Multiple sequence alignment - TraesCS1B01G437600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G437600 chr1B 100.000 5166 0 0 1 5166 660111945 660106780 0.000000e+00 9540.0
1 TraesCS1B01G437600 chr1D 93.106 2321 96 25 2153 4429 474926483 474924183 0.000000e+00 3341.0
2 TraesCS1B01G437600 chr1D 87.368 1322 107 26 769 2062 474927776 474926487 0.000000e+00 1461.0
3 TraesCS1B01G437600 chr1D 92.727 440 25 4 1 440 474940890 474940458 3.400000e-176 628.0
4 TraesCS1B01G437600 chr1D 90.373 322 27 2 438 757 474933774 474933455 2.220000e-113 420.0
5 TraesCS1B01G437600 chr1D 83.000 400 35 21 4772 5166 474923473 474923102 1.070000e-86 331.0
6 TraesCS1B01G437600 chr1A 93.117 1787 85 19 2676 4436 570450627 570448853 0.000000e+00 2584.0
7 TraesCS1B01G437600 chr1A 87.563 989 88 19 757 1718 570453461 570452481 0.000000e+00 1112.0
8 TraesCS1B01G437600 chr1A 88.441 943 79 19 1613 2538 570451697 570450768 0.000000e+00 1110.0
9 TraesCS1B01G437600 chr1A 90.162 681 44 9 1717 2393 570452391 570451730 0.000000e+00 865.0
10 TraesCS1B01G437600 chr1A 90.548 529 42 6 1 528 570454597 570454076 0.000000e+00 693.0
11 TraesCS1B01G437600 chr1A 84.921 252 26 7 4427 4678 570448825 570448586 1.440000e-60 244.0
12 TraesCS1B01G437600 chr1A 80.973 226 16 17 4964 5166 570448546 570448325 2.490000e-33 154.0
13 TraesCS1B01G437600 chr1A 84.459 148 21 2 4814 4961 465505095 465505240 1.500000e-30 145.0
14 TraesCS1B01G437600 chr1A 97.674 43 1 0 4772 4814 570448587 570448545 2.000000e-09 75.0
15 TraesCS1B01G437600 chr1A 96.875 32 1 0 7 38 504087060 504087029 3.000000e-03 54.7
16 TraesCS1B01G437600 chr7A 86.986 146 17 2 4812 4957 41966359 41966502 4.140000e-36 163.0
17 TraesCS1B01G437600 chr7D 84.431 167 21 4 4809 4973 145917732 145917569 5.350000e-35 159.0
18 TraesCS1B01G437600 chr7D 83.234 167 23 4 4809 4973 140920117 140920280 1.160000e-31 148.0
19 TraesCS1B01G437600 chr4B 86.000 150 18 3 4812 4961 510827659 510827805 1.930000e-34 158.0
20 TraesCS1B01G437600 chr2D 85.906 149 19 2 4813 4961 617101213 617101067 1.930000e-34 158.0
21 TraesCS1B01G437600 chr2A 85.906 149 19 2 4813 4961 747272327 747272181 1.930000e-34 158.0
22 TraesCS1B01G437600 chr6B 85.517 145 19 2 4813 4957 536829705 536829847 3.220000e-32 150.0
23 TraesCS1B01G437600 chr4D 85.235 149 19 2 4813 4961 41217680 41217535 3.220000e-32 150.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G437600 chr1B 660106780 660111945 5165 True 9540.000 9540 100.000000 1 5166 1 chr1B.!!$R1 5165
1 TraesCS1B01G437600 chr1D 474923102 474927776 4674 True 1711.000 3341 87.824667 769 5166 3 chr1D.!!$R3 4397
2 TraesCS1B01G437600 chr1A 570448325 570454597 6272 True 854.625 2584 89.174875 1 5166 8 chr1A.!!$R2 5165

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
530 531 0.032515 TACTTGGGGAGATGCCTCGA 60.033 55.0 0.00 0.0 41.55 4.04 F
556 557 0.036010 CCGGGAAGACTTGTGCTGAT 60.036 55.0 0.00 0.0 0.00 2.90 F
591 592 0.036294 AGCTCCTTTAGTTCCCGTGC 60.036 55.0 0.00 0.0 0.00 5.34 F
691 692 0.107848 AATAGGGCTGGTGTGTACGC 60.108 55.0 0.00 0.0 0.00 4.42 F
1749 2264 0.035317 TGCTGTGGACCTGTAAGCAG 59.965 55.0 6.81 0.0 38.88 4.24 F
1751 2266 0.322975 CTGTGGACCTGTAAGCAGCT 59.677 55.0 0.00 0.0 41.26 4.24 F
2346 3698 0.606401 ACCAGGACAAGGATGTTGCG 60.606 55.0 0.00 0.0 40.74 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1414 1819 0.109319 CAAAAGCGAACGGGAATGGG 60.109 55.000 0.00 0.00 0.00 4.00 R
1426 1831 0.161024 GACGAACGGAGACAAAAGCG 59.839 55.000 0.00 0.00 0.00 4.68 R
1668 2091 0.403271 AGAAGACTGGGCATGCTGTT 59.597 50.000 18.92 1.75 0.00 3.16 R
1854 2385 0.532862 AACGGTTCACTGTGCTCTGG 60.533 55.000 2.12 0.00 35.26 3.86 R
2693 4078 1.262417 TCTGTTCCGCATACCAGTGA 58.738 50.000 0.00 0.00 0.00 3.41 R
3311 4712 3.825908 ACCACCAACCTGAATATGGTT 57.174 42.857 0.00 0.00 44.92 3.67 R
4310 5712 0.110509 GCGCACATAAGGCATGATCG 60.111 55.000 0.30 0.00 38.10 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 7.283807 TGATGTGAATAGCTTGCATGTTAAGAT 59.716 33.333 13.75 10.66 0.00 2.40
47 48 7.307632 GCTTGCATGTTAAGATATCAGGTAGTG 60.308 40.741 13.75 0.00 0.00 2.74
114 115 6.696411 AGTGATTCTCTTGGAATATCCGATC 58.304 40.000 0.00 0.00 43.90 3.69
127 128 7.990314 TGGAATATCCGATCTAAACAACAATGA 59.010 33.333 0.00 0.00 40.17 2.57
132 133 6.898041 TCCGATCTAAACAACAATGAAACTG 58.102 36.000 0.00 0.00 0.00 3.16
174 175 4.832266 TCAATGGTGTACCTCAATTTGCTT 59.168 37.500 2.32 0.00 36.82 3.91
175 176 6.007076 TCAATGGTGTACCTCAATTTGCTTA 58.993 36.000 2.32 0.00 36.82 3.09
176 177 5.897377 ATGGTGTACCTCAATTTGCTTAC 57.103 39.130 2.32 0.00 36.82 2.34
177 178 4.980573 TGGTGTACCTCAATTTGCTTACT 58.019 39.130 2.32 0.00 36.82 2.24
178 179 6.116711 TGGTGTACCTCAATTTGCTTACTA 57.883 37.500 2.32 0.00 36.82 1.82
179 180 5.935789 TGGTGTACCTCAATTTGCTTACTAC 59.064 40.000 2.32 0.00 36.82 2.73
197 198 7.041984 GCTTACTACTATTTGTAATGTCTGGCC 60.042 40.741 0.00 0.00 0.00 5.36
199 200 7.670605 ACTACTATTTGTAATGTCTGGCCTA 57.329 36.000 3.32 0.00 0.00 3.93
210 211 1.128200 TCTGGCCTATTGGTATGCGT 58.872 50.000 3.32 0.00 35.27 5.24
212 213 0.817634 TGGCCTATTGGTATGCGTGC 60.818 55.000 3.32 0.00 35.27 5.34
218 219 1.597742 ATTGGTATGCGTGCTCATCC 58.402 50.000 0.00 0.00 0.00 3.51
273 274 2.501610 GAAGGCCGCCAGAGGTAG 59.498 66.667 13.15 0.00 0.00 3.18
280 281 0.827925 CCGCCAGAGGTAGCCATCTA 60.828 60.000 0.00 0.00 0.00 1.98
291 292 4.357918 GTAGCCATCTACCAATGTCCAT 57.642 45.455 0.00 0.00 39.36 3.41
303 304 2.428171 CAATGTCCATTGGGTGTGATCC 59.572 50.000 11.36 0.00 43.25 3.36
304 305 1.071434 TGTCCATTGGGTGTGATCCA 58.929 50.000 2.09 0.00 34.93 3.41
325 326 1.137675 GGGTTGTCTACGATGGTACCC 59.862 57.143 10.07 0.57 0.00 3.69
330 331 0.820891 TCTACGATGGTACCCGAGGC 60.821 60.000 16.23 0.00 0.00 4.70
385 386 2.687200 TGGTCTAGCCACCGCCAT 60.687 61.111 2.19 0.00 43.61 4.40
401 402 4.796231 ATCGCCGACCGCAGACAC 62.796 66.667 0.00 0.00 37.30 3.67
408 409 1.733399 GACCGCAGACACCGTTCTC 60.733 63.158 0.00 0.00 0.00 2.87
416 417 0.670854 GACACCGTTCTCCTCCTTGC 60.671 60.000 0.00 0.00 0.00 4.01
429 430 1.398390 CTCCTTGCAGGCATCGTTTAC 59.602 52.381 0.00 0.00 34.61 2.01
443 444 1.618447 TTTACCCTGCCCCTCTCCC 60.618 63.158 0.00 0.00 0.00 4.30
453 454 1.299976 CCCTCTCCCCCTTCAAACG 59.700 63.158 0.00 0.00 0.00 3.60
461 462 1.743394 CCCCCTTCAAACGATTGCTAC 59.257 52.381 0.00 0.00 36.45 3.58
469 470 4.501071 TCAAACGATTGCTACCTAGTTCC 58.499 43.478 0.00 0.00 36.45 3.62
479 480 2.589540 CTAGTTCCGCATGGCCCA 59.410 61.111 0.00 0.00 34.14 5.36
487 488 1.825191 CGCATGGCCCATTGCTAGT 60.825 57.895 17.24 0.00 40.92 2.57
499 500 0.667993 TTGCTAGTTGTGTGCCTTGC 59.332 50.000 0.00 0.00 0.00 4.01
500 501 1.207593 GCTAGTTGTGTGCCTTGCG 59.792 57.895 0.00 0.00 0.00 4.85
502 503 1.225855 CTAGTTGTGTGCCTTGCGAA 58.774 50.000 0.00 0.00 0.00 4.70
503 504 1.195448 CTAGTTGTGTGCCTTGCGAAG 59.805 52.381 0.00 0.00 0.00 3.79
512 513 2.668632 CTTGCGAAGGGTGGCCTA 59.331 61.111 3.32 0.00 0.00 3.93
528 529 0.761802 CCTACTTGGGGAGATGCCTC 59.238 60.000 0.00 0.00 37.80 4.70
529 530 0.390860 CTACTTGGGGAGATGCCTCG 59.609 60.000 0.00 0.00 41.55 4.63
530 531 0.032515 TACTTGGGGAGATGCCTCGA 60.033 55.000 0.00 0.00 41.55 4.04
531 532 1.445095 CTTGGGGAGATGCCTCGAG 59.555 63.158 5.13 5.13 42.36 4.04
547 548 2.120718 AGGCACTCCGGGAAGACT 59.879 61.111 0.00 0.00 37.47 3.24
548 549 1.536662 AGGCACTCCGGGAAGACTT 60.537 57.895 0.00 0.00 37.47 3.01
549 550 1.376037 GGCACTCCGGGAAGACTTG 60.376 63.158 0.00 0.00 0.00 3.16
551 552 0.951040 GCACTCCGGGAAGACTTGTG 60.951 60.000 0.00 2.78 0.00 3.33
552 553 0.951040 CACTCCGGGAAGACTTGTGC 60.951 60.000 0.00 0.00 0.00 4.57
555 556 1.118965 TCCGGGAAGACTTGTGCTGA 61.119 55.000 0.00 0.00 0.00 4.26
556 557 0.036010 CCGGGAAGACTTGTGCTGAT 60.036 55.000 0.00 0.00 0.00 2.90
557 558 1.611673 CCGGGAAGACTTGTGCTGATT 60.612 52.381 0.00 0.00 0.00 2.57
558 559 1.466167 CGGGAAGACTTGTGCTGATTG 59.534 52.381 0.00 0.00 0.00 2.67
559 560 1.200948 GGGAAGACTTGTGCTGATTGC 59.799 52.381 0.00 0.00 43.25 3.56
560 561 1.200948 GGAAGACTTGTGCTGATTGCC 59.799 52.381 0.00 0.00 42.00 4.52
561 562 1.881973 GAAGACTTGTGCTGATTGCCA 59.118 47.619 0.00 0.00 42.00 4.92
563 564 0.524862 GACTTGTGCTGATTGCCAGG 59.475 55.000 0.00 0.00 43.13 4.45
564 565 0.111061 ACTTGTGCTGATTGCCAGGA 59.889 50.000 0.00 0.00 43.13 3.86
567 568 3.169378 TGCTGATTGCCAGGACCA 58.831 55.556 0.00 0.00 43.13 4.02
568 569 1.459812 TGCTGATTGCCAGGACCAA 59.540 52.632 0.00 0.00 43.13 3.67
570 571 1.941999 GCTGATTGCCAGGACCAAGC 61.942 60.000 0.00 0.00 43.13 4.01
571 572 1.651240 CTGATTGCCAGGACCAAGCG 61.651 60.000 0.00 0.00 39.23 4.68
572 573 1.377202 GATTGCCAGGACCAAGCGA 60.377 57.895 0.00 0.00 0.00 4.93
573 574 1.372087 GATTGCCAGGACCAAGCGAG 61.372 60.000 0.00 0.00 0.00 5.03
574 575 4.704833 TGCCAGGACCAAGCGAGC 62.705 66.667 0.00 0.00 0.00 5.03
575 576 4.400961 GCCAGGACCAAGCGAGCT 62.401 66.667 0.00 0.00 0.00 4.09
576 577 2.125350 CCAGGACCAAGCGAGCTC 60.125 66.667 2.73 2.73 0.00 4.09
577 578 2.125350 CAGGACCAAGCGAGCTCC 60.125 66.667 8.47 0.68 0.00 4.70
578 579 2.284258 AGGACCAAGCGAGCTCCT 60.284 61.111 8.47 3.35 0.00 3.69
579 580 1.915769 AGGACCAAGCGAGCTCCTT 60.916 57.895 8.47 9.75 0.00 3.36
580 581 1.003233 GGACCAAGCGAGCTCCTTT 60.003 57.895 8.47 0.00 0.00 3.11
581 582 0.249398 GGACCAAGCGAGCTCCTTTA 59.751 55.000 8.47 0.00 0.00 1.85
582 583 1.646189 GACCAAGCGAGCTCCTTTAG 58.354 55.000 8.47 8.70 0.00 1.85
584 585 1.348036 ACCAAGCGAGCTCCTTTAGTT 59.652 47.619 8.47 0.00 0.00 2.24
586 587 2.003301 CAAGCGAGCTCCTTTAGTTCC 58.997 52.381 8.47 0.00 32.05 3.62
587 588 0.537653 AGCGAGCTCCTTTAGTTCCC 59.462 55.000 8.47 0.00 32.05 3.97
588 589 0.806492 GCGAGCTCCTTTAGTTCCCG 60.806 60.000 8.47 0.00 32.05 5.14
589 590 0.531200 CGAGCTCCTTTAGTTCCCGT 59.469 55.000 8.47 0.00 32.05 5.28
590 591 1.736032 CGAGCTCCTTTAGTTCCCGTG 60.736 57.143 8.47 0.00 32.05 4.94
591 592 0.036294 AGCTCCTTTAGTTCCCGTGC 60.036 55.000 0.00 0.00 0.00 5.34
592 593 0.036294 GCTCCTTTAGTTCCCGTGCT 60.036 55.000 0.00 0.00 0.00 4.40
593 594 1.610886 GCTCCTTTAGTTCCCGTGCTT 60.611 52.381 0.00 0.00 0.00 3.91
594 595 2.076863 CTCCTTTAGTTCCCGTGCTTG 58.923 52.381 0.00 0.00 0.00 4.01
595 596 0.521735 CCTTTAGTTCCCGTGCTTGC 59.478 55.000 0.00 0.00 0.00 4.01
597 598 1.880027 CTTTAGTTCCCGTGCTTGCTT 59.120 47.619 0.00 0.00 0.00 3.91
598 599 2.843401 TTAGTTCCCGTGCTTGCTTA 57.157 45.000 0.00 0.00 0.00 3.09
599 600 2.380084 TAGTTCCCGTGCTTGCTTAG 57.620 50.000 0.00 0.00 0.00 2.18
600 601 0.396811 AGTTCCCGTGCTTGCTTAGT 59.603 50.000 0.00 0.00 0.00 2.24
601 602 1.202770 AGTTCCCGTGCTTGCTTAGTT 60.203 47.619 0.00 0.00 0.00 2.24
602 603 1.607148 GTTCCCGTGCTTGCTTAGTTT 59.393 47.619 0.00 0.00 0.00 2.66
603 604 1.975660 TCCCGTGCTTGCTTAGTTTT 58.024 45.000 0.00 0.00 0.00 2.43
604 605 1.606668 TCCCGTGCTTGCTTAGTTTTG 59.393 47.619 0.00 0.00 0.00 2.44
609 610 3.908382 CGTGCTTGCTTAGTTTTGCTTAG 59.092 43.478 0.00 0.00 0.00 2.18
612 613 4.023193 TGCTTGCTTAGTTTTGCTTAGTCC 60.023 41.667 0.00 0.00 0.00 3.85
613 614 4.616143 GCTTGCTTAGTTTTGCTTAGTCCC 60.616 45.833 0.00 0.00 0.00 4.46
614 615 4.367039 TGCTTAGTTTTGCTTAGTCCCT 57.633 40.909 0.00 0.00 0.00 4.20
615 616 4.072131 TGCTTAGTTTTGCTTAGTCCCTG 58.928 43.478 0.00 0.00 0.00 4.45
616 617 4.072839 GCTTAGTTTTGCTTAGTCCCTGT 58.927 43.478 0.00 0.00 0.00 4.00
617 618 4.083271 GCTTAGTTTTGCTTAGTCCCTGTG 60.083 45.833 0.00 0.00 0.00 3.66
618 619 3.577805 AGTTTTGCTTAGTCCCTGTGT 57.422 42.857 0.00 0.00 0.00 3.72
619 620 3.898482 AGTTTTGCTTAGTCCCTGTGTT 58.102 40.909 0.00 0.00 0.00 3.32
620 621 4.278310 AGTTTTGCTTAGTCCCTGTGTTT 58.722 39.130 0.00 0.00 0.00 2.83
621 622 4.709886 AGTTTTGCTTAGTCCCTGTGTTTT 59.290 37.500 0.00 0.00 0.00 2.43
622 623 5.186992 AGTTTTGCTTAGTCCCTGTGTTTTT 59.813 36.000 0.00 0.00 0.00 1.94
623 624 4.647424 TTGCTTAGTCCCTGTGTTTTTG 57.353 40.909 0.00 0.00 0.00 2.44
624 625 2.955660 TGCTTAGTCCCTGTGTTTTTGG 59.044 45.455 0.00 0.00 0.00 3.28
625 626 2.296190 GCTTAGTCCCTGTGTTTTTGGG 59.704 50.000 0.00 0.00 42.20 4.12
626 627 3.562182 CTTAGTCCCTGTGTTTTTGGGT 58.438 45.455 0.00 0.00 41.58 4.51
628 629 1.037493 GTCCCTGTGTTTTTGGGTCC 58.963 55.000 0.00 0.00 41.58 4.46
630 631 1.118965 CCCTGTGTTTTTGGGTCCCC 61.119 60.000 5.13 0.00 36.32 4.81
640 641 4.176752 GGGTCCCCCGCTTAGCTG 62.177 72.222 1.76 0.00 32.13 4.24
642 643 2.669240 GTCCCCCGCTTAGCTGTT 59.331 61.111 1.76 0.00 0.00 3.16
643 644 1.002502 GTCCCCCGCTTAGCTGTTT 60.003 57.895 1.76 0.00 0.00 2.83
644 645 1.025113 GTCCCCCGCTTAGCTGTTTC 61.025 60.000 1.76 0.00 0.00 2.78
645 646 2.106683 CCCCCGCTTAGCTGTTTCG 61.107 63.158 1.76 0.00 0.00 3.46
646 647 1.079405 CCCCGCTTAGCTGTTTCGA 60.079 57.895 1.76 0.00 0.00 3.71
647 648 1.084370 CCCCGCTTAGCTGTTTCGAG 61.084 60.000 1.76 0.00 0.00 4.04
657 658 2.682836 GCTGTTTCGAGCTTCTCTTCT 58.317 47.619 0.00 0.00 35.95 2.85
658 659 3.839293 GCTGTTTCGAGCTTCTCTTCTA 58.161 45.455 0.00 0.00 35.95 2.10
659 660 4.429108 GCTGTTTCGAGCTTCTCTTCTAT 58.571 43.478 0.00 0.00 35.95 1.98
660 661 5.583495 GCTGTTTCGAGCTTCTCTTCTATA 58.417 41.667 0.00 0.00 35.95 1.31
662 663 5.583495 TGTTTCGAGCTTCTCTTCTATAGC 58.417 41.667 0.00 0.00 0.00 2.97
663 664 5.358442 TGTTTCGAGCTTCTCTTCTATAGCT 59.642 40.000 0.00 0.00 46.02 3.32
664 665 5.431420 TTCGAGCTTCTCTTCTATAGCTG 57.569 43.478 0.00 0.00 43.57 4.24
666 667 3.568007 CGAGCTTCTCTTCTATAGCTGGT 59.432 47.826 0.00 0.00 43.57 4.00
670 671 5.714806 AGCTTCTCTTCTATAGCTGGTATCC 59.285 44.000 2.12 0.00 42.07 2.59
671 672 5.105513 GCTTCTCTTCTATAGCTGGTATCCC 60.106 48.000 2.12 0.00 0.00 3.85
672 673 5.600669 TCTCTTCTATAGCTGGTATCCCA 57.399 43.478 2.12 0.00 38.87 4.37
673 674 5.965486 TCTCTTCTATAGCTGGTATCCCAA 58.035 41.667 2.12 0.00 41.27 4.12
674 675 6.565974 TCTCTTCTATAGCTGGTATCCCAAT 58.434 40.000 2.12 0.00 41.27 3.16
675 676 7.709601 TCTCTTCTATAGCTGGTATCCCAATA 58.290 38.462 2.12 0.00 41.27 1.90
676 677 7.836685 TCTCTTCTATAGCTGGTATCCCAATAG 59.163 40.741 2.12 0.00 41.27 1.73
689 690 2.038387 CCAATAGGGCTGGTGTGTAC 57.962 55.000 0.00 0.00 0.00 2.90
691 692 0.107848 AATAGGGCTGGTGTGTACGC 60.108 55.000 0.00 0.00 0.00 4.42
692 693 0.976073 ATAGGGCTGGTGTGTACGCT 60.976 55.000 8.10 0.00 0.00 5.07
693 694 0.323633 TAGGGCTGGTGTGTACGCTA 60.324 55.000 8.10 0.00 0.00 4.26
694 695 0.976073 AGGGCTGGTGTGTACGCTAT 60.976 55.000 8.10 0.00 0.00 2.97
697 698 1.134788 GGCTGGTGTGTACGCTATCTT 60.135 52.381 8.10 0.00 0.00 2.40
701 702 3.009026 TGGTGTGTACGCTATCTTCGTA 58.991 45.455 8.10 0.00 40.89 3.43
702 703 3.628942 TGGTGTGTACGCTATCTTCGTAT 59.371 43.478 8.10 0.00 43.14 3.06
703 704 4.815846 TGGTGTGTACGCTATCTTCGTATA 59.184 41.667 8.10 0.00 43.14 1.47
704 705 5.471116 TGGTGTGTACGCTATCTTCGTATAT 59.529 40.000 8.10 0.00 43.14 0.86
705 706 6.016860 TGGTGTGTACGCTATCTTCGTATATT 60.017 38.462 8.10 0.00 43.14 1.28
707 708 5.854866 TGTGTACGCTATCTTCGTATATTGC 59.145 40.000 8.10 0.00 43.14 3.56
709 710 6.581542 GTGTACGCTATCTTCGTATATTGCTT 59.418 38.462 0.00 0.00 43.14 3.91
710 711 6.581166 TGTACGCTATCTTCGTATATTGCTTG 59.419 38.462 0.00 0.00 43.14 4.01
711 712 5.769367 ACGCTATCTTCGTATATTGCTTGA 58.231 37.500 0.00 0.00 38.52 3.02
712 713 6.390721 ACGCTATCTTCGTATATTGCTTGAT 58.609 36.000 0.00 0.00 38.52 2.57
713 714 6.868864 ACGCTATCTTCGTATATTGCTTGATT 59.131 34.615 0.00 0.00 38.52 2.57
714 715 7.148738 ACGCTATCTTCGTATATTGCTTGATTG 60.149 37.037 0.00 0.00 38.52 2.67
716 717 8.499162 GCTATCTTCGTATATTGCTTGATTGTT 58.501 33.333 0.00 0.00 0.00 2.83
717 718 9.803130 CTATCTTCGTATATTGCTTGATTGTTG 57.197 33.333 0.00 0.00 0.00 3.33
718 719 6.486248 TCTTCGTATATTGCTTGATTGTTGC 58.514 36.000 0.00 0.00 0.00 4.17
724 725 9.877137 CGTATATTGCTTGATTGTTGCTTTATA 57.123 29.630 0.00 0.00 0.00 0.98
739 740 8.364142 TGTTGCTTTATATATAAACAATGGGGC 58.636 33.333 22.16 17.94 32.04 5.80
740 741 7.151999 TGCTTTATATATAAACAATGGGGCG 57.848 36.000 12.90 3.27 0.00 6.13
743 744 8.466798 GCTTTATATATAAACAATGGGGCGAAT 58.533 33.333 12.90 0.00 0.00 3.34
746 747 7.875327 ATATATAAACAATGGGGCGAATACC 57.125 36.000 0.00 0.00 0.00 2.73
748 749 3.655615 AAACAATGGGGCGAATACCTA 57.344 42.857 0.00 0.00 0.00 3.08
749 750 3.876309 AACAATGGGGCGAATACCTAT 57.124 42.857 0.00 0.00 0.00 2.57
792 1180 4.506886 AACAAAACAAAACACACGGAGA 57.493 36.364 0.00 0.00 0.00 3.71
809 1197 0.615261 AGAAGGGGGAGAGAACGGAC 60.615 60.000 0.00 0.00 0.00 4.79
810 1198 0.903454 GAAGGGGGAGAGAACGGACA 60.903 60.000 0.00 0.00 0.00 4.02
827 1215 2.032071 AGGAAGCAACCCGAACCG 59.968 61.111 0.00 0.00 0.00 4.44
842 1230 0.601841 AACCGAAACGAAGACGCCAT 60.602 50.000 0.00 0.00 43.96 4.40
872 1267 3.555956 ACACTCGCTAGTCAACAAAACAG 59.444 43.478 0.00 0.00 31.97 3.16
1405 1810 2.123077 CCTGGGCCGATCCTCTCT 60.123 66.667 0.00 0.00 34.39 3.10
1414 1819 1.906333 GATCCTCTCTCTCCCCCGC 60.906 68.421 0.00 0.00 0.00 6.13
1417 1822 4.465446 CTCTCTCTCCCCCGCCCA 62.465 72.222 0.00 0.00 0.00 5.36
1418 1823 3.765257 CTCTCTCTCCCCCGCCCAT 62.765 68.421 0.00 0.00 0.00 4.00
1420 1825 2.768344 TCTCTCCCCCGCCCATTC 60.768 66.667 0.00 0.00 0.00 2.67
1430 1835 2.750237 GCCCATTCCCGTTCGCTT 60.750 61.111 0.00 0.00 0.00 4.68
1431 1836 2.340328 GCCCATTCCCGTTCGCTTT 61.340 57.895 0.00 0.00 0.00 3.51
1435 1841 1.401018 CCATTCCCGTTCGCTTTTGTC 60.401 52.381 0.00 0.00 0.00 3.18
1439 1845 1.491563 CCGTTCGCTTTTGTCTCCG 59.508 57.895 0.00 0.00 0.00 4.63
1442 1848 1.396815 CGTTCGCTTTTGTCTCCGTTC 60.397 52.381 0.00 0.00 0.00 3.95
1471 1880 2.817396 GCGCCTGACCAGAAGCTC 60.817 66.667 0.00 0.00 0.00 4.09
1472 1881 2.977178 CGCCTGACCAGAAGCTCT 59.023 61.111 0.00 0.00 0.00 4.09
1473 1882 1.294780 CGCCTGACCAGAAGCTCTT 59.705 57.895 0.00 0.00 0.00 2.85
1474 1883 0.739112 CGCCTGACCAGAAGCTCTTC 60.739 60.000 1.52 1.52 39.78 2.87
1475 1884 0.322975 GCCTGACCAGAAGCTCTTCA 59.677 55.000 11.69 0.00 41.84 3.02
1477 1886 1.671261 CCTGACCAGAAGCTCTTCACG 60.671 57.143 11.69 3.98 41.84 4.35
1478 1887 0.319900 TGACCAGAAGCTCTTCACGC 60.320 55.000 11.69 0.21 41.84 5.34
1483 1906 0.948141 AGAAGCTCTTCACGCTGTGC 60.948 55.000 11.69 0.00 41.84 4.57
1597 2020 3.928769 CATGTCATCCGTGGCGCG 61.929 66.667 14.53 14.53 40.95 6.86
1600 2023 4.796231 GTCATCCGTGGCGCGTCT 62.796 66.667 20.01 2.75 39.32 4.18
1665 2088 8.616377 CTGACATATTCTTCAGCAAAATTCAG 57.384 34.615 0.00 0.00 33.23 3.02
1681 2104 2.336945 TCAGATAACAGCATGCCCAG 57.663 50.000 15.66 7.50 42.53 4.45
1682 2105 1.561076 TCAGATAACAGCATGCCCAGT 59.439 47.619 15.66 8.22 42.53 4.00
1683 2106 1.945394 CAGATAACAGCATGCCCAGTC 59.055 52.381 15.66 6.82 42.53 3.51
1688 2111 1.279496 ACAGCATGCCCAGTCTTCTA 58.721 50.000 15.66 0.00 42.53 2.10
1697 2120 6.352516 CATGCCCAGTCTTCTACTAGATTTT 58.647 40.000 0.00 0.00 35.76 1.82
1721 2236 8.624701 TTACGTTTATCGAAGGTTCATAGAAG 57.375 34.615 0.00 0.00 42.86 2.85
1739 2254 2.200373 AGGGTGTAATTGCTGTGGAC 57.800 50.000 0.00 0.00 0.00 4.02
1747 2262 1.826385 ATTGCTGTGGACCTGTAAGC 58.174 50.000 0.00 0.00 0.00 3.09
1748 2263 0.472044 TTGCTGTGGACCTGTAAGCA 59.528 50.000 6.81 6.81 41.87 3.91
1749 2264 0.035317 TGCTGTGGACCTGTAAGCAG 59.965 55.000 6.81 0.00 38.88 4.24
1750 2265 1.301677 GCTGTGGACCTGTAAGCAGC 61.302 60.000 0.00 0.00 41.26 5.25
1751 2266 0.322975 CTGTGGACCTGTAAGCAGCT 59.677 55.000 0.00 0.00 41.26 4.24
1752 2267 1.550524 CTGTGGACCTGTAAGCAGCTA 59.449 52.381 0.00 0.00 41.26 3.32
1753 2268 1.974957 TGTGGACCTGTAAGCAGCTAA 59.025 47.619 0.00 0.00 41.26 3.09
1754 2269 2.028112 TGTGGACCTGTAAGCAGCTAAG 60.028 50.000 0.00 0.00 41.26 2.18
1767 2282 2.090812 GCAGCTAAGAACTCGAACGAAC 59.909 50.000 0.00 0.00 0.00 3.95
1783 2313 3.946606 ACGAACGAATAAACAGGGGAAT 58.053 40.909 0.14 0.00 0.00 3.01
1784 2314 3.937079 ACGAACGAATAAACAGGGGAATC 59.063 43.478 0.14 0.00 0.00 2.52
1791 2321 4.674281 ATAAACAGGGGAATCGAGAGTC 57.326 45.455 0.00 0.00 0.00 3.36
1838 2369 3.747976 GGGCAATGTGGACGTGGC 61.748 66.667 0.00 0.00 0.00 5.01
1853 2384 4.632688 GGACGTGGCTGCTTAGTTTTAATA 59.367 41.667 0.00 0.00 0.00 0.98
1854 2385 5.446875 GGACGTGGCTGCTTAGTTTTAATAC 60.447 44.000 0.00 0.00 0.00 1.89
1855 2386 4.393990 ACGTGGCTGCTTAGTTTTAATACC 59.606 41.667 0.00 0.00 0.00 2.73
1856 2387 4.393680 CGTGGCTGCTTAGTTTTAATACCA 59.606 41.667 0.00 0.00 0.00 3.25
1857 2388 5.447279 CGTGGCTGCTTAGTTTTAATACCAG 60.447 44.000 0.00 0.00 0.00 4.00
1938 2474 2.230660 GTAGCAAATGGGTCCATAGGC 58.769 52.381 14.25 14.25 35.31 3.93
1941 2477 1.035139 CAAATGGGTCCATAGGCTGC 58.965 55.000 2.56 0.00 35.31 5.25
1990 2526 6.353323 TGTTTAACCTGACACATCTCTGAAA 58.647 36.000 0.00 0.00 0.00 2.69
2062 2598 4.720046 ACTTGATGCTAGATCCGAGACTA 58.280 43.478 0.00 0.00 0.00 2.59
2064 2600 4.625607 TGATGCTAGATCCGAGACTAGA 57.374 45.455 13.35 3.53 38.53 2.43
2068 2604 3.504134 TGCTAGATCCGAGACTAGAATGC 59.496 47.826 13.35 0.00 38.53 3.56
2069 2605 3.504134 GCTAGATCCGAGACTAGAATGCA 59.496 47.826 13.35 0.00 38.53 3.96
2070 2606 4.022762 GCTAGATCCGAGACTAGAATGCAA 60.023 45.833 13.35 0.00 38.53 4.08
2071 2607 5.508153 GCTAGATCCGAGACTAGAATGCAAA 60.508 44.000 13.35 0.00 38.53 3.68
2072 2608 5.344743 AGATCCGAGACTAGAATGCAAAA 57.655 39.130 0.00 0.00 0.00 2.44
2073 2609 5.923204 AGATCCGAGACTAGAATGCAAAAT 58.077 37.500 0.00 0.00 0.00 1.82
2074 2610 5.757320 AGATCCGAGACTAGAATGCAAAATG 59.243 40.000 0.00 0.00 0.00 2.32
2075 2611 3.623060 TCCGAGACTAGAATGCAAAATGC 59.377 43.478 0.00 0.00 45.29 3.56
2076 2612 3.624861 CCGAGACTAGAATGCAAAATGCT 59.375 43.478 0.00 0.00 45.31 3.79
2077 2613 4.811024 CCGAGACTAGAATGCAAAATGCTA 59.189 41.667 0.00 0.00 45.31 3.49
2078 2614 5.294306 CCGAGACTAGAATGCAAAATGCTAA 59.706 40.000 0.00 0.00 45.31 3.09
2105 2641 2.812011 ACCTATGCACTTTGGTTTCGTC 59.188 45.455 0.00 0.00 0.00 4.20
2174 3526 7.374228 GCTAATGTCACATGATGTCAATTTACG 59.626 37.037 0.00 0.00 29.85 3.18
2180 3532 6.760770 TCACATGATGTCAATTTACGCAGATA 59.239 34.615 0.00 0.00 0.00 1.98
2346 3698 0.606401 ACCAGGACAAGGATGTTGCG 60.606 55.000 0.00 0.00 40.74 4.85
2406 3758 3.333414 CCAGTTGGTGTGTCAGCG 58.667 61.111 0.00 0.00 34.27 5.18
2410 3762 1.227556 GTTGGTGTGTCAGCGGACT 60.228 57.895 17.94 0.00 44.61 3.85
2442 3794 3.129287 GTCAGAAAGTGTATGCCATTGGG 59.871 47.826 4.53 0.00 37.18 4.12
2525 3888 1.787847 CGCTTGACACCAATCGTCC 59.212 57.895 0.00 0.00 37.20 4.79
2526 3889 0.948623 CGCTTGACACCAATCGTCCA 60.949 55.000 0.00 0.00 37.20 4.02
2527 3890 0.798776 GCTTGACACCAATCGTCCAG 59.201 55.000 0.00 0.00 32.15 3.86
2528 3891 1.878102 GCTTGACACCAATCGTCCAGT 60.878 52.381 0.00 0.00 30.75 4.00
2529 3892 1.800586 CTTGACACCAATCGTCCAGTG 59.199 52.381 0.00 0.00 36.30 3.66
2581 3965 3.081804 AGTTCAAATTTCAGTAGGGCCG 58.918 45.455 0.00 0.00 0.00 6.13
2609 3993 7.012138 CCTGTTTCTGATCCTGATTATGTTGAG 59.988 40.741 0.00 0.00 0.00 3.02
2616 4001 5.023533 TCCTGATTATGTTGAGGTAGCAC 57.976 43.478 0.00 0.00 0.00 4.40
2623 4008 6.724893 TTATGTTGAGGTAGCACTAGCATA 57.275 37.500 9.36 0.00 45.49 3.14
2636 4021 7.035840 AGCACTAGCATAGGAAATGAAAATG 57.964 36.000 0.00 0.00 44.97 2.32
2637 4022 6.604795 AGCACTAGCATAGGAAATGAAAATGT 59.395 34.615 0.00 0.00 44.97 2.71
2638 4023 6.694411 GCACTAGCATAGGAAATGAAAATGTG 59.306 38.462 0.00 0.00 44.97 3.21
2665 4050 9.838975 CTACACAGCATCACAAACAAATAATAA 57.161 29.630 0.00 0.00 0.00 1.40
2693 4078 2.978156 ACCATGACCAAGTGTCCAAT 57.022 45.000 0.00 0.00 43.78 3.16
2705 4090 1.665679 GTGTCCAATCACTGGTATGCG 59.334 52.381 0.00 0.00 46.51 4.73
2706 4091 1.299541 GTCCAATCACTGGTATGCGG 58.700 55.000 0.00 0.00 46.51 5.69
2745 4133 8.391106 GCTAAGCAACTATGTATGGCATATTAC 58.609 37.037 10.92 0.84 39.16 1.89
2977 4369 3.181476 ACGTTGGCTGATTCTTTTTGCTT 60.181 39.130 0.00 0.00 0.00 3.91
3042 4434 1.816863 TTCTCCCAGTGGACTGCGAC 61.817 60.000 11.95 0.00 42.47 5.19
3200 4592 1.487976 TCACCTTCAGGAGCATCATCC 59.512 52.381 0.00 0.00 39.89 3.51
3280 4672 4.021102 TGGATTTGTTCTGGGTCTTCTC 57.979 45.455 0.00 0.00 0.00 2.87
3448 4849 0.807496 GAGTGCTTGTCTTGGATGCC 59.193 55.000 0.00 0.00 0.00 4.40
3492 4893 4.850347 AAGCGGTACTGTCCATCTATAC 57.150 45.455 3.10 0.00 0.00 1.47
3520 4921 9.872721 ATACACATGTTTGATGCAAATTCAATA 57.127 25.926 0.00 0.00 35.74 1.90
3521 4922 8.604640 ACACATGTTTGATGCAAATTCAATAA 57.395 26.923 0.00 0.00 35.74 1.40
3540 4941 7.213678 TCAATAAAACTTGATTGGAAACCACC 58.786 34.615 0.60 0.00 34.45 4.61
3631 5032 5.221048 GCATGAGAAAACCTTGTACTGTTGT 60.221 40.000 0.00 0.00 0.00 3.32
3632 5033 6.430451 CATGAGAAAACCTTGTACTGTTGTC 58.570 40.000 0.00 0.42 0.00 3.18
3704 5105 7.481642 TCTCTGATTGTCGGAACTAAGAATAC 58.518 38.462 0.00 0.00 30.21 1.89
3753 5154 8.863049 CATTTGATAAGAACCAAACTTATGTGC 58.137 33.333 0.00 0.00 39.61 4.57
3764 5165 7.951591 ACCAAACTTATGTGCAGAATAAACTT 58.048 30.769 0.00 0.00 0.00 2.66
3791 5192 9.847224 GTCTTTCCTGTTCCTTCCATATAATTA 57.153 33.333 0.00 0.00 0.00 1.40
4013 5414 0.377905 GTCGGAGAGACGGTAAGCTC 59.622 60.000 0.00 0.00 40.43 4.09
4025 5426 1.547372 GGTAAGCTCTCACCCGTGTTA 59.453 52.381 0.00 0.00 0.00 2.41
4026 5427 2.603953 GTAAGCTCTCACCCGTGTTAC 58.396 52.381 0.00 0.00 0.00 2.50
4028 5429 0.603569 AGCTCTCACCCGTGTTACAG 59.396 55.000 0.00 0.00 0.00 2.74
4029 5430 1.014564 GCTCTCACCCGTGTTACAGC 61.015 60.000 0.00 0.00 0.00 4.40
4030 5431 0.317160 CTCTCACCCGTGTTACAGCA 59.683 55.000 0.00 0.00 0.00 4.41
4031 5432 0.753867 TCTCACCCGTGTTACAGCAA 59.246 50.000 0.00 0.00 0.00 3.91
4032 5433 0.865769 CTCACCCGTGTTACAGCAAC 59.134 55.000 0.00 0.00 37.67 4.17
4242 5644 1.153549 CTACCACGGAGCTCCTTGC 60.154 63.158 29.27 5.70 43.29 4.01
4275 5677 7.644490 TGATGTTTGTAAATTGTCTGGTGTAC 58.356 34.615 0.00 0.00 0.00 2.90
4371 5780 9.083422 TCTATCTGCTTACATATGCTACTCTTT 57.917 33.333 1.58 0.00 0.00 2.52
4372 5781 7.959689 ATCTGCTTACATATGCTACTCTTTG 57.040 36.000 1.58 0.00 0.00 2.77
4378 5787 7.062371 GCTTACATATGCTACTCTTTGATACCG 59.938 40.741 1.58 0.00 0.00 4.02
4382 5791 4.303086 TGCTACTCTTTGATACCGCTAC 57.697 45.455 0.00 0.00 0.00 3.58
4399 5816 5.106442 CCGCTACATAGTGTGACAATAACA 58.894 41.667 0.00 0.00 32.08 2.41
4429 6178 3.324846 TCAGCCGTTAGATATGCTCCATT 59.675 43.478 0.00 0.00 30.08 3.16
4460 6209 9.183368 GGATAAAGTTTTCATCTCAGAGGATTT 57.817 33.333 0.00 0.00 0.00 2.17
4488 6237 5.048294 ACACGTGATCTTTTAATTGAACCCC 60.048 40.000 25.01 0.00 0.00 4.95
4504 6253 4.419875 TGAACCCCCATTCTATCATCCATT 59.580 41.667 0.00 0.00 0.00 3.16
4532 6281 6.065976 TCTAGAAGCATCTTTTTCCCATGA 57.934 37.500 0.00 0.00 37.10 3.07
4537 6286 3.512724 AGCATCTTTTTCCCATGACAAGG 59.487 43.478 0.00 0.00 0.00 3.61
4551 6300 6.830324 CCCATGACAAGGATCTGATTCTAAAA 59.170 38.462 0.00 0.00 0.00 1.52
4586 6335 2.879103 TTTTAGAGAGTTGGGCCCTG 57.121 50.000 25.70 0.00 0.00 4.45
4587 6336 0.328258 TTTAGAGAGTTGGGCCCTGC 59.672 55.000 25.70 15.80 0.00 4.85
4594 6343 0.613012 AGTTGGGCCCTGCATTCTTC 60.613 55.000 25.70 2.69 0.00 2.87
4599 6348 0.819259 GGCCCTGCATTCTTCGCATA 60.819 55.000 0.00 0.00 39.02 3.14
4665 6578 9.511272 TCATATATTTGATGACTTGCTTAGCAT 57.489 29.630 8.05 0.00 38.76 3.79
4678 6595 4.735985 TGCTTAGCATGTACAATTTGCTG 58.264 39.130 25.62 14.76 45.76 4.41
4679 6596 3.549070 GCTTAGCATGTACAATTTGCTGC 59.451 43.478 25.62 19.27 45.76 5.25
4680 6597 4.676196 GCTTAGCATGTACAATTTGCTGCT 60.676 41.667 25.62 22.79 45.76 4.24
4681 6598 3.498927 AGCATGTACAATTTGCTGCTC 57.501 42.857 19.11 0.00 44.63 4.26
4682 6599 2.165030 AGCATGTACAATTTGCTGCTCC 59.835 45.455 19.11 0.00 44.63 4.70
4683 6600 2.736400 GCATGTACAATTTGCTGCTCCC 60.736 50.000 11.78 0.00 33.61 4.30
4684 6601 2.584835 TGTACAATTTGCTGCTCCCT 57.415 45.000 0.00 0.00 0.00 4.20
4685 6602 2.436417 TGTACAATTTGCTGCTCCCTC 58.564 47.619 0.00 0.00 0.00 4.30
4686 6603 1.745653 GTACAATTTGCTGCTCCCTCC 59.254 52.381 0.00 0.00 0.00 4.30
4687 6604 0.407139 ACAATTTGCTGCTCCCTCCT 59.593 50.000 0.00 0.00 0.00 3.69
4688 6605 1.635487 ACAATTTGCTGCTCCCTCCTA 59.365 47.619 0.00 0.00 0.00 2.94
4689 6606 2.019984 CAATTTGCTGCTCCCTCCTAC 58.980 52.381 0.00 0.00 0.00 3.18
4690 6607 0.548510 ATTTGCTGCTCCCTCCTACC 59.451 55.000 0.00 0.00 0.00 3.18
4691 6608 1.562672 TTTGCTGCTCCCTCCTACCC 61.563 60.000 0.00 0.00 0.00 3.69
4692 6609 2.365635 GCTGCTCCCTCCTACCCA 60.366 66.667 0.00 0.00 0.00 4.51
4693 6610 1.995626 GCTGCTCCCTCCTACCCAA 60.996 63.158 0.00 0.00 0.00 4.12
4694 6611 1.562672 GCTGCTCCCTCCTACCCAAA 61.563 60.000 0.00 0.00 0.00 3.28
4695 6612 1.216990 CTGCTCCCTCCTACCCAAAT 58.783 55.000 0.00 0.00 0.00 2.32
4696 6613 1.566231 CTGCTCCCTCCTACCCAAATT 59.434 52.381 0.00 0.00 0.00 1.82
4697 6614 2.777692 CTGCTCCCTCCTACCCAAATTA 59.222 50.000 0.00 0.00 0.00 1.40
4698 6615 3.194620 TGCTCCCTCCTACCCAAATTAA 58.805 45.455 0.00 0.00 0.00 1.40
4699 6616 3.791545 TGCTCCCTCCTACCCAAATTAAT 59.208 43.478 0.00 0.00 0.00 1.40
4700 6617 4.231890 TGCTCCCTCCTACCCAAATTAATT 59.768 41.667 0.00 0.00 0.00 1.40
4701 6618 4.584743 GCTCCCTCCTACCCAAATTAATTG 59.415 45.833 0.39 0.00 38.84 2.32
4702 6619 5.633854 GCTCCCTCCTACCCAAATTAATTGA 60.634 44.000 0.39 0.00 41.85 2.57
4703 6620 5.762279 TCCCTCCTACCCAAATTAATTGAC 58.238 41.667 0.39 0.00 41.85 3.18
4704 6621 5.254267 TCCCTCCTACCCAAATTAATTGACA 59.746 40.000 0.39 0.00 41.85 3.58
4705 6622 5.359860 CCCTCCTACCCAAATTAATTGACAC 59.640 44.000 0.39 0.00 41.85 3.67
4706 6623 6.187682 CCTCCTACCCAAATTAATTGACACT 58.812 40.000 0.39 0.00 41.85 3.55
4707 6624 6.095440 CCTCCTACCCAAATTAATTGACACTG 59.905 42.308 0.39 0.00 41.85 3.66
4708 6625 6.785076 TCCTACCCAAATTAATTGACACTGA 58.215 36.000 0.39 0.00 41.85 3.41
4709 6626 6.657541 TCCTACCCAAATTAATTGACACTGAC 59.342 38.462 0.39 0.00 41.85 3.51
4710 6627 6.432783 CCTACCCAAATTAATTGACACTGACA 59.567 38.462 0.39 0.00 41.85 3.58
4711 6628 6.723298 ACCCAAATTAATTGACACTGACAA 57.277 33.333 0.39 0.00 41.85 3.18
4712 6629 7.118496 ACCCAAATTAATTGACACTGACAAA 57.882 32.000 0.39 0.00 41.85 2.83
4713 6630 7.209475 ACCCAAATTAATTGACACTGACAAAG 58.791 34.615 0.39 0.00 41.85 2.77
4714 6631 7.147742 ACCCAAATTAATTGACACTGACAAAGT 60.148 33.333 0.39 0.00 41.85 2.66
4715 6632 8.356657 CCCAAATTAATTGACACTGACAAAGTA 58.643 33.333 0.39 0.00 41.85 2.24
4716 6633 9.180678 CCAAATTAATTGACACTGACAAAGTAC 57.819 33.333 0.39 0.00 41.85 2.73
4717 6634 9.729023 CAAATTAATTGACACTGACAAAGTACA 57.271 29.630 0.39 0.00 41.85 2.90
4719 6636 9.730420 AATTAATTGACACTGACAAAGTACAAC 57.270 29.630 0.00 0.00 36.83 3.32
4720 6637 8.500753 TTAATTGACACTGACAAAGTACAACT 57.499 30.769 0.00 0.00 36.83 3.16
4721 6638 7.391148 AATTGACACTGACAAAGTACAACTT 57.609 32.000 0.00 0.00 40.80 2.66
4723 6640 7.908827 TTGACACTGACAAAGTACAACTTTA 57.091 32.000 4.81 0.00 45.84 1.85
4724 6641 8.500753 TTGACACTGACAAAGTACAACTTTAT 57.499 30.769 4.81 0.00 45.84 1.40
4725 6642 9.602568 TTGACACTGACAAAGTACAACTTTATA 57.397 29.630 4.81 0.00 45.84 0.98
4726 6643 9.037737 TGACACTGACAAAGTACAACTTTATAC 57.962 33.333 4.81 1.73 45.84 1.47
4727 6644 9.257651 GACACTGACAAAGTACAACTTTATACT 57.742 33.333 4.81 0.00 45.84 2.12
4770 6687 9.964354 ATCATCAATTAATATGGATCGAAAGGA 57.036 29.630 0.00 0.00 0.00 3.36
4771 6688 9.219603 TCATCAATTAATATGGATCGAAAGGAC 57.780 33.333 0.00 0.00 0.00 3.85
4772 6689 9.224267 CATCAATTAATATGGATCGAAAGGACT 57.776 33.333 0.00 0.00 0.00 3.85
4817 6734 8.552296 ACCTTGACATTGGAAATATTCTACTCT 58.448 33.333 2.47 0.00 0.00 3.24
4818 6735 9.050601 CCTTGACATTGGAAATATTCTACTCTC 57.949 37.037 0.00 0.00 0.00 3.20
4879 6796 8.540492 CAATATGGACTACATACGAACTGAAAC 58.460 37.037 0.00 0.00 44.41 2.78
4880 6797 4.478699 TGGACTACATACGAACTGAAACG 58.521 43.478 0.00 0.00 0.00 3.60
4881 6798 4.216042 TGGACTACATACGAACTGAAACGA 59.784 41.667 0.00 0.00 0.00 3.85
4882 6799 4.792189 GGACTACATACGAACTGAAACGAG 59.208 45.833 0.00 0.00 0.00 4.18
4883 6800 5.391310 GGACTACATACGAACTGAAACGAGA 60.391 44.000 0.00 0.00 0.00 4.04
4884 6801 5.629097 ACTACATACGAACTGAAACGAGAG 58.371 41.667 0.00 0.00 0.00 3.20
4885 6802 4.761235 ACATACGAACTGAAACGAGAGA 57.239 40.909 0.00 0.00 0.00 3.10
4886 6803 5.117355 ACATACGAACTGAAACGAGAGAA 57.883 39.130 0.00 0.00 0.00 2.87
4887 6804 4.916249 ACATACGAACTGAAACGAGAGAAC 59.084 41.667 0.00 0.00 0.00 3.01
4888 6805 3.431922 ACGAACTGAAACGAGAGAACA 57.568 42.857 0.00 0.00 0.00 3.18
4889 6806 3.777478 ACGAACTGAAACGAGAGAACAA 58.223 40.909 0.00 0.00 0.00 2.83
4890 6807 4.178540 ACGAACTGAAACGAGAGAACAAA 58.821 39.130 0.00 0.00 0.00 2.83
4891 6808 4.032558 ACGAACTGAAACGAGAGAACAAAC 59.967 41.667 0.00 0.00 0.00 2.93
4892 6809 4.032445 CGAACTGAAACGAGAGAACAAACA 59.968 41.667 0.00 0.00 0.00 2.83
4893 6810 4.859629 ACTGAAACGAGAGAACAAACAC 57.140 40.909 0.00 0.00 0.00 3.32
4898 6815 5.290158 TGAAACGAGAGAACAAACACACTAC 59.710 40.000 0.00 0.00 0.00 2.73
4911 6828 4.579454 ACACACTACAACGTGTCTACAT 57.421 40.909 0.00 0.00 45.74 2.29
4917 6834 6.150641 ACACTACAACGTGTCTACATACATCT 59.849 38.462 0.00 0.00 44.32 2.90
4918 6835 6.469275 CACTACAACGTGTCTACATACATCTG 59.531 42.308 0.00 0.00 0.00 2.90
4921 6838 6.631016 ACAACGTGTCTACATACATCTGATT 58.369 36.000 0.00 0.00 0.00 2.57
4924 6841 9.249457 CAACGTGTCTACATACATCTGATTTAT 57.751 33.333 0.00 0.00 0.00 1.40
4980 6899 5.360591 GGAGAGTAGTTCTGAGAGAGAGAG 58.639 50.000 0.00 0.00 35.87 3.20
4984 6903 7.458397 AGAGTAGTTCTGAGAGAGAGAGAAAA 58.542 38.462 0.00 0.00 33.93 2.29
5007 6926 8.871686 AAAAAGTGAACACAACATAATTCTCC 57.128 30.769 7.68 0.00 0.00 3.71
5031 6950 3.339253 TCTGGACCAACTCATGACATG 57.661 47.619 9.28 9.28 0.00 3.21
5045 6964 5.712004 TCATGACATGGTGTTATTGCAAAG 58.288 37.500 15.37 0.00 0.00 2.77
5046 6965 5.476254 TCATGACATGGTGTTATTGCAAAGA 59.524 36.000 15.37 0.00 0.00 2.52
5047 6966 5.981088 TGACATGGTGTTATTGCAAAGAT 57.019 34.783 1.71 0.00 0.00 2.40
5048 6967 7.338957 TCATGACATGGTGTTATTGCAAAGATA 59.661 33.333 15.37 0.00 0.00 1.98
5049 6968 7.459795 TGACATGGTGTTATTGCAAAGATAA 57.540 32.000 1.71 0.00 0.00 1.75
5050 6969 7.312154 TGACATGGTGTTATTGCAAAGATAAC 58.688 34.615 1.71 8.82 39.36 1.89
5052 6971 7.839907 ACATGGTGTTATTGCAAAGATAACAT 58.160 30.769 21.01 14.19 46.03 2.71
5053 6972 8.965819 ACATGGTGTTATTGCAAAGATAACATA 58.034 29.630 21.01 15.52 46.03 2.29
5112 7054 0.670546 ATCACACAAAGGACGCTCCG 60.671 55.000 0.00 0.00 42.75 4.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 6.457355 TGCAAGCTATTCACATCAACAATTT 58.543 32.000 0.00 0.00 0.00 1.82
13 14 8.681486 ATATCTTAACATGCAAGCTATTCACA 57.319 30.769 0.00 0.00 0.00 3.58
36 37 1.343681 GGACACCCCCACTACCTGATA 60.344 57.143 0.00 0.00 0.00 2.15
47 48 4.906060 ACTAGATGTAAATAGGACACCCCC 59.094 45.833 0.00 0.00 34.66 5.40
114 115 9.781834 TTTACACTCAGTTTCATTGTTGTTTAG 57.218 29.630 0.00 0.00 0.00 1.85
174 175 7.670605 AGGCCAGACATTACAAATAGTAGTA 57.329 36.000 5.01 0.00 33.43 1.82
175 176 6.561519 AGGCCAGACATTACAAATAGTAGT 57.438 37.500 5.01 0.00 33.43 2.73
176 177 8.993121 CAATAGGCCAGACATTACAAATAGTAG 58.007 37.037 5.01 0.00 33.43 2.57
177 178 7.936847 CCAATAGGCCAGACATTACAAATAGTA 59.063 37.037 5.01 0.00 0.00 1.82
178 179 6.772716 CCAATAGGCCAGACATTACAAATAGT 59.227 38.462 5.01 0.00 0.00 2.12
179 180 6.772716 ACCAATAGGCCAGACATTACAAATAG 59.227 38.462 5.01 0.00 39.06 1.73
185 186 4.455877 GCATACCAATAGGCCAGACATTAC 59.544 45.833 5.01 0.00 39.06 1.89
197 198 2.738846 GGATGAGCACGCATACCAATAG 59.261 50.000 0.00 0.00 0.00 1.73
199 200 1.597742 GGATGAGCACGCATACCAAT 58.402 50.000 0.00 0.00 0.00 3.16
210 211 0.614697 TCTTGGTCTCGGGATGAGCA 60.615 55.000 0.00 0.00 44.86 4.26
212 213 0.749649 CCTCTTGGTCTCGGGATGAG 59.250 60.000 0.00 0.00 46.72 2.90
218 219 2.893637 CAACATACCTCTTGGTCTCGG 58.106 52.381 0.00 0.00 44.78 4.63
273 274 3.996150 CAATGGACATTGGTAGATGGC 57.004 47.619 15.46 0.00 43.25 4.40
285 286 1.004628 CTGGATCACACCCAATGGACA 59.995 52.381 0.00 0.00 32.53 4.02
287 288 0.625316 CCTGGATCACACCCAATGGA 59.375 55.000 0.00 0.00 32.53 3.41
291 292 0.112218 CAACCCTGGATCACACCCAA 59.888 55.000 0.00 0.00 32.53 4.12
294 295 0.693049 AGACAACCCTGGATCACACC 59.307 55.000 0.00 0.00 0.00 4.16
303 304 2.159142 GGTACCATCGTAGACAACCCTG 60.159 54.545 7.15 0.00 42.51 4.45
304 305 2.105766 GGTACCATCGTAGACAACCCT 58.894 52.381 7.15 0.00 42.51 4.34
330 331 3.706373 CGACACCCCACCCTCCAG 61.706 72.222 0.00 0.00 0.00 3.86
401 402 4.606071 CTGCAAGGAGGAGAACGG 57.394 61.111 0.00 0.00 38.04 4.44
416 417 2.098293 GCAGGGTAAACGATGCCTG 58.902 57.895 0.00 0.00 33.60 4.85
443 444 2.711542 AGGTAGCAATCGTTTGAAGGG 58.288 47.619 10.37 0.00 34.60 3.95
453 454 2.596904 TGCGGAACTAGGTAGCAATC 57.403 50.000 7.84 0.00 34.66 2.67
461 462 2.203209 GGGCCATGCGGAACTAGG 60.203 66.667 4.39 0.00 0.00 3.02
469 470 1.386525 AACTAGCAATGGGCCATGCG 61.387 55.000 22.01 15.63 46.50 4.73
479 480 1.270550 GCAAGGCACACAACTAGCAAT 59.729 47.619 0.00 0.00 0.00 3.56
487 488 3.431055 CCTTCGCAAGGCACACAA 58.569 55.556 2.58 0.00 42.78 3.33
499 500 1.078426 CCAAGTAGGCCACCCTTCG 60.078 63.158 5.01 0.00 42.87 3.79
500 501 1.303282 CCCAAGTAGGCCACCCTTC 59.697 63.158 5.01 0.00 42.87 3.46
502 503 2.614013 CCCCAAGTAGGCCACCCT 60.614 66.667 5.01 0.00 45.61 4.34
503 504 2.612746 TCCCCAAGTAGGCCACCC 60.613 66.667 5.01 0.00 35.39 4.61
512 513 1.306141 TCGAGGCATCTCCCCAAGT 60.306 57.895 0.00 0.00 36.70 3.16
528 529 3.068691 TCTTCCCGGAGTGCCTCG 61.069 66.667 0.73 0.00 0.00 4.63
529 530 1.545706 AAGTCTTCCCGGAGTGCCTC 61.546 60.000 0.73 0.00 0.00 4.70
530 531 1.536662 AAGTCTTCCCGGAGTGCCT 60.537 57.895 0.73 0.00 0.00 4.75
531 532 1.376037 CAAGTCTTCCCGGAGTGCC 60.376 63.158 0.73 0.00 0.00 5.01
533 534 0.951040 GCACAAGTCTTCCCGGAGTG 60.951 60.000 0.73 0.00 0.00 3.51
534 535 1.122019 AGCACAAGTCTTCCCGGAGT 61.122 55.000 0.73 0.00 0.00 3.85
535 536 0.671781 CAGCACAAGTCTTCCCGGAG 60.672 60.000 0.73 0.00 0.00 4.63
536 537 1.118965 TCAGCACAAGTCTTCCCGGA 61.119 55.000 0.73 0.00 0.00 5.14
537 538 0.036010 ATCAGCACAAGTCTTCCCGG 60.036 55.000 0.00 0.00 0.00 5.73
538 539 1.466167 CAATCAGCACAAGTCTTCCCG 59.534 52.381 0.00 0.00 0.00 5.14
539 540 1.200948 GCAATCAGCACAAGTCTTCCC 59.799 52.381 0.00 0.00 44.79 3.97
551 552 1.941999 GCTTGGTCCTGGCAATCAGC 61.942 60.000 0.00 0.00 42.05 4.26
552 553 1.651240 CGCTTGGTCCTGGCAATCAG 61.651 60.000 7.27 0.00 43.00 2.90
555 556 1.377725 CTCGCTTGGTCCTGGCAAT 60.378 57.895 7.27 0.00 0.00 3.56
556 557 2.032528 CTCGCTTGGTCCTGGCAA 59.967 61.111 7.27 0.00 0.00 4.52
557 558 4.704833 GCTCGCTTGGTCCTGGCA 62.705 66.667 7.27 0.00 0.00 4.92
558 559 4.400961 AGCTCGCTTGGTCCTGGC 62.401 66.667 0.00 0.00 0.00 4.85
559 560 2.125350 GAGCTCGCTTGGTCCTGG 60.125 66.667 0.00 0.00 0.00 4.45
563 564 1.066787 ACTAAAGGAGCTCGCTTGGTC 60.067 52.381 15.46 0.00 0.00 4.02
564 565 0.977395 ACTAAAGGAGCTCGCTTGGT 59.023 50.000 15.46 12.20 0.00 3.67
565 566 2.003301 GAACTAAAGGAGCTCGCTTGG 58.997 52.381 15.46 11.66 0.00 3.61
567 568 1.066071 GGGAACTAAAGGAGCTCGCTT 60.066 52.381 7.83 9.48 0.00 4.68
568 569 0.537653 GGGAACTAAAGGAGCTCGCT 59.462 55.000 7.83 3.11 0.00 4.93
570 571 0.531200 ACGGGAACTAAAGGAGCTCG 59.469 55.000 7.83 0.00 0.00 5.03
571 572 2.007547 GCACGGGAACTAAAGGAGCTC 61.008 57.143 4.71 4.71 0.00 4.09
572 573 0.036294 GCACGGGAACTAAAGGAGCT 60.036 55.000 0.00 0.00 0.00 4.09
573 574 0.036294 AGCACGGGAACTAAAGGAGC 60.036 55.000 0.00 0.00 0.00 4.70
574 575 2.076863 CAAGCACGGGAACTAAAGGAG 58.923 52.381 0.00 0.00 0.00 3.69
575 576 1.880646 GCAAGCACGGGAACTAAAGGA 60.881 52.381 0.00 0.00 0.00 3.36
576 577 0.521735 GCAAGCACGGGAACTAAAGG 59.478 55.000 0.00 0.00 0.00 3.11
577 578 1.523758 AGCAAGCACGGGAACTAAAG 58.476 50.000 0.00 0.00 0.00 1.85
578 579 1.975660 AAGCAAGCACGGGAACTAAA 58.024 45.000 0.00 0.00 0.00 1.85
579 580 2.038033 ACTAAGCAAGCACGGGAACTAA 59.962 45.455 0.00 0.00 0.00 2.24
580 581 1.621814 ACTAAGCAAGCACGGGAACTA 59.378 47.619 0.00 0.00 0.00 2.24
581 582 0.396811 ACTAAGCAAGCACGGGAACT 59.603 50.000 0.00 0.00 0.00 3.01
582 583 1.235724 AACTAAGCAAGCACGGGAAC 58.764 50.000 0.00 0.00 0.00 3.62
584 585 1.606668 CAAAACTAAGCAAGCACGGGA 59.393 47.619 0.00 0.00 0.00 5.14
586 587 1.001378 AGCAAAACTAAGCAAGCACGG 60.001 47.619 0.00 0.00 0.00 4.94
587 588 2.405892 AGCAAAACTAAGCAAGCACG 57.594 45.000 0.00 0.00 0.00 5.34
588 589 4.860072 ACTAAGCAAAACTAAGCAAGCAC 58.140 39.130 0.00 0.00 0.00 4.40
589 590 4.023193 GGACTAAGCAAAACTAAGCAAGCA 60.023 41.667 0.00 0.00 0.00 3.91
590 591 4.476862 GGACTAAGCAAAACTAAGCAAGC 58.523 43.478 0.00 0.00 0.00 4.01
591 592 4.762251 AGGGACTAAGCAAAACTAAGCAAG 59.238 41.667 0.00 0.00 36.02 4.01
592 593 4.518970 CAGGGACTAAGCAAAACTAAGCAA 59.481 41.667 0.00 0.00 36.02 3.91
593 594 4.072131 CAGGGACTAAGCAAAACTAAGCA 58.928 43.478 0.00 0.00 36.02 3.91
594 595 4.072839 ACAGGGACTAAGCAAAACTAAGC 58.927 43.478 0.00 0.00 36.02 3.09
595 596 5.063880 ACACAGGGACTAAGCAAAACTAAG 58.936 41.667 0.00 0.00 36.02 2.18
597 598 4.699925 ACACAGGGACTAAGCAAAACTA 57.300 40.909 0.00 0.00 36.02 2.24
598 599 3.577805 ACACAGGGACTAAGCAAAACT 57.422 42.857 0.00 0.00 36.02 2.66
599 600 4.649088 AAACACAGGGACTAAGCAAAAC 57.351 40.909 0.00 0.00 36.02 2.43
600 601 5.415221 CAAAAACACAGGGACTAAGCAAAA 58.585 37.500 0.00 0.00 36.02 2.44
601 602 4.142049 CCAAAAACACAGGGACTAAGCAAA 60.142 41.667 0.00 0.00 36.02 3.68
602 603 3.383185 CCAAAAACACAGGGACTAAGCAA 59.617 43.478 0.00 0.00 36.02 3.91
603 604 2.955660 CCAAAAACACAGGGACTAAGCA 59.044 45.455 0.00 0.00 36.02 3.91
604 605 2.296190 CCCAAAAACACAGGGACTAAGC 59.704 50.000 0.00 0.00 45.80 3.09
609 610 1.037493 GGACCCAAAAACACAGGGAC 58.963 55.000 3.32 0.00 45.80 4.46
625 626 1.002502 AAACAGCTAAGCGGGGGAC 60.003 57.895 0.00 0.00 0.00 4.46
626 627 1.298667 GAAACAGCTAAGCGGGGGA 59.701 57.895 0.00 0.00 0.00 4.81
628 629 1.079405 TCGAAACAGCTAAGCGGGG 60.079 57.895 0.00 0.00 0.00 5.73
630 631 1.710339 GCTCGAAACAGCTAAGCGG 59.290 57.895 0.00 0.00 36.38 5.52
637 638 2.682836 AGAAGAGAAGCTCGAAACAGC 58.317 47.619 0.00 0.00 39.99 4.40
638 639 5.685511 GCTATAGAAGAGAAGCTCGAAACAG 59.314 44.000 3.21 0.00 35.36 3.16
640 641 5.685511 CAGCTATAGAAGAGAAGCTCGAAAC 59.314 44.000 3.21 0.00 43.26 2.78
642 643 4.277174 CCAGCTATAGAAGAGAAGCTCGAA 59.723 45.833 3.21 0.00 43.26 3.71
643 644 3.818210 CCAGCTATAGAAGAGAAGCTCGA 59.182 47.826 3.21 0.00 43.26 4.04
644 645 3.568007 ACCAGCTATAGAAGAGAAGCTCG 59.432 47.826 3.21 0.00 43.26 5.03
645 646 6.127730 GGATACCAGCTATAGAAGAGAAGCTC 60.128 46.154 3.21 0.00 43.26 4.09
646 647 5.714806 GGATACCAGCTATAGAAGAGAAGCT 59.285 44.000 3.21 0.00 45.94 3.74
647 648 5.961272 GGATACCAGCTATAGAAGAGAAGC 58.039 45.833 3.21 0.00 35.16 3.86
670 671 1.742411 CGTACACACCAGCCCTATTGG 60.742 57.143 0.00 0.00 41.60 3.16
671 672 1.651987 CGTACACACCAGCCCTATTG 58.348 55.000 0.00 0.00 0.00 1.90
672 673 0.107848 GCGTACACACCAGCCCTATT 60.108 55.000 0.00 0.00 0.00 1.73
673 674 0.976073 AGCGTACACACCAGCCCTAT 60.976 55.000 0.00 0.00 0.00 2.57
674 675 0.323633 TAGCGTACACACCAGCCCTA 60.324 55.000 0.00 0.00 0.00 3.53
675 676 0.976073 ATAGCGTACACACCAGCCCT 60.976 55.000 0.00 0.00 0.00 5.19
676 677 0.529992 GATAGCGTACACACCAGCCC 60.530 60.000 0.00 0.00 0.00 5.19
678 679 2.194271 GAAGATAGCGTACACACCAGC 58.806 52.381 0.00 0.00 0.00 4.85
679 680 2.159421 ACGAAGATAGCGTACACACCAG 60.159 50.000 0.00 0.00 40.65 4.00
680 681 1.814394 ACGAAGATAGCGTACACACCA 59.186 47.619 0.00 0.00 40.65 4.17
681 682 2.556534 ACGAAGATAGCGTACACACC 57.443 50.000 0.00 0.00 40.65 4.16
682 683 6.183359 GCAATATACGAAGATAGCGTACACAC 60.183 42.308 0.00 0.00 45.58 3.82
683 684 5.854866 GCAATATACGAAGATAGCGTACACA 59.145 40.000 0.00 0.00 45.58 3.72
684 685 6.084925 AGCAATATACGAAGATAGCGTACAC 58.915 40.000 0.00 0.00 45.58 2.90
686 687 6.800408 TCAAGCAATATACGAAGATAGCGTAC 59.200 38.462 0.00 0.00 45.58 3.67
687 688 6.905578 TCAAGCAATATACGAAGATAGCGTA 58.094 36.000 0.00 0.00 46.62 4.42
688 689 5.769367 TCAAGCAATATACGAAGATAGCGT 58.231 37.500 0.00 0.00 45.01 5.07
689 690 6.877556 ATCAAGCAATATACGAAGATAGCG 57.122 37.500 0.00 0.00 0.00 4.26
691 692 9.803130 CAACAATCAAGCAATATACGAAGATAG 57.197 33.333 0.00 0.00 0.00 2.08
692 693 8.282592 GCAACAATCAAGCAATATACGAAGATA 58.717 33.333 0.00 0.00 0.00 1.98
693 694 7.012704 AGCAACAATCAAGCAATATACGAAGAT 59.987 33.333 0.00 0.00 0.00 2.40
694 695 6.316140 AGCAACAATCAAGCAATATACGAAGA 59.684 34.615 0.00 0.00 0.00 2.87
697 698 6.435430 AAGCAACAATCAAGCAATATACGA 57.565 33.333 0.00 0.00 0.00 3.43
713 714 8.364142 GCCCCATTGTTTATATATAAAGCAACA 58.636 33.333 21.95 14.67 33.31 3.33
714 715 7.540745 CGCCCCATTGTTTATATATAAAGCAAC 59.459 37.037 21.95 12.99 33.31 4.17
716 717 6.943146 TCGCCCCATTGTTTATATATAAAGCA 59.057 34.615 16.53 14.19 33.31 3.91
717 718 7.385778 TCGCCCCATTGTTTATATATAAAGC 57.614 36.000 16.53 13.29 33.31 3.51
724 725 5.887754 AGGTATTCGCCCCATTGTTTATAT 58.112 37.500 0.00 0.00 0.00 0.86
725 726 5.313280 AGGTATTCGCCCCATTGTTTATA 57.687 39.130 0.00 0.00 0.00 0.98
726 727 4.178956 AGGTATTCGCCCCATTGTTTAT 57.821 40.909 0.00 0.00 0.00 1.40
727 728 3.655615 AGGTATTCGCCCCATTGTTTA 57.344 42.857 0.00 0.00 0.00 2.01
728 729 2.525105 AGGTATTCGCCCCATTGTTT 57.475 45.000 0.00 0.00 0.00 2.83
729 730 3.876309 ATAGGTATTCGCCCCATTGTT 57.124 42.857 0.00 0.00 0.00 2.83
730 731 3.751518 GAATAGGTATTCGCCCCATTGT 58.248 45.455 0.00 0.00 33.54 2.71
740 741 9.754382 TTTTACTGTGGTATCGAATAGGTATTC 57.246 33.333 0.00 0.29 38.89 1.75
743 744 7.701924 CGTTTTTACTGTGGTATCGAATAGGTA 59.298 37.037 0.00 0.00 0.00 3.08
745 746 6.753279 TCGTTTTTACTGTGGTATCGAATAGG 59.247 38.462 0.00 0.00 0.00 2.57
746 747 7.745022 TCGTTTTTACTGTGGTATCGAATAG 57.255 36.000 0.00 0.00 0.00 1.73
748 749 7.041916 TGTTTCGTTTTTACTGTGGTATCGAAT 60.042 33.333 0.00 0.00 33.04 3.34
749 750 6.257411 TGTTTCGTTTTTACTGTGGTATCGAA 59.743 34.615 0.00 0.00 32.18 3.71
752 753 8.525876 GTTTTGTTTCGTTTTTACTGTGGTATC 58.474 33.333 0.00 0.00 0.00 2.24
753 754 8.027771 TGTTTTGTTTCGTTTTTACTGTGGTAT 58.972 29.630 0.00 0.00 0.00 2.73
755 756 6.214399 TGTTTTGTTTCGTTTTTACTGTGGT 58.786 32.000 0.00 0.00 0.00 4.16
763 1150 6.408325 CGTGTGTTTTGTTTTGTTTCGTTTTT 59.592 30.769 0.00 0.00 0.00 1.94
764 1151 5.896974 CGTGTGTTTTGTTTTGTTTCGTTTT 59.103 32.000 0.00 0.00 0.00 2.43
765 1152 5.424557 CGTGTGTTTTGTTTTGTTTCGTTT 58.575 33.333 0.00 0.00 0.00 3.60
792 1180 0.905337 CTGTCCGTTCTCTCCCCCTT 60.905 60.000 0.00 0.00 0.00 3.95
809 1197 2.325082 CGGTTCGGGTTGCTTCCTG 61.325 63.158 1.06 1.06 35.33 3.86
810 1198 2.032071 CGGTTCGGGTTGCTTCCT 59.968 61.111 0.00 0.00 0.00 3.36
827 1215 0.454452 GCCAATGGCGTCTTCGTTTC 60.454 55.000 9.14 0.00 39.62 2.78
842 1230 1.201647 GACTAGCGAGTGTACTGCCAA 59.798 52.381 3.45 0.00 35.45 4.52
968 1364 4.775977 AGAGCGGGGAGAGCAGCT 62.776 66.667 0.00 0.00 43.33 4.24
1414 1819 0.109319 CAAAAGCGAACGGGAATGGG 60.109 55.000 0.00 0.00 0.00 4.00
1417 1822 1.804748 GAGACAAAAGCGAACGGGAAT 59.195 47.619 0.00 0.00 0.00 3.01
1418 1823 1.223187 GAGACAAAAGCGAACGGGAA 58.777 50.000 0.00 0.00 0.00 3.97
1420 1825 1.866925 GGAGACAAAAGCGAACGGG 59.133 57.895 0.00 0.00 0.00 5.28
1423 1828 1.396815 CGAACGGAGACAAAAGCGAAC 60.397 52.381 0.00 0.00 0.00 3.95
1426 1831 0.161024 GACGAACGGAGACAAAAGCG 59.839 55.000 0.00 0.00 0.00 4.68
1427 1832 1.192534 CAGACGAACGGAGACAAAAGC 59.807 52.381 0.00 0.00 0.00 3.51
1429 1834 1.860676 CCAGACGAACGGAGACAAAA 58.139 50.000 0.00 0.00 0.00 2.44
1430 1835 0.599204 GCCAGACGAACGGAGACAAA 60.599 55.000 0.00 0.00 0.00 2.83
1431 1836 1.006571 GCCAGACGAACGGAGACAA 60.007 57.895 0.00 0.00 0.00 3.18
1435 1841 1.738099 CAAGGCCAGACGAACGGAG 60.738 63.158 5.01 0.00 0.00 4.63
1439 1845 3.423154 CGCCAAGGCCAGACGAAC 61.423 66.667 5.01 0.00 37.98 3.95
1463 1869 0.788995 CACAGCGTGAAGAGCTTCTG 59.211 55.000 11.16 4.21 44.06 3.02
1464 1870 0.948141 GCACAGCGTGAAGAGCTTCT 60.948 55.000 11.94 0.00 44.06 2.85
1471 1880 2.962827 CTGCCTGCACAGCGTGAAG 61.963 63.158 11.94 10.45 38.85 3.02
1472 1881 2.974148 CTGCCTGCACAGCGTGAA 60.974 61.111 11.94 1.54 35.23 3.18
1473 1882 4.994471 CCTGCCTGCACAGCGTGA 62.994 66.667 11.94 0.00 35.23 4.35
1474 1883 4.994471 TCCTGCCTGCACAGCGTG 62.994 66.667 0.00 4.61 36.29 5.34
1475 1884 4.996434 GTCCTGCCTGCACAGCGT 62.996 66.667 0.00 0.00 36.29 5.07
1531 1954 4.452733 CAGACGAAGCCGGACCCC 62.453 72.222 5.05 0.00 40.78 4.95
1534 1957 3.379445 TCCCAGACGAAGCCGGAC 61.379 66.667 5.05 0.00 40.78 4.79
1597 2020 3.181458 TGTTAACCAACCTGAGGTCAGAC 60.181 47.826 3.76 0.00 43.51 3.51
1600 2023 2.775384 AGTGTTAACCAACCTGAGGTCA 59.225 45.455 3.76 0.00 38.76 4.02
1641 2064 8.339344 TCTGAATTTTGCTGAAGAATATGTCA 57.661 30.769 0.00 0.00 0.00 3.58
1665 2088 2.338577 AGACTGGGCATGCTGTTATC 57.661 50.000 18.92 9.27 0.00 1.75
1668 2091 0.403271 AGAAGACTGGGCATGCTGTT 59.597 50.000 18.92 1.75 0.00 3.16
1688 2111 8.992835 AACCTTCGATAAACGTAAAATCTAGT 57.007 30.769 0.00 0.00 43.13 2.57
1697 2120 7.198390 CCTTCTATGAACCTTCGATAAACGTA 58.802 38.462 0.00 0.00 43.13 3.57
1707 2130 6.183360 GCAATTACACCCTTCTATGAACCTTC 60.183 42.308 0.00 0.00 0.00 3.46
1721 2236 1.173913 GGTCCACAGCAATTACACCC 58.826 55.000 0.00 0.00 0.00 4.61
1739 2254 3.119459 TCGAGTTCTTAGCTGCTTACAGG 60.119 47.826 7.79 0.00 44.63 4.00
1747 2262 2.338813 CGTTCGTTCGAGTTCTTAGCTG 59.661 50.000 0.00 0.00 0.00 4.24
1748 2263 2.225019 TCGTTCGTTCGAGTTCTTAGCT 59.775 45.455 0.00 0.00 34.85 3.32
1749 2264 2.578495 TCGTTCGTTCGAGTTCTTAGC 58.422 47.619 1.29 0.00 34.85 3.09
1750 2265 6.843676 TTATTCGTTCGTTCGAGTTCTTAG 57.156 37.500 5.61 0.00 40.86 2.18
1751 2266 6.636447 TGTTTATTCGTTCGTTCGAGTTCTTA 59.364 34.615 5.61 0.00 40.86 2.10
1752 2267 5.459762 TGTTTATTCGTTCGTTCGAGTTCTT 59.540 36.000 5.61 0.00 40.86 2.52
1753 2268 4.977963 TGTTTATTCGTTCGTTCGAGTTCT 59.022 37.500 5.61 0.00 40.86 3.01
1754 2269 5.241378 TGTTTATTCGTTCGTTCGAGTTC 57.759 39.130 5.61 0.00 40.86 3.01
1767 2282 4.051922 CTCTCGATTCCCCTGTTTATTCG 58.948 47.826 0.00 0.00 0.00 3.34
1783 2313 1.210413 GCAGTTCTGCGACTCTCGA 59.790 57.895 9.04 0.00 43.74 4.04
1784 2314 0.664466 TTGCAGTTCTGCGACTCTCG 60.664 55.000 17.95 0.00 43.89 4.04
1791 2321 2.624316 ACATCAATTGCAGTTCTGCG 57.376 45.000 17.95 5.85 37.69 5.18
1807 2337 3.707611 ACATTGCCCATGCTTATCAACAT 59.292 39.130 0.00 0.00 36.14 2.71
1808 2338 3.098377 ACATTGCCCATGCTTATCAACA 58.902 40.909 0.00 0.00 36.14 3.33
1809 2339 3.450578 CACATTGCCCATGCTTATCAAC 58.549 45.455 0.00 0.00 36.14 3.18
1838 2369 6.371548 TGTGCTCTGGTATTAAAACTAAGCAG 59.628 38.462 0.00 0.00 37.85 4.24
1853 2384 1.069765 CGGTTCACTGTGCTCTGGT 59.930 57.895 2.12 0.00 0.00 4.00
1854 2385 0.532862 AACGGTTCACTGTGCTCTGG 60.533 55.000 2.12 0.00 35.26 3.86
1855 2386 2.148916 TAACGGTTCACTGTGCTCTG 57.851 50.000 2.12 6.18 35.26 3.35
1856 2387 2.480845 GTTAACGGTTCACTGTGCTCT 58.519 47.619 2.12 0.00 35.26 4.09
1857 2388 1.191647 CGTTAACGGTTCACTGTGCTC 59.808 52.381 20.24 0.00 35.26 4.26
1927 2463 2.512896 CCTGCAGCCTATGGACCC 59.487 66.667 8.66 0.00 0.00 4.46
1928 2464 2.203266 GCCTGCAGCCTATGGACC 60.203 66.667 8.66 0.00 34.35 4.46
1938 2474 2.770164 AACTAACCTACAGCCTGCAG 57.230 50.000 6.78 6.78 0.00 4.41
1941 2477 8.516234 CATCTACTATAACTAACCTACAGCCTG 58.484 40.741 0.00 0.00 0.00 4.85
1990 2526 9.331282 GGATGCAAAATATAGTCACTCTAAAGT 57.669 33.333 0.00 0.00 35.60 2.66
2068 2604 6.254157 GTGCATAGGTCATTGTTAGCATTTTG 59.746 38.462 0.00 0.00 32.98 2.44
2069 2605 6.153340 AGTGCATAGGTCATTGTTAGCATTTT 59.847 34.615 0.00 0.00 32.98 1.82
2070 2606 5.653769 AGTGCATAGGTCATTGTTAGCATTT 59.346 36.000 0.00 0.00 32.98 2.32
2071 2607 5.195940 AGTGCATAGGTCATTGTTAGCATT 58.804 37.500 0.00 0.00 32.98 3.56
2072 2608 4.785301 AGTGCATAGGTCATTGTTAGCAT 58.215 39.130 0.00 0.00 32.98 3.79
2073 2609 4.220693 AGTGCATAGGTCATTGTTAGCA 57.779 40.909 0.00 0.00 0.00 3.49
2074 2610 5.335127 CAAAGTGCATAGGTCATTGTTAGC 58.665 41.667 0.00 0.00 0.00 3.09
2075 2611 5.415701 ACCAAAGTGCATAGGTCATTGTTAG 59.584 40.000 0.00 0.00 0.00 2.34
2076 2612 5.321102 ACCAAAGTGCATAGGTCATTGTTA 58.679 37.500 0.00 0.00 0.00 2.41
2077 2613 4.151883 ACCAAAGTGCATAGGTCATTGTT 58.848 39.130 0.00 0.00 0.00 2.83
2078 2614 3.766545 ACCAAAGTGCATAGGTCATTGT 58.233 40.909 0.00 0.00 0.00 2.71
2105 2641 9.689075 CATGACTAACACGTAAATGATGTTTAG 57.311 33.333 0.00 0.00 37.68 1.85
2174 3526 5.982516 GGTAGCATACTATCTGCATATCTGC 59.017 44.000 0.00 0.00 44.58 4.26
2346 3698 3.071479 TGGTGCTTCGATACTCAAAACC 58.929 45.455 0.00 0.00 0.00 3.27
2406 3758 3.764237 TTCTGACCAACCAGTAAGTCC 57.236 47.619 0.00 0.00 35.71 3.85
2410 3762 4.497291 ACACTTTCTGACCAACCAGTAA 57.503 40.909 0.00 0.00 35.71 2.24
2442 3794 2.262423 AAGAAGCACTCACTGGGTTC 57.738 50.000 0.00 0.00 40.75 3.62
2448 3800 3.838244 TTGGTGTAAGAAGCACTCACT 57.162 42.857 0.00 0.00 37.07 3.41
2490 3842 2.019249 AGCGTGTACATAGCCGACTTA 58.981 47.619 18.63 0.00 0.00 2.24
2492 3844 0.815734 AAGCGTGTACATAGCCGACT 59.184 50.000 18.63 8.14 0.00 4.18
2524 3887 6.734104 TTGGAATGAAAACAAAAACACTGG 57.266 33.333 0.00 0.00 0.00 4.00
2525 3888 7.909641 GGAATTGGAATGAAAACAAAAACACTG 59.090 33.333 0.00 0.00 0.00 3.66
2526 3889 7.066887 GGGAATTGGAATGAAAACAAAAACACT 59.933 33.333 0.00 0.00 0.00 3.55
2527 3890 7.148171 TGGGAATTGGAATGAAAACAAAAACAC 60.148 33.333 0.00 0.00 0.00 3.32
2528 3891 6.886459 TGGGAATTGGAATGAAAACAAAAACA 59.114 30.769 0.00 0.00 0.00 2.83
2529 3892 7.326968 TGGGAATTGGAATGAAAACAAAAAC 57.673 32.000 0.00 0.00 0.00 2.43
2581 3965 2.725221 ATCAGGATCAGAAACAGGCC 57.275 50.000 0.00 0.00 0.00 5.19
2609 3993 5.215252 TCATTTCCTATGCTAGTGCTACC 57.785 43.478 0.00 0.00 40.48 3.18
2616 4001 7.035840 AGCACATTTTCATTTCCTATGCTAG 57.964 36.000 0.00 0.00 39.03 3.42
2623 4008 6.017400 CTGTGTAGCACATTTTCATTTCCT 57.983 37.500 2.25 0.00 43.71 3.36
2665 4050 4.892934 ACACTTGGTCATGGTTAATTGTGT 59.107 37.500 0.00 0.00 0.00 3.72
2693 4078 1.262417 TCTGTTCCGCATACCAGTGA 58.738 50.000 0.00 0.00 0.00 3.41
2697 4082 4.631131 CATAGAATCTGTTCCGCATACCA 58.369 43.478 0.00 0.00 34.81 3.25
2705 4090 5.819901 AGTTGCTTAGCATAGAATCTGTTCC 59.180 40.000 8.05 0.00 38.76 3.62
2706 4091 6.917217 AGTTGCTTAGCATAGAATCTGTTC 57.083 37.500 8.05 0.00 38.76 3.18
3042 4434 4.153117 AGTTGCAGCTGAACTAATTTCTCG 59.847 41.667 20.43 0.00 34.97 4.04
3311 4712 3.825908 ACCACCAACCTGAATATGGTT 57.174 42.857 0.00 0.00 44.92 3.67
3492 4893 8.914328 TGAATTTGCATCAAACATGTGTATAG 57.086 30.769 0.00 0.00 36.13 1.31
3520 4921 5.428184 TTGGTGGTTTCCAATCAAGTTTT 57.572 34.783 0.00 0.00 41.79 2.43
3521 4922 5.428184 TTTGGTGGTTTCCAATCAAGTTT 57.572 34.783 0.00 0.00 45.30 2.66
3631 5032 6.551227 ACAGATGCTATAATGTACTGGAGTGA 59.449 38.462 0.00 0.00 0.00 3.41
3632 5033 6.753180 ACAGATGCTATAATGTACTGGAGTG 58.247 40.000 0.00 0.00 0.00 3.51
3704 5105 7.672983 TGAATTACTGCTCTGTTTCTTAAGG 57.327 36.000 1.85 0.00 0.00 2.69
3753 5154 7.229506 AGGAACAGGAAAGACAAGTTTATTCTG 59.770 37.037 0.00 0.00 0.00 3.02
3764 5165 5.779241 ATATGGAAGGAACAGGAAAGACA 57.221 39.130 0.00 0.00 0.00 3.41
3791 5192 8.810652 AAACGTGTCTAACAAATGCATTTTAT 57.189 26.923 21.95 15.34 0.00 1.40
4013 5414 0.865769 GTTGCTGTAACACGGGTGAG 59.134 55.000 5.71 0.00 39.16 3.51
4048 5450 3.198872 GAGTACCTTAGCAGCCATCAAC 58.801 50.000 0.00 0.00 0.00 3.18
4310 5712 0.110509 GCGCACATAAGGCATGATCG 60.111 55.000 0.30 0.00 38.10 3.69
4312 5714 0.949397 CAGCGCACATAAGGCATGAT 59.051 50.000 11.47 0.00 38.10 2.45
4371 5780 3.949113 TGTCACACTATGTAGCGGTATCA 59.051 43.478 0.00 0.00 0.00 2.15
4372 5781 4.563337 TGTCACACTATGTAGCGGTATC 57.437 45.455 0.00 0.00 0.00 2.24
4378 5787 7.770801 TGATGTTATTGTCACACTATGTAGC 57.229 36.000 0.00 0.00 0.00 3.58
4382 5791 9.494479 GACATTTGATGTTATTGTCACACTATG 57.506 33.333 0.00 0.00 45.03 2.23
4399 5816 5.180117 GCATATCTAACGGCTGACATTTGAT 59.820 40.000 0.00 0.00 0.00 2.57
4429 6178 9.170734 CTCTGAGATGAAAACTTTATCCAATGA 57.829 33.333 0.00 0.00 0.00 2.57
4460 6209 7.307751 GGTTCAATTAAAAGATCACGTGTCAGA 60.308 37.037 16.51 0.00 0.00 3.27
4504 6253 7.402054 TGGGAAAAAGATGCTTCTAGAATACA 58.598 34.615 5.44 8.14 0.00 2.29
4532 6281 9.844257 CCTCTAATTTTAGAATCAGATCCTTGT 57.156 33.333 1.97 0.00 39.15 3.16
4557 6306 6.628175 GCCCAACTCTCTAAAATCCAAATTCC 60.628 42.308 0.00 0.00 0.00 3.01
4562 6311 3.563479 GGGCCCAACTCTCTAAAATCCAA 60.563 47.826 19.95 0.00 0.00 3.53
4594 6343 9.140286 TCTCGATATTTTATTTCCTTCTATGCG 57.860 33.333 0.00 0.00 0.00 4.73
4599 6348 9.342308 TGCATTCTCGATATTTTATTTCCTTCT 57.658 29.630 0.00 0.00 0.00 2.85
4614 6363 3.733709 GGGGGAATGCATTCTCGAT 57.266 52.632 32.48 2.42 38.17 3.59
4640 6389 9.556030 CATGCTAAGCAAGTCATCAAATATATG 57.444 33.333 0.00 0.00 43.62 1.78
4641 6390 9.293404 ACATGCTAAGCAAGTCATCAAATATAT 57.707 29.630 0.00 0.00 43.62 0.86
4642 6391 8.681486 ACATGCTAAGCAAGTCATCAAATATA 57.319 30.769 0.00 0.00 43.62 0.86
4665 6578 2.436417 GAGGGAGCAGCAAATTGTACA 58.564 47.619 0.00 0.00 0.00 2.90
4678 6595 3.945640 TTAATTTGGGTAGGAGGGAGC 57.054 47.619 0.00 0.00 0.00 4.70
4679 6596 5.828328 GTCAATTAATTTGGGTAGGAGGGAG 59.172 44.000 0.00 0.00 35.92 4.30
4680 6597 5.254267 TGTCAATTAATTTGGGTAGGAGGGA 59.746 40.000 0.00 0.00 35.92 4.20
4681 6598 5.359860 GTGTCAATTAATTTGGGTAGGAGGG 59.640 44.000 0.00 0.00 35.92 4.30
4682 6599 6.095440 CAGTGTCAATTAATTTGGGTAGGAGG 59.905 42.308 0.00 0.00 35.92 4.30
4683 6600 6.884295 TCAGTGTCAATTAATTTGGGTAGGAG 59.116 38.462 0.00 0.00 35.92 3.69
4684 6601 6.657541 GTCAGTGTCAATTAATTTGGGTAGGA 59.342 38.462 0.00 0.00 35.92 2.94
4685 6602 6.432783 TGTCAGTGTCAATTAATTTGGGTAGG 59.567 38.462 0.00 0.00 35.92 3.18
4686 6603 7.447374 TGTCAGTGTCAATTAATTTGGGTAG 57.553 36.000 0.00 0.00 35.92 3.18
4687 6604 7.825331 TTGTCAGTGTCAATTAATTTGGGTA 57.175 32.000 0.00 0.00 35.92 3.69
4688 6605 6.723298 TTGTCAGTGTCAATTAATTTGGGT 57.277 33.333 0.00 0.00 35.92 4.51
4689 6606 7.209475 ACTTTGTCAGTGTCAATTAATTTGGG 58.791 34.615 3.62 0.00 33.14 4.12
4690 6607 9.180678 GTACTTTGTCAGTGTCAATTAATTTGG 57.819 33.333 3.62 0.00 35.97 3.28
4691 6608 9.729023 TGTACTTTGTCAGTGTCAATTAATTTG 57.271 29.630 3.62 0.00 35.97 2.32
4693 6610 9.730420 GTTGTACTTTGTCAGTGTCAATTAATT 57.270 29.630 3.62 0.00 35.97 1.40
4694 6611 9.120538 AGTTGTACTTTGTCAGTGTCAATTAAT 57.879 29.630 3.62 0.00 35.97 1.40
4695 6612 8.500753 AGTTGTACTTTGTCAGTGTCAATTAA 57.499 30.769 3.62 0.00 35.97 1.40
4696 6613 8.500753 AAGTTGTACTTTGTCAGTGTCAATTA 57.499 30.769 3.62 0.00 34.11 1.40
4697 6614 7.391148 AAGTTGTACTTTGTCAGTGTCAATT 57.609 32.000 3.62 0.00 34.11 2.32
4698 6615 7.391148 AAAGTTGTACTTTGTCAGTGTCAAT 57.609 32.000 3.62 0.00 45.83 2.57
4699 6616 6.811253 AAAGTTGTACTTTGTCAGTGTCAA 57.189 33.333 4.14 0.00 45.83 3.18
4700 6617 9.037737 GTATAAAGTTGTACTTTGTCAGTGTCA 57.962 33.333 13.52 0.00 46.83 3.58
4701 6618 9.257651 AGTATAAAGTTGTACTTTGTCAGTGTC 57.742 33.333 13.52 0.00 46.83 3.67
4744 6661 9.964354 TCCTTTCGATCCATATTAATTGATGAT 57.036 29.630 0.00 0.00 0.00 2.45
4745 6662 9.219603 GTCCTTTCGATCCATATTAATTGATGA 57.780 33.333 0.00 0.00 0.00 2.92
4746 6663 9.224267 AGTCCTTTCGATCCATATTAATTGATG 57.776 33.333 0.00 0.00 0.00 3.07
4748 6665 9.929180 CTAGTCCTTTCGATCCATATTAATTGA 57.071 33.333 0.00 0.00 0.00 2.57
4749 6666 9.712305 ACTAGTCCTTTCGATCCATATTAATTG 57.288 33.333 0.00 0.00 0.00 2.32
4752 6669 9.584008 ACTACTAGTCCTTTCGATCCATATTAA 57.416 33.333 0.00 0.00 0.00 1.40
4753 6670 9.584008 AACTACTAGTCCTTTCGATCCATATTA 57.416 33.333 0.00 0.00 0.00 0.98
4754 6671 8.480133 AACTACTAGTCCTTTCGATCCATATT 57.520 34.615 0.00 0.00 0.00 1.28
4755 6672 8.480133 AAACTACTAGTCCTTTCGATCCATAT 57.520 34.615 0.00 0.00 0.00 1.78
4756 6673 7.558807 TGAAACTACTAGTCCTTTCGATCCATA 59.441 37.037 0.00 0.00 0.00 2.74
4757 6674 6.380274 TGAAACTACTAGTCCTTTCGATCCAT 59.620 38.462 0.00 0.00 0.00 3.41
4758 6675 5.713389 TGAAACTACTAGTCCTTTCGATCCA 59.287 40.000 0.00 0.00 0.00 3.41
4759 6676 6.205101 TGAAACTACTAGTCCTTTCGATCC 57.795 41.667 0.00 0.00 0.00 3.36
4760 6677 7.536855 TCTTGAAACTACTAGTCCTTTCGATC 58.463 38.462 0.00 0.00 0.00 3.69
4761 6678 7.393796 TCTCTTGAAACTACTAGTCCTTTCGAT 59.606 37.037 0.00 0.00 0.00 3.59
4762 6679 6.713903 TCTCTTGAAACTACTAGTCCTTTCGA 59.286 38.462 0.00 6.78 0.00 3.71
4763 6680 6.910995 TCTCTTGAAACTACTAGTCCTTTCG 58.089 40.000 0.00 0.00 0.00 3.46
4764 6681 9.713713 AAATCTCTTGAAACTACTAGTCCTTTC 57.286 33.333 0.00 8.33 0.00 2.62
4767 6684 8.751242 GGTAAATCTCTTGAAACTACTAGTCCT 58.249 37.037 0.00 0.00 0.00 3.85
4768 6685 8.751242 AGGTAAATCTCTTGAAACTACTAGTCC 58.249 37.037 0.00 0.00 0.00 3.85
4770 6687 9.930693 CAAGGTAAATCTCTTGAAACTACTAGT 57.069 33.333 0.00 0.00 41.94 2.57
4859 6776 4.726416 TCGTTTCAGTTCGTATGTAGTCC 58.274 43.478 0.00 0.00 0.00 3.85
4860 6777 5.625251 TCTCGTTTCAGTTCGTATGTAGTC 58.375 41.667 0.00 0.00 0.00 2.59
4870 6787 5.163893 TGTGTTTGTTCTCTCGTTTCAGTTC 60.164 40.000 0.00 0.00 0.00 3.01
4871 6788 4.693566 TGTGTTTGTTCTCTCGTTTCAGTT 59.306 37.500 0.00 0.00 0.00 3.16
4879 6796 4.317139 CGTTGTAGTGTGTTTGTTCTCTCG 60.317 45.833 0.00 0.00 0.00 4.04
4880 6797 4.565564 ACGTTGTAGTGTGTTTGTTCTCTC 59.434 41.667 0.00 0.00 0.00 3.20
4881 6798 4.328983 CACGTTGTAGTGTGTTTGTTCTCT 59.671 41.667 0.00 0.00 37.35 3.10
4882 6799 4.574759 CACGTTGTAGTGTGTTTGTTCTC 58.425 43.478 0.00 0.00 37.35 2.87
4883 6800 4.593597 CACGTTGTAGTGTGTTTGTTCT 57.406 40.909 0.00 0.00 37.35 3.01
4893 6810 6.469275 CAGATGTATGTAGACACGTTGTAGTG 59.531 42.308 0.00 0.00 46.83 2.74
4898 6815 7.525688 AAATCAGATGTATGTAGACACGTTG 57.474 36.000 0.00 0.00 30.52 4.10
4935 6852 9.078990 TCTCCGTTCACTATTATATGATGTTCT 57.921 33.333 0.00 0.00 0.00 3.01
4936 6853 9.347934 CTCTCCGTTCACTATTATATGATGTTC 57.652 37.037 0.00 0.00 0.00 3.18
4943 6860 9.796180 AGAACTACTCTCCGTTCACTATTATAT 57.204 33.333 0.00 0.00 41.40 0.86
4952 6869 4.004314 CTCTCAGAACTACTCTCCGTTCA 58.996 47.826 0.00 0.00 41.40 3.18
4957 6874 5.128827 TCTCTCTCTCTCAGAACTACTCTCC 59.871 48.000 0.00 0.00 29.07 3.71
4984 6903 7.581213 TGGAGAATTATGTTGTGTTCACTTT 57.419 32.000 4.59 0.00 0.00 2.66
4994 6913 7.226441 TGGTCCAGATATGGAGAATTATGTTG 58.774 38.462 9.95 0.00 38.88 3.33
5006 6925 4.141642 TGTCATGAGTTGGTCCAGATATGG 60.142 45.833 0.00 0.00 0.00 2.74
5007 6926 5.027293 TGTCATGAGTTGGTCCAGATATG 57.973 43.478 0.00 0.00 0.00 1.78
5055 6974 9.967346 GCAGTTGTGACATAAGTATATCTAGAA 57.033 33.333 0.00 0.00 0.00 2.10
5057 6976 9.619316 GAGCAGTTGTGACATAAGTATATCTAG 57.381 37.037 0.00 0.00 0.00 2.43
5059 6978 7.069950 TGGAGCAGTTGTGACATAAGTATATCT 59.930 37.037 0.00 0.00 0.00 1.98
5060 6979 7.169982 GTGGAGCAGTTGTGACATAAGTATATC 59.830 40.741 0.00 0.00 0.00 1.63
5062 6981 6.338146 GTGGAGCAGTTGTGACATAAGTATA 58.662 40.000 0.00 0.00 0.00 1.47
5063 6982 5.178797 GTGGAGCAGTTGTGACATAAGTAT 58.821 41.667 0.00 0.00 0.00 2.12
5064 6983 4.566004 GTGGAGCAGTTGTGACATAAGTA 58.434 43.478 0.00 0.00 0.00 2.24
5065 6984 3.403038 GTGGAGCAGTTGTGACATAAGT 58.597 45.455 0.00 0.00 0.00 2.24
5066 6985 2.413112 CGTGGAGCAGTTGTGACATAAG 59.587 50.000 0.00 0.00 0.00 1.73
5069 6988 0.603707 CCGTGGAGCAGTTGTGACAT 60.604 55.000 0.00 0.00 0.00 3.06
5070 6989 1.227527 CCGTGGAGCAGTTGTGACA 60.228 57.895 0.00 0.00 0.00 3.58
5071 6990 0.946221 CTCCGTGGAGCAGTTGTGAC 60.946 60.000 2.38 0.00 35.31 3.67
5072 6991 1.112916 TCTCCGTGGAGCAGTTGTGA 61.113 55.000 11.17 0.00 41.71 3.58
5073 6992 0.249868 TTCTCCGTGGAGCAGTTGTG 60.250 55.000 11.17 0.00 41.71 3.33
5112 7054 0.318784 ACTTCGACCGCACTGAACTC 60.319 55.000 0.00 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.