Multiple sequence alignment - TraesCS1B01G440100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G440100 chr1B 100.000 2871 0 0 1 2871 661632690 661629820 0.000000e+00 5302
1 TraesCS1B01G440100 chr1A 92.678 1038 31 11 933 1969 571578509 571577516 0.000000e+00 1454
2 TraesCS1B01G440100 chr1A 82.655 467 56 9 2400 2855 571577150 571576698 9.640000e-105 390
3 TraesCS1B01G440100 chr1A 85.149 404 30 14 1993 2385 571577523 571577139 1.250000e-103 387
4 TraesCS1B01G440100 chr1A 83.990 381 33 12 571 938 571578907 571578542 9.850000e-90 340
5 TraesCS1B01G440100 chr1A 79.755 489 64 20 1018 1496 571574504 571574041 3.570000e-84 322
6 TraesCS1B01G440100 chr1A 85.821 134 19 0 1694 1827 571577824 571577691 2.980000e-30 143
7 TraesCS1B01G440100 chr1D 90.996 1044 41 24 929 1969 475721225 475720232 0.000000e+00 1358
8 TraesCS1B01G440100 chr1D 89.409 406 27 8 534 938 475721651 475721261 5.520000e-137 497
9 TraesCS1B01G440100 chr1D 83.589 457 53 12 2409 2855 475719690 475719246 2.660000e-110 409
10 TraesCS1B01G440100 chr1D 87.071 379 23 10 1990 2358 475720242 475719880 3.440000e-109 405
11 TraesCS1B01G440100 chr1D 80.478 502 72 17 1006 1496 475707019 475706533 7.560000e-96 361
12 TraesCS1B01G440100 chr1D 84.298 121 17 2 1707 1827 475720592 475720474 1.810000e-22 117
13 TraesCS1B01G440100 chr3B 98.282 291 5 0 151 441 113928641 113928351 7.100000e-141 510
14 TraesCS1B01G440100 chr3B 96.633 297 9 1 153 449 805051828 805051533 2.570000e-135 492
15 TraesCS1B01G440100 chr3A 97.342 301 7 1 142 441 370232777 370233077 7.100000e-141 510
16 TraesCS1B01G440100 chr3A 97.260 292 8 0 150 441 719649694 719649985 1.990000e-136 496
17 TraesCS1B01G440100 chr3A 97.251 291 7 1 153 443 65362649 65362938 2.570000e-135 492
18 TraesCS1B01G440100 chr5A 97.945 292 6 0 151 442 546793775 546794066 9.180000e-140 507
19 TraesCS1B01G440100 chr4B 97.611 293 7 0 150 442 541899987 541899695 1.190000e-138 503
20 TraesCS1B01G440100 chr2A 98.258 287 5 0 153 439 685744497 685744211 1.190000e-138 503
21 TraesCS1B01G440100 chr2A 97.931 290 6 0 150 439 706550890 706551179 1.190000e-138 503


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G440100 chr1B 661629820 661632690 2870 True 5302.0 5302 100.0000 1 2871 1 chr1B.!!$R1 2870
1 TraesCS1B01G440100 chr1A 571574041 571578907 4866 True 506.0 1454 85.0080 571 2855 6 chr1A.!!$R1 2284
2 TraesCS1B01G440100 chr1D 475719246 475721651 2405 True 557.2 1358 87.0726 534 2855 5 chr1D.!!$R2 2321

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
295 296 0.038159 GCACGTGCTCCTAGACACTT 60.038 55.0 32.55 0.0 38.21 3.16 F
886 899 0.105964 TCAAGTGTGTCTTCCCCACG 59.894 55.0 0.00 0.0 35.56 4.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1236 1303 0.804156 GCGGCGAGGAGAAGAAGAAG 60.804 60.0 12.98 0.0 0.0 2.85 R
2454 2691 0.032416 GGGTAGGCAGGAGGTAGTGA 60.032 60.0 0.00 0.0 0.0 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.823790 TTCTTTTTAGAAGTTGCGGGAC 57.176 40.909 0.00 0.00 0.00 4.46
24 25 4.081322 TCTTTTTAGAAGTTGCGGGACT 57.919 40.909 0.00 0.00 0.00 3.85
25 26 4.062991 TCTTTTTAGAAGTTGCGGGACTC 58.937 43.478 0.00 0.00 0.00 3.36
26 27 2.467566 TTTAGAAGTTGCGGGACTCC 57.532 50.000 0.00 0.00 0.00 3.85
38 39 2.304751 GGGACTCCGATTCGCTAAAA 57.695 50.000 0.00 0.00 0.00 1.52
39 40 2.624636 GGGACTCCGATTCGCTAAAAA 58.375 47.619 0.00 0.00 0.00 1.94
40 41 2.608090 GGGACTCCGATTCGCTAAAAAG 59.392 50.000 0.00 0.00 0.00 2.27
41 42 2.608090 GGACTCCGATTCGCTAAAAAGG 59.392 50.000 0.00 0.00 0.00 3.11
42 43 3.259902 GACTCCGATTCGCTAAAAAGGT 58.740 45.455 0.00 0.00 0.00 3.50
43 44 4.427312 GACTCCGATTCGCTAAAAAGGTA 58.573 43.478 0.00 0.00 0.00 3.08
44 45 4.824289 ACTCCGATTCGCTAAAAAGGTAA 58.176 39.130 0.00 0.00 0.00 2.85
45 46 5.240121 ACTCCGATTCGCTAAAAAGGTAAA 58.760 37.500 0.00 0.00 0.00 2.01
46 47 5.702209 ACTCCGATTCGCTAAAAAGGTAAAA 59.298 36.000 0.00 0.00 0.00 1.52
47 48 6.128363 ACTCCGATTCGCTAAAAAGGTAAAAG 60.128 38.462 0.00 0.00 0.00 2.27
48 49 5.933463 TCCGATTCGCTAAAAAGGTAAAAGA 59.067 36.000 0.00 0.00 0.00 2.52
49 50 6.091713 TCCGATTCGCTAAAAAGGTAAAAGAG 59.908 38.462 0.00 0.00 0.00 2.85
50 51 6.091713 CCGATTCGCTAAAAAGGTAAAAGAGA 59.908 38.462 0.00 0.00 0.00 3.10
51 52 7.174082 CGATTCGCTAAAAAGGTAAAAGAGAG 58.826 38.462 0.00 0.00 0.00 3.20
52 53 7.148623 CGATTCGCTAAAAAGGTAAAAGAGAGT 60.149 37.037 0.00 0.00 0.00 3.24
53 54 7.417496 TTCGCTAAAAAGGTAAAAGAGAGTC 57.583 36.000 0.00 0.00 0.00 3.36
54 55 6.756221 TCGCTAAAAAGGTAAAAGAGAGTCT 58.244 36.000 0.00 0.00 0.00 3.24
55 56 7.889469 TCGCTAAAAAGGTAAAAGAGAGTCTA 58.111 34.615 0.00 0.00 0.00 2.59
56 57 8.362639 TCGCTAAAAAGGTAAAAGAGAGTCTAA 58.637 33.333 0.00 0.00 0.00 2.10
57 58 8.985805 CGCTAAAAAGGTAAAAGAGAGTCTAAA 58.014 33.333 0.00 0.00 0.00 1.85
64 65 9.767228 AAGGTAAAAGAGAGTCTAAAAAGAGAC 57.233 33.333 0.00 0.00 45.30 3.36
76 77 8.030744 GTCTAAAAAGAGACTTGGATAACCAC 57.969 38.462 0.00 0.00 42.26 4.16
77 78 5.941948 AAAAAGAGACTTGGATAACCACG 57.058 39.130 0.00 0.00 46.80 4.94
78 79 4.884668 AAAGAGACTTGGATAACCACGA 57.115 40.909 2.31 0.00 46.80 4.35
79 80 4.457834 AAGAGACTTGGATAACCACGAG 57.542 45.455 2.31 0.00 46.80 4.18
80 81 2.761208 AGAGACTTGGATAACCACGAGG 59.239 50.000 2.31 0.00 46.80 4.63
81 82 1.207329 AGACTTGGATAACCACGAGGC 59.793 52.381 2.31 0.00 46.80 4.70
82 83 0.252197 ACTTGGATAACCACGAGGCC 59.748 55.000 2.31 0.00 46.80 5.19
83 84 0.463833 CTTGGATAACCACGAGGCCC 60.464 60.000 0.00 0.00 46.80 5.80
84 85 2.108362 GGATAACCACGAGGCCCG 59.892 66.667 11.48 11.48 45.44 6.13
85 86 2.588034 GATAACCACGAGGCCCGC 60.588 66.667 12.78 0.00 43.32 6.13
86 87 3.379865 GATAACCACGAGGCCCGCA 62.380 63.158 12.78 0.00 43.32 5.69
87 88 3.675619 ATAACCACGAGGCCCGCAC 62.676 63.158 12.78 0.00 43.32 5.34
98 99 4.508128 CCCGCACACGACGCCTAT 62.508 66.667 0.00 0.00 43.93 2.57
99 100 3.254654 CCGCACACGACGCCTATG 61.255 66.667 0.00 0.00 43.93 2.23
100 101 2.202557 CGCACACGACGCCTATGA 60.203 61.111 0.00 0.00 43.93 2.15
101 102 2.224217 CGCACACGACGCCTATGAG 61.224 63.158 0.00 0.00 43.93 2.90
102 103 1.138883 GCACACGACGCCTATGAGA 59.861 57.895 0.00 0.00 0.00 3.27
103 104 0.867753 GCACACGACGCCTATGAGAG 60.868 60.000 0.00 0.00 0.00 3.20
105 106 1.360551 CACGACGCCTATGAGAGGG 59.639 63.158 0.00 0.00 46.81 4.30
106 107 2.336809 CGACGCCTATGAGAGGGC 59.663 66.667 0.00 0.00 46.81 5.19
110 111 3.631046 GCCTATGAGAGGGCGGGG 61.631 72.222 0.00 0.00 46.81 5.73
111 112 2.925170 CCTATGAGAGGGCGGGGG 60.925 72.222 0.00 0.00 42.39 5.40
112 113 2.122813 CTATGAGAGGGCGGGGGT 60.123 66.667 0.00 0.00 0.00 4.95
113 114 1.766461 CTATGAGAGGGCGGGGGTT 60.766 63.158 0.00 0.00 0.00 4.11
114 115 2.044806 CTATGAGAGGGCGGGGGTTG 62.045 65.000 0.00 0.00 0.00 3.77
122 123 2.044352 GCGGGGGTTGCCTACAAT 60.044 61.111 0.00 0.00 38.27 2.71
123 124 2.414785 GCGGGGGTTGCCTACAATG 61.415 63.158 0.00 0.00 38.27 2.82
124 125 1.001393 CGGGGGTTGCCTACAATGT 60.001 57.895 0.00 0.00 38.27 2.71
125 126 1.029947 CGGGGGTTGCCTACAATGTC 61.030 60.000 0.00 0.00 38.27 3.06
126 127 0.039035 GGGGGTTGCCTACAATGTCA 59.961 55.000 0.00 0.00 38.27 3.58
127 128 1.341976 GGGGGTTGCCTACAATGTCAT 60.342 52.381 0.00 0.00 38.27 3.06
128 129 2.024414 GGGGTTGCCTACAATGTCATC 58.976 52.381 0.00 0.00 38.27 2.92
129 130 2.620367 GGGGTTGCCTACAATGTCATCA 60.620 50.000 0.00 0.00 38.27 3.07
130 131 2.423538 GGGTTGCCTACAATGTCATCAC 59.576 50.000 0.00 0.00 38.27 3.06
131 132 3.347216 GGTTGCCTACAATGTCATCACT 58.653 45.455 0.00 0.00 38.27 3.41
132 133 3.758554 GGTTGCCTACAATGTCATCACTT 59.241 43.478 0.00 0.00 38.27 3.16
133 134 4.218417 GGTTGCCTACAATGTCATCACTTT 59.782 41.667 0.00 0.00 38.27 2.66
134 135 5.278957 GGTTGCCTACAATGTCATCACTTTT 60.279 40.000 0.00 0.00 38.27 2.27
135 136 5.375417 TGCCTACAATGTCATCACTTTTG 57.625 39.130 0.00 0.00 0.00 2.44
136 137 4.168760 GCCTACAATGTCATCACTTTTGC 58.831 43.478 0.00 0.00 0.00 3.68
137 138 4.082571 GCCTACAATGTCATCACTTTTGCT 60.083 41.667 0.00 0.00 0.00 3.91
138 139 5.634896 CCTACAATGTCATCACTTTTGCTC 58.365 41.667 0.00 0.00 0.00 4.26
139 140 5.181811 CCTACAATGTCATCACTTTTGCTCA 59.818 40.000 0.00 0.00 0.00 4.26
140 141 5.117355 ACAATGTCATCACTTTTGCTCAG 57.883 39.130 0.00 0.00 0.00 3.35
141 142 4.022589 ACAATGTCATCACTTTTGCTCAGG 60.023 41.667 0.00 0.00 0.00 3.86
142 143 1.881973 TGTCATCACTTTTGCTCAGGC 59.118 47.619 0.00 0.00 39.26 4.85
151 152 2.427320 TGCTCAGGCAAGCGACTT 59.573 55.556 7.30 0.00 46.36 3.01
152 153 1.671166 TGCTCAGGCAAGCGACTTA 59.329 52.632 7.30 0.00 46.36 2.24
153 154 0.390340 TGCTCAGGCAAGCGACTTAG 60.390 55.000 7.30 0.00 46.36 2.18
154 155 0.108615 GCTCAGGCAAGCGACTTAGA 60.109 55.000 0.00 0.00 38.54 2.10
155 156 1.919918 CTCAGGCAAGCGACTTAGAG 58.080 55.000 0.00 0.00 0.00 2.43
156 157 0.108615 TCAGGCAAGCGACTTAGAGC 60.109 55.000 0.00 0.00 0.00 4.09
157 158 1.086634 CAGGCAAGCGACTTAGAGCC 61.087 60.000 9.75 9.75 42.31 4.70
158 159 1.079127 GGCAAGCGACTTAGAGCCA 60.079 57.895 11.73 0.00 41.63 4.75
159 160 1.086634 GGCAAGCGACTTAGAGCCAG 61.087 60.000 11.73 0.00 41.63 4.85
160 161 0.390472 GCAAGCGACTTAGAGCCAGT 60.390 55.000 0.00 0.00 0.00 4.00
161 162 1.135083 GCAAGCGACTTAGAGCCAGTA 60.135 52.381 0.00 0.00 0.00 2.74
162 163 2.531206 CAAGCGACTTAGAGCCAGTAC 58.469 52.381 0.00 0.00 0.00 2.73
163 164 1.835494 AGCGACTTAGAGCCAGTACA 58.165 50.000 0.00 0.00 0.00 2.90
164 165 2.168496 AGCGACTTAGAGCCAGTACAA 58.832 47.619 0.00 0.00 0.00 2.41
165 166 2.761208 AGCGACTTAGAGCCAGTACAAT 59.239 45.455 0.00 0.00 0.00 2.71
166 167 3.952323 AGCGACTTAGAGCCAGTACAATA 59.048 43.478 0.00 0.00 0.00 1.90
167 168 4.036971 AGCGACTTAGAGCCAGTACAATAG 59.963 45.833 0.00 0.00 0.00 1.73
168 169 4.036498 GCGACTTAGAGCCAGTACAATAGA 59.964 45.833 0.00 0.00 0.00 1.98
169 170 5.753744 CGACTTAGAGCCAGTACAATAGAG 58.246 45.833 0.00 0.00 0.00 2.43
170 171 5.523438 ACTTAGAGCCAGTACAATAGAGC 57.477 43.478 0.00 0.00 0.00 4.09
171 172 5.205056 ACTTAGAGCCAGTACAATAGAGCT 58.795 41.667 0.00 0.00 0.00 4.09
172 173 5.068460 ACTTAGAGCCAGTACAATAGAGCTG 59.932 44.000 0.00 0.00 0.00 4.24
173 174 3.636679 AGAGCCAGTACAATAGAGCTGA 58.363 45.455 0.00 0.00 0.00 4.26
174 175 3.636300 AGAGCCAGTACAATAGAGCTGAG 59.364 47.826 0.00 0.00 0.00 3.35
175 176 3.370104 AGCCAGTACAATAGAGCTGAGT 58.630 45.455 0.00 0.00 0.00 3.41
176 177 3.383185 AGCCAGTACAATAGAGCTGAGTC 59.617 47.826 0.00 0.00 0.00 3.36
177 178 3.131223 GCCAGTACAATAGAGCTGAGTCA 59.869 47.826 0.00 0.00 0.00 3.41
178 179 4.736168 GCCAGTACAATAGAGCTGAGTCAG 60.736 50.000 16.21 16.21 34.12 3.51
191 192 4.662468 CTGAGTCAGCTGGCTATAAGAA 57.338 45.455 23.29 2.05 0.00 2.52
192 193 5.016051 CTGAGTCAGCTGGCTATAAGAAA 57.984 43.478 23.29 0.23 0.00 2.52
193 194 5.609423 CTGAGTCAGCTGGCTATAAGAAAT 58.391 41.667 23.29 0.00 0.00 2.17
194 195 6.731292 TGAGTCAGCTGGCTATAAGAAATA 57.269 37.500 23.29 0.00 0.00 1.40
195 196 7.124573 TGAGTCAGCTGGCTATAAGAAATAA 57.875 36.000 23.29 0.00 0.00 1.40
196 197 7.564793 TGAGTCAGCTGGCTATAAGAAATAAA 58.435 34.615 23.29 0.00 0.00 1.40
197 198 7.495934 TGAGTCAGCTGGCTATAAGAAATAAAC 59.504 37.037 23.29 4.23 0.00 2.01
198 199 7.569240 AGTCAGCTGGCTATAAGAAATAAACT 58.431 34.615 21.80 3.19 0.00 2.66
199 200 8.705594 AGTCAGCTGGCTATAAGAAATAAACTA 58.294 33.333 21.80 0.00 0.00 2.24
200 201 8.983724 GTCAGCTGGCTATAAGAAATAAACTAG 58.016 37.037 12.09 0.00 0.00 2.57
201 202 8.705594 TCAGCTGGCTATAAGAAATAAACTAGT 58.294 33.333 15.13 0.00 0.00 2.57
202 203 9.982651 CAGCTGGCTATAAGAAATAAACTAGTA 57.017 33.333 5.57 0.00 0.00 1.82
222 223 8.643324 ACTAGTATATTCTTGCTTAGTTGGAGG 58.357 37.037 0.00 0.00 0.00 4.30
223 224 7.676683 AGTATATTCTTGCTTAGTTGGAGGA 57.323 36.000 0.00 0.00 0.00 3.71
224 225 8.090788 AGTATATTCTTGCTTAGTTGGAGGAA 57.909 34.615 0.00 0.00 0.00 3.36
225 226 8.548877 AGTATATTCTTGCTTAGTTGGAGGAAA 58.451 33.333 0.00 0.00 28.75 3.13
226 227 7.872113 ATATTCTTGCTTAGTTGGAGGAAAG 57.128 36.000 0.00 0.00 28.75 2.62
227 228 4.974645 TCTTGCTTAGTTGGAGGAAAGA 57.025 40.909 0.00 0.00 0.00 2.52
228 229 4.899502 TCTTGCTTAGTTGGAGGAAAGAG 58.100 43.478 0.00 0.00 0.00 2.85
229 230 4.593206 TCTTGCTTAGTTGGAGGAAAGAGA 59.407 41.667 0.00 0.00 0.00 3.10
230 231 4.974645 TGCTTAGTTGGAGGAAAGAGAA 57.025 40.909 0.00 0.00 0.00 2.87
231 232 4.899502 TGCTTAGTTGGAGGAAAGAGAAG 58.100 43.478 0.00 0.00 0.00 2.85
232 233 4.593206 TGCTTAGTTGGAGGAAAGAGAAGA 59.407 41.667 0.00 0.00 0.00 2.87
233 234 5.071788 TGCTTAGTTGGAGGAAAGAGAAGAA 59.928 40.000 0.00 0.00 0.00 2.52
234 235 5.641636 GCTTAGTTGGAGGAAAGAGAAGAAG 59.358 44.000 0.00 0.00 0.00 2.85
235 236 6.519213 GCTTAGTTGGAGGAAAGAGAAGAAGA 60.519 42.308 0.00 0.00 0.00 2.87
236 237 5.482163 AGTTGGAGGAAAGAGAAGAAGAG 57.518 43.478 0.00 0.00 0.00 2.85
237 238 5.151454 AGTTGGAGGAAAGAGAAGAAGAGA 58.849 41.667 0.00 0.00 0.00 3.10
238 239 5.245977 AGTTGGAGGAAAGAGAAGAAGAGAG 59.754 44.000 0.00 0.00 0.00 3.20
239 240 5.004361 TGGAGGAAAGAGAAGAAGAGAGA 57.996 43.478 0.00 0.00 0.00 3.10
240 241 5.016173 TGGAGGAAAGAGAAGAAGAGAGAG 58.984 45.833 0.00 0.00 0.00 3.20
241 242 5.222233 TGGAGGAAAGAGAAGAAGAGAGAGA 60.222 44.000 0.00 0.00 0.00 3.10
242 243 5.714806 GGAGGAAAGAGAAGAAGAGAGAGAA 59.285 44.000 0.00 0.00 0.00 2.87
243 244 6.127619 GGAGGAAAGAGAAGAAGAGAGAGAAG 60.128 46.154 0.00 0.00 0.00 2.85
244 245 5.716703 AGGAAAGAGAAGAAGAGAGAGAAGG 59.283 44.000 0.00 0.00 0.00 3.46
245 246 5.105351 GGAAAGAGAAGAAGAGAGAGAAGGG 60.105 48.000 0.00 0.00 0.00 3.95
246 247 4.946160 AGAGAAGAAGAGAGAGAAGGGA 57.054 45.455 0.00 0.00 0.00 4.20
247 248 5.269554 AGAGAAGAAGAGAGAGAAGGGAA 57.730 43.478 0.00 0.00 0.00 3.97
248 249 5.264395 AGAGAAGAAGAGAGAGAAGGGAAG 58.736 45.833 0.00 0.00 0.00 3.46
249 250 3.769300 AGAAGAAGAGAGAGAAGGGAAGC 59.231 47.826 0.00 0.00 0.00 3.86
250 251 2.099405 AGAAGAGAGAGAAGGGAAGCG 58.901 52.381 0.00 0.00 0.00 4.68
251 252 1.136110 GAAGAGAGAGAAGGGAAGCGG 59.864 57.143 0.00 0.00 0.00 5.52
252 253 0.686112 AGAGAGAGAAGGGAAGCGGG 60.686 60.000 0.00 0.00 0.00 6.13
253 254 2.188207 GAGAGAAGGGAAGCGGGC 59.812 66.667 0.00 0.00 0.00 6.13
254 255 2.284995 AGAGAAGGGAAGCGGGCT 60.285 61.111 0.00 0.00 0.00 5.19
255 256 2.188207 GAGAAGGGAAGCGGGCTC 59.812 66.667 0.00 0.00 0.00 4.70
256 257 2.284995 AGAAGGGAAGCGGGCTCT 60.285 61.111 0.00 0.00 0.00 4.09
257 258 1.904990 GAGAAGGGAAGCGGGCTCTT 61.905 60.000 0.00 0.00 0.00 2.85
258 259 1.746991 GAAGGGAAGCGGGCTCTTG 60.747 63.158 0.00 0.00 0.00 3.02
259 260 3.273788 AAGGGAAGCGGGCTCTTGG 62.274 63.158 0.00 0.00 0.00 3.61
260 261 4.035102 GGGAAGCGGGCTCTTGGT 62.035 66.667 0.00 0.00 0.00 3.67
261 262 2.747855 GGAAGCGGGCTCTTGGTG 60.748 66.667 0.00 0.00 0.00 4.17
262 263 2.347490 GAAGCGGGCTCTTGGTGA 59.653 61.111 0.00 0.00 0.00 4.02
263 264 1.302511 GAAGCGGGCTCTTGGTGAA 60.303 57.895 0.00 0.00 0.00 3.18
264 265 1.301677 GAAGCGGGCTCTTGGTGAAG 61.302 60.000 0.00 0.00 0.00 3.02
265 266 1.768684 AAGCGGGCTCTTGGTGAAGA 61.769 55.000 0.00 0.00 36.72 2.87
271 272 2.851798 CTCTTGGTGAAGAGCCAGC 58.148 57.895 0.00 0.00 46.80 4.85
272 273 0.324285 CTCTTGGTGAAGAGCCAGCT 59.676 55.000 0.00 0.00 46.80 4.24
273 274 0.322975 TCTTGGTGAAGAGCCAGCTC 59.677 55.000 11.78 11.78 43.03 4.09
281 282 2.888863 GAGCCAGCTCTAGCACGT 59.111 61.111 12.42 0.00 45.16 4.49
282 283 1.518133 GAGCCAGCTCTAGCACGTG 60.518 63.158 12.28 12.28 45.16 4.49
283 284 3.191539 GCCAGCTCTAGCACGTGC 61.192 66.667 32.79 32.79 45.16 5.34
293 294 4.170723 GCACGTGCTCCTAGACAC 57.829 61.111 32.55 0.00 38.21 3.67
294 295 1.587054 GCACGTGCTCCTAGACACT 59.413 57.895 32.55 0.00 38.21 3.55
295 296 0.038159 GCACGTGCTCCTAGACACTT 60.038 55.000 32.55 0.00 38.21 3.16
296 297 1.605712 GCACGTGCTCCTAGACACTTT 60.606 52.381 32.55 0.00 38.21 2.66
297 298 2.061773 CACGTGCTCCTAGACACTTTG 58.938 52.381 0.82 0.00 34.58 2.77
298 299 1.687123 ACGTGCTCCTAGACACTTTGT 59.313 47.619 0.00 0.00 34.58 2.83
299 300 2.061773 CGTGCTCCTAGACACTTTGTG 58.938 52.381 0.00 0.00 39.75 3.33
300 301 2.288213 CGTGCTCCTAGACACTTTGTGA 60.288 50.000 4.61 0.00 36.96 3.58
301 302 3.321497 GTGCTCCTAGACACTTTGTGAG 58.679 50.000 4.61 0.00 36.96 3.51
302 303 3.005897 GTGCTCCTAGACACTTTGTGAGA 59.994 47.826 4.61 0.00 36.96 3.27
303 304 3.256879 TGCTCCTAGACACTTTGTGAGAG 59.743 47.826 4.61 4.17 36.96 3.20
304 305 3.257127 GCTCCTAGACACTTTGTGAGAGT 59.743 47.826 4.61 0.00 36.96 3.24
306 307 4.470602 TCCTAGACACTTTGTGAGAGTGA 58.529 43.478 10.87 0.00 45.72 3.41
307 308 4.893524 TCCTAGACACTTTGTGAGAGTGAA 59.106 41.667 10.87 0.00 45.72 3.18
308 309 5.362717 TCCTAGACACTTTGTGAGAGTGAAA 59.637 40.000 10.87 0.00 45.72 2.69
309 310 5.694006 CCTAGACACTTTGTGAGAGTGAAAG 59.306 44.000 10.87 0.00 45.72 2.62
310 311 4.446371 AGACACTTTGTGAGAGTGAAAGG 58.554 43.478 10.87 0.00 45.72 3.11
311 312 4.080863 AGACACTTTGTGAGAGTGAAAGGT 60.081 41.667 10.87 0.00 45.72 3.50
312 313 3.941483 ACACTTTGTGAGAGTGAAAGGTG 59.059 43.478 10.87 0.00 45.72 4.00
313 314 3.313526 CACTTTGTGAGAGTGAAAGGTGG 59.686 47.826 0.00 0.00 45.72 4.61
314 315 2.638480 TTGTGAGAGTGAAAGGTGGG 57.362 50.000 0.00 0.00 0.00 4.61
315 316 0.108585 TGTGAGAGTGAAAGGTGGGC 59.891 55.000 0.00 0.00 0.00 5.36
316 317 0.606673 GTGAGAGTGAAAGGTGGGCC 60.607 60.000 0.00 0.00 0.00 5.80
317 318 1.059584 TGAGAGTGAAAGGTGGGCCA 61.060 55.000 0.00 0.00 37.19 5.36
318 319 0.329596 GAGAGTGAAAGGTGGGCCAT 59.670 55.000 10.70 0.00 37.19 4.40
319 320 1.559682 GAGAGTGAAAGGTGGGCCATA 59.440 52.381 10.70 0.00 37.19 2.74
320 321 2.173569 GAGAGTGAAAGGTGGGCCATAT 59.826 50.000 10.70 0.00 37.19 1.78
321 322 3.391296 GAGAGTGAAAGGTGGGCCATATA 59.609 47.826 10.70 0.00 37.19 0.86
322 323 3.785887 AGAGTGAAAGGTGGGCCATATAA 59.214 43.478 10.70 0.00 37.19 0.98
323 324 4.416848 AGAGTGAAAGGTGGGCCATATAAT 59.583 41.667 10.70 0.00 37.19 1.28
324 325 5.610982 AGAGTGAAAGGTGGGCCATATAATA 59.389 40.000 10.70 0.00 37.19 0.98
325 326 6.102615 AGAGTGAAAGGTGGGCCATATAATAA 59.897 38.462 10.70 0.00 37.19 1.40
326 327 6.678547 AGTGAAAGGTGGGCCATATAATAAA 58.321 36.000 10.70 0.00 37.19 1.40
327 328 7.129425 AGTGAAAGGTGGGCCATATAATAAAA 58.871 34.615 10.70 0.00 37.19 1.52
328 329 7.621683 AGTGAAAGGTGGGCCATATAATAAAAA 59.378 33.333 10.70 0.00 37.19 1.94
379 380 6.414732 TGTACATATTGGCTATAAGATGGGC 58.585 40.000 0.00 0.00 34.46 5.36
380 381 5.786121 ACATATTGGCTATAAGATGGGCT 57.214 39.130 0.00 0.00 34.46 5.19
381 382 6.891306 ACATATTGGCTATAAGATGGGCTA 57.109 37.500 0.00 0.00 34.46 3.93
382 383 7.457380 ACATATTGGCTATAAGATGGGCTAT 57.543 36.000 0.00 0.00 34.46 2.97
383 384 8.567198 ACATATTGGCTATAAGATGGGCTATA 57.433 34.615 0.00 3.91 38.02 1.31
384 385 8.654997 ACATATTGGCTATAAGATGGGCTATAG 58.345 37.037 0.00 0.00 37.41 1.31
385 386 8.874156 CATATTGGCTATAAGATGGGCTATAGA 58.126 37.037 3.21 0.00 37.41 1.98
386 387 7.944414 ATTGGCTATAAGATGGGCTATAGAT 57.056 36.000 3.21 0.00 37.22 1.98
387 388 6.737720 TGGCTATAAGATGGGCTATAGATG 57.262 41.667 3.21 0.00 37.22 2.90
388 389 6.443832 TGGCTATAAGATGGGCTATAGATGA 58.556 40.000 3.21 0.00 37.22 2.92
389 390 6.325028 TGGCTATAAGATGGGCTATAGATGAC 59.675 42.308 3.21 0.00 37.22 3.06
390 391 6.325028 GGCTATAAGATGGGCTATAGATGACA 59.675 42.308 3.21 0.00 33.43 3.58
391 392 7.016072 GGCTATAAGATGGGCTATAGATGACAT 59.984 40.741 3.21 1.49 33.43 3.06
392 393 7.871973 GCTATAAGATGGGCTATAGATGACATG 59.128 40.741 3.21 0.00 0.00 3.21
393 394 5.432680 AAGATGGGCTATAGATGACATGG 57.567 43.478 3.21 0.00 0.00 3.66
394 395 3.199508 AGATGGGCTATAGATGACATGGC 59.800 47.826 3.21 0.00 0.00 4.40
395 396 2.337849 TGGGCTATAGATGACATGGCA 58.662 47.619 2.18 2.18 31.98 4.92
396 397 2.710471 TGGGCTATAGATGACATGGCAA 59.290 45.455 4.70 0.00 31.98 4.52
397 398 3.331591 TGGGCTATAGATGACATGGCAAT 59.668 43.478 4.70 0.00 31.98 3.56
398 399 3.693085 GGGCTATAGATGACATGGCAATG 59.307 47.826 4.70 0.00 39.89 2.82
399 400 3.693085 GGCTATAGATGACATGGCAATGG 59.307 47.826 4.70 0.00 38.19 3.16
400 401 3.128242 GCTATAGATGACATGGCAATGGC 59.872 47.826 4.70 4.58 42.81 4.40
401 402 3.520691 ATAGATGACATGGCAATGGCT 57.479 42.857 4.70 3.44 42.94 4.75
402 403 2.154567 AGATGACATGGCAATGGCTT 57.845 45.000 4.70 0.72 42.94 4.35
403 404 3.301794 AGATGACATGGCAATGGCTTA 57.698 42.857 4.70 0.00 42.94 3.09
404 405 3.840991 AGATGACATGGCAATGGCTTAT 58.159 40.909 4.70 0.00 42.94 1.73
405 406 4.989277 AGATGACATGGCAATGGCTTATA 58.011 39.130 4.70 0.00 42.94 0.98
406 407 5.387788 AGATGACATGGCAATGGCTTATAA 58.612 37.500 4.70 0.00 42.94 0.98
407 408 4.916983 TGACATGGCAATGGCTTATAAC 57.083 40.909 8.80 0.00 42.94 1.89
408 409 3.636300 TGACATGGCAATGGCTTATAACC 59.364 43.478 8.80 0.00 42.94 2.85
409 410 3.636300 GACATGGCAATGGCTTATAACCA 59.364 43.478 8.59 8.59 38.95 3.67
410 411 3.638160 ACATGGCAATGGCTTATAACCAG 59.362 43.478 8.59 2.72 41.46 4.00
411 412 2.031120 TGGCAATGGCTTATAACCAGC 58.969 47.619 8.59 9.67 41.46 4.85
412 413 2.031120 GGCAATGGCTTATAACCAGCA 58.969 47.619 0.00 0.00 41.46 4.41
413 414 2.035066 GGCAATGGCTTATAACCAGCAG 59.965 50.000 0.00 8.40 41.46 4.24
414 415 2.689983 GCAATGGCTTATAACCAGCAGT 59.310 45.455 11.00 0.00 41.46 4.40
415 416 3.131046 GCAATGGCTTATAACCAGCAGTT 59.869 43.478 11.00 0.00 41.46 3.16
416 417 4.675510 CAATGGCTTATAACCAGCAGTTG 58.324 43.478 11.00 7.72 41.46 3.16
417 418 7.902860 GCAATGGCTTATAACCAGCAGTTGG 62.903 48.000 0.79 0.79 44.58 3.77
434 435 7.133891 GCAGTTGGCTATACTATTAACCATG 57.866 40.000 0.00 0.00 40.25 3.66
435 436 6.348540 GCAGTTGGCTATACTATTAACCATGC 60.349 42.308 0.00 0.00 40.25 4.06
436 437 6.936900 CAGTTGGCTATACTATTAACCATGCT 59.063 38.462 0.00 0.00 0.00 3.79
437 438 7.118390 CAGTTGGCTATACTATTAACCATGCTC 59.882 40.741 0.00 0.00 0.00 4.26
438 439 6.935240 TGGCTATACTATTAACCATGCTCT 57.065 37.500 0.00 0.00 0.00 4.09
439 440 7.316393 TGGCTATACTATTAACCATGCTCTT 57.684 36.000 0.00 0.00 0.00 2.85
440 441 8.430573 TGGCTATACTATTAACCATGCTCTTA 57.569 34.615 0.00 0.00 0.00 2.10
441 442 8.876181 TGGCTATACTATTAACCATGCTCTTAA 58.124 33.333 0.00 0.00 0.00 1.85
442 443 9.372369 GGCTATACTATTAACCATGCTCTTAAG 57.628 37.037 0.00 0.00 0.00 1.85
448 449 9.959721 ACTATTAACCATGCTCTTAAGAGAAAA 57.040 29.630 32.16 18.29 44.74 2.29
450 451 5.966742 AACCATGCTCTTAAGAGAAAACC 57.033 39.130 32.16 16.37 44.74 3.27
451 452 5.248380 ACCATGCTCTTAAGAGAAAACCT 57.752 39.130 32.16 7.54 44.74 3.50
452 453 5.006386 ACCATGCTCTTAAGAGAAAACCTG 58.994 41.667 32.16 18.22 44.74 4.00
453 454 5.006386 CCATGCTCTTAAGAGAAAACCTGT 58.994 41.667 32.16 6.43 44.74 4.00
454 455 5.474876 CCATGCTCTTAAGAGAAAACCTGTT 59.525 40.000 32.16 5.71 44.74 3.16
455 456 6.348868 CCATGCTCTTAAGAGAAAACCTGTTC 60.349 42.308 32.16 13.13 44.74 3.18
456 457 5.930135 TGCTCTTAAGAGAAAACCTGTTCT 58.070 37.500 32.16 0.00 44.74 3.01
464 465 4.810790 GAGAAAACCTGTTCTCGATCTGA 58.189 43.478 0.00 0.00 42.97 3.27
465 466 5.215252 AGAAAACCTGTTCTCGATCTGAA 57.785 39.130 0.00 0.00 32.16 3.02
466 467 5.799213 AGAAAACCTGTTCTCGATCTGAAT 58.201 37.500 0.00 0.00 32.16 2.57
467 468 6.936279 AGAAAACCTGTTCTCGATCTGAATA 58.064 36.000 0.00 0.00 32.16 1.75
468 469 7.386851 AGAAAACCTGTTCTCGATCTGAATAA 58.613 34.615 0.00 0.00 32.16 1.40
469 470 7.878127 AGAAAACCTGTTCTCGATCTGAATAAA 59.122 33.333 0.00 0.00 32.16 1.40
470 471 8.567285 AAAACCTGTTCTCGATCTGAATAAAT 57.433 30.769 0.00 0.00 0.00 1.40
471 472 8.567285 AAACCTGTTCTCGATCTGAATAAATT 57.433 30.769 0.00 0.00 0.00 1.82
472 473 7.545362 ACCTGTTCTCGATCTGAATAAATTG 57.455 36.000 0.00 0.00 0.00 2.32
473 474 6.037610 ACCTGTTCTCGATCTGAATAAATTGC 59.962 38.462 0.00 0.00 0.00 3.56
474 475 6.036246 TGTTCTCGATCTGAATAAATTGCG 57.964 37.500 0.00 0.00 0.00 4.85
475 476 5.006649 TGTTCTCGATCTGAATAAATTGCGG 59.993 40.000 0.00 0.00 0.00 5.69
476 477 4.693283 TCTCGATCTGAATAAATTGCGGT 58.307 39.130 0.00 0.00 0.00 5.68
477 478 5.838529 TCTCGATCTGAATAAATTGCGGTA 58.161 37.500 0.00 0.00 0.00 4.02
478 479 5.690409 TCTCGATCTGAATAAATTGCGGTAC 59.310 40.000 0.00 0.00 0.00 3.34
479 480 5.597806 TCGATCTGAATAAATTGCGGTACT 58.402 37.500 0.00 0.00 0.00 2.73
480 481 5.690409 TCGATCTGAATAAATTGCGGTACTC 59.310 40.000 0.00 0.00 0.00 2.59
481 482 5.387444 CGATCTGAATAAATTGCGGTACTCG 60.387 44.000 0.00 0.00 42.76 4.18
482 483 4.751060 TCTGAATAAATTGCGGTACTCGT 58.249 39.130 5.79 0.00 41.72 4.18
483 484 5.893687 TCTGAATAAATTGCGGTACTCGTA 58.106 37.500 5.79 0.00 41.72 3.43
484 485 5.975344 TCTGAATAAATTGCGGTACTCGTAG 59.025 40.000 5.79 0.00 41.72 3.51
485 486 5.893687 TGAATAAATTGCGGTACTCGTAGA 58.106 37.500 5.79 0.00 41.72 2.59
486 487 6.331845 TGAATAAATTGCGGTACTCGTAGAA 58.668 36.000 5.79 0.00 41.72 2.10
487 488 6.474427 TGAATAAATTGCGGTACTCGTAGAAG 59.526 38.462 5.79 0.00 41.72 2.85
488 489 2.865343 ATTGCGGTACTCGTAGAAGG 57.135 50.000 5.79 0.00 41.72 3.46
489 490 1.825090 TTGCGGTACTCGTAGAAGGA 58.175 50.000 5.79 0.00 41.72 3.36
490 491 1.376543 TGCGGTACTCGTAGAAGGAG 58.623 55.000 5.79 0.00 41.72 3.69
491 492 1.339438 TGCGGTACTCGTAGAAGGAGT 60.339 52.381 7.36 7.36 44.48 3.85
492 493 2.093500 TGCGGTACTCGTAGAAGGAGTA 60.093 50.000 5.60 5.60 41.05 2.59
493 494 2.939103 GCGGTACTCGTAGAAGGAGTAA 59.061 50.000 10.17 0.00 44.19 2.24
494 495 3.563390 GCGGTACTCGTAGAAGGAGTAAT 59.437 47.826 10.17 0.00 44.19 1.89
495 496 4.752101 GCGGTACTCGTAGAAGGAGTAATA 59.248 45.833 10.17 0.00 44.19 0.98
496 497 5.411053 GCGGTACTCGTAGAAGGAGTAATAT 59.589 44.000 10.17 0.00 44.19 1.28
497 498 6.402011 GCGGTACTCGTAGAAGGAGTAATATC 60.402 46.154 10.17 0.71 44.19 1.63
498 499 6.648310 CGGTACTCGTAGAAGGAGTAATATCA 59.352 42.308 10.17 0.00 44.19 2.15
499 500 7.333921 CGGTACTCGTAGAAGGAGTAATATCAT 59.666 40.741 10.17 0.00 44.19 2.45
500 501 9.664332 GGTACTCGTAGAAGGAGTAATATCATA 57.336 37.037 10.17 0.00 44.19 2.15
532 533 7.675270 ATTTTAGTAGTACTACAATGCGTCG 57.325 36.000 29.87 0.00 38.48 5.12
544 545 2.354773 GCGTCGCCCTATTCTCCG 60.355 66.667 5.75 0.00 0.00 4.63
559 560 1.346722 TCTCCGTCCTCAGTTTTTCCC 59.653 52.381 0.00 0.00 0.00 3.97
561 562 0.953960 CCGTCCTCAGTTTTTCCCCG 60.954 60.000 0.00 0.00 0.00 5.73
562 563 0.250166 CGTCCTCAGTTTTTCCCCGT 60.250 55.000 0.00 0.00 0.00 5.28
563 564 1.520494 GTCCTCAGTTTTTCCCCGTC 58.480 55.000 0.00 0.00 0.00 4.79
564 565 1.071857 GTCCTCAGTTTTTCCCCGTCT 59.928 52.381 0.00 0.00 0.00 4.18
566 567 1.880027 CCTCAGTTTTTCCCCGTCTTG 59.120 52.381 0.00 0.00 0.00 3.02
567 568 2.572290 CTCAGTTTTTCCCCGTCTTGT 58.428 47.619 0.00 0.00 0.00 3.16
568 569 2.548480 CTCAGTTTTTCCCCGTCTTGTC 59.452 50.000 0.00 0.00 0.00 3.18
614 615 7.714377 TGAAAGAAAAATCCTGCAGCAATTTAA 59.286 29.630 19.56 1.05 0.00 1.52
680 684 6.594159 ACAGGGATAAGAGACAAATAACAACG 59.406 38.462 0.00 0.00 0.00 4.10
689 693 7.627340 AGAGACAAATAACAACGTGTACAAAG 58.373 34.615 0.00 0.00 0.00 2.77
694 698 6.870971 AATAACAACGTGTACAAAGGACAT 57.129 33.333 0.00 0.00 0.00 3.06
705 709 8.120465 CGTGTACAAAGGACATTCCAATTATAC 58.880 37.037 0.00 0.00 39.61 1.47
709 713 7.182060 ACAAAGGACATTCCAATTATACCTGT 58.818 34.615 0.00 0.00 39.61 4.00
710 714 7.339466 ACAAAGGACATTCCAATTATACCTGTC 59.661 37.037 0.00 0.00 39.61 3.51
711 715 6.831664 AGGACATTCCAATTATACCTGTCT 57.168 37.500 0.00 0.00 39.61 3.41
713 717 5.998363 GGACATTCCAATTATACCTGTCTCC 59.002 44.000 0.00 0.00 36.28 3.71
714 718 6.183361 GGACATTCCAATTATACCTGTCTCCT 60.183 42.308 0.00 0.00 36.28 3.69
717 726 8.778059 ACATTCCAATTATACCTGTCTCCTTTA 58.222 33.333 0.00 0.00 0.00 1.85
753 762 3.156293 TCCAAACATAGCACAAGCACAT 58.844 40.909 0.00 0.00 45.49 3.21
762 771 1.603456 CACAAGCACATGGGTACACA 58.397 50.000 0.00 0.00 0.00 3.72
833 846 1.889829 AGAGAAGAGTGACAGGAACCG 59.110 52.381 0.00 0.00 0.00 4.44
853 866 3.427503 CCGGTAACAAAAATAGGCAGCTG 60.428 47.826 10.11 10.11 0.00 4.24
886 899 0.105964 TCAAGTGTGTCTTCCCCACG 59.894 55.000 0.00 0.00 35.56 4.94
887 900 0.105964 CAAGTGTGTCTTCCCCACGA 59.894 55.000 0.00 0.00 35.56 4.35
888 901 0.393077 AAGTGTGTCTTCCCCACGAG 59.607 55.000 0.00 0.00 35.56 4.18
889 902 1.004918 GTGTGTCTTCCCCACGAGG 60.005 63.158 0.00 0.00 35.56 4.63
890 903 2.047179 GTGTCTTCCCCACGAGGC 60.047 66.667 0.00 0.00 0.00 4.70
891 904 3.319198 TGTCTTCCCCACGAGGCC 61.319 66.667 0.00 0.00 0.00 5.19
892 905 3.003763 GTCTTCCCCACGAGGCCT 61.004 66.667 3.86 3.86 0.00 5.19
893 906 2.683933 TCTTCCCCACGAGGCCTC 60.684 66.667 23.79 23.79 0.00 4.70
894 907 3.787001 CTTCCCCACGAGGCCTCC 61.787 72.222 27.20 9.59 0.00 4.30
895 908 4.332543 TTCCCCACGAGGCCTCCT 62.333 66.667 27.20 13.21 36.03 3.69
896 909 2.873557 CTTCCCCACGAGGCCTCCTA 62.874 65.000 27.20 3.28 31.76 2.94
897 910 2.840102 CCCCACGAGGCCTCCTAG 60.840 72.222 27.20 15.57 31.76 3.02
898 911 3.541713 CCCACGAGGCCTCCTAGC 61.542 72.222 27.20 2.27 31.76 3.42
899 912 2.443016 CCACGAGGCCTCCTAGCT 60.443 66.667 27.20 1.40 31.76 3.32
900 913 1.152735 CCACGAGGCCTCCTAGCTA 60.153 63.158 27.20 0.00 31.76 3.32
901 914 1.175983 CCACGAGGCCTCCTAGCTAG 61.176 65.000 27.20 14.20 31.76 3.42
946 1004 2.124942 CGCAGGGGAGGAAGAAGC 60.125 66.667 0.00 0.00 0.00 3.86
982 1040 0.905357 ACCGGATCAACTGAGGAAGG 59.095 55.000 9.46 0.00 0.00 3.46
1232 1299 1.401539 GCTCCTTGTTCATTGTTCGCC 60.402 52.381 0.00 0.00 0.00 5.54
1914 1997 9.512435 CGTATACTATGTATTTACCCAGTATGC 57.488 37.037 15.06 13.56 35.15 3.14
1969 2052 3.885297 CTGGGCTTGGATCGATGTATTTT 59.115 43.478 0.54 0.00 0.00 1.82
1970 2053 3.882888 TGGGCTTGGATCGATGTATTTTC 59.117 43.478 0.54 0.00 0.00 2.29
1971 2054 3.882888 GGGCTTGGATCGATGTATTTTCA 59.117 43.478 0.54 0.00 0.00 2.69
1972 2055 4.520492 GGGCTTGGATCGATGTATTTTCAT 59.480 41.667 0.54 0.00 0.00 2.57
1973 2056 5.010012 GGGCTTGGATCGATGTATTTTCATT 59.990 40.000 0.54 0.00 0.00 2.57
1974 2057 6.461509 GGGCTTGGATCGATGTATTTTCATTT 60.462 38.462 0.54 0.00 0.00 2.32
1975 2058 6.980397 GGCTTGGATCGATGTATTTTCATTTT 59.020 34.615 0.54 0.00 0.00 1.82
1976 2059 7.492344 GGCTTGGATCGATGTATTTTCATTTTT 59.508 33.333 0.54 0.00 0.00 1.94
1977 2060 8.534778 GCTTGGATCGATGTATTTTCATTTTTC 58.465 33.333 0.54 0.00 0.00 2.29
1978 2061 9.571810 CTTGGATCGATGTATTTTCATTTTTCA 57.428 29.630 0.54 0.00 0.00 2.69
2049 2136 4.103357 GGATCGTATGTATGTACATCGGC 58.897 47.826 12.68 4.92 45.11 5.54
2067 2154 1.468054 GGCTTGGTGTAGGTACGTACG 60.468 57.143 18.98 15.01 0.00 3.67
2068 2155 1.200020 GCTTGGTGTAGGTACGTACGT 59.800 52.381 25.98 25.98 0.00 3.57
2069 2156 2.418628 GCTTGGTGTAGGTACGTACGTA 59.581 50.000 23.60 23.60 0.00 3.57
2081 2168 1.202177 ACGTACGTACATACAAGGCGG 60.202 52.381 21.41 7.36 0.00 6.13
2082 2169 1.202177 CGTACGTACATACAAGGCGGT 60.202 52.381 24.50 0.00 0.00 5.68
2095 2182 0.607489 AGGCGGTCGTGTACAGTAGT 60.607 55.000 0.00 0.00 0.00 2.73
2096 2183 0.242017 GGCGGTCGTGTACAGTAGTT 59.758 55.000 0.00 0.00 0.00 2.24
2132 2223 3.505386 TGGTTTGAAATATGGCCACAGT 58.495 40.909 8.16 0.00 0.00 3.55
2134 2225 4.461081 TGGTTTGAAATATGGCCACAGTAC 59.539 41.667 8.16 3.43 0.00 2.73
2146 2237 2.538449 GCCACAGTACGTATCATTTCGG 59.462 50.000 0.00 0.00 0.00 4.30
2168 2260 6.006759 GGTTCACCGTATCACCTATACTAC 57.993 45.833 0.00 0.00 38.69 2.73
2174 2266 9.259832 TCACCGTATCACCTATACTACTAGATA 57.740 37.037 0.00 0.00 38.69 1.98
2175 2267 9.531942 CACCGTATCACCTATACTACTAGATAG 57.468 40.741 0.00 0.00 38.69 2.08
2176 2268 9.486123 ACCGTATCACCTATACTACTAGATAGA 57.514 37.037 0.00 0.00 38.69 1.98
2182 2274 9.945904 TCACCTATACTACTAGATAGATGTGTG 57.054 37.037 0.00 0.00 34.65 3.82
2183 2275 9.727859 CACCTATACTACTAGATAGATGTGTGT 57.272 37.037 0.00 0.00 34.65 3.72
2196 2288 8.950210 AGATAGATGTGTGTTTAATTTCCACAG 58.050 33.333 5.16 0.00 39.58 3.66
2301 2395 7.318893 TCTTGTTCAGACATTCTATGAGAGTG 58.681 38.462 0.00 0.00 37.87 3.51
2330 2424 4.270325 ACGAGAAAAAGAAGTTCTTCACCG 59.730 41.667 18.28 17.35 35.27 4.94
2336 2431 5.907866 AAAGAAGTTCTTCACCGGAAAAA 57.092 34.783 18.28 0.00 35.27 1.94
2337 2432 5.500645 AAGAAGTTCTTCACCGGAAAAAG 57.499 39.130 9.46 8.72 28.99 2.27
2358 2453 0.942962 GAGGCCGAGATTGCAATCTG 59.057 55.000 39.54 29.45 45.39 2.90
2385 2622 3.988517 GAGTTCCCGTGAAAAGTGTCTAG 59.011 47.826 0.00 0.00 30.79 2.43
2386 2623 3.387050 AGTTCCCGTGAAAAGTGTCTAGT 59.613 43.478 0.00 0.00 30.79 2.57
2387 2624 4.586001 AGTTCCCGTGAAAAGTGTCTAGTA 59.414 41.667 0.00 0.00 30.79 1.82
2390 2627 4.586001 TCCCGTGAAAAGTGTCTAGTACTT 59.414 41.667 0.00 8.64 39.92 2.24
2426 2663 3.873952 GTGTCCACTTCTTGATCTATGGC 59.126 47.826 0.00 0.00 0.00 4.40
2444 2681 2.290896 TGGCCGAGATGAAAACCTGAAT 60.291 45.455 0.00 0.00 0.00 2.57
2445 2682 2.356069 GGCCGAGATGAAAACCTGAATC 59.644 50.000 0.00 0.00 0.00 2.52
2447 2684 4.442706 GCCGAGATGAAAACCTGAATCTA 58.557 43.478 0.00 0.00 29.59 1.98
2448 2685 5.059833 GCCGAGATGAAAACCTGAATCTAT 58.940 41.667 0.00 0.00 29.59 1.98
2449 2686 5.178438 GCCGAGATGAAAACCTGAATCTATC 59.822 44.000 0.00 0.00 29.59 2.08
2450 2687 6.283694 CCGAGATGAAAACCTGAATCTATCA 58.716 40.000 0.00 0.00 36.38 2.15
2451 2688 6.201806 CCGAGATGAAAACCTGAATCTATCAC 59.798 42.308 0.00 0.00 33.47 3.06
2453 2690 7.168972 CGAGATGAAAACCTGAATCTATCACTC 59.831 40.741 0.00 0.00 33.47 3.51
2454 2691 8.088463 AGATGAAAACCTGAATCTATCACTCT 57.912 34.615 0.00 0.00 33.47 3.24
2459 2697 7.962995 AAACCTGAATCTATCACTCTCACTA 57.037 36.000 0.00 0.00 33.47 2.74
2468 2706 0.820871 CACTCTCACTACCTCCTGCC 59.179 60.000 0.00 0.00 0.00 4.85
2469 2707 0.707616 ACTCTCACTACCTCCTGCCT 59.292 55.000 0.00 0.00 0.00 4.75
2486 2724 1.544246 GCCTACCCGCAAAGTGAAAAT 59.456 47.619 0.00 0.00 0.00 1.82
2495 2733 4.913924 CCGCAAAGTGAAAATCTTCTTCAG 59.086 41.667 0.00 0.00 33.56 3.02
2496 2734 5.506317 CCGCAAAGTGAAAATCTTCTTCAGT 60.506 40.000 0.00 0.00 37.93 3.41
2497 2735 6.293407 CCGCAAAGTGAAAATCTTCTTCAGTA 60.293 38.462 0.00 0.00 35.80 2.74
2498 2736 6.575201 CGCAAAGTGAAAATCTTCTTCAGTAC 59.425 38.462 0.00 0.00 35.80 2.73
2499 2737 7.519008 CGCAAAGTGAAAATCTTCTTCAGTACT 60.519 37.037 0.00 0.00 35.80 2.73
2500 2738 8.774586 GCAAAGTGAAAATCTTCTTCAGTACTA 58.225 33.333 0.00 0.00 35.80 1.82
2535 2773 4.657969 TGGGTTTGGAAAACTTGGATTGAT 59.342 37.500 3.14 0.00 0.00 2.57
2537 2775 6.327626 TGGGTTTGGAAAACTTGGATTGATAA 59.672 34.615 3.14 0.00 0.00 1.75
2540 2778 8.093927 GGTTTGGAAAACTTGGATTGATAATGA 58.906 33.333 3.14 0.00 0.00 2.57
2563 2802 6.060028 ACATACATTAATTGCACCGATGTC 57.940 37.500 7.27 0.00 33.42 3.06
2581 2820 5.163903 CGATGTCGTCACACCATAAAAATGA 60.164 40.000 0.00 0.00 34.48 2.57
2585 2824 6.915300 TGTCGTCACACCATAAAAATGAAAAG 59.085 34.615 0.00 0.00 0.00 2.27
2610 2849 5.710099 GGGTGTCTTTGACTGAAATATTCCA 59.290 40.000 0.00 0.00 33.15 3.53
2615 2854 7.174946 TGTCTTTGACTGAAATATTCCAAGGTC 59.825 37.037 0.00 0.00 33.15 3.85
2621 2860 5.031066 TGAAATATTCCAAGGTCCTACCG 57.969 43.478 0.00 0.00 44.90 4.02
2626 2865 0.907704 TCCAAGGTCCTACCGCACAT 60.908 55.000 0.00 0.00 44.90 3.21
2627 2866 0.828022 CCAAGGTCCTACCGCACATA 59.172 55.000 0.00 0.00 44.90 2.29
2628 2867 1.208535 CCAAGGTCCTACCGCACATAA 59.791 52.381 0.00 0.00 44.90 1.90
2631 2870 4.307432 CAAGGTCCTACCGCACATAATAG 58.693 47.826 0.00 0.00 44.90 1.73
2657 2896 6.202570 TGCAATTAAAGCAAATCACTTCAACC 59.797 34.615 3.73 0.00 39.39 3.77
2668 2907 4.237976 TCACTTCAACCTGGGTTTTGTA 57.762 40.909 1.81 0.00 36.00 2.41
2669 2908 3.949113 TCACTTCAACCTGGGTTTTGTAC 59.051 43.478 1.81 0.00 36.00 2.90
2670 2909 3.951680 CACTTCAACCTGGGTTTTGTACT 59.048 43.478 1.81 0.00 36.00 2.73
2671 2910 4.401202 CACTTCAACCTGGGTTTTGTACTT 59.599 41.667 1.81 0.00 36.00 2.24
2672 2911 4.643334 ACTTCAACCTGGGTTTTGTACTTC 59.357 41.667 1.81 0.00 36.00 3.01
2673 2912 4.513406 TCAACCTGGGTTTTGTACTTCT 57.487 40.909 1.81 0.00 36.00 2.85
2674 2913 4.204012 TCAACCTGGGTTTTGTACTTCTG 58.796 43.478 1.81 0.00 36.00 3.02
2675 2914 3.945640 ACCTGGGTTTTGTACTTCTGT 57.054 42.857 0.00 0.00 0.00 3.41
2676 2915 3.816994 ACCTGGGTTTTGTACTTCTGTC 58.183 45.455 0.00 0.00 0.00 3.51
2677 2916 3.201266 ACCTGGGTTTTGTACTTCTGTCA 59.799 43.478 0.00 0.00 0.00 3.58
2678 2917 3.815401 CCTGGGTTTTGTACTTCTGTCAG 59.185 47.826 0.00 0.00 0.00 3.51
2679 2918 3.211045 TGGGTTTTGTACTTCTGTCAGC 58.789 45.455 0.00 0.00 0.00 4.26
2681 2920 3.630312 GGGTTTTGTACTTCTGTCAGCAA 59.370 43.478 0.00 0.00 0.00 3.91
2682 2921 4.497507 GGGTTTTGTACTTCTGTCAGCAAC 60.498 45.833 0.00 0.00 0.00 4.17
2683 2922 4.497507 GGTTTTGTACTTCTGTCAGCAACC 60.498 45.833 0.00 0.00 0.00 3.77
2684 2923 3.838244 TTGTACTTCTGTCAGCAACCT 57.162 42.857 0.00 0.00 0.00 3.50
2685 2924 3.838244 TGTACTTCTGTCAGCAACCTT 57.162 42.857 0.00 0.00 0.00 3.50
2686 2925 4.948341 TGTACTTCTGTCAGCAACCTTA 57.052 40.909 0.00 0.00 0.00 2.69
2687 2926 4.628074 TGTACTTCTGTCAGCAACCTTAC 58.372 43.478 0.00 0.00 0.00 2.34
2690 2929 2.543777 TCTGTCAGCAACCTTACACC 57.456 50.000 0.00 0.00 0.00 4.16
2724 2963 4.676196 GCTTGAGCAAGATATGGTTGGTTG 60.676 45.833 14.04 0.00 40.59 3.77
2725 2964 4.032960 TGAGCAAGATATGGTTGGTTGT 57.967 40.909 1.67 0.00 40.59 3.32
2726 2965 4.406456 TGAGCAAGATATGGTTGGTTGTT 58.594 39.130 1.67 0.00 40.59 2.83
2729 2968 5.783111 AGCAAGATATGGTTGGTTGTTTTC 58.217 37.500 0.00 0.00 35.94 2.29
2730 2969 5.539955 AGCAAGATATGGTTGGTTGTTTTCT 59.460 36.000 0.00 0.00 35.94 2.52
2731 2970 5.863935 GCAAGATATGGTTGGTTGTTTTCTC 59.136 40.000 0.00 0.00 0.00 2.87
2732 2971 5.880054 AGATATGGTTGGTTGTTTTCTCG 57.120 39.130 0.00 0.00 0.00 4.04
2734 2973 2.421751 TGGTTGGTTGTTTTCTCGGA 57.578 45.000 0.00 0.00 0.00 4.55
2736 2975 2.621055 TGGTTGGTTGTTTTCTCGGATG 59.379 45.455 0.00 0.00 0.00 3.51
2741 2989 2.095919 GGTTGTTTTCTCGGATGGTTCG 60.096 50.000 0.00 0.00 0.00 3.95
2745 2993 3.055675 TGTTTTCTCGGATGGTTCGGTAT 60.056 43.478 0.00 0.00 0.00 2.73
2754 3002 2.303163 TGGTTCGGTATCACATTCGG 57.697 50.000 0.00 0.00 0.00 4.30
2791 3039 1.990060 CAAAGCCCCTCTCCTCGGA 60.990 63.158 0.00 0.00 0.00 4.55
2793 3041 4.824515 AGCCCCTCTCCTCGGACG 62.825 72.222 0.00 0.00 0.00 4.79
2795 3043 2.829458 CCCCTCTCCTCGGACGTC 60.829 72.222 7.13 7.13 0.00 4.34
2809 3057 5.107453 CCTCGGACGTCTAATTATTGCATTC 60.107 44.000 16.46 0.00 0.00 2.67
2868 3137 4.039366 AGAACTCTAACACACTTCCTCCAC 59.961 45.833 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.535030 AGTCCCGCAACTTCTAAAAAGAAAT 59.465 36.000 0.00 0.00 0.00 2.17
1 2 4.885325 AGTCCCGCAACTTCTAAAAAGAAA 59.115 37.500 0.00 0.00 0.00 2.52
2 3 4.457466 AGTCCCGCAACTTCTAAAAAGAA 58.543 39.130 0.00 0.00 0.00 2.52
3 4 4.062991 GAGTCCCGCAACTTCTAAAAAGA 58.937 43.478 0.00 0.00 0.00 2.52
4 5 3.188667 GGAGTCCCGCAACTTCTAAAAAG 59.811 47.826 0.00 0.00 0.00 2.27
5 6 3.143728 GGAGTCCCGCAACTTCTAAAAA 58.856 45.455 0.00 0.00 0.00 1.94
6 7 2.774687 GGAGTCCCGCAACTTCTAAAA 58.225 47.619 0.00 0.00 0.00 1.52
7 8 2.467566 GGAGTCCCGCAACTTCTAAA 57.532 50.000 0.00 0.00 0.00 1.85
19 20 2.304751 TTTTAGCGAATCGGAGTCCC 57.695 50.000 4.35 0.00 0.00 4.46
20 21 2.608090 CCTTTTTAGCGAATCGGAGTCC 59.392 50.000 4.35 0.00 0.00 3.85
21 22 3.259902 ACCTTTTTAGCGAATCGGAGTC 58.740 45.455 4.35 0.00 0.00 3.36
22 23 3.329929 ACCTTTTTAGCGAATCGGAGT 57.670 42.857 4.35 0.00 0.00 3.85
23 24 5.789710 TTTACCTTTTTAGCGAATCGGAG 57.210 39.130 4.35 0.00 0.00 4.63
24 25 5.933463 TCTTTTACCTTTTTAGCGAATCGGA 59.067 36.000 4.35 0.00 0.00 4.55
25 26 6.091713 TCTCTTTTACCTTTTTAGCGAATCGG 59.908 38.462 4.35 0.00 0.00 4.18
26 27 7.057149 TCTCTTTTACCTTTTTAGCGAATCG 57.943 36.000 0.00 0.00 0.00 3.34
27 28 8.030744 ACTCTCTTTTACCTTTTTAGCGAATC 57.969 34.615 0.00 0.00 0.00 2.52
28 29 7.878644 AGACTCTCTTTTACCTTTTTAGCGAAT 59.121 33.333 0.00 0.00 0.00 3.34
29 30 7.215085 AGACTCTCTTTTACCTTTTTAGCGAA 58.785 34.615 0.00 0.00 0.00 4.70
30 31 6.756221 AGACTCTCTTTTACCTTTTTAGCGA 58.244 36.000 0.00 0.00 0.00 4.93
31 32 8.530269 TTAGACTCTCTTTTACCTTTTTAGCG 57.470 34.615 0.00 0.00 0.00 4.26
38 39 9.767228 GTCTCTTTTTAGACTCTCTTTTACCTT 57.233 33.333 0.00 0.00 42.21 3.50
51 52 7.148623 CGTGGTTATCCAAGTCTCTTTTTAGAC 60.149 40.741 0.00 0.00 46.15 2.59
52 53 6.872020 CGTGGTTATCCAAGTCTCTTTTTAGA 59.128 38.462 0.00 0.00 46.15 2.10
53 54 6.872020 TCGTGGTTATCCAAGTCTCTTTTTAG 59.128 38.462 5.78 0.00 46.15 1.85
54 55 6.761312 TCGTGGTTATCCAAGTCTCTTTTTA 58.239 36.000 5.78 0.00 46.15 1.52
55 56 5.617252 TCGTGGTTATCCAAGTCTCTTTTT 58.383 37.500 5.78 0.00 46.15 1.94
56 57 5.223449 TCGTGGTTATCCAAGTCTCTTTT 57.777 39.130 5.78 0.00 46.15 2.27
57 58 4.322801 CCTCGTGGTTATCCAAGTCTCTTT 60.323 45.833 5.78 0.00 46.15 2.52
58 59 3.195825 CCTCGTGGTTATCCAAGTCTCTT 59.804 47.826 5.78 0.00 46.15 2.85
59 60 2.761208 CCTCGTGGTTATCCAAGTCTCT 59.239 50.000 5.78 0.00 46.15 3.10
60 61 2.738964 GCCTCGTGGTTATCCAAGTCTC 60.739 54.545 5.26 0.00 46.15 3.36
61 62 1.207329 GCCTCGTGGTTATCCAAGTCT 59.793 52.381 5.26 0.00 46.15 3.24
62 63 1.653151 GCCTCGTGGTTATCCAAGTC 58.347 55.000 5.26 0.00 46.15 3.01
63 64 0.252197 GGCCTCGTGGTTATCCAAGT 59.748 55.000 5.26 0.00 46.15 3.16
64 65 0.463833 GGGCCTCGTGGTTATCCAAG 60.464 60.000 0.84 0.00 46.15 3.61
65 66 1.605453 GGGCCTCGTGGTTATCCAA 59.395 57.895 0.84 0.00 46.15 3.53
66 67 2.727392 CGGGCCTCGTGGTTATCCA 61.727 63.158 0.84 0.00 42.05 3.41
67 68 2.108362 CGGGCCTCGTGGTTATCC 59.892 66.667 0.84 0.00 35.27 2.59
68 69 2.588034 GCGGGCCTCGTGGTTATC 60.588 66.667 13.97 0.00 41.72 1.75
69 70 3.395702 TGCGGGCCTCGTGGTTAT 61.396 61.111 13.97 0.00 41.72 1.89
70 71 4.382320 GTGCGGGCCTCGTGGTTA 62.382 66.667 13.97 0.00 41.72 2.85
81 82 4.508128 ATAGGCGTCGTGTGCGGG 62.508 66.667 0.00 0.00 38.89 6.13
82 83 3.254654 CATAGGCGTCGTGTGCGG 61.255 66.667 0.00 0.00 38.89 5.69
83 84 2.202557 TCATAGGCGTCGTGTGCG 60.203 61.111 0.00 0.00 39.92 5.34
84 85 0.867753 CTCTCATAGGCGTCGTGTGC 60.868 60.000 0.00 0.00 0.00 4.57
85 86 0.248661 CCTCTCATAGGCGTCGTGTG 60.249 60.000 0.00 0.00 38.97 3.82
86 87 1.384989 CCCTCTCATAGGCGTCGTGT 61.385 60.000 0.00 0.00 45.03 4.49
87 88 1.360551 CCCTCTCATAGGCGTCGTG 59.639 63.158 0.00 0.00 45.03 4.35
88 89 2.491022 GCCCTCTCATAGGCGTCGT 61.491 63.158 0.00 0.00 45.03 4.34
89 90 2.336809 GCCCTCTCATAGGCGTCG 59.663 66.667 0.00 0.00 45.03 5.12
93 94 3.631046 CCCCGCCCTCTCATAGGC 61.631 72.222 0.00 0.00 45.03 3.93
94 95 2.925170 CCCCCGCCCTCTCATAGG 60.925 72.222 0.00 0.00 46.09 2.57
95 96 1.766461 AACCCCCGCCCTCTCATAG 60.766 63.158 0.00 0.00 0.00 2.23
96 97 2.070039 CAACCCCCGCCCTCTCATA 61.070 63.158 0.00 0.00 0.00 2.15
97 98 3.411517 CAACCCCCGCCCTCTCAT 61.412 66.667 0.00 0.00 0.00 2.90
105 106 2.044352 ATTGTAGGCAACCCCCGC 60.044 61.111 0.00 0.00 37.44 6.13
106 107 1.001393 ACATTGTAGGCAACCCCCG 60.001 57.895 0.00 0.00 37.44 5.73
107 108 0.039035 TGACATTGTAGGCAACCCCC 59.961 55.000 0.00 0.00 37.44 5.40
108 109 2.024414 GATGACATTGTAGGCAACCCC 58.976 52.381 0.00 0.00 37.44 4.95
109 110 2.423538 GTGATGACATTGTAGGCAACCC 59.576 50.000 0.00 0.00 37.44 4.11
110 111 3.347216 AGTGATGACATTGTAGGCAACC 58.653 45.455 0.00 0.00 37.44 3.77
111 112 5.376854 AAAGTGATGACATTGTAGGCAAC 57.623 39.130 0.00 0.00 37.44 4.17
112 113 5.771469 CAAAAGTGATGACATTGTAGGCAA 58.229 37.500 0.00 0.00 39.16 4.52
113 114 4.321156 GCAAAAGTGATGACATTGTAGGCA 60.321 41.667 0.00 0.00 0.00 4.75
114 115 4.082571 AGCAAAAGTGATGACATTGTAGGC 60.083 41.667 0.00 0.00 0.00 3.93
115 116 5.181811 TGAGCAAAAGTGATGACATTGTAGG 59.818 40.000 0.00 0.00 0.00 3.18
116 117 6.245115 TGAGCAAAAGTGATGACATTGTAG 57.755 37.500 0.00 0.00 0.00 2.74
117 118 5.181811 CCTGAGCAAAAGTGATGACATTGTA 59.818 40.000 0.00 0.00 0.00 2.41
118 119 4.022589 CCTGAGCAAAAGTGATGACATTGT 60.023 41.667 0.00 0.00 0.00 2.71
119 120 4.482386 CCTGAGCAAAAGTGATGACATTG 58.518 43.478 0.00 0.00 0.00 2.82
120 121 3.057033 GCCTGAGCAAAAGTGATGACATT 60.057 43.478 0.00 0.00 39.53 2.71
121 122 2.490903 GCCTGAGCAAAAGTGATGACAT 59.509 45.455 0.00 0.00 39.53 3.06
122 123 1.881973 GCCTGAGCAAAAGTGATGACA 59.118 47.619 0.00 0.00 39.53 3.58
123 124 2.626088 GCCTGAGCAAAAGTGATGAC 57.374 50.000 0.00 0.00 39.53 3.06
135 136 0.108615 TCTAAGTCGCTTGCCTGAGC 60.109 55.000 2.86 0.00 39.29 4.26
136 137 1.919918 CTCTAAGTCGCTTGCCTGAG 58.080 55.000 2.86 0.00 0.00 3.35
137 138 0.108615 GCTCTAAGTCGCTTGCCTGA 60.109 55.000 2.86 0.00 0.00 3.86
138 139 1.086634 GGCTCTAAGTCGCTTGCCTG 61.087 60.000 10.23 0.00 37.58 4.85
139 140 1.219393 GGCTCTAAGTCGCTTGCCT 59.781 57.895 10.23 0.00 37.58 4.75
140 141 1.079127 TGGCTCTAAGTCGCTTGCC 60.079 57.895 10.45 10.45 40.62 4.52
141 142 0.390472 ACTGGCTCTAAGTCGCTTGC 60.390 55.000 2.86 0.00 0.00 4.01
142 143 2.094700 TGTACTGGCTCTAAGTCGCTTG 60.095 50.000 0.00 0.00 0.00 4.01
143 144 2.168496 TGTACTGGCTCTAAGTCGCTT 58.832 47.619 0.00 0.00 0.00 4.68
144 145 1.835494 TGTACTGGCTCTAAGTCGCT 58.165 50.000 0.00 0.00 0.00 4.93
145 146 2.649331 TTGTACTGGCTCTAAGTCGC 57.351 50.000 0.00 0.00 0.00 5.19
146 147 5.752892 TCTATTGTACTGGCTCTAAGTCG 57.247 43.478 0.00 0.00 0.00 4.18
147 148 5.300792 AGCTCTATTGTACTGGCTCTAAGTC 59.699 44.000 0.00 0.00 0.00 3.01
148 149 5.068460 CAGCTCTATTGTACTGGCTCTAAGT 59.932 44.000 0.00 0.00 0.00 2.24
149 150 5.300539 TCAGCTCTATTGTACTGGCTCTAAG 59.699 44.000 0.00 0.00 0.00 2.18
150 151 5.201243 TCAGCTCTATTGTACTGGCTCTAA 58.799 41.667 0.00 0.00 0.00 2.10
151 152 4.793201 TCAGCTCTATTGTACTGGCTCTA 58.207 43.478 0.00 0.00 0.00 2.43
152 153 3.636300 CTCAGCTCTATTGTACTGGCTCT 59.364 47.826 0.00 0.00 0.00 4.09
153 154 3.383185 ACTCAGCTCTATTGTACTGGCTC 59.617 47.826 0.00 0.00 0.00 4.70
154 155 3.370104 ACTCAGCTCTATTGTACTGGCT 58.630 45.455 0.00 0.00 0.00 4.75
155 156 3.131223 TGACTCAGCTCTATTGTACTGGC 59.869 47.826 0.00 0.00 0.00 4.85
156 157 4.930963 CTGACTCAGCTCTATTGTACTGG 58.069 47.826 0.00 0.00 0.00 4.00
170 171 4.662468 TTCTTATAGCCAGCTGACTCAG 57.338 45.455 17.39 6.38 34.12 3.35
171 172 5.620738 ATTTCTTATAGCCAGCTGACTCA 57.379 39.130 17.39 0.00 0.00 3.41
172 173 7.713073 AGTTTATTTCTTATAGCCAGCTGACTC 59.287 37.037 17.39 3.75 0.00 3.36
173 174 7.569240 AGTTTATTTCTTATAGCCAGCTGACT 58.431 34.615 17.39 12.46 0.00 3.41
174 175 7.793927 AGTTTATTTCTTATAGCCAGCTGAC 57.206 36.000 17.39 2.52 0.00 3.51
175 176 8.705594 ACTAGTTTATTTCTTATAGCCAGCTGA 58.294 33.333 17.39 0.00 0.00 4.26
176 177 8.894768 ACTAGTTTATTTCTTATAGCCAGCTG 57.105 34.615 6.78 6.78 0.00 4.24
196 197 8.643324 CCTCCAACTAAGCAAGAATATACTAGT 58.357 37.037 0.00 0.00 0.00 2.57
197 198 8.861086 TCCTCCAACTAAGCAAGAATATACTAG 58.139 37.037 0.00 0.00 0.00 2.57
198 199 8.777578 TCCTCCAACTAAGCAAGAATATACTA 57.222 34.615 0.00 0.00 0.00 1.82
199 200 7.676683 TCCTCCAACTAAGCAAGAATATACT 57.323 36.000 0.00 0.00 0.00 2.12
200 201 8.732746 TTTCCTCCAACTAAGCAAGAATATAC 57.267 34.615 0.00 0.00 0.00 1.47
201 202 8.768397 TCTTTCCTCCAACTAAGCAAGAATATA 58.232 33.333 0.00 0.00 0.00 0.86
202 203 7.633789 TCTTTCCTCCAACTAAGCAAGAATAT 58.366 34.615 0.00 0.00 0.00 1.28
203 204 7.016153 TCTTTCCTCCAACTAAGCAAGAATA 57.984 36.000 0.00 0.00 0.00 1.75
204 205 5.880901 TCTTTCCTCCAACTAAGCAAGAAT 58.119 37.500 0.00 0.00 0.00 2.40
205 206 5.071788 TCTCTTTCCTCCAACTAAGCAAGAA 59.928 40.000 0.00 0.00 0.00 2.52
206 207 4.593206 TCTCTTTCCTCCAACTAAGCAAGA 59.407 41.667 0.00 0.00 0.00 3.02
207 208 4.899502 TCTCTTTCCTCCAACTAAGCAAG 58.100 43.478 0.00 0.00 0.00 4.01
208 209 4.974645 TCTCTTTCCTCCAACTAAGCAA 57.025 40.909 0.00 0.00 0.00 3.91
209 210 4.593206 TCTTCTCTTTCCTCCAACTAAGCA 59.407 41.667 0.00 0.00 0.00 3.91
210 211 5.153950 TCTTCTCTTTCCTCCAACTAAGC 57.846 43.478 0.00 0.00 0.00 3.09
211 212 6.998802 TCTTCTTCTCTTTCCTCCAACTAAG 58.001 40.000 0.00 0.00 0.00 2.18
212 213 6.782988 TCTCTTCTTCTCTTTCCTCCAACTAA 59.217 38.462 0.00 0.00 0.00 2.24
213 214 6.315714 TCTCTTCTTCTCTTTCCTCCAACTA 58.684 40.000 0.00 0.00 0.00 2.24
214 215 5.151454 TCTCTTCTTCTCTTTCCTCCAACT 58.849 41.667 0.00 0.00 0.00 3.16
215 216 5.245075 TCTCTCTTCTTCTCTTTCCTCCAAC 59.755 44.000 0.00 0.00 0.00 3.77
216 217 5.398236 TCTCTCTTCTTCTCTTTCCTCCAA 58.602 41.667 0.00 0.00 0.00 3.53
217 218 5.004361 TCTCTCTTCTTCTCTTTCCTCCA 57.996 43.478 0.00 0.00 0.00 3.86
218 219 5.261216 TCTCTCTCTTCTTCTCTTTCCTCC 58.739 45.833 0.00 0.00 0.00 4.30
219 220 6.127619 CCTTCTCTCTCTTCTTCTCTTTCCTC 60.128 46.154 0.00 0.00 0.00 3.71
220 221 5.716703 CCTTCTCTCTCTTCTTCTCTTTCCT 59.283 44.000 0.00 0.00 0.00 3.36
221 222 5.105351 CCCTTCTCTCTCTTCTTCTCTTTCC 60.105 48.000 0.00 0.00 0.00 3.13
222 223 5.714806 TCCCTTCTCTCTCTTCTTCTCTTTC 59.285 44.000 0.00 0.00 0.00 2.62
223 224 5.650283 TCCCTTCTCTCTCTTCTTCTCTTT 58.350 41.667 0.00 0.00 0.00 2.52
224 225 5.269554 TCCCTTCTCTCTCTTCTTCTCTT 57.730 43.478 0.00 0.00 0.00 2.85
225 226 4.946160 TCCCTTCTCTCTCTTCTTCTCT 57.054 45.455 0.00 0.00 0.00 3.10
226 227 4.142160 GCTTCCCTTCTCTCTCTTCTTCTC 60.142 50.000 0.00 0.00 0.00 2.87
227 228 3.769300 GCTTCCCTTCTCTCTCTTCTTCT 59.231 47.826 0.00 0.00 0.00 2.85
228 229 3.428862 CGCTTCCCTTCTCTCTCTTCTTC 60.429 52.174 0.00 0.00 0.00 2.87
229 230 2.495669 CGCTTCCCTTCTCTCTCTTCTT 59.504 50.000 0.00 0.00 0.00 2.52
230 231 2.099405 CGCTTCCCTTCTCTCTCTTCT 58.901 52.381 0.00 0.00 0.00 2.85
231 232 1.136110 CCGCTTCCCTTCTCTCTCTTC 59.864 57.143 0.00 0.00 0.00 2.87
232 233 1.190643 CCGCTTCCCTTCTCTCTCTT 58.809 55.000 0.00 0.00 0.00 2.85
233 234 0.686112 CCCGCTTCCCTTCTCTCTCT 60.686 60.000 0.00 0.00 0.00 3.10
234 235 1.819905 CCCGCTTCCCTTCTCTCTC 59.180 63.158 0.00 0.00 0.00 3.20
235 236 2.363172 GCCCGCTTCCCTTCTCTCT 61.363 63.158 0.00 0.00 0.00 3.10
236 237 2.188207 GCCCGCTTCCCTTCTCTC 59.812 66.667 0.00 0.00 0.00 3.20
237 238 2.284995 AGCCCGCTTCCCTTCTCT 60.285 61.111 0.00 0.00 0.00 3.10
238 239 1.904990 AAGAGCCCGCTTCCCTTCTC 61.905 60.000 0.00 0.00 0.00 2.87
239 240 1.920835 AAGAGCCCGCTTCCCTTCT 60.921 57.895 0.00 0.00 0.00 2.85
240 241 1.746991 CAAGAGCCCGCTTCCCTTC 60.747 63.158 0.00 0.00 0.00 3.46
241 242 2.352805 CAAGAGCCCGCTTCCCTT 59.647 61.111 0.00 0.00 0.00 3.95
242 243 3.721706 CCAAGAGCCCGCTTCCCT 61.722 66.667 0.00 0.00 0.00 4.20
243 244 4.035102 ACCAAGAGCCCGCTTCCC 62.035 66.667 0.00 0.00 0.00 3.97
244 245 2.747855 CACCAAGAGCCCGCTTCC 60.748 66.667 0.00 0.00 0.00 3.46
245 246 1.301677 CTTCACCAAGAGCCCGCTTC 61.302 60.000 0.00 0.00 0.00 3.86
246 247 1.302832 CTTCACCAAGAGCCCGCTT 60.303 57.895 0.00 0.00 0.00 4.68
247 248 2.217038 TCTTCACCAAGAGCCCGCT 61.217 57.895 0.00 0.00 33.38 5.52
248 249 2.347490 TCTTCACCAAGAGCCCGC 59.653 61.111 0.00 0.00 33.38 6.13
254 255 0.322975 GAGCTGGCTCTTCACCAAGA 59.677 55.000 14.51 0.00 39.80 3.02
255 256 2.851798 GAGCTGGCTCTTCACCAAG 58.148 57.895 14.51 0.00 39.80 3.61
264 265 1.518133 CACGTGCTAGAGCTGGCTC 60.518 63.158 14.02 14.02 42.66 4.70
265 266 2.575993 CACGTGCTAGAGCTGGCT 59.424 61.111 0.82 0.00 42.66 4.75
266 267 3.191539 GCACGTGCTAGAGCTGGC 61.192 66.667 32.55 1.87 42.66 4.85
276 277 0.038159 AAGTGTCTAGGAGCACGTGC 60.038 55.000 32.79 32.79 40.26 5.34
277 278 2.061773 CAAAGTGTCTAGGAGCACGTG 58.938 52.381 12.28 12.28 40.26 4.49
278 279 1.687123 ACAAAGTGTCTAGGAGCACGT 59.313 47.619 0.00 0.00 40.26 4.49
279 280 2.061773 CACAAAGTGTCTAGGAGCACG 58.938 52.381 0.00 0.00 40.26 5.34
280 281 3.005897 TCTCACAAAGTGTCTAGGAGCAC 59.994 47.826 0.00 0.00 34.79 4.40
281 282 3.230976 TCTCACAAAGTGTCTAGGAGCA 58.769 45.455 0.00 0.00 34.79 4.26
282 283 3.257127 ACTCTCACAAAGTGTCTAGGAGC 59.743 47.826 0.00 0.00 34.79 4.70
283 284 4.520874 TCACTCTCACAAAGTGTCTAGGAG 59.479 45.833 3.45 0.00 43.68 3.69
284 285 4.470602 TCACTCTCACAAAGTGTCTAGGA 58.529 43.478 3.45 0.00 43.68 2.94
285 286 4.855715 TCACTCTCACAAAGTGTCTAGG 57.144 45.455 3.45 0.00 43.68 3.02
286 287 5.694006 CCTTTCACTCTCACAAAGTGTCTAG 59.306 44.000 3.45 0.00 43.68 2.43
287 288 5.128827 ACCTTTCACTCTCACAAAGTGTCTA 59.871 40.000 3.45 0.00 43.68 2.59
288 289 4.080863 ACCTTTCACTCTCACAAAGTGTCT 60.081 41.667 3.45 0.00 43.68 3.41
289 290 4.034510 CACCTTTCACTCTCACAAAGTGTC 59.965 45.833 3.45 0.00 43.68 3.67
290 291 3.941483 CACCTTTCACTCTCACAAAGTGT 59.059 43.478 3.45 0.00 43.68 3.55
291 292 3.313526 CCACCTTTCACTCTCACAAAGTG 59.686 47.826 0.00 0.00 44.43 3.16
292 293 3.545703 CCACCTTTCACTCTCACAAAGT 58.454 45.455 0.00 0.00 0.00 2.66
293 294 2.880890 CCCACCTTTCACTCTCACAAAG 59.119 50.000 0.00 0.00 0.00 2.77
294 295 2.930950 CCCACCTTTCACTCTCACAAA 58.069 47.619 0.00 0.00 0.00 2.83
295 296 1.476833 GCCCACCTTTCACTCTCACAA 60.477 52.381 0.00 0.00 0.00 3.33
296 297 0.108585 GCCCACCTTTCACTCTCACA 59.891 55.000 0.00 0.00 0.00 3.58
297 298 0.606673 GGCCCACCTTTCACTCTCAC 60.607 60.000 0.00 0.00 0.00 3.51
298 299 1.059584 TGGCCCACCTTTCACTCTCA 61.060 55.000 0.00 0.00 36.63 3.27
299 300 0.329596 ATGGCCCACCTTTCACTCTC 59.670 55.000 0.00 0.00 36.63 3.20
300 301 1.668826 TATGGCCCACCTTTCACTCT 58.331 50.000 0.00 0.00 36.63 3.24
301 302 2.736670 ATATGGCCCACCTTTCACTC 57.263 50.000 0.00 0.00 36.63 3.51
302 303 4.814224 ATTATATGGCCCACCTTTCACT 57.186 40.909 0.00 0.00 36.63 3.41
303 304 6.969993 TTTATTATATGGCCCACCTTTCAC 57.030 37.500 0.00 0.00 36.63 3.18
304 305 7.979786 TTTTTATTATATGGCCCACCTTTCA 57.020 32.000 0.00 0.00 36.63 2.69
353 354 7.557719 GCCCATCTTATAGCCAATATGTACAAT 59.442 37.037 0.00 0.00 0.00 2.71
354 355 6.884295 GCCCATCTTATAGCCAATATGTACAA 59.116 38.462 0.00 0.00 0.00 2.41
355 356 6.215431 AGCCCATCTTATAGCCAATATGTACA 59.785 38.462 0.00 0.00 0.00 2.90
356 357 6.653989 AGCCCATCTTATAGCCAATATGTAC 58.346 40.000 0.00 0.00 0.00 2.90
357 358 6.891306 AGCCCATCTTATAGCCAATATGTA 57.109 37.500 0.00 0.00 0.00 2.29
358 359 5.786121 AGCCCATCTTATAGCCAATATGT 57.214 39.130 0.00 0.00 0.00 2.29
359 360 8.874156 TCTATAGCCCATCTTATAGCCAATATG 58.126 37.037 0.00 0.00 0.00 1.78
360 361 9.626840 ATCTATAGCCCATCTTATAGCCAATAT 57.373 33.333 0.00 0.00 0.00 1.28
361 362 8.874156 CATCTATAGCCCATCTTATAGCCAATA 58.126 37.037 0.00 0.00 0.00 1.90
362 363 7.570232 TCATCTATAGCCCATCTTATAGCCAAT 59.430 37.037 0.00 0.00 0.00 3.16
363 364 6.902974 TCATCTATAGCCCATCTTATAGCCAA 59.097 38.462 0.00 0.00 0.00 4.52
364 365 6.325028 GTCATCTATAGCCCATCTTATAGCCA 59.675 42.308 0.00 0.00 0.00 4.75
365 366 6.325028 TGTCATCTATAGCCCATCTTATAGCC 59.675 42.308 0.00 0.00 0.00 3.93
366 367 7.353414 TGTCATCTATAGCCCATCTTATAGC 57.647 40.000 0.00 0.00 0.00 2.97
367 368 8.366401 CCATGTCATCTATAGCCCATCTTATAG 58.634 40.741 0.00 0.00 0.00 1.31
368 369 7.202038 GCCATGTCATCTATAGCCCATCTTATA 60.202 40.741 0.00 0.00 0.00 0.98
369 370 6.409005 GCCATGTCATCTATAGCCCATCTTAT 60.409 42.308 0.00 0.00 0.00 1.73
370 371 5.104776 GCCATGTCATCTATAGCCCATCTTA 60.105 44.000 0.00 0.00 0.00 2.10
371 372 4.324099 GCCATGTCATCTATAGCCCATCTT 60.324 45.833 0.00 0.00 0.00 2.40
372 373 3.199508 GCCATGTCATCTATAGCCCATCT 59.800 47.826 0.00 0.00 0.00 2.90
373 374 3.054875 TGCCATGTCATCTATAGCCCATC 60.055 47.826 0.00 0.00 0.00 3.51
374 375 2.914941 TGCCATGTCATCTATAGCCCAT 59.085 45.455 0.00 0.00 0.00 4.00
375 376 2.337849 TGCCATGTCATCTATAGCCCA 58.662 47.619 0.00 0.00 0.00 5.36
376 377 3.423539 TTGCCATGTCATCTATAGCCC 57.576 47.619 0.00 0.00 0.00 5.19
377 378 3.693085 CCATTGCCATGTCATCTATAGCC 59.307 47.826 0.00 0.00 0.00 3.93
378 379 3.128242 GCCATTGCCATGTCATCTATAGC 59.872 47.826 0.00 0.00 0.00 2.97
379 380 4.586884 AGCCATTGCCATGTCATCTATAG 58.413 43.478 0.00 0.00 38.69 1.31
380 381 4.645863 AGCCATTGCCATGTCATCTATA 57.354 40.909 0.00 0.00 38.69 1.31
381 382 3.520691 AGCCATTGCCATGTCATCTAT 57.479 42.857 0.00 0.00 38.69 1.98
382 383 3.301794 AAGCCATTGCCATGTCATCTA 57.698 42.857 0.00 0.00 38.69 1.98
383 384 2.154567 AAGCCATTGCCATGTCATCT 57.845 45.000 0.00 0.00 38.69 2.90
384 385 5.464168 GTTATAAGCCATTGCCATGTCATC 58.536 41.667 0.00 0.00 38.69 2.92
385 386 4.281688 GGTTATAAGCCATTGCCATGTCAT 59.718 41.667 3.16 0.00 38.69 3.06
386 387 3.636300 GGTTATAAGCCATTGCCATGTCA 59.364 43.478 3.16 0.00 38.69 3.58
387 388 3.636300 TGGTTATAAGCCATTGCCATGTC 59.364 43.478 11.96 0.00 38.69 3.06
388 389 3.638160 CTGGTTATAAGCCATTGCCATGT 59.362 43.478 11.96 0.00 38.69 3.21
389 390 3.553508 GCTGGTTATAAGCCATTGCCATG 60.554 47.826 11.96 0.00 38.69 3.66
390 391 2.629617 GCTGGTTATAAGCCATTGCCAT 59.370 45.455 11.96 0.00 38.69 4.40
391 392 2.031120 GCTGGTTATAAGCCATTGCCA 58.969 47.619 11.96 0.85 38.69 4.92
392 393 2.031120 TGCTGGTTATAAGCCATTGCC 58.969 47.619 11.96 0.00 40.06 4.52
393 394 2.689983 ACTGCTGGTTATAAGCCATTGC 59.310 45.455 11.96 10.89 40.06 3.56
394 395 4.440525 CCAACTGCTGGTTATAAGCCATTG 60.441 45.833 11.96 10.18 40.78 2.82
395 396 3.701040 CCAACTGCTGGTTATAAGCCATT 59.299 43.478 11.96 0.00 40.78 3.16
396 397 3.290710 CCAACTGCTGGTTATAAGCCAT 58.709 45.455 11.96 0.00 40.78 4.40
397 398 2.722094 CCAACTGCTGGTTATAAGCCA 58.278 47.619 11.96 8.92 40.78 4.75
410 411 6.348540 GCATGGTTAATAGTATAGCCAACTGC 60.349 42.308 0.00 8.84 39.25 4.40
411 412 6.936900 AGCATGGTTAATAGTATAGCCAACTG 59.063 38.462 0.00 2.47 39.25 3.16
412 413 7.016661 AGAGCATGGTTAATAGTATAGCCAACT 59.983 37.037 0.00 5.70 39.25 3.16
413 414 7.162082 AGAGCATGGTTAATAGTATAGCCAAC 58.838 38.462 0.00 2.18 39.25 3.77
414 415 7.316393 AGAGCATGGTTAATAGTATAGCCAA 57.684 36.000 0.00 0.00 39.25 4.52
415 416 6.935240 AGAGCATGGTTAATAGTATAGCCA 57.065 37.500 0.00 3.65 39.96 4.75
416 417 9.372369 CTTAAGAGCATGGTTAATAGTATAGCC 57.628 37.037 0.00 0.00 0.00 3.93
422 423 9.959721 TTTTCTCTTAAGAGCATGGTTAATAGT 57.040 29.630 25.04 0.00 41.80 2.12
424 425 9.174166 GGTTTTCTCTTAAGAGCATGGTTAATA 57.826 33.333 25.04 7.13 41.80 0.98
425 426 7.890655 AGGTTTTCTCTTAAGAGCATGGTTAAT 59.109 33.333 25.04 5.15 41.80 1.40
426 427 7.174946 CAGGTTTTCTCTTAAGAGCATGGTTAA 59.825 37.037 25.04 11.22 41.80 2.01
427 428 6.655003 CAGGTTTTCTCTTAAGAGCATGGTTA 59.345 38.462 25.04 5.72 41.80 2.85
428 429 5.474876 CAGGTTTTCTCTTAAGAGCATGGTT 59.525 40.000 25.04 8.62 41.80 3.67
429 430 5.006386 CAGGTTTTCTCTTAAGAGCATGGT 58.994 41.667 25.04 0.00 41.80 3.55
430 431 5.006386 ACAGGTTTTCTCTTAAGAGCATGG 58.994 41.667 25.04 13.40 41.80 3.66
431 432 6.429385 AGAACAGGTTTTCTCTTAAGAGCATG 59.571 38.462 25.04 19.97 41.80 4.06
432 433 6.538263 AGAACAGGTTTTCTCTTAAGAGCAT 58.462 36.000 25.04 8.20 41.80 3.79
433 434 5.930135 AGAACAGGTTTTCTCTTAAGAGCA 58.070 37.500 25.04 13.95 41.80 4.26
434 435 5.119434 CGAGAACAGGTTTTCTCTTAAGAGC 59.881 44.000 25.04 12.43 46.46 4.09
435 436 6.448006 TCGAGAACAGGTTTTCTCTTAAGAG 58.552 40.000 24.10 24.10 46.46 2.85
436 437 6.401047 TCGAGAACAGGTTTTCTCTTAAGA 57.599 37.500 4.81 4.81 46.46 2.10
437 438 7.062839 CAGATCGAGAACAGGTTTTCTCTTAAG 59.937 40.741 10.34 0.00 46.46 1.85
438 439 6.868864 CAGATCGAGAACAGGTTTTCTCTTAA 59.131 38.462 10.34 0.00 46.46 1.85
439 440 6.208797 TCAGATCGAGAACAGGTTTTCTCTTA 59.791 38.462 10.34 0.83 46.46 2.10
440 441 5.011125 TCAGATCGAGAACAGGTTTTCTCTT 59.989 40.000 10.34 0.00 46.46 2.85
441 442 4.524714 TCAGATCGAGAACAGGTTTTCTCT 59.475 41.667 10.34 0.00 46.46 3.10
442 443 4.810790 TCAGATCGAGAACAGGTTTTCTC 58.189 43.478 3.24 3.24 45.58 2.87
443 444 4.873746 TCAGATCGAGAACAGGTTTTCT 57.126 40.909 0.00 0.00 38.60 2.52
444 445 7.596749 TTATTCAGATCGAGAACAGGTTTTC 57.403 36.000 5.89 0.00 0.00 2.29
445 446 7.979444 TTTATTCAGATCGAGAACAGGTTTT 57.021 32.000 5.89 0.00 0.00 2.43
446 447 8.454106 CAATTTATTCAGATCGAGAACAGGTTT 58.546 33.333 5.89 0.00 0.00 3.27
447 448 7.414540 GCAATTTATTCAGATCGAGAACAGGTT 60.415 37.037 5.89 0.00 0.00 3.50
448 449 6.037610 GCAATTTATTCAGATCGAGAACAGGT 59.962 38.462 5.89 0.00 0.00 4.00
449 450 6.425504 GCAATTTATTCAGATCGAGAACAGG 58.574 40.000 5.89 0.00 0.00 4.00
450 451 6.125419 CGCAATTTATTCAGATCGAGAACAG 58.875 40.000 5.89 0.00 0.00 3.16
451 452 5.006649 CCGCAATTTATTCAGATCGAGAACA 59.993 40.000 5.89 0.00 0.00 3.18
452 453 5.006746 ACCGCAATTTATTCAGATCGAGAAC 59.993 40.000 5.89 0.00 0.00 3.01
453 454 5.116180 ACCGCAATTTATTCAGATCGAGAA 58.884 37.500 6.18 6.18 0.00 2.87
454 455 4.693283 ACCGCAATTTATTCAGATCGAGA 58.307 39.130 0.00 0.00 0.00 4.04
455 456 5.692204 AGTACCGCAATTTATTCAGATCGAG 59.308 40.000 0.00 0.00 0.00 4.04
456 457 5.597806 AGTACCGCAATTTATTCAGATCGA 58.402 37.500 0.00 0.00 0.00 3.59
457 458 5.387444 CGAGTACCGCAATTTATTCAGATCG 60.387 44.000 0.00 0.00 0.00 3.69
458 459 5.462398 ACGAGTACCGCAATTTATTCAGATC 59.538 40.000 0.00 0.00 43.32 2.75
459 460 5.357257 ACGAGTACCGCAATTTATTCAGAT 58.643 37.500 0.00 0.00 43.32 2.90
460 461 4.751060 ACGAGTACCGCAATTTATTCAGA 58.249 39.130 0.00 0.00 43.32 3.27
461 462 5.975344 TCTACGAGTACCGCAATTTATTCAG 59.025 40.000 0.00 0.00 43.32 3.02
462 463 5.893687 TCTACGAGTACCGCAATTTATTCA 58.106 37.500 0.00 0.00 43.32 2.57
463 464 6.074463 CCTTCTACGAGTACCGCAATTTATTC 60.074 42.308 0.00 0.00 43.32 1.75
464 465 5.751990 CCTTCTACGAGTACCGCAATTTATT 59.248 40.000 0.00 0.00 43.32 1.40
465 466 5.068198 TCCTTCTACGAGTACCGCAATTTAT 59.932 40.000 0.00 0.00 43.32 1.40
466 467 4.398988 TCCTTCTACGAGTACCGCAATTTA 59.601 41.667 0.00 0.00 43.32 1.40
467 468 3.194116 TCCTTCTACGAGTACCGCAATTT 59.806 43.478 0.00 0.00 43.32 1.82
468 469 2.756760 TCCTTCTACGAGTACCGCAATT 59.243 45.455 0.00 0.00 43.32 2.32
469 470 2.358267 CTCCTTCTACGAGTACCGCAAT 59.642 50.000 0.00 0.00 43.32 3.56
470 471 1.741706 CTCCTTCTACGAGTACCGCAA 59.258 52.381 0.00 0.00 43.32 4.85
471 472 1.339438 ACTCCTTCTACGAGTACCGCA 60.339 52.381 0.00 0.00 43.32 5.69
472 473 1.377536 ACTCCTTCTACGAGTACCGC 58.622 55.000 0.00 0.00 43.32 5.68
473 474 6.648310 TGATATTACTCCTTCTACGAGTACCG 59.352 42.308 0.00 2.71 41.41 4.02
474 475 7.976135 TGATATTACTCCTTCTACGAGTACC 57.024 40.000 0.00 0.00 41.41 3.34
506 507 9.390795 CGACGCATTGTAGTACTACTAAAATAT 57.609 33.333 28.56 12.48 36.69 1.28
507 508 7.376866 GCGACGCATTGTAGTACTACTAAAATA 59.623 37.037 28.56 9.13 36.69 1.40
508 509 6.197842 GCGACGCATTGTAGTACTACTAAAAT 59.802 38.462 28.56 18.92 38.76 1.82
509 510 5.512788 GCGACGCATTGTAGTACTACTAAAA 59.487 40.000 28.56 17.69 32.85 1.52
510 511 5.030295 GCGACGCATTGTAGTACTACTAAA 58.970 41.667 28.56 18.32 37.00 1.85
511 512 4.496341 GGCGACGCATTGTAGTACTACTAA 60.496 45.833 28.56 21.45 37.00 2.24
512 513 3.002656 GGCGACGCATTGTAGTACTACTA 59.997 47.826 28.56 23.25 37.00 1.82
513 514 2.223433 GGCGACGCATTGTAGTACTACT 60.223 50.000 28.56 11.51 37.00 2.57
514 515 2.114825 GGCGACGCATTGTAGTACTAC 58.885 52.381 23.58 23.58 36.63 2.73
515 516 1.066002 GGGCGACGCATTGTAGTACTA 59.934 52.381 23.09 0.00 0.00 1.82
516 517 0.179119 GGGCGACGCATTGTAGTACT 60.179 55.000 23.09 0.00 0.00 2.73
517 518 0.179119 AGGGCGACGCATTGTAGTAC 60.179 55.000 23.09 0.00 0.00 2.73
518 519 1.391577 TAGGGCGACGCATTGTAGTA 58.608 50.000 23.09 0.00 0.00 1.82
519 520 0.750850 ATAGGGCGACGCATTGTAGT 59.249 50.000 23.09 0.00 0.00 2.73
520 521 1.792949 GAATAGGGCGACGCATTGTAG 59.207 52.381 23.09 0.00 0.00 2.74
521 522 1.411246 AGAATAGGGCGACGCATTGTA 59.589 47.619 23.09 7.13 0.00 2.41
522 523 0.178068 AGAATAGGGCGACGCATTGT 59.822 50.000 23.09 8.63 0.00 2.71
523 524 0.861837 GAGAATAGGGCGACGCATTG 59.138 55.000 23.09 0.00 0.00 2.82
524 525 0.249911 GGAGAATAGGGCGACGCATT 60.250 55.000 23.09 12.83 0.00 3.56
525 526 1.367840 GGAGAATAGGGCGACGCAT 59.632 57.895 23.09 12.10 0.00 4.73
526 527 2.812499 GGAGAATAGGGCGACGCA 59.188 61.111 23.09 0.56 0.00 5.24
527 528 2.354773 CGGAGAATAGGGCGACGC 60.355 66.667 12.43 12.43 0.00 5.19
528 529 1.008767 GACGGAGAATAGGGCGACG 60.009 63.158 0.00 0.00 0.00 5.12
529 530 1.108132 AGGACGGAGAATAGGGCGAC 61.108 60.000 0.00 0.00 0.00 5.19
530 531 0.822532 GAGGACGGAGAATAGGGCGA 60.823 60.000 0.00 0.00 0.00 5.54
531 532 1.107538 TGAGGACGGAGAATAGGGCG 61.108 60.000 0.00 0.00 0.00 6.13
532 533 0.676736 CTGAGGACGGAGAATAGGGC 59.323 60.000 0.00 0.00 0.00 5.19
544 545 1.071857 AGACGGGGAAAAACTGAGGAC 59.928 52.381 0.00 0.00 0.00 3.85
559 560 7.226720 AGGCAACATATATAAAAGACAAGACGG 59.773 37.037 0.00 0.00 41.41 4.79
561 562 9.937175 GAAGGCAACATATATAAAAGACAAGAC 57.063 33.333 0.00 0.00 41.41 3.01
562 563 9.905713 AGAAGGCAACATATATAAAAGACAAGA 57.094 29.630 0.00 0.00 41.41 3.02
563 564 9.941664 CAGAAGGCAACATATATAAAAGACAAG 57.058 33.333 0.00 0.00 41.41 3.16
564 565 9.679661 TCAGAAGGCAACATATATAAAAGACAA 57.320 29.630 0.00 0.00 41.41 3.18
680 684 8.403236 GGTATAATTGGAATGTCCTTTGTACAC 58.597 37.037 0.00 0.00 37.46 2.90
689 693 5.998363 GGAGACAGGTATAATTGGAATGTCC 59.002 44.000 0.00 0.00 36.99 4.02
694 698 8.618240 TCTAAAGGAGACAGGTATAATTGGAA 57.382 34.615 0.00 0.00 0.00 3.53
705 709 3.196685 CCAGAGGTTCTAAAGGAGACAGG 59.803 52.174 0.00 0.00 32.31 4.00
709 713 2.188817 GCCCAGAGGTTCTAAAGGAGA 58.811 52.381 0.00 0.00 34.57 3.71
710 714 2.192263 AGCCCAGAGGTTCTAAAGGAG 58.808 52.381 0.00 0.00 34.57 3.69
711 715 2.344093 AGCCCAGAGGTTCTAAAGGA 57.656 50.000 0.00 0.00 34.57 3.36
713 717 3.711704 TGGATAGCCCAGAGGTTCTAAAG 59.288 47.826 0.00 0.00 40.82 1.85
714 718 3.731431 TGGATAGCCCAGAGGTTCTAAA 58.269 45.455 0.00 0.00 40.82 1.85
773 782 8.617206 GCTTATGCATAGCTTTTGTAGCAACAG 61.617 40.741 14.80 3.16 45.07 3.16
798 811 5.819901 ACTCTTCTCTAATATTGGCAAGTGC 59.180 40.000 5.96 0.00 41.14 4.40
833 846 3.511699 GCAGCTGCCTATTTTTGTTACC 58.488 45.455 28.76 0.00 34.31 2.85
853 866 3.567164 CACACTTGAATCTATCCATGGGC 59.433 47.826 13.02 0.00 0.00 5.36
886 899 1.152440 TGGCTAGCTAGGAGGCCTC 60.152 63.158 25.59 25.59 44.36 4.70
887 900 1.458588 GTGGCTAGCTAGGAGGCCT 60.459 63.158 22.10 3.86 44.36 5.19
888 901 2.512355 GGTGGCTAGCTAGGAGGCC 61.512 68.421 22.10 17.52 44.31 5.19
889 902 1.762460 TGGTGGCTAGCTAGGAGGC 60.762 63.158 22.10 12.06 39.84 4.70
890 903 1.403687 GGTGGTGGCTAGCTAGGAGG 61.404 65.000 22.10 0.00 0.00 4.30
891 904 0.687757 TGGTGGTGGCTAGCTAGGAG 60.688 60.000 22.10 0.00 0.00 3.69
892 905 0.031111 ATGGTGGTGGCTAGCTAGGA 60.031 55.000 22.10 0.00 0.00 2.94
893 906 0.839946 AATGGTGGTGGCTAGCTAGG 59.160 55.000 22.10 4.48 0.00 3.02
894 907 1.959042 CAATGGTGGTGGCTAGCTAG 58.041 55.000 16.84 16.84 0.00 3.42
895 908 0.107214 GCAATGGTGGTGGCTAGCTA 60.107 55.000 15.72 5.44 0.00 3.32
896 909 1.379044 GCAATGGTGGTGGCTAGCT 60.379 57.895 15.72 0.00 0.00 3.32
897 910 1.250154 TTGCAATGGTGGTGGCTAGC 61.250 55.000 6.04 6.04 0.00 3.42
898 911 1.406539 GATTGCAATGGTGGTGGCTAG 59.593 52.381 18.59 0.00 0.00 3.42
899 912 1.005805 AGATTGCAATGGTGGTGGCTA 59.994 47.619 18.59 0.00 0.00 3.93
900 913 0.251922 AGATTGCAATGGTGGTGGCT 60.252 50.000 18.59 1.61 0.00 4.75
901 914 0.609662 AAGATTGCAATGGTGGTGGC 59.390 50.000 18.59 0.00 0.00 5.01
958 1016 4.402056 TCCTCAGTTGATCCGGTTAATC 57.598 45.455 0.00 0.00 0.00 1.75
972 1030 0.543174 ACGGCTCTTCCTTCCTCAGT 60.543 55.000 0.00 0.00 0.00 3.41
975 1033 1.139947 CGACGGCTCTTCCTTCCTC 59.860 63.158 0.00 0.00 29.74 3.71
982 1040 2.277628 CGCTCTCGACGGCTCTTC 60.278 66.667 0.00 0.00 38.10 2.87
1077 1135 3.115892 GCGCCGACGATGTGGAAA 61.116 61.111 0.00 0.00 43.93 3.13
1203 1261 1.202440 TGAACAAGGAGCACGTAACGT 60.202 47.619 0.00 0.00 42.36 3.99
1204 1262 1.493772 TGAACAAGGAGCACGTAACG 58.506 50.000 0.00 0.00 0.00 3.18
1232 1299 0.827368 CGAGGAGAAGAAGAAGGGGG 59.173 60.000 0.00 0.00 0.00 5.40
1236 1303 0.804156 GCGGCGAGGAGAAGAAGAAG 60.804 60.000 12.98 0.00 0.00 2.85
1237 1304 1.215647 GCGGCGAGGAGAAGAAGAA 59.784 57.895 12.98 0.00 0.00 2.52
1238 1305 2.711922 GGCGGCGAGGAGAAGAAGA 61.712 63.158 12.98 0.00 0.00 2.87
1239 1306 2.202810 GGCGGCGAGGAGAAGAAG 60.203 66.667 12.98 0.00 0.00 2.85
1240 1307 4.129737 CGGCGGCGAGGAGAAGAA 62.130 66.667 29.19 0.00 0.00 2.52
1598 1668 4.671569 CCCCAGCTCTATCGGCGC 62.672 72.222 0.00 0.00 34.52 6.53
1601 1671 1.910772 CCTCCCCCAGCTCTATCGG 60.911 68.421 0.00 0.00 0.00 4.18
1605 1675 4.860881 CGGCCTCCCCCAGCTCTA 62.861 72.222 0.00 0.00 0.00 2.43
1745 1827 2.024871 CTCCATCGACGACGGCTC 59.975 66.667 4.78 0.00 40.21 4.70
1914 1997 1.535028 TGTACTTGTGCGGCAAAGATG 59.465 47.619 22.64 9.17 36.53 2.90
1917 2000 2.704725 ATTGTACTTGTGCGGCAAAG 57.295 45.000 3.23 13.02 36.53 2.77
1980 2063 4.142643 GCGTAAATACATCGACCCCAAAAA 60.143 41.667 0.00 0.00 0.00 1.94
1981 2064 3.374678 GCGTAAATACATCGACCCCAAAA 59.625 43.478 0.00 0.00 0.00 2.44
1982 2065 2.937799 GCGTAAATACATCGACCCCAAA 59.062 45.455 0.00 0.00 0.00 3.28
1983 2066 2.168936 AGCGTAAATACATCGACCCCAA 59.831 45.455 0.00 0.00 0.00 4.12
1984 2067 1.758280 AGCGTAAATACATCGACCCCA 59.242 47.619 0.00 0.00 0.00 4.96
1985 2068 2.223876 TGAGCGTAAATACATCGACCCC 60.224 50.000 0.00 0.00 0.00 4.95
1986 2069 3.088194 TGAGCGTAAATACATCGACCC 57.912 47.619 0.00 0.00 0.00 4.46
1987 2070 5.458891 AGTATGAGCGTAAATACATCGACC 58.541 41.667 0.00 0.00 32.69 4.79
1988 2071 7.201249 GCTTAGTATGAGCGTAAATACATCGAC 60.201 40.741 0.00 0.00 32.69 4.20
1989 2072 6.800408 GCTTAGTATGAGCGTAAATACATCGA 59.200 38.462 0.00 0.00 32.69 3.59
1990 2073 6.033619 GGCTTAGTATGAGCGTAAATACATCG 59.966 42.308 0.00 0.00 41.03 3.84
1991 2074 6.866770 TGGCTTAGTATGAGCGTAAATACATC 59.133 38.462 0.00 0.00 41.03 3.06
1992 2075 6.645415 GTGGCTTAGTATGAGCGTAAATACAT 59.355 38.462 6.38 0.00 41.03 2.29
1993 2076 5.981315 GTGGCTTAGTATGAGCGTAAATACA 59.019 40.000 6.38 0.00 41.03 2.29
1994 2077 5.116680 CGTGGCTTAGTATGAGCGTAAATAC 59.883 44.000 0.00 0.00 41.03 1.89
1995 2078 5.217393 CGTGGCTTAGTATGAGCGTAAATA 58.783 41.667 0.00 0.00 41.03 1.40
1996 2079 4.049186 CGTGGCTTAGTATGAGCGTAAAT 58.951 43.478 0.00 0.00 41.03 1.40
1997 2080 3.441163 CGTGGCTTAGTATGAGCGTAAA 58.559 45.455 0.00 0.00 41.03 2.01
1998 2081 2.223641 CCGTGGCTTAGTATGAGCGTAA 60.224 50.000 0.00 0.00 41.03 3.18
1999 2082 1.335810 CCGTGGCTTAGTATGAGCGTA 59.664 52.381 0.00 0.00 41.03 4.42
2049 2136 4.003519 GTACGTACGTACCTACACCAAG 57.996 50.000 36.94 9.15 43.60 3.61
2067 2154 1.274596 CACGACCGCCTTGTATGTAC 58.725 55.000 0.00 0.00 0.00 2.90
2068 2155 0.889994 ACACGACCGCCTTGTATGTA 59.110 50.000 0.00 0.00 0.00 2.29
2069 2156 0.889994 TACACGACCGCCTTGTATGT 59.110 50.000 0.00 0.00 0.00 2.29
2070 2157 1.274596 GTACACGACCGCCTTGTATG 58.725 55.000 0.00 0.00 33.02 2.39
2113 2204 4.155280 ACGTACTGTGGCCATATTTCAAAC 59.845 41.667 9.72 2.16 0.00 2.93
2117 2208 5.294356 TGATACGTACTGTGGCCATATTTC 58.706 41.667 9.72 0.00 0.00 2.17
2146 2237 6.874288 AGTAGTATAGGTGATACGGTGAAC 57.126 41.667 0.00 0.00 44.58 3.18
2174 2266 6.959639 ACTGTGGAAATTAAACACACATCT 57.040 33.333 5.87 0.00 40.76 2.90
2175 2267 7.425606 AGAACTGTGGAAATTAAACACACATC 58.574 34.615 5.87 7.17 40.76 3.06
2176 2268 7.346751 AGAACTGTGGAAATTAAACACACAT 57.653 32.000 5.87 0.00 40.76 3.21
2179 2271 7.397892 TCAAGAACTGTGGAAATTAAACACA 57.602 32.000 8.78 8.78 42.29 3.72
2180 2272 6.918022 CCTCAAGAACTGTGGAAATTAAACAC 59.082 38.462 0.00 0.00 40.58 3.32
2181 2273 6.605594 ACCTCAAGAACTGTGGAAATTAAACA 59.394 34.615 0.12 0.00 40.58 2.83
2182 2274 7.013369 AGACCTCAAGAACTGTGGAAATTAAAC 59.987 37.037 0.12 0.00 40.58 2.01
2183 2275 7.013274 CAGACCTCAAGAACTGTGGAAATTAAA 59.987 37.037 0.12 0.00 40.58 1.52
2184 2276 6.486657 CAGACCTCAAGAACTGTGGAAATTAA 59.513 38.462 0.12 0.00 40.58 1.40
2185 2277 5.997746 CAGACCTCAAGAACTGTGGAAATTA 59.002 40.000 0.12 0.00 40.58 1.40
2186 2278 4.823989 CAGACCTCAAGAACTGTGGAAATT 59.176 41.667 0.12 0.00 40.58 1.82
2187 2279 4.141390 ACAGACCTCAAGAACTGTGGAAAT 60.141 41.667 0.00 0.00 40.58 2.17
2196 2288 5.444122 CGAAAATCAACAGACCTCAAGAAC 58.556 41.667 0.00 0.00 0.00 3.01
2295 2389 4.804139 TCTTTTTCTCGTTGTGACACTCTC 59.196 41.667 7.20 0.00 0.00 3.20
2301 2395 6.108097 AGAACTTCTTTTTCTCGTTGTGAC 57.892 37.500 0.00 0.00 0.00 3.67
2330 2424 2.680339 CAATCTCGGCCTCTCTTTTTCC 59.320 50.000 0.00 0.00 0.00 3.13
2336 2431 0.835941 ATTGCAATCTCGGCCTCTCT 59.164 50.000 5.99 0.00 0.00 3.10
2337 2432 1.202627 AGATTGCAATCTCGGCCTCTC 60.203 52.381 31.78 8.56 41.82 3.20
2358 2453 4.573607 ACACTTTTCACGGGAACTCTTTAC 59.426 41.667 0.00 0.00 31.35 2.01
2390 2627 2.427812 GTGGACACTTTTCCCGGAAAAA 59.572 45.455 22.74 0.00 40.34 1.94
2394 2631 2.535224 AGTGGACACTTTTCCCGGA 58.465 52.632 0.73 0.00 38.83 5.14
2403 2640 4.383552 GCCATAGATCAAGAAGTGGACACT 60.384 45.833 0.00 0.00 44.94 3.55
2404 2641 3.873952 GCCATAGATCAAGAAGTGGACAC 59.126 47.826 0.00 0.00 0.00 3.67
2405 2642 3.118261 GGCCATAGATCAAGAAGTGGACA 60.118 47.826 0.00 0.00 34.84 4.02
2406 2643 3.471680 GGCCATAGATCAAGAAGTGGAC 58.528 50.000 0.00 0.00 0.00 4.02
2407 2644 2.103094 CGGCCATAGATCAAGAAGTGGA 59.897 50.000 2.24 0.00 0.00 4.02
2414 2651 3.949842 TCATCTCGGCCATAGATCAAG 57.050 47.619 13.45 5.01 31.22 3.02
2426 2663 6.201806 GTGATAGATTCAGGTTTTCATCTCGG 59.798 42.308 0.00 0.00 34.17 4.63
2444 2681 4.687494 GCAGGAGGTAGTGAGAGTGATAGA 60.687 50.000 0.00 0.00 0.00 1.98
2445 2682 3.568007 GCAGGAGGTAGTGAGAGTGATAG 59.432 52.174 0.00 0.00 0.00 2.08
2447 2684 2.383855 GCAGGAGGTAGTGAGAGTGAT 58.616 52.381 0.00 0.00 0.00 3.06
2448 2685 1.617263 GGCAGGAGGTAGTGAGAGTGA 60.617 57.143 0.00 0.00 0.00 3.41
2449 2686 0.820871 GGCAGGAGGTAGTGAGAGTG 59.179 60.000 0.00 0.00 0.00 3.51
2450 2687 0.707616 AGGCAGGAGGTAGTGAGAGT 59.292 55.000 0.00 0.00 0.00 3.24
2451 2688 2.303175 GTAGGCAGGAGGTAGTGAGAG 58.697 57.143 0.00 0.00 0.00 3.20
2453 2690 1.404843 GGTAGGCAGGAGGTAGTGAG 58.595 60.000 0.00 0.00 0.00 3.51
2454 2691 0.032416 GGGTAGGCAGGAGGTAGTGA 60.032 60.000 0.00 0.00 0.00 3.41
2459 2697 4.715130 TGCGGGTAGGCAGGAGGT 62.715 66.667 0.00 0.00 38.17 3.85
2468 2706 4.455877 AGAAGATTTTCACTTTGCGGGTAG 59.544 41.667 0.00 0.00 35.70 3.18
2469 2707 4.394729 AGAAGATTTTCACTTTGCGGGTA 58.605 39.130 0.00 0.00 35.70 3.69
2495 2733 9.787435 TCCAAACCCATCAAACATATATAGTAC 57.213 33.333 0.00 0.00 0.00 2.73
2497 2735 9.707957 TTTCCAAACCCATCAAACATATATAGT 57.292 29.630 0.00 0.00 0.00 2.12
2500 2738 9.045745 AGTTTTCCAAACCCATCAAACATATAT 57.954 29.630 0.00 0.00 0.00 0.86
2501 2739 8.429237 AGTTTTCCAAACCCATCAAACATATA 57.571 30.769 0.00 0.00 0.00 0.86
2535 2773 7.793927 TCGGTGCAATTAATGTATGTCATTA 57.206 32.000 0.00 0.00 43.93 1.90
2537 2775 6.262944 ACATCGGTGCAATTAATGTATGTCAT 59.737 34.615 0.00 0.00 38.57 3.06
2540 2778 5.277297 CGACATCGGTGCAATTAATGTATGT 60.277 40.000 0.00 0.00 35.37 2.29
2558 2797 6.176975 TCATTTTTATGGTGTGACGACATC 57.823 37.500 0.00 0.00 33.63 3.06
2563 2802 5.633182 CCCTTTTCATTTTTATGGTGTGACG 59.367 40.000 0.00 0.00 0.00 4.35
2581 2820 3.662759 TCAGTCAAAGACACCCCTTTT 57.337 42.857 0.00 0.00 34.41 2.27
2585 2824 5.125578 GGAATATTTCAGTCAAAGACACCCC 59.874 44.000 0.00 0.00 34.60 4.95
2610 2849 3.965347 ACTATTATGTGCGGTAGGACCTT 59.035 43.478 0.00 0.00 37.97 3.50
2627 2866 9.143631 GAAGTGATTTGCTTTAATTGCACTATT 57.856 29.630 0.00 0.00 40.40 1.73
2628 2867 8.306038 TGAAGTGATTTGCTTTAATTGCACTAT 58.694 29.630 0.00 1.82 40.40 2.12
2631 2870 6.768029 TGAAGTGATTTGCTTTAATTGCAC 57.232 33.333 3.56 0.00 40.40 4.57
2634 2873 7.095523 CCAGGTTGAAGTGATTTGCTTTAATTG 60.096 37.037 0.00 0.00 0.00 2.32
2642 2881 1.963515 ACCCAGGTTGAAGTGATTTGC 59.036 47.619 0.00 0.00 0.00 3.68
2643 2882 4.670896 AAACCCAGGTTGAAGTGATTTG 57.329 40.909 2.09 0.00 38.47 2.32
2657 2896 3.251004 GCTGACAGAAGTACAAAACCCAG 59.749 47.826 6.65 0.00 0.00 4.45
2668 2907 3.467803 GTGTAAGGTTGCTGACAGAAGT 58.532 45.455 6.65 0.00 0.00 3.01
2669 2908 2.808543 GGTGTAAGGTTGCTGACAGAAG 59.191 50.000 6.65 0.00 0.00 2.85
2670 2909 2.438021 AGGTGTAAGGTTGCTGACAGAA 59.562 45.455 6.65 0.00 0.00 3.02
2671 2910 2.047061 AGGTGTAAGGTTGCTGACAGA 58.953 47.619 6.65 0.00 0.00 3.41
2672 2911 2.146342 CAGGTGTAAGGTTGCTGACAG 58.854 52.381 0.00 0.00 0.00 3.51
2673 2912 1.202758 CCAGGTGTAAGGTTGCTGACA 60.203 52.381 0.00 0.00 0.00 3.58
2674 2913 1.523758 CCAGGTGTAAGGTTGCTGAC 58.476 55.000 0.00 0.00 0.00 3.51
2675 2914 0.250727 GCCAGGTGTAAGGTTGCTGA 60.251 55.000 0.00 0.00 0.00 4.26
2676 2915 0.250901 AGCCAGGTGTAAGGTTGCTG 60.251 55.000 0.00 0.00 0.00 4.41
2677 2916 0.478507 AAGCCAGGTGTAAGGTTGCT 59.521 50.000 0.00 0.00 0.00 3.91
2678 2917 0.881796 GAAGCCAGGTGTAAGGTTGC 59.118 55.000 0.00 0.00 0.00 4.17
2679 2918 2.154462 CAGAAGCCAGGTGTAAGGTTG 58.846 52.381 0.00 0.00 0.00 3.77
2681 2920 0.036875 GCAGAAGCCAGGTGTAAGGT 59.963 55.000 0.00 0.00 33.58 3.50
2682 2921 1.021390 CGCAGAAGCCAGGTGTAAGG 61.021 60.000 0.00 0.00 37.52 2.69
2683 2922 1.639298 GCGCAGAAGCCAGGTGTAAG 61.639 60.000 0.30 0.00 37.52 2.34
2684 2923 1.671054 GCGCAGAAGCCAGGTGTAA 60.671 57.895 0.30 0.00 37.52 2.41
2685 2924 2.047274 GCGCAGAAGCCAGGTGTA 60.047 61.111 0.30 0.00 37.52 2.90
2686 2925 3.482232 AAGCGCAGAAGCCAGGTGT 62.482 57.895 11.47 0.00 37.52 4.16
2687 2926 2.670934 AAGCGCAGAAGCCAGGTG 60.671 61.111 11.47 0.00 37.52 4.00
2690 2929 3.036783 GCTCAAGCGCAGAAGCCAG 62.037 63.158 11.47 0.00 37.52 4.85
2724 2963 1.804601 ACCGAACCATCCGAGAAAAC 58.195 50.000 0.00 0.00 0.00 2.43
2725 2964 3.196039 TGATACCGAACCATCCGAGAAAA 59.804 43.478 0.00 0.00 0.00 2.29
2726 2965 2.761767 TGATACCGAACCATCCGAGAAA 59.238 45.455 0.00 0.00 0.00 2.52
2729 2968 1.407618 TGTGATACCGAACCATCCGAG 59.592 52.381 0.00 0.00 0.00 4.63
2730 2969 1.476477 TGTGATACCGAACCATCCGA 58.524 50.000 0.00 0.00 0.00 4.55
2731 2970 2.526304 ATGTGATACCGAACCATCCG 57.474 50.000 0.00 0.00 0.00 4.18
2732 2971 2.800544 CGAATGTGATACCGAACCATCC 59.199 50.000 0.00 0.00 0.00 3.51
2734 2973 2.484770 CCCGAATGTGATACCGAACCAT 60.485 50.000 0.00 0.00 0.00 3.55
2736 2975 1.578583 CCCGAATGTGATACCGAACC 58.421 55.000 0.00 0.00 0.00 3.62
2741 2989 1.021968 GTTGGCCCGAATGTGATACC 58.978 55.000 0.00 0.00 0.00 2.73
2745 2993 1.403814 TTTTGTTGGCCCGAATGTGA 58.596 45.000 0.00 0.00 0.00 3.58
2769 3017 0.962855 GAGGAGAGGGGCTTTGCAAC 60.963 60.000 0.00 0.00 0.00 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.