Multiple sequence alignment - TraesCS1B01G440800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G440800 chr1B 100.000 3841 0 0 1 3841 662024274 662020434 0.000000e+00 7094.0
1 TraesCS1B01G440800 chr1B 85.079 630 71 10 3190 3808 662005982 662005365 4.210000e-174 621.0
2 TraesCS1B01G440800 chr1B 88.800 125 9 4 2075 2198 429281413 429281533 8.600000e-32 148.0
3 TraesCS1B01G440800 chr1D 89.871 1550 83 26 2349 3841 475924822 475923290 0.000000e+00 1925.0
4 TraesCS1B01G440800 chr1D 85.227 1144 98 32 831 1947 475926332 475925233 0.000000e+00 1110.0
5 TraesCS1B01G440800 chr1D 83.535 662 82 13 3157 3808 475914039 475913395 9.190000e-166 593.0
6 TraesCS1B01G440800 chr1D 84.286 490 50 10 3361 3841 475919317 475918846 1.630000e-123 453.0
7 TraesCS1B01G440800 chr1D 90.000 270 22 3 3497 3762 475864295 475864027 1.020000e-90 344.0
8 TraesCS1B01G440800 chr1D 92.793 111 5 2 2090 2197 422309016 422309126 1.430000e-34 158.0
9 TraesCS1B01G440800 chr1D 94.521 73 4 0 904 976 475927574 475927502 3.140000e-21 113.0
10 TraesCS1B01G440800 chr1A 85.041 1210 65 33 899 2094 571789991 571788884 0.000000e+00 1125.0
11 TraesCS1B01G440800 chr1A 90.602 830 46 12 3032 3841 571787991 571787174 0.000000e+00 1072.0
12 TraesCS1B01G440800 chr1A 91.134 688 40 9 2349 3021 571788717 571788036 0.000000e+00 913.0
13 TraesCS1B01G440800 chr1A 84.024 676 72 21 3154 3803 571738334 571737669 5.450000e-173 617.0
14 TraesCS1B01G440800 chr1A 78.022 546 68 27 252 770 571792560 571792040 2.900000e-76 296.0
15 TraesCS1B01G440800 chr1A 97.000 100 3 0 2090 2189 12578042 12578141 6.600000e-38 169.0
16 TraesCS1B01G440800 chr2B 81.102 889 113 29 2967 3841 99521612 99520765 0.000000e+00 660.0
17 TraesCS1B01G440800 chr2B 85.122 410 40 13 2577 2968 99555799 99555393 2.150000e-107 399.0
18 TraesCS1B01G440800 chr2B 88.387 155 15 3 2202 2355 99572315 99572163 2.360000e-42 183.0
19 TraesCS1B01G440800 chr2B 85.897 78 6 5 327 400 603927612 603927688 1.140000e-10 78.7
20 TraesCS1B01G440800 chr4B 84.029 551 62 7 3260 3808 357954992 357955518 1.230000e-139 507.0
21 TraesCS1B01G440800 chr4B 89.565 230 17 4 2349 2578 357911161 357911383 6.280000e-73 285.0
22 TraesCS1B01G440800 chr4B 78.409 352 48 19 2874 3216 357954264 357954596 1.810000e-48 204.0
23 TraesCS1B01G440800 chr4B 96.970 99 3 0 2093 2191 404456242 404456144 2.370000e-37 167.0
24 TraesCS1B01G440800 chr4D 89.109 202 17 4 2646 2845 240937507 240937309 2.960000e-61 246.0
25 TraesCS1B01G440800 chr4D 96.939 98 3 0 2092 2189 457526284 457526187 8.540000e-37 165.0
26 TraesCS1B01G440800 chr3B 97.000 100 3 0 2090 2189 225173866 225173965 6.600000e-38 169.0
27 TraesCS1B01G440800 chr3B 96.040 101 4 0 2090 2190 561029521 561029421 8.540000e-37 165.0
28 TraesCS1B01G440800 chr3B 81.818 99 16 2 304 400 45535333 45535235 8.840000e-12 82.4
29 TraesCS1B01G440800 chr7D 96.117 103 3 1 2090 2191 407261305 407261203 2.370000e-37 167.0
30 TraesCS1B01G440800 chr7D 90.244 123 10 2 2068 2189 162222184 162222305 3.970000e-35 159.0
31 TraesCS1B01G440800 chr7D 79.464 112 23 0 271 382 75012790 75012679 3.180000e-11 80.5
32 TraesCS1B01G440800 chr5D 76.974 152 33 2 230 379 408210012 408210163 6.840000e-13 86.1
33 TraesCS1B01G440800 chr7A 84.615 78 12 0 305 382 698769064 698768987 1.140000e-10 78.7
34 TraesCS1B01G440800 chr7A 84.615 78 12 0 305 382 698856090 698856013 1.140000e-10 78.7
35 TraesCS1B01G440800 chr7A 84.615 78 12 0 305 382 699026042 699025965 1.140000e-10 78.7
36 TraesCS1B01G440800 chr2A 79.279 111 22 1 272 382 570252054 570252163 4.110000e-10 76.8
37 TraesCS1B01G440800 chrUn 78.571 112 22 2 273 382 92702049 92702160 5.320000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G440800 chr1B 662020434 662024274 3840 True 7094.00 7094 100.00000 1 3841 1 chr1B.!!$R2 3840
1 TraesCS1B01G440800 chr1B 662005365 662005982 617 True 621.00 621 85.07900 3190 3808 1 chr1B.!!$R1 618
2 TraesCS1B01G440800 chr1D 475918846 475927574 8728 True 900.25 1925 88.47625 831 3841 4 chr1D.!!$R3 3010
3 TraesCS1B01G440800 chr1D 475913395 475914039 644 True 593.00 593 83.53500 3157 3808 1 chr1D.!!$R2 651
4 TraesCS1B01G440800 chr1A 571787174 571792560 5386 True 851.50 1125 86.19975 252 3841 4 chr1A.!!$R2 3589
5 TraesCS1B01G440800 chr1A 571737669 571738334 665 True 617.00 617 84.02400 3154 3803 1 chr1A.!!$R1 649
6 TraesCS1B01G440800 chr2B 99520765 99521612 847 True 660.00 660 81.10200 2967 3841 1 chr2B.!!$R1 874
7 TraesCS1B01G440800 chr4B 357954264 357955518 1254 False 355.50 507 81.21900 2874 3808 2 chr4B.!!$F2 934

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
44 45 0.243365 GAACGGCCATGTGCATCAAA 59.757 50.0 2.24 0.0 43.89 2.69 F
46 47 0.244450 ACGGCCATGTGCATCAAAAG 59.756 50.0 2.24 0.0 43.89 2.27 F
47 48 0.244450 CGGCCATGTGCATCAAAAGT 59.756 50.0 2.24 0.0 43.89 2.66 F
596 620 0.385974 GGCACGAGCAATCACAACAC 60.386 55.0 7.26 0.0 44.61 3.32 F
1971 4464 0.036306 ATCTTCCCAAAGCCGAACGT 59.964 50.0 0.00 0.0 32.18 3.99 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1795 4261 0.033366 ACACGCACATGAGCACACTA 59.967 50.000 15.56 0.0 0.00 2.74 R
1797 4263 0.865111 TTACACGCACATGAGCACAC 59.135 50.000 15.56 0.0 0.00 3.82 R
1798 4264 1.262950 GTTTACACGCACATGAGCACA 59.737 47.619 15.56 0.0 0.00 4.57 R
2176 4819 0.981183 TGGTCATTACTGCCTCCGTT 59.019 50.000 0.00 0.0 0.00 4.44 R
2919 5625 3.070018 AGAAATGTGCACTCACTACAGC 58.930 45.455 19.41 0.0 43.49 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 7.663827 AGGTTTCTAAAAATTTAAGGGAACGG 58.336 34.615 0.00 0.00 0.00 4.44
32 33 5.648178 TCTAAAAATTTAAGGGAACGGCC 57.352 39.130 0.00 0.00 0.00 6.13
33 34 5.078256 TCTAAAAATTTAAGGGAACGGCCA 58.922 37.500 2.24 0.00 38.95 5.36
34 35 4.901197 AAAAATTTAAGGGAACGGCCAT 57.099 36.364 2.24 0.00 38.95 4.40
35 36 3.885724 AAATTTAAGGGAACGGCCATG 57.114 42.857 2.24 0.00 38.95 3.66
36 37 2.525105 ATTTAAGGGAACGGCCATGT 57.475 45.000 2.24 0.00 38.95 3.21
37 38 1.540267 TTTAAGGGAACGGCCATGTG 58.460 50.000 2.24 0.00 38.95 3.21
39 40 2.130821 TAAGGGAACGGCCATGTGCA 62.131 55.000 2.24 0.00 43.89 4.57
40 41 2.755469 GGGAACGGCCATGTGCAT 60.755 61.111 2.24 0.00 43.89 3.96
41 42 2.774799 GGGAACGGCCATGTGCATC 61.775 63.158 2.24 3.87 43.89 3.91
42 43 2.045708 GGAACGGCCATGTGCATCA 61.046 57.895 2.24 0.00 43.89 3.07
44 45 0.243365 GAACGGCCATGTGCATCAAA 59.757 50.000 2.24 0.00 43.89 2.69
45 46 0.678395 AACGGCCATGTGCATCAAAA 59.322 45.000 2.24 0.00 43.89 2.44
46 47 0.244450 ACGGCCATGTGCATCAAAAG 59.756 50.000 2.24 0.00 43.89 2.27
47 48 0.244450 CGGCCATGTGCATCAAAAGT 59.756 50.000 2.24 0.00 43.89 2.66
48 49 1.337074 CGGCCATGTGCATCAAAAGTT 60.337 47.619 2.24 0.00 43.89 2.66
49 50 2.769893 GGCCATGTGCATCAAAAGTTT 58.230 42.857 0.00 0.00 43.89 2.66
50 51 3.613671 CGGCCATGTGCATCAAAAGTTTA 60.614 43.478 2.24 0.00 43.89 2.01
52 53 3.928375 GCCATGTGCATCAAAAGTTTAGG 59.072 43.478 0.00 0.00 40.77 2.69
53 54 4.321899 GCCATGTGCATCAAAAGTTTAGGA 60.322 41.667 0.00 0.00 40.77 2.94
54 55 5.404946 CCATGTGCATCAAAAGTTTAGGAG 58.595 41.667 0.00 0.00 0.00 3.69
55 56 5.183713 CCATGTGCATCAAAAGTTTAGGAGA 59.816 40.000 0.00 0.00 0.00 3.71
57 58 6.317789 TGTGCATCAAAAGTTTAGGAGAAG 57.682 37.500 0.00 0.00 0.00 2.85
58 59 5.241506 TGTGCATCAAAAGTTTAGGAGAAGG 59.758 40.000 0.00 0.00 0.00 3.46
59 60 4.766891 TGCATCAAAAGTTTAGGAGAAGGG 59.233 41.667 0.00 0.00 0.00 3.95
60 61 4.380973 GCATCAAAAGTTTAGGAGAAGGGC 60.381 45.833 0.00 0.00 0.00 5.19
61 62 4.724279 TCAAAAGTTTAGGAGAAGGGCT 57.276 40.909 0.00 0.00 0.00 5.19
63 64 5.805728 TCAAAAGTTTAGGAGAAGGGCTAG 58.194 41.667 0.00 0.00 0.00 3.42
65 66 3.493475 AGTTTAGGAGAAGGGCTAGGT 57.507 47.619 0.00 0.00 0.00 3.08
67 68 4.288398 AGTTTAGGAGAAGGGCTAGGTAC 58.712 47.826 0.00 0.00 0.00 3.34
69 70 0.756070 AGGAGAAGGGCTAGGTACGC 60.756 60.000 0.00 0.00 0.00 4.42
70 71 1.740905 GAGAAGGGCTAGGTACGCC 59.259 63.158 1.88 1.88 46.83 5.68
76 77 3.545724 GGCTAGGTACGCCAAAAGT 57.454 52.632 5.48 0.00 46.77 2.66
77 78 1.817357 GGCTAGGTACGCCAAAAGTT 58.183 50.000 5.48 0.00 46.77 2.66
78 79 2.156917 GGCTAGGTACGCCAAAAGTTT 58.843 47.619 5.48 0.00 46.77 2.66
80 81 3.373130 GGCTAGGTACGCCAAAAGTTTAG 59.627 47.826 5.48 0.00 46.77 1.85
81 82 3.999001 GCTAGGTACGCCAAAAGTTTAGT 59.001 43.478 0.00 0.00 37.19 2.24
83 84 4.347360 AGGTACGCCAAAAGTTTAGTCT 57.653 40.909 0.00 0.00 37.19 3.24
84 85 5.473066 AGGTACGCCAAAAGTTTAGTCTA 57.527 39.130 0.00 0.00 37.19 2.59
86 87 7.174107 AGGTACGCCAAAAGTTTAGTCTATA 57.826 36.000 0.00 0.00 37.19 1.31
87 88 7.789026 AGGTACGCCAAAAGTTTAGTCTATAT 58.211 34.615 0.00 0.00 37.19 0.86
88 89 8.917088 AGGTACGCCAAAAGTTTAGTCTATATA 58.083 33.333 0.00 0.00 37.19 0.86
111 112 8.814448 ATATTTGGGGTTAAAGGATAGAGAGA 57.186 34.615 0.00 0.00 0.00 3.10
112 113 6.561519 TTTGGGGTTAAAGGATAGAGAGAG 57.438 41.667 0.00 0.00 0.00 3.20
113 114 4.557705 TGGGGTTAAAGGATAGAGAGAGG 58.442 47.826 0.00 0.00 0.00 3.69
114 115 4.015541 TGGGGTTAAAGGATAGAGAGAGGT 60.016 45.833 0.00 0.00 0.00 3.85
115 116 4.969999 GGGGTTAAAGGATAGAGAGAGGTT 59.030 45.833 0.00 0.00 0.00 3.50
116 117 5.429109 GGGGTTAAAGGATAGAGAGAGGTTT 59.571 44.000 0.00 0.00 0.00 3.27
117 118 6.614496 GGGGTTAAAGGATAGAGAGAGGTTTA 59.386 42.308 0.00 0.00 0.00 2.01
118 119 7.418827 GGGGTTAAAGGATAGAGAGAGGTTTAC 60.419 44.444 0.00 0.00 0.00 2.01
120 121 8.706521 GGTTAAAGGATAGAGAGAGGTTTACAT 58.293 37.037 0.00 0.00 0.00 2.29
122 123 7.741554 AAAGGATAGAGAGAGGTTTACATGT 57.258 36.000 2.69 2.69 0.00 3.21
124 125 8.840200 AAGGATAGAGAGAGGTTTACATGTAA 57.160 34.615 14.35 14.35 0.00 2.41
125 126 8.840200 AGGATAGAGAGAGGTTTACATGTAAA 57.160 34.615 23.91 23.91 33.10 2.01
126 127 9.440761 AGGATAGAGAGAGGTTTACATGTAAAT 57.559 33.333 28.69 17.08 37.37 1.40
127 128 9.482627 GGATAGAGAGAGGTTTACATGTAAATG 57.517 37.037 28.69 0.00 37.37 2.32
132 133 9.482627 GAGAGAGGTTTACATGTAAATGATAGG 57.517 37.037 28.69 0.00 37.37 2.57
133 134 8.993424 AGAGAGGTTTACATGTAAATGATAGGT 58.007 33.333 28.69 13.36 37.37 3.08
139 140 9.946165 GTTTACATGTAAATGATAGGTAAAGGC 57.054 33.333 28.69 10.97 36.49 4.35
143 144 8.157476 ACATGTAAATGATAGGTAAAGGCTAGG 58.843 37.037 0.00 0.00 0.00 3.02
144 145 7.074653 TGTAAATGATAGGTAAAGGCTAGGG 57.925 40.000 0.00 0.00 0.00 3.53
145 146 6.847567 TGTAAATGATAGGTAAAGGCTAGGGA 59.152 38.462 0.00 0.00 0.00 4.20
146 147 7.516209 TGTAAATGATAGGTAAAGGCTAGGGAT 59.484 37.037 0.00 0.00 0.00 3.85
147 148 6.380079 AATGATAGGTAAAGGCTAGGGATG 57.620 41.667 0.00 0.00 0.00 3.51
150 151 2.493091 AGGTAAAGGCTAGGGATGCTT 58.507 47.619 0.00 0.00 0.00 3.91
151 152 2.853077 AGGTAAAGGCTAGGGATGCTTT 59.147 45.455 0.00 0.00 0.00 3.51
152 153 2.952310 GGTAAAGGCTAGGGATGCTTTG 59.048 50.000 0.00 0.00 30.25 2.77
153 154 3.371595 GGTAAAGGCTAGGGATGCTTTGA 60.372 47.826 0.00 0.00 30.25 2.69
154 155 3.677156 AAAGGCTAGGGATGCTTTGAT 57.323 42.857 0.00 0.00 30.25 2.57
156 157 4.363991 AAGGCTAGGGATGCTTTGATAG 57.636 45.455 0.00 0.00 0.00 2.08
157 158 3.321950 AGGCTAGGGATGCTTTGATAGT 58.678 45.455 0.00 0.00 0.00 2.12
158 159 4.493618 AGGCTAGGGATGCTTTGATAGTA 58.506 43.478 0.00 0.00 0.00 1.82
159 160 5.097234 AGGCTAGGGATGCTTTGATAGTAT 58.903 41.667 0.00 0.00 31.20 2.12
160 161 5.549619 AGGCTAGGGATGCTTTGATAGTATT 59.450 40.000 0.00 0.00 28.37 1.89
163 164 6.936900 GCTAGGGATGCTTTGATAGTATTCAA 59.063 38.462 0.00 0.00 33.89 2.69
164 165 7.445402 GCTAGGGATGCTTTGATAGTATTCAAA 59.555 37.037 0.00 0.31 41.92 2.69
165 166 9.342308 CTAGGGATGCTTTGATAGTATTCAAAA 57.658 33.333 1.78 0.53 43.12 2.44
166 167 8.230472 AGGGATGCTTTGATAGTATTCAAAAG 57.770 34.615 1.78 8.48 43.12 2.27
167 168 7.836183 AGGGATGCTTTGATAGTATTCAAAAGT 59.164 33.333 12.07 3.29 43.12 2.66
168 169 8.470002 GGGATGCTTTGATAGTATTCAAAAGTT 58.530 33.333 12.07 4.76 43.12 2.66
169 170 9.860898 GGATGCTTTGATAGTATTCAAAAGTTT 57.139 29.630 12.07 0.00 43.12 2.66
180 181 8.706322 AGTATTCAAAAGTTTGTATTGTCCCT 57.294 30.769 3.82 0.00 39.18 4.20
181 182 9.802039 AGTATTCAAAAGTTTGTATTGTCCCTA 57.198 29.630 3.82 0.00 39.18 3.53
184 185 9.758651 ATTCAAAAGTTTGTATTGTCCCTAAAC 57.241 29.630 3.82 0.00 39.18 2.01
185 186 8.528044 TCAAAAGTTTGTATTGTCCCTAAACT 57.472 30.769 3.82 0.00 41.74 2.66
186 187 9.629878 TCAAAAGTTTGTATTGTCCCTAAACTA 57.370 29.630 0.00 0.00 39.78 2.24
189 190 7.683437 AGTTTGTATTGTCCCTAAACTAAGC 57.317 36.000 0.00 0.00 39.14 3.09
190 191 6.657966 AGTTTGTATTGTCCCTAAACTAAGCC 59.342 38.462 0.00 0.00 39.14 4.35
191 192 6.382919 TTGTATTGTCCCTAAACTAAGCCT 57.617 37.500 0.00 0.00 0.00 4.58
192 193 5.985911 TGTATTGTCCCTAAACTAAGCCTC 58.014 41.667 0.00 0.00 0.00 4.70
193 194 3.994931 TTGTCCCTAAACTAAGCCTCC 57.005 47.619 0.00 0.00 0.00 4.30
194 195 2.910544 TGTCCCTAAACTAAGCCTCCA 58.089 47.619 0.00 0.00 0.00 3.86
195 196 3.253220 TGTCCCTAAACTAAGCCTCCAA 58.747 45.455 0.00 0.00 0.00 3.53
196 197 3.850173 TGTCCCTAAACTAAGCCTCCAAT 59.150 43.478 0.00 0.00 0.00 3.16
197 198 4.200092 GTCCCTAAACTAAGCCTCCAATG 58.800 47.826 0.00 0.00 0.00 2.82
198 199 4.080526 GTCCCTAAACTAAGCCTCCAATGA 60.081 45.833 0.00 0.00 0.00 2.57
199 200 4.164221 TCCCTAAACTAAGCCTCCAATGAG 59.836 45.833 0.00 0.00 38.42 2.90
200 201 4.164221 CCCTAAACTAAGCCTCCAATGAGA 59.836 45.833 0.00 0.00 41.42 3.27
201 202 5.339200 CCCTAAACTAAGCCTCCAATGAGAA 60.339 44.000 0.00 0.00 41.42 2.87
202 203 5.819901 CCTAAACTAAGCCTCCAATGAGAAG 59.180 44.000 0.00 0.00 41.42 2.85
203 204 3.274095 ACTAAGCCTCCAATGAGAAGC 57.726 47.619 0.00 0.00 41.42 3.86
204 205 2.843113 ACTAAGCCTCCAATGAGAAGCT 59.157 45.455 0.00 0.00 41.42 3.74
205 206 4.033709 ACTAAGCCTCCAATGAGAAGCTA 58.966 43.478 0.00 0.00 41.42 3.32
206 207 4.471386 ACTAAGCCTCCAATGAGAAGCTAA 59.529 41.667 0.00 0.00 41.42 3.09
207 208 4.307032 AAGCCTCCAATGAGAAGCTAAA 57.693 40.909 0.00 0.00 41.42 1.85
208 209 4.516652 AGCCTCCAATGAGAAGCTAAAT 57.483 40.909 0.00 0.00 41.42 1.40
209 210 5.636903 AGCCTCCAATGAGAAGCTAAATA 57.363 39.130 0.00 0.00 41.42 1.40
210 211 6.006275 AGCCTCCAATGAGAAGCTAAATAA 57.994 37.500 0.00 0.00 41.42 1.40
211 212 6.426587 AGCCTCCAATGAGAAGCTAAATAAA 58.573 36.000 0.00 0.00 41.42 1.40
212 213 6.891908 AGCCTCCAATGAGAAGCTAAATAAAA 59.108 34.615 0.00 0.00 41.42 1.52
213 214 7.397192 AGCCTCCAATGAGAAGCTAAATAAAAA 59.603 33.333 0.00 0.00 41.42 1.94
237 238 8.767478 AAAATACTCCATCTGCAAAAATTGAG 57.233 30.769 0.00 0.00 0.00 3.02
238 239 7.707624 AATACTCCATCTGCAAAAATTGAGA 57.292 32.000 9.94 0.00 0.00 3.27
239 240 7.707624 ATACTCCATCTGCAAAAATTGAGAA 57.292 32.000 9.94 0.00 0.00 2.87
240 241 5.776744 ACTCCATCTGCAAAAATTGAGAAC 58.223 37.500 9.94 0.00 0.00 3.01
241 242 5.537674 ACTCCATCTGCAAAAATTGAGAACT 59.462 36.000 9.94 0.00 0.00 3.01
242 243 6.041296 ACTCCATCTGCAAAAATTGAGAACTT 59.959 34.615 9.94 0.00 0.00 2.66
243 244 6.819284 TCCATCTGCAAAAATTGAGAACTTT 58.181 32.000 0.00 0.00 0.00 2.66
244 245 7.274447 TCCATCTGCAAAAATTGAGAACTTTT 58.726 30.769 0.00 0.00 0.00 2.27
245 246 8.420222 TCCATCTGCAAAAATTGAGAACTTTTA 58.580 29.630 0.00 0.00 0.00 1.52
246 247 9.044150 CCATCTGCAAAAATTGAGAACTTTTAA 57.956 29.630 0.00 0.00 0.00 1.52
247 248 9.853921 CATCTGCAAAAATTGAGAACTTTTAAC 57.146 29.630 0.00 0.00 0.00 2.01
248 249 8.994429 TCTGCAAAAATTGAGAACTTTTAACA 57.006 26.923 0.00 0.00 0.00 2.41
249 250 9.429359 TCTGCAAAAATTGAGAACTTTTAACAA 57.571 25.926 0.00 0.00 0.00 2.83
320 321 9.672673 GCATGGTCTATCTAATGGTATGTATTT 57.327 33.333 0.00 0.00 0.00 1.40
405 406 8.850454 TTAAAGAAAATTATATTCACGCCTGC 57.150 30.769 0.00 0.00 0.00 4.85
406 407 6.449635 AAGAAAATTATATTCACGCCTGCA 57.550 33.333 0.00 0.00 0.00 4.41
407 408 6.639632 AGAAAATTATATTCACGCCTGCAT 57.360 33.333 0.00 0.00 0.00 3.96
410 411 8.796475 AGAAAATTATATTCACGCCTGCATTAT 58.204 29.630 0.00 0.00 0.00 1.28
441 465 9.638239 TTTTAAGTCATTAATGAACTTCATGGC 57.362 29.630 24.21 10.83 37.15 4.40
442 466 6.839124 AAGTCATTAATGAACTTCATGGCA 57.161 33.333 19.55 0.00 37.15 4.92
546 570 4.195334 GGTCAGATGGGCCGGCAT 62.195 66.667 30.85 14.88 0.00 4.40
569 593 1.579429 CACCCAAGGCTAAACGTGC 59.421 57.895 0.00 0.00 0.00 5.34
596 620 0.385974 GGCACGAGCAATCACAACAC 60.386 55.000 7.26 0.00 44.61 3.32
598 622 0.858583 CACGAGCAATCACAACACGA 59.141 50.000 0.00 0.00 0.00 4.35
607 631 5.699001 AGCAATCACAACACGATTACTAACA 59.301 36.000 0.00 0.00 31.88 2.41
608 632 6.203915 AGCAATCACAACACGATTACTAACAA 59.796 34.615 0.00 0.00 31.88 2.83
616 640 3.841643 ACGATTACTAACAAGGTCGTGG 58.158 45.455 0.00 0.00 40.34 4.94
621 645 1.897398 CTAACAAGGTCGTGGCGTGC 61.897 60.000 0.00 0.00 0.00 5.34
673 697 1.828081 CCCCTCTAGTAAACGGGCC 59.172 63.158 0.00 0.00 35.29 5.80
701 725 3.818586 CATGTTTGGCCCACATGTC 57.181 52.632 26.62 3.42 44.45 3.06
703 727 1.619827 CATGTTTGGCCCACATGTCTT 59.380 47.619 26.62 3.84 44.45 3.01
788 812 1.672356 AGACATGTCTTGCCGGCAC 60.672 57.895 32.95 19.47 36.31 5.01
825 849 1.476833 CCAGGCACGGCTTATAACCAT 60.477 52.381 0.00 0.00 0.00 3.55
826 850 1.603802 CAGGCACGGCTTATAACCATG 59.396 52.381 0.00 0.00 0.00 3.66
831 855 2.641197 GGCTTATAACCATGCCGGG 58.359 57.895 2.18 0.00 40.22 5.73
832 856 1.524008 GGCTTATAACCATGCCGGGC 61.524 60.000 13.32 13.32 40.22 6.13
939 3367 1.153168 CATTTCCGGGCGTCATCCT 60.153 57.895 0.00 0.00 0.00 3.24
942 3370 4.770362 TCCGGGCGTCATCCTCCA 62.770 66.667 0.00 0.00 0.00 3.86
943 3371 4.530857 CCGGGCGTCATCCTCCAC 62.531 72.222 0.00 0.00 0.00 4.02
979 3407 2.657237 CAAACGGAGGGAGCTCGT 59.343 61.111 7.83 0.00 38.89 4.18
1079 3507 2.829003 CGGCAGCTACCTCCTCGA 60.829 66.667 0.42 0.00 0.00 4.04
1136 3564 2.363361 GAGGAGGAGGGGACGGAA 59.637 66.667 0.00 0.00 0.00 4.30
1227 3655 2.811317 CAGCTCTTCGCCGTGTCC 60.811 66.667 0.00 0.00 40.39 4.02
1368 3805 0.949105 TTCCCTTTTCGTCTCGCTGC 60.949 55.000 0.00 0.00 0.00 5.25
1385 3822 2.736721 GCTGCTTTCACGTGTCAATCTA 59.263 45.455 16.51 0.00 0.00 1.98
1386 3823 3.181526 GCTGCTTTCACGTGTCAATCTAG 60.182 47.826 16.51 7.84 0.00 2.43
1442 3881 2.483583 TGTTTCGTGGTGAACATTGC 57.516 45.000 0.00 0.00 35.97 3.56
1448 3894 1.876799 CGTGGTGAACATTGCCAGTAA 59.123 47.619 0.00 0.00 32.31 2.24
1465 3911 3.759086 CAGTAACACTACCAGAGCAGAGA 59.241 47.826 0.00 0.00 0.00 3.10
1475 3921 1.465387 CAGAGCAGAGAAGCAGCAAAG 59.535 52.381 0.00 0.00 36.85 2.77
1479 3925 2.488545 AGCAGAGAAGCAGCAAAGATTG 59.511 45.455 0.00 0.00 36.85 2.67
1539 3985 3.736126 GCAATTTGGCCACTATCAGAAGC 60.736 47.826 3.88 0.00 0.00 3.86
1549 3995 6.458888 GGCCACTATCAGAAGCTCAATTTTAC 60.459 42.308 0.00 0.00 0.00 2.01
1565 4011 7.788026 TCAATTTTACATATCGGGTGAGTACT 58.212 34.615 0.00 0.00 0.00 2.73
1567 4013 6.534475 TTTTACATATCGGGTGAGTACTGT 57.466 37.500 0.00 0.00 0.00 3.55
1576 4022 1.469940 GGTGAGTACTGTCGATGCTGG 60.470 57.143 0.00 0.00 0.00 4.85
1578 4024 0.818296 GAGTACTGTCGATGCTGGGT 59.182 55.000 0.00 0.00 0.00 4.51
1579 4025 0.532573 AGTACTGTCGATGCTGGGTG 59.467 55.000 0.00 0.00 0.00 4.61
1581 4027 1.475280 GTACTGTCGATGCTGGGTGTA 59.525 52.381 0.00 0.00 0.00 2.90
1582 4028 0.532573 ACTGTCGATGCTGGGTGTAG 59.467 55.000 0.00 0.00 0.00 2.74
1583 4029 0.817654 CTGTCGATGCTGGGTGTAGA 59.182 55.000 0.00 0.00 0.00 2.59
1584 4030 1.204704 CTGTCGATGCTGGGTGTAGAA 59.795 52.381 0.00 0.00 0.00 2.10
1585 4031 1.621317 TGTCGATGCTGGGTGTAGAAA 59.379 47.619 0.00 0.00 0.00 2.52
1586 4032 2.236146 TGTCGATGCTGGGTGTAGAAAT 59.764 45.455 0.00 0.00 0.00 2.17
1587 4033 3.270877 GTCGATGCTGGGTGTAGAAATT 58.729 45.455 0.00 0.00 0.00 1.82
1588 4034 3.063997 GTCGATGCTGGGTGTAGAAATTG 59.936 47.826 0.00 0.00 0.00 2.32
1589 4035 3.055458 TCGATGCTGGGTGTAGAAATTGA 60.055 43.478 0.00 0.00 0.00 2.57
1590 4036 3.879295 CGATGCTGGGTGTAGAAATTGAT 59.121 43.478 0.00 0.00 0.00 2.57
1591 4037 5.056480 CGATGCTGGGTGTAGAAATTGATA 58.944 41.667 0.00 0.00 0.00 2.15
1592 4038 5.178252 CGATGCTGGGTGTAGAAATTGATAG 59.822 44.000 0.00 0.00 0.00 2.08
1593 4039 5.692115 TGCTGGGTGTAGAAATTGATAGA 57.308 39.130 0.00 0.00 0.00 1.98
1594 4040 5.428253 TGCTGGGTGTAGAAATTGATAGAC 58.572 41.667 0.00 0.00 0.00 2.59
1595 4041 4.508124 GCTGGGTGTAGAAATTGATAGACG 59.492 45.833 0.00 0.00 0.00 4.18
1596 4042 5.681437 GCTGGGTGTAGAAATTGATAGACGA 60.681 44.000 0.00 0.00 0.00 4.20
1597 4043 6.479972 TGGGTGTAGAAATTGATAGACGAT 57.520 37.500 0.00 0.00 0.00 3.73
1598 4044 6.280643 TGGGTGTAGAAATTGATAGACGATG 58.719 40.000 0.00 0.00 0.00 3.84
1599 4045 5.177696 GGGTGTAGAAATTGATAGACGATGC 59.822 44.000 0.00 0.00 0.00 3.91
1600 4046 5.986135 GGTGTAGAAATTGATAGACGATGCT 59.014 40.000 0.00 0.00 0.00 3.79
1601 4047 6.074088 GGTGTAGAAATTGATAGACGATGCTG 60.074 42.308 0.00 0.00 0.00 4.41
1602 4048 6.477033 GTGTAGAAATTGATAGACGATGCTGT 59.523 38.462 0.00 0.00 0.00 4.40
1603 4049 5.980698 AGAAATTGATAGACGATGCTGTG 57.019 39.130 0.00 0.00 0.00 3.66
1604 4050 5.423015 AGAAATTGATAGACGATGCTGTGT 58.577 37.500 0.00 0.00 0.00 3.72
1605 4051 5.292834 AGAAATTGATAGACGATGCTGTGTG 59.707 40.000 0.00 0.00 0.00 3.82
1606 4052 3.592898 TTGATAGACGATGCTGTGTGT 57.407 42.857 0.00 0.00 0.00 3.72
1607 4053 4.712122 TTGATAGACGATGCTGTGTGTA 57.288 40.909 0.00 0.00 0.00 2.90
1612 4058 4.193826 AGACGATGCTGTGTGTAGAAAT 57.806 40.909 0.00 0.00 0.00 2.17
1614 4060 4.389992 AGACGATGCTGTGTGTAGAAATTG 59.610 41.667 0.00 0.00 0.00 2.32
1662 4115 5.745312 AGAACTGTCTCACATGAATGGTA 57.255 39.130 0.00 0.00 0.00 3.25
1668 4121 1.875514 CTCACATGAATGGTATGGCGG 59.124 52.381 0.00 0.00 0.00 6.13
1671 4124 1.202806 ACATGAATGGTATGGCGGGAG 60.203 52.381 0.00 0.00 0.00 4.30
1705 4162 1.337703 TGCATTTTGTGGCTGTCAGAC 59.662 47.619 3.32 0.00 0.00 3.51
1718 4182 5.711506 TGGCTGTCAGACATATTTGAACAAT 59.288 36.000 3.55 0.00 0.00 2.71
1778 4244 3.553105 GTGTTCTAGGTCGACAAAACGTT 59.447 43.478 18.91 0.00 34.70 3.99
1779 4245 3.552699 TGTTCTAGGTCGACAAAACGTTG 59.447 43.478 18.91 0.00 40.84 4.10
1780 4246 2.129607 TCTAGGTCGACAAAACGTTGC 58.870 47.619 18.91 0.00 38.39 4.17
1781 4247 1.862201 CTAGGTCGACAAAACGTTGCA 59.138 47.619 18.91 0.00 38.39 4.08
1782 4248 1.088306 AGGTCGACAAAACGTTGCAA 58.912 45.000 18.91 0.00 38.39 4.08
1783 4249 1.185189 GGTCGACAAAACGTTGCAAC 58.815 50.000 19.89 19.89 38.39 4.17
1784 4250 1.202098 GGTCGACAAAACGTTGCAACT 60.202 47.619 26.09 11.38 38.39 3.16
1785 4251 1.837747 GTCGACAAAACGTTGCAACTG 59.162 47.619 26.09 19.31 38.39 3.16
1786 4252 1.732809 TCGACAAAACGTTGCAACTGA 59.267 42.857 26.09 8.77 38.39 3.41
1787 4253 2.101125 CGACAAAACGTTGCAACTGAG 58.899 47.619 26.09 13.96 38.39 3.35
1788 4254 2.222931 CGACAAAACGTTGCAACTGAGA 60.223 45.455 26.09 0.00 38.39 3.27
1789 4255 3.098636 GACAAAACGTTGCAACTGAGAC 58.901 45.455 26.09 11.12 38.39 3.36
1790 4256 2.747446 ACAAAACGTTGCAACTGAGACT 59.253 40.909 26.09 4.21 38.39 3.24
1791 4257 3.100817 CAAAACGTTGCAACTGAGACTG 58.899 45.455 26.09 11.85 0.00 3.51
1792 4258 0.657840 AACGTTGCAACTGAGACTGC 59.342 50.000 26.09 4.70 39.09 4.40
1793 4259 1.202568 CGTTGCAACTGAGACTGCG 59.797 57.895 26.09 6.95 41.63 5.18
1794 4260 1.215014 CGTTGCAACTGAGACTGCGA 61.215 55.000 26.09 2.80 41.63 5.10
1795 4261 1.151668 GTTGCAACTGAGACTGCGAT 58.848 50.000 22.36 0.00 41.63 4.58
1796 4262 2.337583 GTTGCAACTGAGACTGCGATA 58.662 47.619 22.36 0.00 41.63 2.92
1797 4263 2.284263 TGCAACTGAGACTGCGATAG 57.716 50.000 6.76 0.00 41.63 2.08
1798 4264 1.546029 TGCAACTGAGACTGCGATAGT 59.454 47.619 6.76 0.00 44.02 2.12
1799 4265 1.923204 GCAACTGAGACTGCGATAGTG 59.077 52.381 0.00 0.00 40.53 2.74
1861 4347 9.092876 TGGAATGAACTTAAAACACAAAATGTC 57.907 29.630 0.00 0.00 42.31 3.06
1887 4380 2.037772 CACTTGGTAAGAGAGCACCACT 59.962 50.000 0.00 0.00 44.42 4.00
1888 4381 2.037772 ACTTGGTAAGAGAGCACCACTG 59.962 50.000 0.00 0.00 44.42 3.66
1889 4382 0.321671 TGGTAAGAGAGCACCACTGC 59.678 55.000 0.00 0.00 39.91 4.40
1890 4383 0.321671 GGTAAGAGAGCACCACTGCA 59.678 55.000 0.00 0.00 46.97 4.41
1891 4384 1.674221 GGTAAGAGAGCACCACTGCAG 60.674 57.143 13.48 13.48 46.97 4.41
1892 4385 0.610174 TAAGAGAGCACCACTGCAGG 59.390 55.000 19.93 4.24 46.97 4.85
1893 4386 1.123861 AAGAGAGCACCACTGCAGGA 61.124 55.000 19.93 0.00 46.97 3.86
1894 4387 1.079266 GAGAGCACCACTGCAGGAG 60.079 63.158 19.93 11.26 46.97 3.69
1949 4442 5.977129 CCGGCCAATAGTTTTTATGATGTTC 59.023 40.000 2.24 0.00 0.00 3.18
1965 4458 0.171231 GTTCGCATCTTCCCAAAGCC 59.829 55.000 0.00 0.00 32.18 4.35
1966 4459 1.305219 TTCGCATCTTCCCAAAGCCG 61.305 55.000 0.00 0.00 32.18 5.52
1970 4463 0.447801 CATCTTCCCAAAGCCGAACG 59.552 55.000 0.00 0.00 32.18 3.95
1971 4464 0.036306 ATCTTCCCAAAGCCGAACGT 59.964 50.000 0.00 0.00 32.18 3.99
1972 4465 0.601841 TCTTCCCAAAGCCGAACGTC 60.602 55.000 0.00 0.00 32.18 4.34
1973 4466 0.602905 CTTCCCAAAGCCGAACGTCT 60.603 55.000 0.00 0.00 0.00 4.18
1974 4467 0.179040 TTCCCAAAGCCGAACGTCTT 60.179 50.000 0.00 0.00 0.00 3.01
1975 4468 0.601841 TCCCAAAGCCGAACGTCTTC 60.602 55.000 0.00 0.00 0.00 2.87
1979 4472 2.602217 CCAAAGCCGAACGTCTTCTTTG 60.602 50.000 17.89 17.89 41.71 2.77
1985 4478 3.121092 GCCGAACGTCTTCTTTGAACTAC 60.121 47.826 0.00 0.00 0.00 2.73
2012 4505 4.192429 AGGCAAATGATTAACACAAGCC 57.808 40.909 13.10 13.10 40.02 4.35
2032 4675 8.257306 ACAAGCCTGTAGAAAAGAAAATTTGAA 58.743 29.630 0.00 0.00 32.54 2.69
2047 4690 9.612066 AGAAAATTTGAAGCTGGTTTATTTTGA 57.388 25.926 17.53 0.00 0.00 2.69
2048 4691 9.868389 GAAAATTTGAAGCTGGTTTATTTTGAG 57.132 29.630 17.53 0.00 0.00 3.02
2049 4692 7.425577 AATTTGAAGCTGGTTTATTTTGAGC 57.574 32.000 0.00 0.00 0.00 4.26
2050 4693 5.528043 TTGAAGCTGGTTTATTTTGAGCA 57.472 34.783 0.00 0.00 31.80 4.26
2056 4699 7.425577 AGCTGGTTTATTTTGAGCAATTTTC 57.574 32.000 0.00 0.00 31.80 2.29
2057 4700 6.991531 AGCTGGTTTATTTTGAGCAATTTTCA 59.008 30.769 0.00 0.00 31.80 2.69
2058 4701 7.172019 AGCTGGTTTATTTTGAGCAATTTTCAG 59.828 33.333 0.00 0.00 31.80 3.02
2059 4702 7.041848 GCTGGTTTATTTTGAGCAATTTTCAGT 60.042 33.333 0.00 0.00 0.00 3.41
2060 4703 8.140677 TGGTTTATTTTGAGCAATTTTCAGTG 57.859 30.769 0.00 0.00 0.00 3.66
2068 4711 6.494893 TGAGCAATTTTCAGTGGTACATAC 57.505 37.500 0.00 0.00 44.52 2.39
2076 4719 6.921486 TTTCAGTGGTACATACTTCAGGTA 57.079 37.500 0.00 0.00 44.52 3.08
2094 4737 7.584122 TCAGGTAGTTGGAGAAGACATATAC 57.416 40.000 0.00 0.00 0.00 1.47
2095 4738 7.355101 TCAGGTAGTTGGAGAAGACATATACT 58.645 38.462 0.00 0.00 0.00 2.12
2096 4739 7.502895 TCAGGTAGTTGGAGAAGACATATACTC 59.497 40.741 0.00 0.00 0.00 2.59
2097 4740 6.778559 AGGTAGTTGGAGAAGACATATACTCC 59.221 42.308 0.00 0.00 46.16 3.85
2098 4741 6.015265 GGTAGTTGGAGAAGACATATACTCCC 60.015 46.154 0.00 0.00 45.61 4.30
2099 4742 5.782925 AGTTGGAGAAGACATATACTCCCT 58.217 41.667 0.00 0.00 45.61 4.20
2100 4743 5.836358 AGTTGGAGAAGACATATACTCCCTC 59.164 44.000 0.00 0.00 45.61 4.30
2101 4744 4.742012 TGGAGAAGACATATACTCCCTCC 58.258 47.826 0.00 15.43 45.61 4.30
2102 4745 3.759618 GGAGAAGACATATACTCCCTCCG 59.240 52.174 0.00 0.00 41.89 4.63
2103 4746 4.506979 GGAGAAGACATATACTCCCTCCGA 60.507 50.000 0.00 0.00 41.89 4.55
2104 4747 5.258051 GAGAAGACATATACTCCCTCCGAT 58.742 45.833 0.00 0.00 0.00 4.18
2105 4748 5.258051 AGAAGACATATACTCCCTCCGATC 58.742 45.833 0.00 0.00 0.00 3.69
2106 4749 3.970842 AGACATATACTCCCTCCGATCC 58.029 50.000 0.00 0.00 0.00 3.36
2107 4750 3.333980 AGACATATACTCCCTCCGATCCA 59.666 47.826 0.00 0.00 0.00 3.41
2108 4751 4.087182 GACATATACTCCCTCCGATCCAA 58.913 47.826 0.00 0.00 0.00 3.53
2109 4752 4.489737 ACATATACTCCCTCCGATCCAAA 58.510 43.478 0.00 0.00 0.00 3.28
2110 4753 4.905456 ACATATACTCCCTCCGATCCAAAA 59.095 41.667 0.00 0.00 0.00 2.44
2111 4754 5.548056 ACATATACTCCCTCCGATCCAAAAT 59.452 40.000 0.00 0.00 0.00 1.82
2112 4755 6.729100 ACATATACTCCCTCCGATCCAAAATA 59.271 38.462 0.00 0.00 0.00 1.40
2113 4756 5.746990 ATACTCCCTCCGATCCAAAATAG 57.253 43.478 0.00 0.00 0.00 1.73
2114 4757 3.654273 ACTCCCTCCGATCCAAAATAGA 58.346 45.455 0.00 0.00 0.00 1.98
2115 4758 4.235372 ACTCCCTCCGATCCAAAATAGAT 58.765 43.478 0.00 0.00 0.00 1.98
2116 4759 4.040952 ACTCCCTCCGATCCAAAATAGATG 59.959 45.833 0.00 0.00 0.00 2.90
2117 4760 4.231273 TCCCTCCGATCCAAAATAGATGA 58.769 43.478 0.00 0.00 0.00 2.92
2118 4761 4.040461 TCCCTCCGATCCAAAATAGATGAC 59.960 45.833 0.00 0.00 0.00 3.06
2119 4762 4.319177 CCTCCGATCCAAAATAGATGACC 58.681 47.826 0.00 0.00 0.00 4.02
2120 4763 4.319177 CTCCGATCCAAAATAGATGACCC 58.681 47.826 0.00 0.00 0.00 4.46
2121 4764 3.714280 TCCGATCCAAAATAGATGACCCA 59.286 43.478 0.00 0.00 0.00 4.51
2122 4765 4.165180 TCCGATCCAAAATAGATGACCCAA 59.835 41.667 0.00 0.00 0.00 4.12
2123 4766 4.275936 CCGATCCAAAATAGATGACCCAAC 59.724 45.833 0.00 0.00 0.00 3.77
2124 4767 5.126067 CGATCCAAAATAGATGACCCAACT 58.874 41.667 0.00 0.00 0.00 3.16
2125 4768 5.590259 CGATCCAAAATAGATGACCCAACTT 59.410 40.000 0.00 0.00 0.00 2.66
2126 4769 6.095440 CGATCCAAAATAGATGACCCAACTTT 59.905 38.462 0.00 0.00 0.00 2.66
2127 4770 6.588719 TCCAAAATAGATGACCCAACTTTG 57.411 37.500 0.00 0.00 0.00 2.77
2128 4771 6.074648 TCCAAAATAGATGACCCAACTTTGT 58.925 36.000 0.00 0.00 0.00 2.83
2129 4772 7.235079 TCCAAAATAGATGACCCAACTTTGTA 58.765 34.615 0.00 0.00 0.00 2.41
2130 4773 7.175990 TCCAAAATAGATGACCCAACTTTGTAC 59.824 37.037 0.00 0.00 0.00 2.90
2131 4774 7.176690 CCAAAATAGATGACCCAACTTTGTACT 59.823 37.037 0.00 0.00 0.00 2.73
2132 4775 9.226606 CAAAATAGATGACCCAACTTTGTACTA 57.773 33.333 0.00 0.00 0.00 1.82
2133 4776 9.802039 AAAATAGATGACCCAACTTTGTACTAA 57.198 29.630 0.00 0.00 0.00 2.24
2134 4777 8.788325 AATAGATGACCCAACTTTGTACTAAC 57.212 34.615 0.00 0.00 0.00 2.34
2135 4778 6.435292 AGATGACCCAACTTTGTACTAACT 57.565 37.500 0.00 0.00 0.00 2.24
2136 4779 6.838382 AGATGACCCAACTTTGTACTAACTT 58.162 36.000 0.00 0.00 0.00 2.66
2137 4780 7.287810 AGATGACCCAACTTTGTACTAACTTT 58.712 34.615 0.00 0.00 0.00 2.66
2138 4781 6.687081 TGACCCAACTTTGTACTAACTTTG 57.313 37.500 0.00 0.00 0.00 2.77
2139 4782 6.181908 TGACCCAACTTTGTACTAACTTTGT 58.818 36.000 0.00 0.00 0.00 2.83
2140 4783 7.337167 TGACCCAACTTTGTACTAACTTTGTA 58.663 34.615 0.00 0.00 0.00 2.41
2141 4784 7.280652 TGACCCAACTTTGTACTAACTTTGTAC 59.719 37.037 6.58 6.58 40.27 2.90
2142 4785 7.341030 ACCCAACTTTGTACTAACTTTGTACT 58.659 34.615 12.73 0.00 40.44 2.73
2143 4786 8.485392 ACCCAACTTTGTACTAACTTTGTACTA 58.515 33.333 12.73 4.86 40.44 1.82
2144 4787 9.328845 CCCAACTTTGTACTAACTTTGTACTAA 57.671 33.333 12.73 10.75 40.44 2.24
2165 4808 7.567458 ACTAAAGTTAGTACAAAGTTGGGTCA 58.433 34.615 1.81 0.00 41.92 4.02
2166 4809 8.215736 ACTAAAGTTAGTACAAAGTTGGGTCAT 58.784 33.333 1.81 0.00 41.92 3.06
2167 4810 7.506328 AAAGTTAGTACAAAGTTGGGTCATC 57.494 36.000 0.00 0.00 0.00 2.92
2168 4811 6.435292 AGTTAGTACAAAGTTGGGTCATCT 57.565 37.500 0.00 0.00 0.00 2.90
2169 4812 7.549147 AGTTAGTACAAAGTTGGGTCATCTA 57.451 36.000 0.00 0.00 0.00 1.98
2170 4813 8.147244 AGTTAGTACAAAGTTGGGTCATCTAT 57.853 34.615 0.00 0.00 0.00 1.98
2171 4814 8.603304 AGTTAGTACAAAGTTGGGTCATCTATT 58.397 33.333 0.00 0.00 0.00 1.73
2172 4815 9.227777 GTTAGTACAAAGTTGGGTCATCTATTT 57.772 33.333 0.00 0.00 0.00 1.40
2175 4818 8.047310 AGTACAAAGTTGGGTCATCTATTTAGG 58.953 37.037 0.00 0.00 0.00 2.69
2176 4819 7.027874 ACAAAGTTGGGTCATCTATTTAGGA 57.972 36.000 0.00 0.00 0.00 2.94
2177 4820 7.466804 ACAAAGTTGGGTCATCTATTTAGGAA 58.533 34.615 0.00 0.00 0.00 3.36
2178 4821 7.393515 ACAAAGTTGGGTCATCTATTTAGGAAC 59.606 37.037 0.00 0.00 0.00 3.62
2179 4822 5.671493 AGTTGGGTCATCTATTTAGGAACG 58.329 41.667 0.00 0.00 0.00 3.95
2180 4823 4.682778 TGGGTCATCTATTTAGGAACGG 57.317 45.455 0.00 0.00 0.00 4.44
2181 4824 4.291792 TGGGTCATCTATTTAGGAACGGA 58.708 43.478 0.00 0.00 0.00 4.69
2182 4825 4.344102 TGGGTCATCTATTTAGGAACGGAG 59.656 45.833 0.00 0.00 0.00 4.63
2183 4826 4.262506 GGGTCATCTATTTAGGAACGGAGG 60.263 50.000 0.00 0.00 0.00 4.30
2184 4827 4.308265 GTCATCTATTTAGGAACGGAGGC 58.692 47.826 0.00 0.00 0.00 4.70
2185 4828 3.964688 TCATCTATTTAGGAACGGAGGCA 59.035 43.478 0.00 0.00 0.00 4.75
2186 4829 4.039245 TCATCTATTTAGGAACGGAGGCAG 59.961 45.833 0.00 0.00 0.00 4.85
2187 4830 3.371965 TCTATTTAGGAACGGAGGCAGT 58.628 45.455 0.00 0.00 0.00 4.40
2188 4831 4.539726 TCTATTTAGGAACGGAGGCAGTA 58.460 43.478 0.00 0.00 0.00 2.74
2194 4837 1.653151 GAACGGAGGCAGTAATGACC 58.347 55.000 0.00 0.00 0.00 4.02
2197 4840 1.338769 ACGGAGGCAGTAATGACCAAC 60.339 52.381 0.00 0.00 0.00 3.77
2203 4846 4.079253 AGGCAGTAATGACCAACGAAAAT 58.921 39.130 0.00 0.00 0.00 1.82
2204 4847 4.522789 AGGCAGTAATGACCAACGAAAATT 59.477 37.500 0.00 0.00 0.00 1.82
2205 4848 5.010617 AGGCAGTAATGACCAACGAAAATTT 59.989 36.000 0.00 0.00 0.00 1.82
2206 4849 5.118510 GGCAGTAATGACCAACGAAAATTTG 59.881 40.000 0.00 0.00 0.00 2.32
2207 4850 5.689961 GCAGTAATGACCAACGAAAATTTGT 59.310 36.000 0.00 0.00 0.00 2.83
2208 4851 6.200097 GCAGTAATGACCAACGAAAATTTGTT 59.800 34.615 0.00 0.00 35.19 2.83
2209 4852 7.254286 GCAGTAATGACCAACGAAAATTTGTTT 60.254 33.333 0.00 0.00 32.57 2.83
2210 4853 8.599774 CAGTAATGACCAACGAAAATTTGTTTT 58.400 29.630 0.00 0.00 32.57 2.43
2211 4854 8.599774 AGTAATGACCAACGAAAATTTGTTTTG 58.400 29.630 0.00 0.00 32.57 2.44
2212 4855 6.976636 ATGACCAACGAAAATTTGTTTTGT 57.023 29.167 0.00 0.00 32.57 2.83
2213 4856 6.158175 TGACCAACGAAAATTTGTTTTGTG 57.842 33.333 0.00 0.00 32.57 3.33
2214 4857 5.926542 TGACCAACGAAAATTTGTTTTGTGA 59.073 32.000 0.00 0.00 32.57 3.58
2215 4858 6.423905 TGACCAACGAAAATTTGTTTTGTGAA 59.576 30.769 0.00 0.00 32.57 3.18
2216 4859 7.118390 TGACCAACGAAAATTTGTTTTGTGAAT 59.882 29.630 0.00 0.00 32.57 2.57
2217 4860 7.811653 ACCAACGAAAATTTGTTTTGTGAATT 58.188 26.923 0.00 0.00 32.57 2.17
2218 4861 7.748241 ACCAACGAAAATTTGTTTTGTGAATTG 59.252 29.630 0.00 0.00 32.57 2.32
2219 4862 7.748241 CCAACGAAAATTTGTTTTGTGAATTGT 59.252 29.630 0.00 0.00 32.57 2.71
2220 4863 8.565583 CAACGAAAATTTGTTTTGTGAATTGTG 58.434 29.630 0.00 0.00 32.57 3.33
2221 4864 7.801752 ACGAAAATTTGTTTTGTGAATTGTGT 58.198 26.923 0.00 0.00 0.00 3.72
2222 4865 8.286097 ACGAAAATTTGTTTTGTGAATTGTGTT 58.714 25.926 0.00 0.00 0.00 3.32
2282 4926 4.163078 AGGGATGTTGAATCAGTAGAGTGG 59.837 45.833 0.00 0.00 0.00 4.00
2298 4942 8.517878 CAGTAGAGTGGACAATCAATCAAAATT 58.482 33.333 2.48 0.00 34.59 1.82
2299 4943 8.734386 AGTAGAGTGGACAATCAATCAAAATTC 58.266 33.333 2.48 0.00 34.59 2.17
2303 4947 7.830739 AGTGGACAATCAATCAAAATTCTACC 58.169 34.615 0.00 0.00 0.00 3.18
2304 4948 7.035612 GTGGACAATCAATCAAAATTCTACCC 58.964 38.462 0.00 0.00 0.00 3.69
2306 4950 8.112822 TGGACAATCAATCAAAATTCTACCCTA 58.887 33.333 0.00 0.00 0.00 3.53
2309 4959 9.699410 ACAATCAATCAAAATTCTACCCTATGA 57.301 29.630 0.00 0.00 0.00 2.15
2317 4967 5.455056 AATTCTACCCTATGAGTAGCACG 57.545 43.478 0.00 0.00 37.67 5.34
2321 4971 2.453521 ACCCTATGAGTAGCACGAACA 58.546 47.619 0.00 0.00 0.00 3.18
2388 5069 6.126409 TGGGACTTAACTGTCTGAACAAAAT 58.874 36.000 0.00 0.00 37.16 1.82
2389 5070 7.284074 TGGGACTTAACTGTCTGAACAAAATA 58.716 34.615 0.00 0.00 37.16 1.40
2390 5071 7.227910 TGGGACTTAACTGTCTGAACAAAATAC 59.772 37.037 0.00 0.00 37.16 1.89
2428 5116 3.024547 TCTGCTGTACACATAGGTCTCC 58.975 50.000 0.00 0.00 0.00 3.71
2468 5157 5.208463 AGCTTCCACTATTTAGCTAGCTC 57.792 43.478 23.26 1.39 41.87 4.09
2470 5159 4.500035 GCTTCCACTATTTAGCTAGCTCGT 60.500 45.833 23.26 10.98 0.00 4.18
2644 5346 3.777478 AGTATTTACCGACACATCACCG 58.223 45.455 0.00 0.00 0.00 4.94
2687 5389 1.139095 CGGGACCTCGCTGTCTAAC 59.861 63.158 0.00 0.00 35.54 2.34
2750 5452 3.253921 TCACCAATCTGTTCATTGTGCTG 59.746 43.478 0.00 0.00 32.61 4.41
2798 5500 0.321475 ACAAAGCAGAGGAGAGCAGC 60.321 55.000 0.00 0.00 0.00 5.25
2852 5554 5.124645 AGTTCAGTATAGGTACTCTCACCG 58.875 45.833 0.00 0.00 43.84 4.94
2865 5567 0.251608 CTCACCGGTTCCCCCAAATT 60.252 55.000 2.97 0.00 0.00 1.82
2901 5607 1.248486 GAGAACCTTTTCCTGGTGCC 58.752 55.000 0.00 0.00 37.93 5.01
2919 5625 3.125829 GTGCCTGTAGTGATGACATTGTG 59.874 47.826 0.00 0.00 0.00 3.33
2932 5645 2.146342 ACATTGTGCTGTAGTGAGTGC 58.854 47.619 0.00 0.00 0.00 4.40
3084 5834 3.364460 TGCAGTGGCCAGTGTATTATT 57.636 42.857 35.27 0.00 40.13 1.40
3096 5851 7.015001 GGCCAGTGTATTATTACCACTACTAGT 59.985 40.741 0.00 0.00 0.00 2.57
3097 5852 9.071276 GCCAGTGTATTATTACCACTACTAGTA 57.929 37.037 1.89 1.89 0.00 1.82
3179 5937 7.536895 TCACGAGTCTGAATCTAAGTACTAC 57.463 40.000 0.00 0.00 0.00 2.73
3180 5938 7.329499 TCACGAGTCTGAATCTAAGTACTACT 58.671 38.462 0.00 0.00 0.00 2.57
3181 5939 8.473219 TCACGAGTCTGAATCTAAGTACTACTA 58.527 37.037 0.00 0.00 0.00 1.82
3721 6856 4.457496 CTGCATCGACGCCACCCT 62.457 66.667 0.00 0.00 0.00 4.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 7.811236 CCGTTCCCTTAAATTTTTAGAAACCTC 59.189 37.037 0.00 0.00 0.00 3.85
6 7 6.366877 GCCGTTCCCTTAAATTTTTAGAAACC 59.633 38.462 0.00 0.00 0.00 3.27
8 9 6.041751 TGGCCGTTCCCTTAAATTTTTAGAAA 59.958 34.615 0.00 0.00 0.00 2.52
9 10 5.539193 TGGCCGTTCCCTTAAATTTTTAGAA 59.461 36.000 0.00 0.00 0.00 2.10
10 11 5.078256 TGGCCGTTCCCTTAAATTTTTAGA 58.922 37.500 0.00 0.00 0.00 2.10
11 12 5.394224 TGGCCGTTCCCTTAAATTTTTAG 57.606 39.130 0.00 0.00 0.00 1.85
13 14 4.041075 ACATGGCCGTTCCCTTAAATTTTT 59.959 37.500 0.00 0.00 0.00 1.94
15 16 3.056179 CACATGGCCGTTCCCTTAAATTT 60.056 43.478 0.00 0.00 0.00 1.82
16 17 2.495669 CACATGGCCGTTCCCTTAAATT 59.504 45.455 0.00 0.00 0.00 1.82
17 18 2.099405 CACATGGCCGTTCCCTTAAAT 58.901 47.619 0.00 0.00 0.00 1.40
18 19 1.540267 CACATGGCCGTTCCCTTAAA 58.460 50.000 0.00 0.00 0.00 1.52
19 20 0.963355 GCACATGGCCGTTCCCTTAA 60.963 55.000 0.00 0.00 36.11 1.85
21 22 2.676471 GCACATGGCCGTTCCCTT 60.676 61.111 0.00 0.00 36.11 3.95
22 23 3.286694 ATGCACATGGCCGTTCCCT 62.287 57.895 0.00 0.00 43.89 4.20
23 24 2.755469 ATGCACATGGCCGTTCCC 60.755 61.111 0.00 0.00 43.89 3.97
24 25 1.594194 TTGATGCACATGGCCGTTCC 61.594 55.000 0.00 0.00 43.89 3.62
26 27 0.678395 TTTTGATGCACATGGCCGTT 59.322 45.000 0.00 0.00 43.89 4.44
27 28 0.244450 CTTTTGATGCACATGGCCGT 59.756 50.000 0.00 0.00 43.89 5.68
30 31 3.928375 CCTAAACTTTTGATGCACATGGC 59.072 43.478 0.00 0.00 45.13 4.40
32 33 6.258230 TCTCCTAAACTTTTGATGCACATG 57.742 37.500 0.00 0.00 0.00 3.21
33 34 6.071728 CCTTCTCCTAAACTTTTGATGCACAT 60.072 38.462 0.00 0.00 0.00 3.21
34 35 5.241506 CCTTCTCCTAAACTTTTGATGCACA 59.758 40.000 0.00 0.00 0.00 4.57
35 36 5.335976 CCCTTCTCCTAAACTTTTGATGCAC 60.336 44.000 0.00 0.00 0.00 4.57
36 37 4.766891 CCCTTCTCCTAAACTTTTGATGCA 59.233 41.667 0.00 0.00 0.00 3.96
37 38 4.380973 GCCCTTCTCCTAAACTTTTGATGC 60.381 45.833 0.00 0.00 0.00 3.91
39 40 5.262455 AGCCCTTCTCCTAAACTTTTGAT 57.738 39.130 0.00 0.00 0.00 2.57
40 41 4.724279 AGCCCTTCTCCTAAACTTTTGA 57.276 40.909 0.00 0.00 0.00 2.69
41 42 4.944317 CCTAGCCCTTCTCCTAAACTTTTG 59.056 45.833 0.00 0.00 0.00 2.44
42 43 4.602294 ACCTAGCCCTTCTCCTAAACTTTT 59.398 41.667 0.00 0.00 0.00 2.27
44 45 3.804550 ACCTAGCCCTTCTCCTAAACTT 58.195 45.455 0.00 0.00 0.00 2.66
45 46 3.493475 ACCTAGCCCTTCTCCTAAACT 57.507 47.619 0.00 0.00 0.00 2.66
46 47 3.067883 CGTACCTAGCCCTTCTCCTAAAC 59.932 52.174 0.00 0.00 0.00 2.01
47 48 3.294214 CGTACCTAGCCCTTCTCCTAAA 58.706 50.000 0.00 0.00 0.00 1.85
48 49 2.941480 CGTACCTAGCCCTTCTCCTAA 58.059 52.381 0.00 0.00 0.00 2.69
49 50 1.478288 GCGTACCTAGCCCTTCTCCTA 60.478 57.143 0.00 0.00 0.00 2.94
50 51 0.756070 GCGTACCTAGCCCTTCTCCT 60.756 60.000 0.00 0.00 0.00 3.69
59 60 3.999001 ACTAAACTTTTGGCGTACCTAGC 59.001 43.478 0.00 0.00 36.63 3.42
60 61 5.476614 AGACTAAACTTTTGGCGTACCTAG 58.523 41.667 0.00 0.00 36.63 3.02
61 62 5.473066 AGACTAAACTTTTGGCGTACCTA 57.527 39.130 0.00 0.00 36.63 3.08
63 64 9.702494 ATATATAGACTAAACTTTTGGCGTACC 57.298 33.333 0.00 0.00 0.00 3.34
67 68 9.878599 CCAAATATATAGACTAAACTTTTGGCG 57.121 33.333 13.16 0.00 35.61 5.69
86 87 8.814448 TCTCTCTATCCTTTAACCCCAAATAT 57.186 34.615 0.00 0.00 0.00 1.28
87 88 7.292591 CCTCTCTCTATCCTTTAACCCCAAATA 59.707 40.741 0.00 0.00 0.00 1.40
88 89 6.101881 CCTCTCTCTATCCTTTAACCCCAAAT 59.898 42.308 0.00 0.00 0.00 2.32
90 91 4.969359 CCTCTCTCTATCCTTTAACCCCAA 59.031 45.833 0.00 0.00 0.00 4.12
91 92 4.015541 ACCTCTCTCTATCCTTTAACCCCA 60.016 45.833 0.00 0.00 0.00 4.96
92 93 4.558715 ACCTCTCTCTATCCTTTAACCCC 58.441 47.826 0.00 0.00 0.00 4.95
96 97 9.268282 ACATGTAAACCTCTCTCTATCCTTTAA 57.732 33.333 0.00 0.00 0.00 1.52
98 99 7.741554 ACATGTAAACCTCTCTCTATCCTTT 57.258 36.000 0.00 0.00 0.00 3.11
99 100 8.840200 TTACATGTAAACCTCTCTCTATCCTT 57.160 34.615 15.92 0.00 0.00 3.36
100 101 8.840200 TTTACATGTAAACCTCTCTCTATCCT 57.160 34.615 23.91 0.00 30.78 3.24
107 108 8.993424 ACCTATCATTTACATGTAAACCTCTCT 58.007 33.333 28.62 12.53 37.80 3.10
113 114 9.946165 GCCTTTACCTATCATTTACATGTAAAC 57.054 33.333 28.62 10.60 37.80 2.01
114 115 9.914834 AGCCTTTACCTATCATTTACATGTAAA 57.085 29.630 28.30 28.30 39.12 2.01
117 118 8.157476 CCTAGCCTTTACCTATCATTTACATGT 58.843 37.037 2.69 2.69 0.00 3.21
118 119 7.607991 CCCTAGCCTTTACCTATCATTTACATG 59.392 40.741 0.00 0.00 0.00 3.21
120 121 6.847567 TCCCTAGCCTTTACCTATCATTTACA 59.152 38.462 0.00 0.00 0.00 2.41
122 123 7.528881 GCATCCCTAGCCTTTACCTATCATTTA 60.529 40.741 0.00 0.00 0.00 1.40
124 125 5.280727 GCATCCCTAGCCTTTACCTATCATT 60.281 44.000 0.00 0.00 0.00 2.57
125 126 4.226168 GCATCCCTAGCCTTTACCTATCAT 59.774 45.833 0.00 0.00 0.00 2.45
126 127 3.583086 GCATCCCTAGCCTTTACCTATCA 59.417 47.826 0.00 0.00 0.00 2.15
127 128 3.841255 AGCATCCCTAGCCTTTACCTATC 59.159 47.826 0.00 0.00 0.00 2.08
128 129 3.875571 AGCATCCCTAGCCTTTACCTAT 58.124 45.455 0.00 0.00 0.00 2.57
129 130 3.346146 AGCATCCCTAGCCTTTACCTA 57.654 47.619 0.00 0.00 0.00 3.08
132 133 3.886123 TCAAAGCATCCCTAGCCTTTAC 58.114 45.455 0.00 0.00 0.00 2.01
133 134 4.796110 ATCAAAGCATCCCTAGCCTTTA 57.204 40.909 0.00 0.00 0.00 1.85
134 135 3.677156 ATCAAAGCATCCCTAGCCTTT 57.323 42.857 0.00 0.00 0.00 3.11
136 137 3.321950 ACTATCAAAGCATCCCTAGCCT 58.678 45.455 0.00 0.00 0.00 4.58
138 139 6.467677 TGAATACTATCAAAGCATCCCTAGC 58.532 40.000 0.00 0.00 0.00 3.42
139 140 8.908786 TTTGAATACTATCAAAGCATCCCTAG 57.091 34.615 0.00 0.00 42.68 3.02
141 142 7.836183 ACTTTTGAATACTATCAAAGCATCCCT 59.164 33.333 3.10 0.00 46.63 4.20
143 144 9.860898 AAACTTTTGAATACTATCAAAGCATCC 57.139 29.630 3.10 0.00 46.63 3.51
154 155 9.802039 AGGGACAATACAAACTTTTGAATACTA 57.198 29.630 8.69 0.00 40.55 1.82
158 159 9.758651 GTTTAGGGACAATACAAACTTTTGAAT 57.241 29.630 8.69 0.00 40.55 2.57
159 160 8.973182 AGTTTAGGGACAATACAAACTTTTGAA 58.027 29.630 8.69 0.00 40.55 2.69
160 161 8.528044 AGTTTAGGGACAATACAAACTTTTGA 57.472 30.769 8.69 0.00 40.55 2.69
163 164 8.573885 GCTTAGTTTAGGGACAATACAAACTTT 58.426 33.333 3.63 0.00 39.47 2.66
164 165 7.176165 GGCTTAGTTTAGGGACAATACAAACTT 59.824 37.037 3.63 0.00 39.47 2.66
165 166 6.657966 GGCTTAGTTTAGGGACAATACAAACT 59.342 38.462 0.00 0.00 41.15 2.66
166 167 6.657966 AGGCTTAGTTTAGGGACAATACAAAC 59.342 38.462 0.00 0.00 0.00 2.93
167 168 6.786122 AGGCTTAGTTTAGGGACAATACAAA 58.214 36.000 0.00 0.00 0.00 2.83
168 169 6.382919 AGGCTTAGTTTAGGGACAATACAA 57.617 37.500 0.00 0.00 0.00 2.41
169 170 5.104652 GGAGGCTTAGTTTAGGGACAATACA 60.105 44.000 0.00 0.00 0.00 2.29
171 172 5.034200 TGGAGGCTTAGTTTAGGGACAATA 58.966 41.667 0.00 0.00 0.00 1.90
173 174 3.253220 TGGAGGCTTAGTTTAGGGACAA 58.747 45.455 0.00 0.00 0.00 3.18
174 175 2.910544 TGGAGGCTTAGTTTAGGGACA 58.089 47.619 0.00 0.00 0.00 4.02
175 176 3.994931 TTGGAGGCTTAGTTTAGGGAC 57.005 47.619 0.00 0.00 0.00 4.46
177 178 4.164221 TCTCATTGGAGGCTTAGTTTAGGG 59.836 45.833 0.00 0.00 41.69 3.53
178 179 5.359194 TCTCATTGGAGGCTTAGTTTAGG 57.641 43.478 0.00 0.00 41.69 2.69
179 180 5.295540 GCTTCTCATTGGAGGCTTAGTTTAG 59.704 44.000 0.00 0.00 41.69 1.85
180 181 5.045578 AGCTTCTCATTGGAGGCTTAGTTTA 60.046 40.000 6.11 0.00 44.35 2.01
181 182 4.013050 GCTTCTCATTGGAGGCTTAGTTT 58.987 43.478 0.00 0.00 41.69 2.66
182 183 3.265479 AGCTTCTCATTGGAGGCTTAGTT 59.735 43.478 6.11 0.00 44.35 2.24
184 185 3.557228 AGCTTCTCATTGGAGGCTTAG 57.443 47.619 6.11 0.00 44.35 2.18
185 186 5.435686 TTTAGCTTCTCATTGGAGGCTTA 57.564 39.130 13.92 5.80 44.35 3.09
186 187 4.307032 TTTAGCTTCTCATTGGAGGCTT 57.693 40.909 13.92 3.44 44.35 4.35
188 189 6.699575 TTTATTTAGCTTCTCATTGGAGGC 57.300 37.500 0.00 0.00 41.69 4.70
211 212 9.211485 CTCAATTTTTGCAGATGGAGTATTTTT 57.789 29.630 0.00 0.00 0.00 1.94
212 213 8.587608 TCTCAATTTTTGCAGATGGAGTATTTT 58.412 29.630 9.63 0.00 0.00 1.82
213 214 8.125978 TCTCAATTTTTGCAGATGGAGTATTT 57.874 30.769 9.63 0.00 0.00 1.40
214 215 7.707624 TCTCAATTTTTGCAGATGGAGTATT 57.292 32.000 9.63 0.00 0.00 1.89
215 216 7.395489 AGTTCTCAATTTTTGCAGATGGAGTAT 59.605 33.333 9.63 0.00 0.00 2.12
216 217 6.716628 AGTTCTCAATTTTTGCAGATGGAGTA 59.283 34.615 9.63 0.97 0.00 2.59
217 218 5.537674 AGTTCTCAATTTTTGCAGATGGAGT 59.462 36.000 9.63 0.00 0.00 3.85
218 219 6.022163 AGTTCTCAATTTTTGCAGATGGAG 57.978 37.500 5.33 5.33 0.00 3.86
219 220 6.409524 AAGTTCTCAATTTTTGCAGATGGA 57.590 33.333 0.00 0.00 0.00 3.41
220 221 7.486802 AAAAGTTCTCAATTTTTGCAGATGG 57.513 32.000 0.00 0.00 30.43 3.51
221 222 9.853921 GTTAAAAGTTCTCAATTTTTGCAGATG 57.146 29.630 0.00 0.00 33.25 2.90
222 223 9.598517 TGTTAAAAGTTCTCAATTTTTGCAGAT 57.401 25.926 0.00 0.00 33.25 2.90
223 224 8.994429 TGTTAAAAGTTCTCAATTTTTGCAGA 57.006 26.923 0.00 0.00 33.25 4.26
289 290 5.945310 ACCATTAGATAGACCATGCAATGT 58.055 37.500 0.00 0.00 44.81 2.71
342 343 6.136541 ACTTTGATCAAGTTTGTGGAGAAC 57.863 37.500 8.41 0.00 43.89 3.01
362 363 9.974980 TTTCTTTAAGTCAAACTTCACAAACTT 57.025 25.926 0.00 0.00 39.51 2.66
383 384 6.449635 TGCAGGCGTGAATATAATTTTCTT 57.550 33.333 11.29 0.00 0.00 2.52
420 444 5.948162 ACTGCCATGAAGTTCATTAATGACT 59.052 36.000 17.76 14.41 34.28 3.41
494 518 7.439955 TCACGTATCAGTATTGTTTTTCAGTGT 59.560 33.333 0.00 0.00 0.00 3.55
495 519 7.740346 GTCACGTATCAGTATTGTTTTTCAGTG 59.260 37.037 0.00 0.00 0.00 3.66
496 520 7.095355 GGTCACGTATCAGTATTGTTTTTCAGT 60.095 37.037 0.00 0.00 0.00 3.41
497 521 7.095397 TGGTCACGTATCAGTATTGTTTTTCAG 60.095 37.037 0.00 0.00 0.00 3.02
498 522 6.706716 TGGTCACGTATCAGTATTGTTTTTCA 59.293 34.615 0.00 0.00 0.00 2.69
499 523 7.124347 TGGTCACGTATCAGTATTGTTTTTC 57.876 36.000 0.00 0.00 0.00 2.29
500 524 7.499321 TTGGTCACGTATCAGTATTGTTTTT 57.501 32.000 0.00 0.00 0.00 1.94
501 525 7.499321 TTTGGTCACGTATCAGTATTGTTTT 57.501 32.000 0.00 0.00 0.00 2.43
502 526 7.606456 AGATTTGGTCACGTATCAGTATTGTTT 59.394 33.333 0.00 0.00 0.00 2.83
503 527 7.064609 CAGATTTGGTCACGTATCAGTATTGTT 59.935 37.037 0.00 0.00 0.00 2.83
504 528 6.535150 CAGATTTGGTCACGTATCAGTATTGT 59.465 38.462 0.00 0.00 0.00 2.71
505 529 6.018751 CCAGATTTGGTCACGTATCAGTATTG 60.019 42.308 0.00 0.00 39.79 1.90
506 530 6.049149 CCAGATTTGGTCACGTATCAGTATT 58.951 40.000 0.00 0.00 39.79 1.89
507 531 5.601662 CCAGATTTGGTCACGTATCAGTAT 58.398 41.667 0.00 0.00 39.79 2.12
508 532 5.006153 CCAGATTTGGTCACGTATCAGTA 57.994 43.478 0.00 0.00 39.79 2.74
509 533 3.861840 CCAGATTTGGTCACGTATCAGT 58.138 45.455 0.00 0.00 39.79 3.41
551 575 1.579429 GCACGTTTAGCCTTGGGTG 59.421 57.895 1.12 0.00 0.00 4.61
576 600 1.154413 GTTGTGATTGCTCGTGCCG 60.154 57.895 7.05 0.00 38.71 5.69
584 608 5.922546 TGTTAGTAATCGTGTTGTGATTGC 58.077 37.500 0.00 0.00 38.31 3.56
586 610 6.708949 ACCTTGTTAGTAATCGTGTTGTGATT 59.291 34.615 0.00 0.00 39.32 2.57
587 611 6.228258 ACCTTGTTAGTAATCGTGTTGTGAT 58.772 36.000 0.00 0.00 0.00 3.06
588 612 5.603596 ACCTTGTTAGTAATCGTGTTGTGA 58.396 37.500 0.00 0.00 0.00 3.58
589 613 5.388061 CGACCTTGTTAGTAATCGTGTTGTG 60.388 44.000 0.00 0.00 0.00 3.33
590 614 4.682860 CGACCTTGTTAGTAATCGTGTTGT 59.317 41.667 0.00 0.00 0.00 3.32
596 620 2.601763 GCCACGACCTTGTTAGTAATCG 59.398 50.000 0.00 2.16 35.74 3.34
598 622 2.028748 ACGCCACGACCTTGTTAGTAAT 60.029 45.455 0.00 0.00 0.00 1.89
649 673 1.810412 CGTTTACTAGAGGGGCCATGC 60.810 57.143 4.39 0.00 0.00 4.06
650 674 1.202651 CCGTTTACTAGAGGGGCCATG 60.203 57.143 4.39 0.00 0.00 3.66
651 675 1.129058 CCGTTTACTAGAGGGGCCAT 58.871 55.000 4.39 0.00 0.00 4.40
652 676 0.979187 CCCGTTTACTAGAGGGGCCA 60.979 60.000 4.39 0.00 40.18 5.36
653 677 1.828081 CCCGTTTACTAGAGGGGCC 59.172 63.158 0.00 0.00 40.18 5.80
656 680 0.464452 CTGGCCCGTTTACTAGAGGG 59.536 60.000 0.00 2.26 46.44 4.30
685 709 1.039068 CAAGACATGTGGGCCAAACA 58.961 50.000 8.40 12.44 0.00 2.83
687 711 1.470996 GCCAAGACATGTGGGCCAAA 61.471 55.000 8.40 1.64 40.55 3.28
694 718 2.026641 CCCATTAGGCCAAGACATGTG 58.973 52.381 1.15 0.00 0.00 3.21
695 719 2.442236 CCCATTAGGCCAAGACATGT 57.558 50.000 5.01 0.00 0.00 3.21
773 797 3.049674 ACGTGCCGGCAAGACATG 61.050 61.111 42.39 23.41 0.00 3.21
774 798 3.049674 CACGTGCCGGCAAGACAT 61.050 61.111 42.39 22.30 0.00 3.06
805 829 0.107410 TGGTTATAAGCCGTGCCTGG 60.107 55.000 11.96 0.00 0.00 4.45
806 830 1.603802 CATGGTTATAAGCCGTGCCTG 59.396 52.381 11.96 0.00 36.38 4.85
807 831 1.967319 CATGGTTATAAGCCGTGCCT 58.033 50.000 11.96 0.00 36.38 4.75
814 838 1.524008 GGCCCGGCATGGTTATAAGC 61.524 60.000 12.58 7.74 35.15 3.09
816 840 0.179004 CTGGCCCGGCATGGTTATAA 60.179 55.000 12.58 0.00 35.15 0.98
817 841 1.454104 CTGGCCCGGCATGGTTATA 59.546 57.895 12.58 0.00 35.15 0.98
819 843 4.122149 CCTGGCCCGGCATGGTTA 62.122 66.667 12.58 0.00 35.15 2.85
860 3274 2.124024 GCATGCCAGCCCATGAGA 60.124 61.111 6.36 0.00 44.12 3.27
939 3367 2.049156 CTCGCGTTGCTCTGTGGA 60.049 61.111 5.77 0.00 0.00 4.02
942 3370 4.299547 TGGCTCGCGTTGCTCTGT 62.300 61.111 21.30 0.00 0.00 3.41
943 3371 3.782244 GTGGCTCGCGTTGCTCTG 61.782 66.667 21.30 1.62 0.00 3.35
1063 3491 3.124686 CTCGAGGAGGTAGCTGCC 58.875 66.667 13.81 13.81 0.00 4.85
1122 3550 4.144703 GCGTTCCGTCCCCTCCTC 62.145 72.222 0.00 0.00 0.00 3.71
1368 3805 6.613233 ACTACTCTAGATTGACACGTGAAAG 58.387 40.000 25.01 8.17 0.00 2.62
1385 3822 2.158667 CCCCAACCACAACAACTACTCT 60.159 50.000 0.00 0.00 0.00 3.24
1386 3823 2.158726 TCCCCAACCACAACAACTACTC 60.159 50.000 0.00 0.00 0.00 2.59
1442 3881 2.826128 TCTGCTCTGGTAGTGTTACTGG 59.174 50.000 0.00 0.00 0.00 4.00
1448 3894 1.548269 GCTTCTCTGCTCTGGTAGTGT 59.452 52.381 0.00 0.00 0.00 3.55
1465 3911 4.217118 CCACTTCTACAATCTTTGCTGCTT 59.783 41.667 0.00 0.00 0.00 3.91
1475 3921 9.871238 TTCAGTTATCTAACCACTTCTACAATC 57.129 33.333 0.00 0.00 36.88 2.67
1479 3925 9.088512 CACATTCAGTTATCTAACCACTTCTAC 57.911 37.037 0.00 0.00 36.88 2.59
1539 3985 7.926555 AGTACTCACCCGATATGTAAAATTGAG 59.073 37.037 0.00 0.00 35.21 3.02
1549 3995 2.876550 TCGACAGTACTCACCCGATATG 59.123 50.000 0.00 0.00 0.00 1.78
1555 4001 0.818296 AGCATCGACAGTACTCACCC 59.182 55.000 0.00 0.00 0.00 4.61
1565 4011 1.262417 TTCTACACCCAGCATCGACA 58.738 50.000 0.00 0.00 0.00 4.35
1567 4013 3.055458 TCAATTTCTACACCCAGCATCGA 60.055 43.478 0.00 0.00 0.00 3.59
1576 4022 5.986135 AGCATCGTCTATCAATTTCTACACC 59.014 40.000 0.00 0.00 0.00 4.16
1578 4024 6.476706 CACAGCATCGTCTATCAATTTCTACA 59.523 38.462 0.00 0.00 0.00 2.74
1579 4025 6.477033 ACACAGCATCGTCTATCAATTTCTAC 59.523 38.462 0.00 0.00 0.00 2.59
1581 4027 5.292834 CACACAGCATCGTCTATCAATTTCT 59.707 40.000 0.00 0.00 0.00 2.52
1582 4028 5.063944 ACACACAGCATCGTCTATCAATTTC 59.936 40.000 0.00 0.00 0.00 2.17
1583 4029 4.937620 ACACACAGCATCGTCTATCAATTT 59.062 37.500 0.00 0.00 0.00 1.82
1584 4030 4.507710 ACACACAGCATCGTCTATCAATT 58.492 39.130 0.00 0.00 0.00 2.32
1585 4031 4.128925 ACACACAGCATCGTCTATCAAT 57.871 40.909 0.00 0.00 0.00 2.57
1586 4032 3.592898 ACACACAGCATCGTCTATCAA 57.407 42.857 0.00 0.00 0.00 2.57
1587 4033 3.945285 TCTACACACAGCATCGTCTATCA 59.055 43.478 0.00 0.00 0.00 2.15
1588 4034 4.553756 TCTACACACAGCATCGTCTATC 57.446 45.455 0.00 0.00 0.00 2.08
1589 4035 4.983671 TTCTACACACAGCATCGTCTAT 57.016 40.909 0.00 0.00 0.00 1.98
1590 4036 4.776795 TTTCTACACACAGCATCGTCTA 57.223 40.909 0.00 0.00 0.00 2.59
1591 4037 3.660501 TTTCTACACACAGCATCGTCT 57.339 42.857 0.00 0.00 0.00 4.18
1592 4038 4.388773 TCAATTTCTACACACAGCATCGTC 59.611 41.667 0.00 0.00 0.00 4.20
1593 4039 4.314961 TCAATTTCTACACACAGCATCGT 58.685 39.130 0.00 0.00 0.00 3.73
1594 4040 4.926860 TCAATTTCTACACACAGCATCG 57.073 40.909 0.00 0.00 0.00 3.84
1595 4041 7.227314 TCCATATCAATTTCTACACACAGCATC 59.773 37.037 0.00 0.00 0.00 3.91
1596 4042 7.056006 TCCATATCAATTTCTACACACAGCAT 58.944 34.615 0.00 0.00 0.00 3.79
1597 4043 6.413892 TCCATATCAATTTCTACACACAGCA 58.586 36.000 0.00 0.00 0.00 4.41
1598 4044 6.925610 TCCATATCAATTTCTACACACAGC 57.074 37.500 0.00 0.00 0.00 4.40
1599 4045 9.941664 GAAATCCATATCAATTTCTACACACAG 57.058 33.333 10.23 0.00 38.35 3.66
1600 4046 9.460019 TGAAATCCATATCAATTTCTACACACA 57.540 29.630 15.38 0.00 40.77 3.72
1612 4058 9.636789 AGTTTCTCATGATGAAATCCATATCAA 57.363 29.630 17.55 0.00 44.73 2.57
1614 4060 9.281371 TCAGTTTCTCATGATGAAATCCATATC 57.719 33.333 17.55 7.99 44.73 1.63
1662 4115 1.560505 AAATTTTCTGCTCCCGCCAT 58.439 45.000 0.00 0.00 34.43 4.40
1674 4127 5.469760 AGCCACAAAATGCAGGTAAATTTTC 59.530 36.000 0.00 0.00 34.55 2.29
1680 4133 2.295909 GACAGCCACAAAATGCAGGTAA 59.704 45.455 0.00 0.00 0.00 2.85
1681 4134 1.885887 GACAGCCACAAAATGCAGGTA 59.114 47.619 0.00 0.00 0.00 3.08
1682 4135 0.675633 GACAGCCACAAAATGCAGGT 59.324 50.000 0.00 0.00 0.00 4.00
1683 4136 0.675083 TGACAGCCACAAAATGCAGG 59.325 50.000 0.00 0.00 0.00 4.85
1684 4137 1.610038 TCTGACAGCCACAAAATGCAG 59.390 47.619 0.00 0.00 0.00 4.41
1691 4148 4.650734 TCAAATATGTCTGACAGCCACAA 58.349 39.130 16.46 0.00 0.00 3.33
1729 4193 2.687700 AGATGTAAGCTGAGTGCCAG 57.312 50.000 0.00 0.00 45.67 4.85
1778 4244 1.546029 ACTATCGCAGTCTCAGTTGCA 59.454 47.619 5.08 0.00 40.28 4.08
1779 4245 1.923204 CACTATCGCAGTCTCAGTTGC 59.077 52.381 0.00 0.00 34.26 4.17
1780 4246 2.919859 CACACTATCGCAGTCTCAGTTG 59.080 50.000 0.00 0.00 34.26 3.16
1781 4247 2.672478 GCACACTATCGCAGTCTCAGTT 60.672 50.000 0.00 0.00 34.26 3.16
1782 4248 1.135257 GCACACTATCGCAGTCTCAGT 60.135 52.381 0.00 0.00 34.26 3.41
1783 4249 1.133982 AGCACACTATCGCAGTCTCAG 59.866 52.381 0.00 0.00 34.26 3.35
1784 4250 1.133216 GAGCACACTATCGCAGTCTCA 59.867 52.381 0.00 0.00 34.26 3.27
1785 4251 1.133216 TGAGCACACTATCGCAGTCTC 59.867 52.381 0.00 0.00 34.26 3.36
1786 4252 1.177401 TGAGCACACTATCGCAGTCT 58.823 50.000 0.00 0.00 34.26 3.24
1787 4253 1.857217 CATGAGCACACTATCGCAGTC 59.143 52.381 0.00 0.00 34.26 3.51
1788 4254 1.205655 ACATGAGCACACTATCGCAGT 59.794 47.619 0.00 0.00 38.32 4.40
1789 4255 1.591619 CACATGAGCACACTATCGCAG 59.408 52.381 0.00 0.00 0.00 5.18
1790 4256 1.643880 CACATGAGCACACTATCGCA 58.356 50.000 0.00 0.00 0.00 5.10
1791 4257 0.302890 GCACATGAGCACACTATCGC 59.697 55.000 10.48 0.00 0.00 4.58
1792 4258 0.573987 CGCACATGAGCACACTATCG 59.426 55.000 15.56 0.00 0.00 2.92
1793 4259 1.325640 CACGCACATGAGCACACTATC 59.674 52.381 15.56 0.00 0.00 2.08
1794 4260 1.338105 ACACGCACATGAGCACACTAT 60.338 47.619 15.56 0.00 0.00 2.12
1795 4261 0.033366 ACACGCACATGAGCACACTA 59.967 50.000 15.56 0.00 0.00 2.74
1796 4262 0.033366 TACACGCACATGAGCACACT 59.967 50.000 15.56 0.00 0.00 3.55
1797 4263 0.865111 TTACACGCACATGAGCACAC 59.135 50.000 15.56 0.00 0.00 3.82
1798 4264 1.262950 GTTTACACGCACATGAGCACA 59.737 47.619 15.56 0.00 0.00 4.57
1799 4265 1.262950 TGTTTACACGCACATGAGCAC 59.737 47.619 15.56 5.15 0.00 4.40
1835 4321 9.092876 GACATTTTGTGTTTTAAGTTCATTCCA 57.907 29.630 0.00 0.00 42.36 3.53
1836 4322 8.547894 GGACATTTTGTGTTTTAAGTTCATTCC 58.452 33.333 0.00 0.00 42.36 3.01
1861 4347 4.184629 GTGCTCTCTTACCAAGTGTATGG 58.815 47.826 0.00 0.00 46.38 2.74
1888 4381 2.409948 ATAGAAACCTGCACTCCTGC 57.590 50.000 0.00 0.00 44.52 4.85
1889 4382 6.183360 ACAGTATATAGAAACCTGCACTCCTG 60.183 42.308 0.00 0.00 0.00 3.86
1890 4383 5.900123 ACAGTATATAGAAACCTGCACTCCT 59.100 40.000 0.00 0.00 0.00 3.69
1891 4384 6.163135 ACAGTATATAGAAACCTGCACTCC 57.837 41.667 0.00 0.00 0.00 3.85
1892 4385 6.702282 GGAACAGTATATAGAAACCTGCACTC 59.298 42.308 0.00 0.00 0.00 3.51
1893 4386 6.156256 TGGAACAGTATATAGAAACCTGCACT 59.844 38.462 0.00 0.00 0.00 4.40
1894 4387 6.346096 TGGAACAGTATATAGAAACCTGCAC 58.654 40.000 0.00 0.00 0.00 4.57
1949 4442 1.305219 TTCGGCTTTGGGAAGATGCG 61.305 55.000 0.00 0.00 34.71 4.73
1965 4458 4.375105 GCTGTAGTTCAAAGAAGACGTTCG 60.375 45.833 0.00 0.00 37.79 3.95
1966 4459 4.084485 GGCTGTAGTTCAAAGAAGACGTTC 60.084 45.833 0.00 0.00 0.00 3.95
1970 4463 4.214332 CCTTGGCTGTAGTTCAAAGAAGAC 59.786 45.833 0.00 0.00 0.00 3.01
1971 4464 4.389374 CCTTGGCTGTAGTTCAAAGAAGA 58.611 43.478 0.00 0.00 0.00 2.87
1972 4465 3.057946 GCCTTGGCTGTAGTTCAAAGAAG 60.058 47.826 4.11 0.00 0.00 2.85
1973 4466 2.884639 GCCTTGGCTGTAGTTCAAAGAA 59.115 45.455 4.11 0.00 0.00 2.52
1974 4467 2.158682 TGCCTTGGCTGTAGTTCAAAGA 60.159 45.455 13.18 0.00 0.00 2.52
1975 4468 2.229792 TGCCTTGGCTGTAGTTCAAAG 58.770 47.619 13.18 0.00 0.00 2.77
1979 4472 2.819608 TCATTTGCCTTGGCTGTAGTTC 59.180 45.455 13.18 0.00 0.00 3.01
1985 4478 3.928375 GTGTTAATCATTTGCCTTGGCTG 59.072 43.478 13.18 3.26 0.00 4.85
2012 4505 7.922811 ACCAGCTTCAAATTTTCTTTTCTACAG 59.077 33.333 0.00 0.00 0.00 2.74
2032 4675 6.991531 TGAAAATTGCTCAAAATAAACCAGCT 59.008 30.769 0.00 0.00 0.00 4.24
2041 4684 6.815089 TGTACCACTGAAAATTGCTCAAAAT 58.185 32.000 0.00 0.00 0.00 1.82
2047 4690 6.714810 TGAAGTATGTACCACTGAAAATTGCT 59.285 34.615 0.00 0.00 0.00 3.91
2048 4691 6.908825 TGAAGTATGTACCACTGAAAATTGC 58.091 36.000 0.00 0.00 0.00 3.56
2049 4692 7.174946 ACCTGAAGTATGTACCACTGAAAATTG 59.825 37.037 0.00 0.00 0.00 2.32
2050 4693 7.231467 ACCTGAAGTATGTACCACTGAAAATT 58.769 34.615 0.00 0.00 0.00 1.82
2056 4699 5.916661 ACTACCTGAAGTATGTACCACTG 57.083 43.478 0.00 0.00 0.00 3.66
2057 4700 5.187186 CCAACTACCTGAAGTATGTACCACT 59.813 44.000 0.00 0.00 0.00 4.00
2058 4701 5.186409 TCCAACTACCTGAAGTATGTACCAC 59.814 44.000 0.00 0.00 0.00 4.16
2059 4702 5.335261 TCCAACTACCTGAAGTATGTACCA 58.665 41.667 0.00 0.00 0.00 3.25
2060 4703 5.655532 TCTCCAACTACCTGAAGTATGTACC 59.344 44.000 0.00 0.00 0.00 3.34
2068 4711 4.873746 TGTCTTCTCCAACTACCTGAAG 57.126 45.455 0.00 0.00 36.44 3.02
2076 4719 5.782925 AGGGAGTATATGTCTTCTCCAACT 58.217 41.667 11.34 0.00 45.65 3.16
2094 4737 4.284490 TCATCTATTTTGGATCGGAGGGAG 59.716 45.833 0.00 0.00 0.00 4.30
2095 4738 4.040461 GTCATCTATTTTGGATCGGAGGGA 59.960 45.833 0.00 0.00 0.00 4.20
2096 4739 4.319177 GTCATCTATTTTGGATCGGAGGG 58.681 47.826 0.00 0.00 0.00 4.30
2097 4740 4.319177 GGTCATCTATTTTGGATCGGAGG 58.681 47.826 0.00 0.00 0.00 4.30
2098 4741 4.202357 TGGGTCATCTATTTTGGATCGGAG 60.202 45.833 0.00 0.00 0.00 4.63
2099 4742 3.714280 TGGGTCATCTATTTTGGATCGGA 59.286 43.478 0.00 0.00 0.00 4.55
2100 4743 4.085357 TGGGTCATCTATTTTGGATCGG 57.915 45.455 0.00 0.00 0.00 4.18
2101 4744 5.126067 AGTTGGGTCATCTATTTTGGATCG 58.874 41.667 0.00 0.00 0.00 3.69
2102 4745 7.093771 ACAAAGTTGGGTCATCTATTTTGGATC 60.094 37.037 0.00 0.00 0.00 3.36
2103 4746 6.725834 ACAAAGTTGGGTCATCTATTTTGGAT 59.274 34.615 0.00 0.00 0.00 3.41
2104 4747 6.074648 ACAAAGTTGGGTCATCTATTTTGGA 58.925 36.000 0.00 0.00 0.00 3.53
2105 4748 6.345096 ACAAAGTTGGGTCATCTATTTTGG 57.655 37.500 0.00 0.00 0.00 3.28
2106 4749 8.110860 AGTACAAAGTTGGGTCATCTATTTTG 57.889 34.615 0.00 0.00 0.00 2.44
2107 4750 9.802039 TTAGTACAAAGTTGGGTCATCTATTTT 57.198 29.630 0.00 0.00 0.00 1.82
2108 4751 9.227777 GTTAGTACAAAGTTGGGTCATCTATTT 57.772 33.333 0.00 0.00 0.00 1.40
2109 4752 8.603304 AGTTAGTACAAAGTTGGGTCATCTATT 58.397 33.333 0.00 0.00 0.00 1.73
2110 4753 8.147244 AGTTAGTACAAAGTTGGGTCATCTAT 57.853 34.615 0.00 0.00 0.00 1.98
2111 4754 7.549147 AGTTAGTACAAAGTTGGGTCATCTA 57.451 36.000 0.00 0.00 0.00 1.98
2112 4755 6.435292 AGTTAGTACAAAGTTGGGTCATCT 57.565 37.500 0.00 0.00 0.00 2.90
2113 4756 7.012989 ACAAAGTTAGTACAAAGTTGGGTCATC 59.987 37.037 0.00 0.00 0.00 2.92
2114 4757 6.831868 ACAAAGTTAGTACAAAGTTGGGTCAT 59.168 34.615 0.00 0.00 0.00 3.06
2115 4758 6.181908 ACAAAGTTAGTACAAAGTTGGGTCA 58.818 36.000 0.00 0.00 0.00 4.02
2116 4759 6.688637 ACAAAGTTAGTACAAAGTTGGGTC 57.311 37.500 0.00 0.00 0.00 4.46
2117 4760 7.341030 AGTACAAAGTTAGTACAAAGTTGGGT 58.659 34.615 6.30 0.00 43.24 4.51
2118 4761 7.797038 AGTACAAAGTTAGTACAAAGTTGGG 57.203 36.000 6.30 0.00 43.24 4.12
2139 4782 8.703743 TGACCCAACTTTGTACTAACTTTAGTA 58.296 33.333 4.98 4.98 43.36 1.82
2140 4783 7.567458 TGACCCAACTTTGTACTAACTTTAGT 58.433 34.615 6.85 6.85 45.39 2.24
2141 4784 8.617290 ATGACCCAACTTTGTACTAACTTTAG 57.383 34.615 0.00 0.00 36.82 1.85
2142 4785 8.434392 AGATGACCCAACTTTGTACTAACTTTA 58.566 33.333 0.00 0.00 0.00 1.85
2143 4786 7.287810 AGATGACCCAACTTTGTACTAACTTT 58.712 34.615 0.00 0.00 0.00 2.66
2144 4787 6.838382 AGATGACCCAACTTTGTACTAACTT 58.162 36.000 0.00 0.00 0.00 2.66
2145 4788 6.435292 AGATGACCCAACTTTGTACTAACT 57.565 37.500 0.00 0.00 0.00 2.24
2146 4789 8.788325 AATAGATGACCCAACTTTGTACTAAC 57.212 34.615 0.00 0.00 0.00 2.34
2149 4792 8.047310 CCTAAATAGATGACCCAACTTTGTACT 58.953 37.037 0.00 0.00 0.00 2.73
2150 4793 8.044908 TCCTAAATAGATGACCCAACTTTGTAC 58.955 37.037 0.00 0.00 0.00 2.90
2151 4794 8.153221 TCCTAAATAGATGACCCAACTTTGTA 57.847 34.615 0.00 0.00 0.00 2.41
2152 4795 7.027874 TCCTAAATAGATGACCCAACTTTGT 57.972 36.000 0.00 0.00 0.00 2.83
2153 4796 7.414098 CGTTCCTAAATAGATGACCCAACTTTG 60.414 40.741 0.00 0.00 0.00 2.77
2154 4797 6.598064 CGTTCCTAAATAGATGACCCAACTTT 59.402 38.462 0.00 0.00 0.00 2.66
2155 4798 6.113411 CGTTCCTAAATAGATGACCCAACTT 58.887 40.000 0.00 0.00 0.00 2.66
2156 4799 5.396436 CCGTTCCTAAATAGATGACCCAACT 60.396 44.000 0.00 0.00 0.00 3.16
2157 4800 4.814771 CCGTTCCTAAATAGATGACCCAAC 59.185 45.833 0.00 0.00 0.00 3.77
2158 4801 4.717778 TCCGTTCCTAAATAGATGACCCAA 59.282 41.667 0.00 0.00 0.00 4.12
2159 4802 4.291792 TCCGTTCCTAAATAGATGACCCA 58.708 43.478 0.00 0.00 0.00 4.51
2160 4803 4.262506 CCTCCGTTCCTAAATAGATGACCC 60.263 50.000 0.00 0.00 0.00 4.46
2161 4804 4.799917 GCCTCCGTTCCTAAATAGATGACC 60.800 50.000 0.00 0.00 0.00 4.02
2162 4805 4.202223 TGCCTCCGTTCCTAAATAGATGAC 60.202 45.833 0.00 0.00 0.00 3.06
2163 4806 3.964688 TGCCTCCGTTCCTAAATAGATGA 59.035 43.478 0.00 0.00 0.00 2.92
2164 4807 4.202264 ACTGCCTCCGTTCCTAAATAGATG 60.202 45.833 0.00 0.00 0.00 2.90
2165 4808 3.967987 ACTGCCTCCGTTCCTAAATAGAT 59.032 43.478 0.00 0.00 0.00 1.98
2166 4809 3.371965 ACTGCCTCCGTTCCTAAATAGA 58.628 45.455 0.00 0.00 0.00 1.98
2167 4810 3.821421 ACTGCCTCCGTTCCTAAATAG 57.179 47.619 0.00 0.00 0.00 1.73
2168 4811 5.364446 TCATTACTGCCTCCGTTCCTAAATA 59.636 40.000 0.00 0.00 0.00 1.40
2169 4812 4.163458 TCATTACTGCCTCCGTTCCTAAAT 59.837 41.667 0.00 0.00 0.00 1.40
2170 4813 3.516300 TCATTACTGCCTCCGTTCCTAAA 59.484 43.478 0.00 0.00 0.00 1.85
2171 4814 3.101437 TCATTACTGCCTCCGTTCCTAA 58.899 45.455 0.00 0.00 0.00 2.69
2172 4815 2.429610 GTCATTACTGCCTCCGTTCCTA 59.570 50.000 0.00 0.00 0.00 2.94
2173 4816 1.207329 GTCATTACTGCCTCCGTTCCT 59.793 52.381 0.00 0.00 0.00 3.36
2174 4817 1.653151 GTCATTACTGCCTCCGTTCC 58.347 55.000 0.00 0.00 0.00 3.62
2175 4818 1.066430 TGGTCATTACTGCCTCCGTTC 60.066 52.381 0.00 0.00 0.00 3.95
2176 4819 0.981183 TGGTCATTACTGCCTCCGTT 59.019 50.000 0.00 0.00 0.00 4.44
2177 4820 0.981183 TTGGTCATTACTGCCTCCGT 59.019 50.000 0.00 0.00 0.00 4.69
2178 4821 1.369625 GTTGGTCATTACTGCCTCCG 58.630 55.000 0.00 0.00 0.00 4.63
2179 4822 1.066430 TCGTTGGTCATTACTGCCTCC 60.066 52.381 0.00 0.00 0.00 4.30
2180 4823 2.380084 TCGTTGGTCATTACTGCCTC 57.620 50.000 0.00 0.00 0.00 4.70
2181 4824 2.851263 TTCGTTGGTCATTACTGCCT 57.149 45.000 0.00 0.00 0.00 4.75
2182 4825 3.907894 TTTTCGTTGGTCATTACTGCC 57.092 42.857 0.00 0.00 0.00 4.85
2183 4826 5.689961 ACAAATTTTCGTTGGTCATTACTGC 59.310 36.000 0.00 0.00 0.00 4.40
2184 4827 7.692908 AACAAATTTTCGTTGGTCATTACTG 57.307 32.000 0.00 0.00 0.00 2.74
2185 4828 8.599774 CAAAACAAATTTTCGTTGGTCATTACT 58.400 29.630 0.00 0.00 35.79 2.24
2186 4829 8.384365 ACAAAACAAATTTTCGTTGGTCATTAC 58.616 29.630 8.54 0.00 35.79 1.89
2187 4830 8.383619 CACAAAACAAATTTTCGTTGGTCATTA 58.616 29.630 8.54 0.00 35.79 1.90
2188 4831 7.118390 TCACAAAACAAATTTTCGTTGGTCATT 59.882 29.630 8.54 0.00 35.79 2.57
2194 4837 8.565583 CACAATTCACAAAACAAATTTTCGTTG 58.434 29.630 0.00 0.00 35.79 4.10
2197 4840 8.652592 AACACAATTCACAAAACAAATTTTCG 57.347 26.923 0.00 0.00 35.79 3.46
2203 4846 7.155328 ACCAGTAACACAATTCACAAAACAAA 58.845 30.769 0.00 0.00 0.00 2.83
2204 4847 6.692486 ACCAGTAACACAATTCACAAAACAA 58.308 32.000 0.00 0.00 0.00 2.83
2205 4848 6.274157 ACCAGTAACACAATTCACAAAACA 57.726 33.333 0.00 0.00 0.00 2.83
2206 4849 6.035542 CCAACCAGTAACACAATTCACAAAAC 59.964 38.462 0.00 0.00 0.00 2.43
2207 4850 6.071334 TCCAACCAGTAACACAATTCACAAAA 60.071 34.615 0.00 0.00 0.00 2.44
2208 4851 5.419155 TCCAACCAGTAACACAATTCACAAA 59.581 36.000 0.00 0.00 0.00 2.83
2209 4852 4.950475 TCCAACCAGTAACACAATTCACAA 59.050 37.500 0.00 0.00 0.00 3.33
2210 4853 4.527944 TCCAACCAGTAACACAATTCACA 58.472 39.130 0.00 0.00 0.00 3.58
2211 4854 5.705609 ATCCAACCAGTAACACAATTCAC 57.294 39.130 0.00 0.00 0.00 3.18
2212 4855 6.723298 AAATCCAACCAGTAACACAATTCA 57.277 33.333 0.00 0.00 0.00 2.57
2213 4856 6.983890 ACAAAATCCAACCAGTAACACAATTC 59.016 34.615 0.00 0.00 0.00 2.17
2214 4857 6.883744 ACAAAATCCAACCAGTAACACAATT 58.116 32.000 0.00 0.00 0.00 2.32
2215 4858 6.478512 ACAAAATCCAACCAGTAACACAAT 57.521 33.333 0.00 0.00 0.00 2.71
2216 4859 5.923733 ACAAAATCCAACCAGTAACACAA 57.076 34.783 0.00 0.00 0.00 3.33
2217 4860 6.358178 TCTACAAAATCCAACCAGTAACACA 58.642 36.000 0.00 0.00 0.00 3.72
2218 4861 6.870971 TCTACAAAATCCAACCAGTAACAC 57.129 37.500 0.00 0.00 0.00 3.32
2219 4862 6.017770 CGTTCTACAAAATCCAACCAGTAACA 60.018 38.462 0.00 0.00 0.00 2.41
2220 4863 6.203338 TCGTTCTACAAAATCCAACCAGTAAC 59.797 38.462 0.00 0.00 0.00 2.50
2221 4864 6.289834 TCGTTCTACAAAATCCAACCAGTAA 58.710 36.000 0.00 0.00 0.00 2.24
2222 4865 5.856156 TCGTTCTACAAAATCCAACCAGTA 58.144 37.500 0.00 0.00 0.00 2.74
2282 4926 9.956720 CATAGGGTAGAATTTTGATTGATTGTC 57.043 33.333 0.00 0.00 0.00 3.18
2298 4942 3.851458 TCGTGCTACTCATAGGGTAGA 57.149 47.619 8.19 0.00 38.99 2.59
2299 4943 3.630769 TGTTCGTGCTACTCATAGGGTAG 59.369 47.826 0.00 0.00 39.49 3.18
2303 4947 3.617263 GGTTTGTTCGTGCTACTCATAGG 59.383 47.826 0.00 0.00 0.00 2.57
2304 4948 4.242475 TGGTTTGTTCGTGCTACTCATAG 58.758 43.478 0.00 0.00 0.00 2.23
2306 4950 3.120321 TGGTTTGTTCGTGCTACTCAT 57.880 42.857 0.00 0.00 0.00 2.90
2309 4959 4.606961 CAAATTGGTTTGTTCGTGCTACT 58.393 39.130 0.00 0.00 39.85 2.57
2321 4971 7.710475 CACACTAATTGAGGAACAAATTGGTTT 59.290 33.333 0.00 0.00 42.03 3.27
2388 5069 5.598417 AGCAGATGGACACATACACATAGTA 59.402 40.000 0.00 0.00 37.47 1.82
2389 5070 4.406972 AGCAGATGGACACATACACATAGT 59.593 41.667 0.00 0.00 37.47 2.12
2390 5071 4.748600 CAGCAGATGGACACATACACATAG 59.251 45.833 0.00 0.00 37.47 2.23
2448 5136 5.189659 ACGAGCTAGCTAAATAGTGGAAG 57.810 43.478 19.38 0.42 0.00 3.46
2468 5157 6.346120 CGTGAGATGAGGCATAATTTTCTACG 60.346 42.308 0.00 0.00 0.00 3.51
2470 5159 6.582636 ACGTGAGATGAGGCATAATTTTCTA 58.417 36.000 0.00 0.00 0.00 2.10
2480 5169 3.885724 TTAATGACGTGAGATGAGGCA 57.114 42.857 0.00 0.00 0.00 4.75
2481 5170 7.426929 AATAATTAATGACGTGAGATGAGGC 57.573 36.000 0.00 0.00 0.00 4.70
2532 5221 1.227853 CTCCGGGGATAAAAGGCCG 60.228 63.158 0.00 0.00 0.00 6.13
2644 5346 3.214328 TGAACTTTGGCTGAAAGAGGAC 58.786 45.455 13.57 4.94 43.50 3.85
2720 5422 2.847327 ACAGATTGGTGAGTGTGAGG 57.153 50.000 0.00 0.00 0.00 3.86
2726 5428 3.254166 GCACAATGAACAGATTGGTGAGT 59.746 43.478 0.00 0.00 37.60 3.41
2865 5567 4.072131 GTTCTCAGGGATTTACAAGCACA 58.928 43.478 0.00 0.00 0.00 4.57
2901 5607 3.999001 ACAGCACAATGTCATCACTACAG 59.001 43.478 0.00 0.00 0.00 2.74
2919 5625 3.070018 AGAAATGTGCACTCACTACAGC 58.930 45.455 19.41 0.00 43.49 4.40
3096 5851 8.615705 AGATATAGTACCATCAGTCCATCACTA 58.384 37.037 0.00 0.00 32.21 2.74
3097 5852 7.474445 AGATATAGTACCATCAGTCCATCACT 58.526 38.462 0.00 0.00 34.67 3.41
3098 5853 7.710676 AGATATAGTACCATCAGTCCATCAC 57.289 40.000 0.00 0.00 0.00 3.06
3099 5854 8.615705 AGTAGATATAGTACCATCAGTCCATCA 58.384 37.037 0.00 0.00 0.00 3.07
3100 5855 9.116067 GAGTAGATATAGTACCATCAGTCCATC 57.884 40.741 0.00 0.00 0.00 3.51
3101 5856 8.841757 AGAGTAGATATAGTACCATCAGTCCAT 58.158 37.037 0.00 0.00 0.00 3.41
3102 5857 8.220898 AGAGTAGATATAGTACCATCAGTCCA 57.779 38.462 0.00 0.00 0.00 4.02
3103 5858 9.826574 CTAGAGTAGATATAGTACCATCAGTCC 57.173 40.741 0.00 0.00 0.00 3.85
3179 5937 6.072618 CCACTATCGTACTGTATTCCCACTAG 60.073 46.154 0.00 0.00 0.00 2.57
3180 5938 5.766670 CCACTATCGTACTGTATTCCCACTA 59.233 44.000 0.00 0.00 0.00 2.74
3181 5939 4.583489 CCACTATCGTACTGTATTCCCACT 59.417 45.833 0.00 0.00 0.00 4.00
3448 6574 4.479993 CTGCTCCCTTCGGCCAGG 62.480 72.222 2.24 2.05 0.00 4.45


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.