.981806 TTGAAACTTGGAGTGGACAAAG 57.018 40.909 0.00 0.00 0.00 2.77
1496 2047 5.245075 AGTTTTGAAACTTGGAGTGGACAAA 59.755 36.000 3.37 0.00 46.52 2.83
1542 2096 6.329723 AGCTAGCTAGGTAGAGGTAGTTAAGA 59.670 42.308 28.81 0.00 45.37 2.10
1543 2097 6.536447 AGCTAGCTAGGTAGAGGTAGTTAAG 58.464 44.000 28.81 4.55 45.37 1.85
1544 2098 6.512514 AGCTAGCTAGGTAGAGGTAGTTAA 57.487 41.667 28.81 0.00 45.37 2.01
1571 2125 8.840321 CGTACCAGTAATTAACCTAACTAGCTA 58.160 37.037 0.00 0.00 0.00 3.32
1572 2126 7.201857 CCGTACCAGTAATTAACCTAACTAGCT 60.202 40.741 0.00 0.00 0.00 3.32
1573 2127 6.920210 CCGTACCAGTAATTAACCTAACTAGC 59.080 42.308 0.00 0.00 0.00 3.42
1574 2128 8.000780 ACCGTACCAGTAATTAACCTAACTAG 57.999 38.462 0.00 0.00 0.00 2.57
1575 2129 7.954666 ACCGTACCAGTAATTAACCTAACTA 57.045 36.000 0.00 0.00 0.00 2.24
1576 2130 6.857437 ACCGTACCAGTAATTAACCTAACT 57.143 37.500 0.00 0.00 0.00 2.24
1604 2159 6.881065 TGGTTGATTTTGTGATCTAGGAAGAG 59.119 38.462 0.00 0.00 34.49 2.85
1635 2190 2.795231 TTGCTCTGATTTGGGGAGAG 57.205 50.000 0.00 0.00 36.99 3.20
1696 2251 3.305398 AGTAGCAGAGGAAACAGTTCG 57.695 47.619 0.00 0.00 34.28 3.95
1705 2260 6.605471 TGTCAAAGAAATAGTAGCAGAGGA 57.395 37.500 0.00 0.00 0.00 3.71
1714 2269 4.142600 GGAAGCGCATGTCAAAGAAATAGT 60.143 41.667 11.47 0.00 0.00 2.12
1721 2283 1.446907 AGAGGAAGCGCATGTCAAAG 58.553 50.000 11.47 0.00 0.00 2.77
1731 2293 5.293569 ACGGTAAAATGAAATAGAGGAAGCG 59.706 40.000 0.00 0.00 0.00 4.68
1738 2300 6.529125 GTGTCTCGACGGTAAAATGAAATAGA 59.471 38.462 0.00 0.00 0.00 1.98
1748 2310 5.406175 CCAAAATAAGTGTCTCGACGGTAAA 59.594 40.000 0.00 0.00 0.00 2.01
1751 2313 3.323243 CCAAAATAAGTGTCTCGACGGT 58.677 45.455 0.00 0.00 0.00 4.83
1753 2315 3.367025 GTCCCAAAATAAGTGTCTCGACG 59.633 47.826 0.00 0.00 0.00 5.12
1754 2316 3.367025 CGTCCCAAAATAAGTGTCTCGAC 59.633 47.826 0.00 0.00 0.00 4.20
1755 2317 3.581755 CGTCCCAAAATAAGTGTCTCGA 58.418 45.455 0.00 0.00 0.00 4.04
1769 2331 1.002069 TAGTACTCCCTCCGTCCCAA 58.998 55.000 0.00 0.00 0.00 4.12
1782 2344 7.147672 GGAACTAGTGGAGAGAGTAGTAGTACT 60.148 44.444 10.09 10.09 42.59 2.73
1783 2345 6.986231 GGAACTAGTGGAGAGAGTAGTAGTAC 59.014 46.154 0.00 0.00 31.96 2.73
1784 2346 6.902416 AGGAACTAGTGGAGAGAGTAGTAGTA 59.098 42.308 0.00 0.00 36.02 1.82
1786 2350 6.053005 CAGGAACTAGTGGAGAGAGTAGTAG 58.947 48.000 0.00 0.00 36.02 2.57
1788 2352 4.290196 ACAGGAACTAGTGGAGAGAGTAGT 59.710 45.833 0.00 0.00 36.02 2.73
1801 2365 7.365741 TGAACTAAAACGACTACAGGAACTAG 58.634 38.462 0.00 0.00 36.02 2.57
1802 2366 7.275888 TGAACTAAAACGACTACAGGAACTA 57.724 36.000 0.00 0.00 36.02 2.24
1803 2367 6.152932 TGAACTAAAACGACTACAGGAACT 57.847 37.500 0.00 0.00 43.88 3.01
1808 2372 9.550811 AAAAACTTTGAACTAAAACGACTACAG 57.449 29.630 0.00 0.00 0.00 2.74
1812 2376 7.479603 GTCGAAAAACTTTGAACTAAAACGACT 59.520 33.333 0.00 0.00 39.96 4.18
1813 2377 7.508929 CGTCGAAAAACTTTGAACTAAAACGAC 60.509 37.037 0.00 0.00 39.80 4.34
1814 2378 6.462323 CGTCGAAAAACTTTGAACTAAAACGA 59.538 34.615 0.00 0.00 0.00 3.85
1815 2379 6.290180 CCGTCGAAAAACTTTGAACTAAAACG 60.290 38.462 0.00 0.00 0.00 3.60
1835 2399 3.930229 TCACCAAAGATAATGAACCGTCG 59.070 43.478 0.00 0.00 0.00 5.12
1886 2455 5.460419 GCCGACATAGAATACAAAGTCTCAG 59.540 44.000 0.00 0.00 31.28 3.35
1887 2456 5.348986 GCCGACATAGAATACAAAGTCTCA 58.651 41.667 0.00 0.00 31.28 3.27
1888 2457 4.745620 GGCCGACATAGAATACAAAGTCTC 59.254 45.833 0.00 0.00 31.28 3.36
1889 2458 4.161565 TGGCCGACATAGAATACAAAGTCT 59.838 41.667 0.00 0.00 33.82 3.24
1890 2459 4.439057 TGGCCGACATAGAATACAAAGTC 58.561 43.478 0.00 0.00 0.00 3.01
1891 2460 4.081087 ACTGGCCGACATAGAATACAAAGT 60.081 41.667 0.00 0.00 0.00 2.66
1892 2461 4.271049 CACTGGCCGACATAGAATACAAAG 59.729 45.833 0.00 0.00 0.00 2.77
1893 2462 4.188462 CACTGGCCGACATAGAATACAAA 58.812 43.478 0.00 0.00 0.00 2.83
1894 2463 3.196901 ACACTGGCCGACATAGAATACAA 59.803 43.478 0.00 0.00 0.00 2.41
1895 2464 2.764010 ACACTGGCCGACATAGAATACA 59.236 45.455 0.00 0.00 0.00 2.29
1896 2465 3.181479 TGACACTGGCCGACATAGAATAC 60.181 47.826 0.00 0.00 0.00 1.89
1897 2466 3.028130 TGACACTGGCCGACATAGAATA 58.972 45.455 0.00 0.00 0.00 1.75
1898 2467 1.831106 TGACACTGGCCGACATAGAAT 59.169 47.619 0.00 0.00 0.00 2.40
1899 2468 1.067142 GTGACACTGGCCGACATAGAA 60.067 52.381 0.00 0.00 0.00 2.10
1900 2469 0.530744 GTGACACTGGCCGACATAGA 59.469 55.000 0.00 0.00 0.00 1.98
1901 2470 0.532573 AGTGACACTGGCCGACATAG 59.467 55.000 7.47 0.00 0.00 2.23
2089 2659 3.495001 GGGTCAAGAGACAGAAAGTTTCG 59.505 47.826 9.91 7.74 46.80 3.46
2182 2752 5.084519 ACTAGTACATGACAGGACAAGGAA 58.915 41.667 0.00 0.00 0.00 3.36
2301 2873 7.961827 CAGTGAGAAAATAAACAAGATGAGAGC 59.038 37.037 0.00 0.00 0.00 4.09
2434 3006 1.878102 CGGTGAAGCAGCAGGTAGTTT 60.878 52.381 0.00 0.00 0.00 2.66
2440 3024 1.597854 TTGACGGTGAAGCAGCAGG 60.598 57.895 0.00 0.00 0.00 4.85
2454 3038 2.224314 GCACAGCTTGTAAGAGGTTGAC 59.776 50.000 0.00 0.00 0.00 3.18
2560 3201 5.707242 ACTCGAGTATTTCAGACTGAACA 57.293 39.130 18.46 9.49 35.89 3.18
2712 3354 7.445707 GTGGAAGAAGATAAGAAAAGTGTTCCT 59.554 37.037 0.00 0.00 32.58 3.36
2715 3357 6.766467 ACGTGGAAGAAGATAAGAAAAGTGTT 59.234 34.615 0.00 0.00 0.00 3.32
2754 3396 8.859090 CAATTATCCCATACTTGGCTCATTTTA 58.141 33.333 0.00 0.00 42.15 1.52
2788 3431 7.545965 AGAAATATCAAACTGAGGTACGTTGAG 59.454 37.037 0.00 0.00 0.00 3.02
2867 3533 1.738365 CGAGTCAGCTTGATGTCCAGG 60.738 57.143 0.00 0.00 0.00 4.45
3004 3678 3.067180 CAGTCTGCAAATGTCAAAGGTGT 59.933 43.478 0.00 0.00 0.00 4.16
3090 3764 6.146184 CACATAACTCTGGTAAAGTGACACAG 59.854 42.308 8.59 0.00 0.00 3.66
3432 4110 5.323581 GGGAACTCTATCCTAGTTACCGAT 58.676 45.833 1.61 0.00 45.65 4.18
3534 4212 2.388310 TTTCATCGGTAATGTGCGGA 57.612 45.000 0.00 0.00 36.68 5.54
3588 4266 1.668419 GCTTATCCGTGCCATCAACT 58.332 50.000 0.00 0.00 0.00 3.16
3600 4278 3.019564 ACAAACATCAGCTGGCTTATCC 58.980 45.455 15.13 0.00 0.00 2.59
3666 4344 0.097674 GCGATGGTTTGCTGCAGTAG 59.902 55.000 16.64 0.00 0.00 2.57
3690 4368 6.483974 ACAACTGTGTCCATCGTGTTATTAAA 59.516 34.615 0.00 0.00 29.49 1.52
3844 4522 5.567138 ACACTGAAGGACTTCACTTTTTG 57.433 39.130 10.52 3.43 43.90 2.44
3928 4618 8.233190 GCATATTGAGTAAGATCAGGTTAATGC 58.767 37.037 0.00 0.00 0.00 3.56
4079 4769 9.161629 ACGATGTAAATGAAAATGACTATCACA 57.838 29.630 0.00 0.00 0.00 3.58
4086 4776 8.687824 ATGGAAACGATGTAAATGAAAATGAC 57.312 30.769 0.00 0.00 0.00 3.06
4263 4953 1.068943 TGAAAACAGGGGGTAGGGCA 61.069 55.000 0.00 0.00 0.00 5.36
4286 4976 3.610040 AGTTAACCATCAGCATCGACA 57.390 42.857 0.88 0.00 0.00 4.35
4453 5143 7.549488 GTCAGCACTAATGTTGTACTAAAGGAT 59.451 37.037 0.00 0.00 38.18 3.24
4630 5320 6.258947 GCTCTCTGATCCTGTAAAAATACCAC 59.741 42.308 0.00 0.00 0.00 4.16
4764 5454 7.473511 GCACTTTCCCCACACTATATAAGAGAT 60.474 40.741 0.00 0.00 0.00 2.75
4923 5613 7.340232 ACCTGAGAATATGTGTGCACAATAATT 59.660 33.333 23.59 19.54 45.41 1.40
4937 5627 4.070716 GGCAATCCTGACCTGAGAATATG 58.929 47.826 0.00 0.00 0.00 1.78
5031 5721 6.093082 CACTTCAGTACTTGAATCATGCATGA 59.907 38.462 30.47 30.47 44.48 3.07
5033 5723 5.942236 ACACTTCAGTACTTGAATCATGCAT 59.058 36.000 0.00 0.00 44.48 3.96
5046 5736 1.798813 CGCCAAGGAACACTTCAGTAC 59.201 52.381 0.00 0.00 37.29 2.73
5051 5741 0.818040 ACCACGCCAAGGAACACTTC 60.818 55.000 0.00 0.00 37.29 3.01
5085 5777 7.340487 GGGAGATTCCAAGATTTCACTAAATGT 59.660 37.037 0.00 0.00 38.64 2.71
5103 5795 7.201652 CCGTTCTCTCAAAAATAAGGGAGATTC 60.202 40.741 0.00 0.00 35.97 2.52
5106 5798 5.488341 CCGTTCTCTCAAAAATAAGGGAGA 58.512 41.667 0.00 0.00 35.30 3.71
5114 5806 4.385825 TGTGTAGCCGTTCTCTCAAAAAT 58.614 39.130 0.00 0.00 0.00 1.82
5115 5807 3.799366 TGTGTAGCCGTTCTCTCAAAAA 58.201 40.909 0.00 0.00 0.00 1.94
5116 5808 3.462483 TGTGTAGCCGTTCTCTCAAAA 57.538 42.857 0.00 0.00 0.00 2.44
5117 5809 3.678056 ATGTGTAGCCGTTCTCTCAAA 57.322 42.857 0.00 0.00 0.00 2.69
5118 5810 3.678056 AATGTGTAGCCGTTCTCTCAA 57.322 42.857 0.00 0.00 0.00 3.02
5119 5811 3.678056 AAATGTGTAGCCGTTCTCTCA 57.322 42.857 0.00 0.00 0.00 3.27
5133 5825 3.913548 TGATCACACCCGAAAAATGTG 57.086 42.857 0.00 0.00 44.14 3.21
5134 5826 3.888930 ACTTGATCACACCCGAAAAATGT 59.111 39.130 0.00 0.00 0.00 2.71
5135 5827 4.503741 ACTTGATCACACCCGAAAAATG 57.496 40.909 0.00 0.00 0.00 2.32
5136 5828 5.529581 AAACTTGATCACACCCGAAAAAT 57.470 34.783 0.00 0.00 0.00 1.82
5138 5830 6.642707 AATAAACTTGATCACACCCGAAAA 57.357 33.333 0.00 0.00 0.00 2.29
5139 5831 6.294286 GGAAATAAACTTGATCACACCCGAAA 60.294 38.462 0.00 0.00 0.00 3.46
5140 5832 5.182380 GGAAATAAACTTGATCACACCCGAA 59.818 40.000 0.00 0.00 0.00 4.30
5141 5833 4.698304 GGAAATAAACTTGATCACACCCGA 59.302 41.667 0.00 0.00 0.00 5.14
5142 5834 4.700213 AGGAAATAAACTTGATCACACCCG 59.300 41.667 0.00 0.00 0.00 5.28
5149 5851 9.050601 CAGAGGTATCAGGAAATAAACTTGATC 57.949 37.037 0.00 0.00 36.02 2.92
5194 5896 0.400213 TCCTGTCCAAAGCAACCGAT 59.600 50.000 0.00 0.00 0.00 4.18
5221 5923 1.134438 AGGAAGGAACCCAGTCCACC 61.134 60.000 8.01 0.00 40.48 4.61
5419 6134 2.857186 TTCTGCAGTAACTGGCATCA 57.143 45.000 14.67 0.00 39.65 3.07
5424 6139 5.702670 TCTTTCAGATTTCTGCAGTAACTGG 59.297 40.000 22.65 11.76 43.46 4.00
5427 6142 6.793492 ACTCTTTCAGATTTCTGCAGTAAC 57.207 37.500 14.67 5.68 43.46 2.50
5431 6146 6.148264 GGAAAACTCTTTCAGATTTCTGCAG 58.852 40.000 7.63 7.63 41.50 4.41
5652 6367 0.863144 CATGGTGTTTTTGCAGCTGC 59.137 50.000 31.89 31.89 42.50 5.25
5704 6419 4.803098 ACTACTTGAACAGAATAGCCGT 57.197 40.909 0.00 0.00 0.00 5.68
5706 6421 9.774742 CAAATAAACTACTTGAACAGAATAGCC 57.225 33.333 0.00 0.00 0.00 3.93
5713 6428 9.781834 TTTCACACAAATAAACTACTTGAACAG 57.218 29.630 0.00 0.00 0.00 3.16
5718 6433 8.487176 GGCAATTTCACACAAATAAACTACTTG 58.513 33.333 0.00 0.00 0.00 3.16
5741 6456 1.340308 ATGCAGAGTAAGCACATGGCA 60.340 47.619 8.58 0.00 45.95 4.92
5742 6457 1.332997 GATGCAGAGTAAGCACATGGC 59.667 52.381 0.00 0.00 45.95 4.40
5745 6460 4.582869 TCAAAGATGCAGAGTAAGCACAT 58.417 39.130 0.00 0.00 45.95 3.21
5774 6489 2.371841 TGAGTTTTAGAGCCCTGCAGAA 59.628 45.455 17.39 0.00 0.00 3.02
5787 6502 2.147958 GTCGCACCCATGTGAGTTTTA 58.852 47.619 0.00 0.00 45.91 1.52
5987 6964 1.607148 CATACCTCGTATCTGTGGCGA 59.393 52.381 0.00 0.00 0.00 5.54
6252 7533 6.108687 TGAGTTGGTAGCTCAATAATCTGTG 58.891 40.000 0.00 0.00 39.70 3.66
6390 7680 8.410912 TCGAAAGGAAAGAGACGATATATTGAA 58.589 33.333 6.98 0.00 0.00 2.69
6391 7681 7.937649 TCGAAAGGAAAGAGACGATATATTGA 58.062 34.615 6.98 0.00 0.00 2.57
6445 7735 7.010923 TGTCATTTTGTTGTTAATTTGGTCAGC 59.989 33.333 0.00 0.00 0.00 4.26
6489 7779 1.794701 CGGCGATCAATCCTGTACATG 59.205 52.381 0.00 0.00 0.00 3.21
6508 7798 1.339291 TCTAGCTGTCCAGATGATGCG 59.661 52.381 0.00 0.00 32.72 4.73
6544 7834 3.114616 CTGACAGCGCCGGAAGTG 61.115 66.667 5.05 0.00 0.00 3.16
6602 7892 1.062148 GCCGTTCATCCTTAACTTCGC 59.938 52.381 0.00 0.00 0.00 4.70
6634 7924 0.461870 TGCTGCCATTCGCGAAGTAT 60.462 50.000 27.20 7.74 42.08 2.12
6673 7963 3.205815 AAAAACTGGTCTGCTGCCA 57.794 47.368 0.00 6.59 34.42 4.92
6849 8147 4.991687 GCAGCACTAATAAACCCTAGCTAG 59.008 45.833 14.20 14.20 0.00 3.42
7141 8453 5.923733 ACAGCATCCCAGCTATATAGTAC 57.076 43.478 11.38 0.00 44.54 2.73
7143 8455 7.180946 TGAATTACAGCATCCCAGCTATATAGT 59.819 37.037 11.38 0.00 44.54 2.12
7144 8456 7.559486 TGAATTACAGCATCCCAGCTATATAG 58.441 38.462 5.30 5.30 44.54 1.31
7168 8486 6.400568 AGGAAATGGAAATGTGTTTATGCTG 58.599 36.000 0.00 0.00 0.00 4.41
7173 8491 6.780031 TCCAGAAGGAAATGGAAATGTGTTTA 59.220 34.615 0.00 0.00 42.61 2.01
7200 8519 6.176183 ACATCTGAGTATTTGTTTCCTCCTG 58.824 40.000 0.00 0.00 0.00 3.86
7258 8586 1.986757 GAGCTGCACCCTGGAGAGA 60.987 63.158 1.02 0.00 38.14 3.10
7259 8587 1.988956 AGAGCTGCACCCTGGAGAG 60.989 63.158 1.02 0.00 38.14 3.20
7260 8588 2.121385 AGAGCTGCACCCTGGAGA 59.879 61.111 1.02 0.00 38.14 3.71
7261 8589 2.121992 AACAGAGCTGCACCCTGGAG 62.122 60.000 16.81 0.00 38.97 3.86
7262 8590 1.708993 AAACAGAGCTGCACCCTGGA 61.709 55.000 16.81 0.00 32.52 3.86
7352 8698 6.512091 GCTTAACACATTTCGTCCAACAAGTA 60.512 38.462 0.00 0.00 0.00 2.24
7464 8818 2.631160 TTGATGTGGTCGTTGTTCCT 57.369 45.000 0.00 0.00 0.00 3.36
7509 8863 0.320073 CCGTTACCTGAACAGCGGAA 60.320 55.000 11.20 0.05 41.45 4.30
7510 8864 1.290955 CCGTTACCTGAACAGCGGA 59.709 57.895 11.20 0.00 41.45 5.54
7526 8880 3.933955 CCGTAGTATCATAGGAGAGACCG 59.066 52.174 0.00 0.00 44.74 4.79
7535 8889 6.262496 TCTGTTGTCTTCCCGTAGTATCATAG 59.738 42.308 0.00 0.00 0.00 2.23
7590 8945 8.939201 ATTACACTCTGAAATGTCACTATGAG 57.061 34.615 0.00 0.00 31.69 2.90
7686 9041 6.006449 AGAACTCTCTACGGTGTTACCTAAA 58.994 40.000 0.00 0.00 35.66 1.85
7691 9046 6.734104 TTCTAGAACTCTCTACGGTGTTAC 57.266 41.667 0.00 0.00 32.70 2.50
7926 9957 6.130298 TGTCGTGTTTGATGAATTTTGTCT 57.870 33.333 0.00 0.00 0.00 3.41
7991 10022 8.817100 TGCTAGACTTATTTGAATGTTATGTCG 58.183 33.333 0.00 0.00 0.00 4.35
7992 10023 9.922305 GTGCTAGACTTATTTGAATGTTATGTC 57.078 33.333 0.00 0.00 0.00 3.06
8002 10033 9.890629 ATCTATTGTTGTGCTAGACTTATTTGA 57.109 29.630 0.00 0.00 0.00 2.69
8049 10080 5.258841 TCATGGAAATCTTGTTGAGCATCT 58.741 37.500 0.00 0.00 34.92 2.90
8070 10101 2.035449 GTGGGACGATATGATCCGTTCA 59.965 50.000 3.43 0.80 39.30 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.