Multiple sequence alignment - TraesCS1B01G436300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G436300 chr1B 100.000 3578 0 0 1 3578 659722648 659726225 0.000000e+00 6608.0
1 TraesCS1B01G436300 chr1B 80.519 1386 222 40 1106 2464 664776698 664778062 0.000000e+00 1020.0
2 TraesCS1B01G436300 chr1B 76.552 580 38 50 2702 3207 659731442 659731997 9.990000e-56 228.0
3 TraesCS1B01G436300 chr1B 94.326 141 6 2 3242 3382 102627865 102627727 7.780000e-52 215.0
4 TraesCS1B01G436300 chr1B 81.333 75 7 5 3212 3282 76836169 76836240 2.000000e-03 54.7
5 TraesCS1B01G436300 chr1D 89.168 3259 163 88 73 3198 474374094 474377295 0.000000e+00 3888.0
6 TraesCS1B01G436300 chr1D 82.262 1229 185 27 1254 2464 477189233 477190446 0.000000e+00 1031.0
7 TraesCS1B01G436300 chr1A 87.891 2907 179 89 386 3201 568730889 568728065 0.000000e+00 3258.0
8 TraesCS1B01G436300 chr1A 80.243 1483 225 56 1017 2464 573242389 573243838 0.000000e+00 1053.0
9 TraesCS1B01G436300 chr3D 91.079 751 31 18 733 1460 255525742 255526479 0.000000e+00 983.0
10 TraesCS1B01G436300 chr3D 94.545 55 2 1 162 216 25192240 25192187 2.290000e-12 84.2
11 TraesCS1B01G436300 chr7A 78.610 1468 262 45 1038 2476 545934306 545935750 0.000000e+00 924.0
12 TraesCS1B01G436300 chr7A 88.889 63 6 1 153 214 538573567 538573505 3.830000e-10 76.8
13 TraesCS1B01G436300 chr7B 78.464 1458 260 47 1050 2477 470837020 470835587 0.000000e+00 904.0
14 TraesCS1B01G436300 chr7B 98.438 128 2 0 3255 3382 281384031 281384158 3.590000e-55 226.0
15 TraesCS1B01G436300 chr7B 97.015 134 2 2 3250 3383 88278776 88278645 1.290000e-54 224.0
16 TraesCS1B01G436300 chr7B 96.875 64 2 0 3515 3578 211421939 211421876 1.360000e-19 108.0
17 TraesCS1B01G436300 chr7B 96.721 61 2 0 3517 3577 381917928 381917868 6.320000e-18 102.0
18 TraesCS1B01G436300 chr7B 96.721 61 2 0 3517 3577 381920423 381920363 6.320000e-18 102.0
19 TraesCS1B01G436300 chr7B 96.721 61 2 0 3517 3577 381942474 381942414 6.320000e-18 102.0
20 TraesCS1B01G436300 chr7D 78.437 1433 255 46 1072 2476 451187828 451186422 0.000000e+00 885.0
21 TraesCS1B01G436300 chr7D 95.948 543 14 3 919 1460 400941703 400942238 0.000000e+00 874.0
22 TraesCS1B01G436300 chr4D 81.241 725 112 21 1820 2532 405028915 405029627 6.710000e-157 564.0
23 TraesCS1B01G436300 chr4D 94.964 139 6 1 3255 3392 23352725 23352587 2.160000e-52 217.0
24 TraesCS1B01G436300 chr4D 81.169 154 18 9 211 363 65076884 65076741 2.920000e-21 113.0
25 TraesCS1B01G436300 chr4A 78.757 692 133 14 1780 2464 17388114 17387430 5.450000e-123 451.0
26 TraesCS1B01G436300 chr4A 75.036 697 146 27 1106 1788 62537963 62538645 7.510000e-77 298.0
27 TraesCS1B01G436300 chr4A 96.296 135 5 0 3248 3382 477881890 477881756 4.650000e-54 222.0
28 TraesCS1B01G436300 chr4A 96.825 63 2 0 3516 3578 63542922 63542860 4.890000e-19 106.0
29 TraesCS1B01G436300 chr4A 89.062 64 4 3 149 212 466112489 466112549 3.830000e-10 76.8
30 TraesCS1B01G436300 chr6B 76.457 858 168 25 1614 2457 573414556 573413719 5.490000e-118 435.0
31 TraesCS1B01G436300 chr6B 96.970 66 2 0 3512 3577 714085932 714085867 1.050000e-20 111.0
32 TraesCS1B01G436300 chr6B 96.721 61 2 0 3517 3577 4481696 4481636 6.320000e-18 102.0
33 TraesCS1B01G436300 chr5A 87.500 344 19 10 2925 3251 625327092 625327428 3.370000e-100 375.0
34 TraesCS1B01G436300 chrUn 96.269 134 5 0 3251 3384 87981690 87981823 1.670000e-53 220.0
35 TraesCS1B01G436300 chrUn 93.056 144 9 1 3250 3392 52994570 52994427 3.620000e-50 209.0
36 TraesCS1B01G436300 chrUn 96.721 61 2 0 3517 3577 136329273 136329333 6.320000e-18 102.0
37 TraesCS1B01G436300 chr2B 95.588 136 5 1 3247 3382 603917201 603917335 2.160000e-52 217.0
38 TraesCS1B01G436300 chr6D 93.151 146 7 2 3251 3396 247794798 247794656 1.010000e-50 211.0
39 TraesCS1B01G436300 chr5D 95.238 63 3 0 3516 3578 426477385 426477323 2.270000e-17 100.0
40 TraesCS1B01G436300 chr5D 95.918 49 1 1 162 210 409448107 409448154 1.070000e-10 78.7
41 TraesCS1B01G436300 chr3A 98.077 52 0 1 163 214 57197919 57197869 4.920000e-14 89.8
42 TraesCS1B01G436300 chr5B 96.078 51 2 0 163 213 576087954 576088004 2.290000e-12 84.2
43 TraesCS1B01G436300 chr5B 90.323 62 5 1 152 213 586716897 586716837 2.960000e-11 80.5
44 TraesCS1B01G436300 chr3B 85.507 69 6 4 151 215 263985548 263985480 6.410000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G436300 chr1B 659722648 659726225 3577 False 6608 6608 100.000 1 3578 1 chr1B.!!$F2 3577
1 TraesCS1B01G436300 chr1B 664776698 664778062 1364 False 1020 1020 80.519 1106 2464 1 chr1B.!!$F4 1358
2 TraesCS1B01G436300 chr1B 659731442 659731997 555 False 228 228 76.552 2702 3207 1 chr1B.!!$F3 505
3 TraesCS1B01G436300 chr1D 474374094 474377295 3201 False 3888 3888 89.168 73 3198 1 chr1D.!!$F1 3125
4 TraesCS1B01G436300 chr1D 477189233 477190446 1213 False 1031 1031 82.262 1254 2464 1 chr1D.!!$F2 1210
5 TraesCS1B01G436300 chr1A 568728065 568730889 2824 True 3258 3258 87.891 386 3201 1 chr1A.!!$R1 2815
6 TraesCS1B01G436300 chr1A 573242389 573243838 1449 False 1053 1053 80.243 1017 2464 1 chr1A.!!$F1 1447
7 TraesCS1B01G436300 chr3D 255525742 255526479 737 False 983 983 91.079 733 1460 1 chr3D.!!$F1 727
8 TraesCS1B01G436300 chr7A 545934306 545935750 1444 False 924 924 78.610 1038 2476 1 chr7A.!!$F1 1438
9 TraesCS1B01G436300 chr7B 470835587 470837020 1433 True 904 904 78.464 1050 2477 1 chr7B.!!$R4 1427
10 TraesCS1B01G436300 chr7D 451186422 451187828 1406 True 885 885 78.437 1072 2476 1 chr7D.!!$R1 1404
11 TraesCS1B01G436300 chr7D 400941703 400942238 535 False 874 874 95.948 919 1460 1 chr7D.!!$F1 541
12 TraesCS1B01G436300 chr4D 405028915 405029627 712 False 564 564 81.241 1820 2532 1 chr4D.!!$F1 712
13 TraesCS1B01G436300 chr4A 17387430 17388114 684 True 451 451 78.757 1780 2464 1 chr4A.!!$R1 684
14 TraesCS1B01G436300 chr4A 62537963 62538645 682 False 298 298 75.036 1106 1788 1 chr4A.!!$F1 682
15 TraesCS1B01G436300 chr6B 573413719 573414556 837 True 435 435 76.457 1614 2457 1 chr6B.!!$R2 843

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
196 200 0.404040 TCCATGGAGGCCGTCTTTTT 59.596 50.0 11.44 0.00 37.29 1.94 F
336 342 0.464013 TCAAAAACCGGCCTCGTTGA 60.464 50.0 0.00 1.61 33.95 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2567 2689 1.302752 TGCTGCTGCTACTTGTGGG 60.303 57.895 17.00 0.0 40.48 4.61 R
2705 2831 0.107508 CACCACGCCTGGAGATTCAT 60.108 55.000 8.88 0.0 40.55 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 6.783708 AAACACATTAGGTTTTTGGTGAGA 57.216 33.333 0.00 0.00 35.01 3.27
40 41 5.767816 ACACATTAGGTTTTTGGTGAGAC 57.232 39.130 0.00 0.00 0.00 3.36
41 42 5.445964 ACACATTAGGTTTTTGGTGAGACT 58.554 37.500 0.00 0.00 0.00 3.24
42 43 5.299279 ACACATTAGGTTTTTGGTGAGACTG 59.701 40.000 0.00 0.00 0.00 3.51
43 44 4.827284 ACATTAGGTTTTTGGTGAGACTGG 59.173 41.667 0.00 0.00 0.00 4.00
44 45 4.781775 TTAGGTTTTTGGTGAGACTGGA 57.218 40.909 0.00 0.00 0.00 3.86
45 46 3.884037 AGGTTTTTGGTGAGACTGGAT 57.116 42.857 0.00 0.00 0.00 3.41
46 47 4.184649 AGGTTTTTGGTGAGACTGGATT 57.815 40.909 0.00 0.00 0.00 3.01
47 48 3.891366 AGGTTTTTGGTGAGACTGGATTG 59.109 43.478 0.00 0.00 0.00 2.67
48 49 3.636764 GGTTTTTGGTGAGACTGGATTGT 59.363 43.478 0.00 0.00 0.00 2.71
49 50 4.099419 GGTTTTTGGTGAGACTGGATTGTT 59.901 41.667 0.00 0.00 0.00 2.83
50 51 5.395214 GGTTTTTGGTGAGACTGGATTGTTT 60.395 40.000 0.00 0.00 0.00 2.83
51 52 5.930837 TTTTGGTGAGACTGGATTGTTTT 57.069 34.783 0.00 0.00 0.00 2.43
52 53 5.930837 TTTGGTGAGACTGGATTGTTTTT 57.069 34.783 0.00 0.00 0.00 1.94
53 54 5.514274 TTGGTGAGACTGGATTGTTTTTC 57.486 39.130 0.00 0.00 0.00 2.29
54 55 4.792068 TGGTGAGACTGGATTGTTTTTCT 58.208 39.130 0.00 0.00 0.00 2.52
55 56 4.821805 TGGTGAGACTGGATTGTTTTTCTC 59.178 41.667 0.00 0.00 0.00 2.87
56 57 5.066593 GGTGAGACTGGATTGTTTTTCTCT 58.933 41.667 0.00 0.00 32.38 3.10
57 58 5.180304 GGTGAGACTGGATTGTTTTTCTCTC 59.820 44.000 0.00 0.00 32.38 3.20
58 59 4.991056 TGAGACTGGATTGTTTTTCTCTCG 59.009 41.667 0.00 0.00 32.38 4.04
59 60 4.319177 AGACTGGATTGTTTTTCTCTCGG 58.681 43.478 0.00 0.00 0.00 4.63
60 61 4.040461 AGACTGGATTGTTTTTCTCTCGGA 59.960 41.667 0.00 0.00 0.00 4.55
61 62 4.319177 ACTGGATTGTTTTTCTCTCGGAG 58.681 43.478 0.00 0.00 0.00 4.63
62 63 3.674997 TGGATTGTTTTTCTCTCGGAGG 58.325 45.455 4.96 0.00 0.00 4.30
63 64 3.010420 GGATTGTTTTTCTCTCGGAGGG 58.990 50.000 4.96 0.81 0.00 4.30
64 65 3.307480 GGATTGTTTTTCTCTCGGAGGGA 60.307 47.826 2.74 2.74 0.00 4.20
65 66 4.518249 GATTGTTTTTCTCTCGGAGGGAT 58.482 43.478 8.70 0.00 0.00 3.85
66 67 5.396436 GGATTGTTTTTCTCTCGGAGGGATA 60.396 44.000 8.70 0.50 0.00 2.59
67 68 5.492855 TTGTTTTTCTCTCGGAGGGATAA 57.507 39.130 8.70 7.56 0.00 1.75
68 69 5.492855 TGTTTTTCTCTCGGAGGGATAAA 57.507 39.130 16.42 16.42 0.00 1.40
69 70 5.243207 TGTTTTTCTCTCGGAGGGATAAAC 58.757 41.667 30.71 30.71 0.00 2.01
70 71 5.221762 TGTTTTTCTCTCGGAGGGATAAACA 60.222 40.000 33.65 33.65 0.00 2.83
71 72 5.693769 TTTTCTCTCGGAGGGATAAACAT 57.306 39.130 8.70 0.00 0.00 2.71
74 75 6.801718 TTCTCTCGGAGGGATAAACATTTA 57.198 37.500 8.70 0.00 0.00 1.40
95 96 3.100545 CGCAAGTTCATGGGGCTAT 57.899 52.632 0.00 0.00 0.00 2.97
122 126 7.522374 CAGTTGTATAGTCTTTTCTCAAAGGC 58.478 38.462 0.00 0.00 43.92 4.35
137 141 2.464157 AAGGCTACAGCTCAGTGAAC 57.536 50.000 0.54 0.00 41.70 3.18
138 142 1.638529 AGGCTACAGCTCAGTGAACT 58.361 50.000 0.54 0.00 41.70 3.01
196 200 0.404040 TCCATGGAGGCCGTCTTTTT 59.596 50.000 11.44 0.00 37.29 1.94
305 311 9.925268 GTACGTAAAAATATGAATTTGGACGAT 57.075 29.630 17.51 9.32 41.72 3.73
329 335 4.884458 TGAAATTTTTCAAAAACCGGCC 57.116 36.364 0.00 0.00 43.62 6.13
332 338 2.211353 TTTTTCAAAAACCGGCCTCG 57.789 45.000 0.00 0.00 0.00 4.63
336 342 0.464013 TCAAAAACCGGCCTCGTTGA 60.464 50.000 0.00 1.61 33.95 3.18
343 349 2.815647 GGCCTCGTTGAAGCTCGG 60.816 66.667 0.00 0.00 0.00 4.63
353 359 0.606401 TGAAGCTCGGCCTCCAAAAG 60.606 55.000 0.00 0.00 0.00 2.27
355 361 2.751837 GCTCGGCCTCCAAAAGGG 60.752 66.667 0.00 0.00 46.32 3.95
396 428 4.394795 CGCTTTCTTACCTTCAAATCACG 58.605 43.478 0.00 0.00 0.00 4.35
413 445 6.743575 AATCACGCCTAGGAATAATTATGC 57.256 37.500 14.75 0.00 0.00 3.14
416 448 3.262420 CGCCTAGGAATAATTATGCGCT 58.738 45.455 14.75 6.28 34.06 5.92
444 479 7.815398 TGTATGAGCAATAGCAAAACAATTG 57.185 32.000 3.24 3.24 45.49 2.32
539 578 2.942376 TGTGCATGGCGGATAAAAGTAG 59.058 45.455 0.00 0.00 0.00 2.57
542 581 4.755123 GTGCATGGCGGATAAAAGTAGTAT 59.245 41.667 0.00 0.00 0.00 2.12
543 582 5.929992 GTGCATGGCGGATAAAAGTAGTATA 59.070 40.000 0.00 0.00 0.00 1.47
544 583 6.594159 GTGCATGGCGGATAAAAGTAGTATAT 59.406 38.462 0.00 0.00 0.00 0.86
586 625 6.667007 AAAAGAAAACCAGCAAAATCAGTG 57.333 33.333 0.00 0.00 0.00 3.66
601 640 2.034879 AGTGACCGAAATGCCAGCG 61.035 57.895 0.00 0.00 0.00 5.18
664 714 1.296392 GCCCCTGCAAAATGGAACC 59.704 57.895 0.00 0.00 37.47 3.62
835 908 3.246112 CGTCAACCCCTCCCACCA 61.246 66.667 0.00 0.00 0.00 4.17
840 913 3.749947 AACCCCTCCCACCACCACT 62.750 63.158 0.00 0.00 0.00 4.00
848 921 1.705002 CCCACCACCACTCCAACTCA 61.705 60.000 0.00 0.00 0.00 3.41
851 924 0.469917 ACCACCACTCCAACTCACAG 59.530 55.000 0.00 0.00 0.00 3.66
865 938 3.749064 ACAGGCGTCGTCGAGCAT 61.749 61.111 6.17 8.08 39.71 3.79
883 956 4.077184 CGCCAGTAACGCCTCCCA 62.077 66.667 0.00 0.00 0.00 4.37
884 957 2.590092 GCCAGTAACGCCTCCCAT 59.410 61.111 0.00 0.00 0.00 4.00
914 987 3.576356 CACGCATCGGCATCCACC 61.576 66.667 0.00 0.00 41.24 4.61
915 988 4.856801 ACGCATCGGCATCCACCC 62.857 66.667 0.00 0.00 41.24 4.61
916 989 4.854924 CGCATCGGCATCCACCCA 62.855 66.667 0.00 0.00 41.24 4.51
917 990 2.203394 GCATCGGCATCCACCCAT 60.203 61.111 0.00 0.00 40.72 4.00
921 994 2.343475 ATCGGCATCCACCCATCCAC 62.343 60.000 0.00 0.00 0.00 4.02
969 1042 0.681733 TTCCGCATCCAGATCTAGCC 59.318 55.000 0.00 0.00 0.00 3.93
970 1043 1.080230 CCGCATCCAGATCTAGCCG 60.080 63.158 0.00 0.00 0.00 5.52
971 1044 1.735920 CGCATCCAGATCTAGCCGC 60.736 63.158 0.00 0.00 0.00 6.53
972 1045 1.735920 GCATCCAGATCTAGCCGCG 60.736 63.158 0.00 0.00 0.00 6.46
1275 1373 2.202362 CTCGTCTCGGTGCTCGTG 60.202 66.667 0.54 0.00 40.32 4.35
2567 2689 4.596585 CCCCACCCACACCCACAC 62.597 72.222 0.00 0.00 0.00 3.82
2604 2726 3.716006 CAATAGCATCCGCGCCCG 61.716 66.667 0.00 0.00 45.49 6.13
2640 2766 3.198853 AGCTCTTCCAGATACAGAAACCC 59.801 47.826 0.00 0.00 0.00 4.11
2641 2767 3.786635 CTCTTCCAGATACAGAAACCCG 58.213 50.000 0.00 0.00 0.00 5.28
2643 2769 3.447586 TCTTCCAGATACAGAAACCCGAG 59.552 47.826 0.00 0.00 0.00 4.63
2644 2770 1.480954 TCCAGATACAGAAACCCGAGC 59.519 52.381 0.00 0.00 0.00 5.03
2645 2771 1.207089 CCAGATACAGAAACCCGAGCA 59.793 52.381 0.00 0.00 0.00 4.26
2646 2772 2.158900 CCAGATACAGAAACCCGAGCAT 60.159 50.000 0.00 0.00 0.00 3.79
2649 2775 2.596904 TACAGAAACCCGAGCATAGC 57.403 50.000 0.00 0.00 0.00 2.97
2699 2825 6.895898 GTCAATTACCAGATGCATAGATGTG 58.104 40.000 0.00 0.00 0.00 3.21
2700 2826 5.471116 TCAATTACCAGATGCATAGATGTGC 59.529 40.000 0.00 0.00 45.25 4.57
2741 2892 0.527385 GTGCGAGTCTGCTCTGATCC 60.527 60.000 8.13 0.00 39.53 3.36
2770 2921 1.065564 GCAACTCTGCCCTCATCTTCT 60.066 52.381 0.00 0.00 43.26 2.85
2771 2922 2.617532 GCAACTCTGCCCTCATCTTCTT 60.618 50.000 0.00 0.00 43.26 2.52
2772 2923 3.269178 CAACTCTGCCCTCATCTTCTTC 58.731 50.000 0.00 0.00 0.00 2.87
2774 2925 3.113824 ACTCTGCCCTCATCTTCTTCAT 58.886 45.455 0.00 0.00 0.00 2.57
2775 2926 3.134442 ACTCTGCCCTCATCTTCTTCATC 59.866 47.826 0.00 0.00 0.00 2.92
2776 2927 2.102084 TCTGCCCTCATCTTCTTCATCG 59.898 50.000 0.00 0.00 0.00 3.84
2779 2930 3.274288 GCCCTCATCTTCTTCATCGTTT 58.726 45.455 0.00 0.00 0.00 3.60
2780 2931 3.691609 GCCCTCATCTTCTTCATCGTTTT 59.308 43.478 0.00 0.00 0.00 2.43
2781 2932 4.437930 GCCCTCATCTTCTTCATCGTTTTG 60.438 45.833 0.00 0.00 0.00 2.44
2782 2933 4.937620 CCCTCATCTTCTTCATCGTTTTGA 59.062 41.667 0.00 0.00 0.00 2.69
2783 2934 5.587844 CCCTCATCTTCTTCATCGTTTTGAT 59.412 40.000 0.00 0.00 38.01 2.57
2784 2935 6.094603 CCCTCATCTTCTTCATCGTTTTGATT 59.905 38.462 0.00 0.00 34.13 2.57
2785 2936 6.965500 CCTCATCTTCTTCATCGTTTTGATTG 59.035 38.462 0.00 0.00 34.13 2.67
2786 2937 7.148356 CCTCATCTTCTTCATCGTTTTGATTGA 60.148 37.037 0.00 0.00 34.13 2.57
2790 2941 7.307694 TCTTCTTCATCGTTTTGATTGATTGG 58.692 34.615 0.00 0.00 34.13 3.16
2794 2945 5.468592 TCATCGTTTTGATTGATTGGTTGG 58.531 37.500 0.00 0.00 34.13 3.77
2813 2972 1.968493 GGTGGTCTGTGTACTTGAGGA 59.032 52.381 0.00 0.00 0.00 3.71
2814 2973 2.028930 GGTGGTCTGTGTACTTGAGGAG 60.029 54.545 0.00 0.00 0.00 3.69
2815 2974 2.028930 GTGGTCTGTGTACTTGAGGAGG 60.029 54.545 0.00 0.00 0.00 4.30
2816 2975 1.550976 GGTCTGTGTACTTGAGGAGGG 59.449 57.143 0.00 0.00 0.00 4.30
2843 3011 2.693864 CCATCCTGCCCTGACCCT 60.694 66.667 0.00 0.00 0.00 4.34
2846 3021 1.997874 ATCCTGCCCTGACCCTGTC 60.998 63.158 0.00 0.00 0.00 3.51
2847 3022 3.721706 CCTGCCCTGACCCTGTCC 61.722 72.222 0.00 0.00 0.00 4.02
2848 3023 3.721706 CTGCCCTGACCCTGTCCC 61.722 72.222 0.00 0.00 0.00 4.46
2849 3024 4.270153 TGCCCTGACCCTGTCCCT 62.270 66.667 0.00 0.00 0.00 4.20
2850 3025 3.721706 GCCCTGACCCTGTCCCTG 61.722 72.222 0.00 0.00 0.00 4.45
2851 3026 3.721706 CCCTGACCCTGTCCCTGC 61.722 72.222 0.00 0.00 0.00 4.85
2861 3036 1.544759 CCTGTCCCTGCGGTAAGTTTT 60.545 52.381 0.00 0.00 0.00 2.43
2862 3037 2.289819 CCTGTCCCTGCGGTAAGTTTTA 60.290 50.000 0.00 0.00 0.00 1.52
2863 3038 2.740447 CTGTCCCTGCGGTAAGTTTTAC 59.260 50.000 0.00 0.00 0.00 2.01
2898 3085 3.093057 AGTAGCAGAGTGGTGATGAGA 57.907 47.619 0.00 0.00 0.00 3.27
2899 3086 3.641046 AGTAGCAGAGTGGTGATGAGAT 58.359 45.455 0.00 0.00 0.00 2.75
2900 3087 4.797743 AGTAGCAGAGTGGTGATGAGATA 58.202 43.478 0.00 0.00 0.00 1.98
2901 3088 4.582656 AGTAGCAGAGTGGTGATGAGATAC 59.417 45.833 0.00 0.00 0.00 2.24
2903 3090 4.797743 AGCAGAGTGGTGATGAGATACTA 58.202 43.478 0.00 0.00 0.00 1.82
2904 3091 5.392995 AGCAGAGTGGTGATGAGATACTAT 58.607 41.667 0.00 0.00 0.00 2.12
2908 3095 7.257003 CAGAGTGGTGATGAGATACTATATGC 58.743 42.308 0.00 0.00 0.00 3.14
2912 3109 5.105187 TGGTGATGAGATACTATATGCCTGC 60.105 44.000 0.00 0.00 0.00 4.85
2970 3171 3.430651 CCATTGCTGCGGATTTACCATTT 60.431 43.478 0.00 0.00 38.90 2.32
2971 3172 3.502191 TTGCTGCGGATTTACCATTTC 57.498 42.857 0.00 0.00 38.90 2.17
2972 3173 2.441410 TGCTGCGGATTTACCATTTCA 58.559 42.857 0.00 0.00 38.90 2.69
2985 3212 1.852965 CCATTTCACCATAGGAGGGGT 59.147 52.381 0.00 0.00 38.10 4.95
2992 3219 2.370189 CACCATAGGAGGGGTCAATCTC 59.630 54.545 0.00 0.00 34.45 2.75
3010 3238 9.774742 GTCAATCTCTATTTTTGGTTACATGAC 57.225 33.333 0.00 0.00 0.00 3.06
3076 3307 2.751166 ATTGGGTCTGTCGACTGAAG 57.249 50.000 24.39 10.63 40.10 3.02
3100 3331 5.762825 ATGGAGCATGTATTTGTCATGTC 57.237 39.130 7.55 0.00 42.94 3.06
3140 3386 6.737720 TCTGCTATCATAGTGTCCTTGATT 57.262 37.500 0.00 0.00 32.58 2.57
3153 3402 5.353123 GTGTCCTTGATTTATACGCCTCAAA 59.647 40.000 0.00 0.00 0.00 2.69
3170 3419 7.093509 ACGCCTCAAATGGTTTTATTCCTTTAT 60.094 33.333 0.00 0.00 0.00 1.40
3224 3476 9.511272 TGGAAATCATATCTATCAATGTTCCTG 57.489 33.333 0.00 0.00 33.01 3.86
3225 3477 9.512588 GGAAATCATATCTATCAATGTTCCTGT 57.487 33.333 0.00 0.00 30.87 4.00
3227 3479 9.857656 AAATCATATCTATCAATGTTCCTGTGT 57.142 29.630 0.00 0.00 0.00 3.72
3228 3480 8.843885 ATCATATCTATCAATGTTCCTGTGTG 57.156 34.615 0.00 0.00 0.00 3.82
3229 3481 6.707608 TCATATCTATCAATGTTCCTGTGTGC 59.292 38.462 0.00 0.00 0.00 4.57
3230 3482 4.558226 TCTATCAATGTTCCTGTGTGCT 57.442 40.909 0.00 0.00 0.00 4.40
3231 3483 4.910195 TCTATCAATGTTCCTGTGTGCTT 58.090 39.130 0.00 0.00 0.00 3.91
3232 3484 6.048732 TCTATCAATGTTCCTGTGTGCTTA 57.951 37.500 0.00 0.00 0.00 3.09
3233 3485 5.874810 TCTATCAATGTTCCTGTGTGCTTAC 59.125 40.000 0.00 0.00 0.00 2.34
3234 3486 4.085357 TCAATGTTCCTGTGTGCTTACT 57.915 40.909 0.00 0.00 0.00 2.24
3235 3487 5.222079 TCAATGTTCCTGTGTGCTTACTA 57.778 39.130 0.00 0.00 0.00 1.82
3236 3488 5.237815 TCAATGTTCCTGTGTGCTTACTAG 58.762 41.667 0.00 0.00 0.00 2.57
3265 3517 9.615660 AGTTTATGATATATTGTACTCCCTCCA 57.384 33.333 0.00 0.00 0.00 3.86
3268 3520 7.682787 ATGATATATTGTACTCCCTCCATCC 57.317 40.000 0.00 0.00 0.00 3.51
3269 3521 5.656859 TGATATATTGTACTCCCTCCATCCG 59.343 44.000 0.00 0.00 0.00 4.18
3270 3522 1.424638 ATTGTACTCCCTCCATCCGG 58.575 55.000 0.00 0.00 0.00 5.14
3271 3523 0.337082 TTGTACTCCCTCCATCCGGA 59.663 55.000 6.61 6.61 39.79 5.14
3272 3524 0.337082 TGTACTCCCTCCATCCGGAA 59.663 55.000 9.01 0.00 42.21 4.30
3273 3525 1.273381 TGTACTCCCTCCATCCGGAAA 60.273 52.381 9.01 0.00 42.21 3.13
3274 3526 2.047830 GTACTCCCTCCATCCGGAAAT 58.952 52.381 9.01 0.00 42.21 2.17
3275 3527 2.489528 ACTCCCTCCATCCGGAAATA 57.510 50.000 9.01 0.00 42.21 1.40
3276 3528 2.047830 ACTCCCTCCATCCGGAAATAC 58.952 52.381 9.01 0.00 42.21 1.89
3277 3529 2.330216 CTCCCTCCATCCGGAAATACT 58.670 52.381 9.01 0.00 42.21 2.12
3278 3530 2.706190 CTCCCTCCATCCGGAAATACTT 59.294 50.000 9.01 0.00 42.21 2.24
3279 3531 2.438021 TCCCTCCATCCGGAAATACTTG 59.562 50.000 9.01 0.00 42.21 3.16
3280 3532 2.172717 CCCTCCATCCGGAAATACTTGT 59.827 50.000 9.01 0.00 42.21 3.16
3281 3533 3.467803 CCTCCATCCGGAAATACTTGTC 58.532 50.000 9.01 0.00 42.21 3.18
3282 3534 3.118408 CCTCCATCCGGAAATACTTGTCA 60.118 47.826 9.01 0.00 42.21 3.58
3283 3535 4.444876 CCTCCATCCGGAAATACTTGTCAT 60.445 45.833 9.01 0.00 42.21 3.06
3284 3536 4.703897 TCCATCCGGAAATACTTGTCATC 58.296 43.478 9.01 0.00 38.83 2.92
3285 3537 4.163268 TCCATCCGGAAATACTTGTCATCA 59.837 41.667 9.01 0.00 38.83 3.07
3286 3538 4.881273 CCATCCGGAAATACTTGTCATCAA 59.119 41.667 9.01 0.00 0.00 2.57
3287 3539 5.356751 CCATCCGGAAATACTTGTCATCAAA 59.643 40.000 9.01 0.00 32.87 2.69
3288 3540 6.127758 CCATCCGGAAATACTTGTCATCAAAA 60.128 38.462 9.01 0.00 32.87 2.44
3289 3541 7.416664 CCATCCGGAAATACTTGTCATCAAAAT 60.417 37.037 9.01 0.00 32.87 1.82
3290 3542 6.851609 TCCGGAAATACTTGTCATCAAAATG 58.148 36.000 0.00 0.00 32.87 2.32
3291 3543 6.657117 TCCGGAAATACTTGTCATCAAAATGA 59.343 34.615 0.00 0.00 39.63 2.57
3292 3544 7.175816 TCCGGAAATACTTGTCATCAAAATGAA 59.824 33.333 0.00 0.00 43.42 2.57
3293 3545 7.975616 CCGGAAATACTTGTCATCAAAATGAAT 59.024 33.333 0.00 0.00 43.42 2.57
3301 3553 8.096414 ACTTGTCATCAAAATGAATAAAAGGGG 58.904 33.333 0.00 0.00 43.42 4.79
3302 3554 7.789202 TGTCATCAAAATGAATAAAAGGGGA 57.211 32.000 0.00 0.00 43.42 4.81
3303 3555 8.378115 TGTCATCAAAATGAATAAAAGGGGAT 57.622 30.769 0.00 0.00 43.42 3.85
3304 3556 8.259411 TGTCATCAAAATGAATAAAAGGGGATG 58.741 33.333 0.00 0.00 43.42 3.51
3305 3557 8.260114 GTCATCAAAATGAATAAAAGGGGATGT 58.740 33.333 0.00 0.00 43.42 3.06
3306 3558 9.486123 TCATCAAAATGAATAAAAGGGGATGTA 57.514 29.630 0.00 0.00 38.97 2.29
3309 3561 9.713684 TCAAAATGAATAAAAGGGGATGTATCT 57.286 29.630 0.00 0.00 0.00 1.98
3315 3567 9.170890 TGAATAAAAGGGGATGTATCTAGATGT 57.829 33.333 15.79 1.25 0.00 3.06
3323 3575 9.845214 AGGGGATGTATCTAGATGTATTTTAGT 57.155 33.333 15.79 0.00 0.00 2.24
3368 3620 7.307493 TCCATTTTGATGACAAGTATTCTCG 57.693 36.000 0.00 0.00 37.32 4.04
3369 3621 6.316140 TCCATTTTGATGACAAGTATTCTCGG 59.684 38.462 0.00 0.00 37.32 4.63
3370 3622 6.316140 CCATTTTGATGACAAGTATTCTCGGA 59.684 38.462 0.00 0.00 37.32 4.55
3371 3623 6.721571 TTTTGATGACAAGTATTCTCGGAC 57.278 37.500 0.00 0.00 37.32 4.79
3372 3624 4.028852 TGATGACAAGTATTCTCGGACG 57.971 45.455 0.00 0.00 0.00 4.79
3373 3625 2.933495 TGACAAGTATTCTCGGACGG 57.067 50.000 0.00 0.00 0.00 4.79
3374 3626 2.439409 TGACAAGTATTCTCGGACGGA 58.561 47.619 0.00 0.00 0.00 4.69
3375 3627 2.422479 TGACAAGTATTCTCGGACGGAG 59.578 50.000 3.68 3.68 44.58 4.63
3376 3628 1.749634 ACAAGTATTCTCGGACGGAGG 59.250 52.381 9.88 0.00 43.34 4.30
3377 3629 1.067212 CAAGTATTCTCGGACGGAGGG 59.933 57.143 9.88 0.00 43.34 4.30
3378 3630 0.549950 AGTATTCTCGGACGGAGGGA 59.450 55.000 9.88 0.77 43.34 4.20
3379 3631 0.953003 GTATTCTCGGACGGAGGGAG 59.047 60.000 9.88 0.00 43.34 4.30
3380 3632 0.549950 TATTCTCGGACGGAGGGAGT 59.450 55.000 9.88 0.00 43.34 3.85
3381 3633 0.549950 ATTCTCGGACGGAGGGAGTA 59.450 55.000 9.88 0.00 43.34 2.59
3382 3634 0.549950 TTCTCGGACGGAGGGAGTAT 59.450 55.000 9.88 0.00 43.34 2.12
3383 3635 0.549950 TCTCGGACGGAGGGAGTATT 59.450 55.000 9.88 0.00 43.34 1.89
3384 3636 1.770658 TCTCGGACGGAGGGAGTATTA 59.229 52.381 9.88 0.00 43.34 0.98
3385 3637 1.878734 CTCGGACGGAGGGAGTATTAC 59.121 57.143 2.13 0.00 39.22 1.89
3386 3638 0.957362 CGGACGGAGGGAGTATTACC 59.043 60.000 0.00 0.00 0.00 2.85
3387 3639 1.478288 CGGACGGAGGGAGTATTACCT 60.478 57.143 0.00 0.00 40.54 3.08
3388 3640 2.224621 CGGACGGAGGGAGTATTACCTA 60.225 54.545 0.00 0.00 37.18 3.08
3389 3641 3.560882 CGGACGGAGGGAGTATTACCTAT 60.561 52.174 0.00 0.00 37.18 2.57
3390 3642 4.323792 CGGACGGAGGGAGTATTACCTATA 60.324 50.000 0.00 0.00 37.18 1.31
3391 3643 5.631009 CGGACGGAGGGAGTATTACCTATAT 60.631 48.000 0.00 0.00 37.18 0.86
3392 3644 5.827267 GGACGGAGGGAGTATTACCTATATC 59.173 48.000 0.00 0.00 37.18 1.63
3393 3645 6.353777 GGACGGAGGGAGTATTACCTATATCT 60.354 46.154 0.00 0.00 37.18 1.98
3394 3646 6.661777 ACGGAGGGAGTATTACCTATATCTC 58.338 44.000 0.00 0.00 37.18 2.75
3395 3647 6.447735 ACGGAGGGAGTATTACCTATATCTCT 59.552 42.308 0.00 0.00 37.18 3.10
3396 3648 7.036717 ACGGAGGGAGTATTACCTATATCTCTT 60.037 40.741 0.00 0.00 37.18 2.85
3397 3649 7.283580 CGGAGGGAGTATTACCTATATCTCTTG 59.716 44.444 0.00 0.00 37.18 3.02
3398 3650 8.337739 GGAGGGAGTATTACCTATATCTCTTGA 58.662 40.741 0.00 0.00 37.18 3.02
3399 3651 9.403583 GAGGGAGTATTACCTATATCTCTTGAG 57.596 40.741 0.00 0.00 37.18 3.02
3400 3652 7.837187 AGGGAGTATTACCTATATCTCTTGAGC 59.163 40.741 0.00 0.00 34.71 4.26
3401 3653 7.616150 GGGAGTATTACCTATATCTCTTGAGCA 59.384 40.741 0.00 0.00 0.00 4.26
3402 3654 9.026121 GGAGTATTACCTATATCTCTTGAGCAA 57.974 37.037 0.00 0.00 0.00 3.91
3404 3656 9.815306 AGTATTACCTATATCTCTTGAGCAAGA 57.185 33.333 11.98 11.98 44.47 3.02
3407 3659 6.418057 ACCTATATCTCTTGAGCAAGAAGG 57.582 41.667 19.16 19.16 45.75 3.46
3408 3660 5.902431 ACCTATATCTCTTGAGCAAGAAGGT 59.098 40.000 20.09 20.09 45.75 3.50
3409 3661 6.183360 ACCTATATCTCTTGAGCAAGAAGGTG 60.183 42.308 22.98 10.30 45.10 4.00
3410 3662 2.847327 TCTCTTGAGCAAGAAGGTGG 57.153 50.000 13.35 2.92 45.75 4.61
3411 3663 2.050144 TCTCTTGAGCAAGAAGGTGGT 58.950 47.619 13.35 0.00 45.75 4.16
3412 3664 2.149578 CTCTTGAGCAAGAAGGTGGTG 58.850 52.381 13.35 0.00 45.75 4.17
3413 3665 0.595095 CTTGAGCAAGAAGGTGGTGC 59.405 55.000 4.22 0.00 40.79 5.01
3415 3667 4.488790 AGCAAGAAGGTGGTGCTG 57.511 55.556 0.00 0.00 46.58 4.41
3416 3668 1.900498 AGCAAGAAGGTGGTGCTGC 60.900 57.895 0.00 0.00 46.58 5.25
3417 3669 1.900498 GCAAGAAGGTGGTGCTGCT 60.900 57.895 0.00 0.00 35.36 4.24
3418 3670 1.954528 CAAGAAGGTGGTGCTGCTG 59.045 57.895 0.00 0.00 0.00 4.41
3419 3671 0.535780 CAAGAAGGTGGTGCTGCTGA 60.536 55.000 0.00 0.00 0.00 4.26
3420 3672 0.403271 AAGAAGGTGGTGCTGCTGAT 59.597 50.000 0.00 0.00 0.00 2.90
3421 3673 0.403271 AGAAGGTGGTGCTGCTGATT 59.597 50.000 0.00 0.00 0.00 2.57
3422 3674 0.524862 GAAGGTGGTGCTGCTGATTG 59.475 55.000 0.00 0.00 0.00 2.67
3423 3675 0.178981 AAGGTGGTGCTGCTGATTGT 60.179 50.000 0.00 0.00 0.00 2.71
3424 3676 0.892358 AGGTGGTGCTGCTGATTGTG 60.892 55.000 0.00 0.00 0.00 3.33
3425 3677 0.890542 GGTGGTGCTGCTGATTGTGA 60.891 55.000 0.00 0.00 0.00 3.58
3426 3678 1.171308 GTGGTGCTGCTGATTGTGAT 58.829 50.000 0.00 0.00 0.00 3.06
3427 3679 1.131883 GTGGTGCTGCTGATTGTGATC 59.868 52.381 0.00 0.00 0.00 2.92
3428 3680 1.003928 TGGTGCTGCTGATTGTGATCT 59.996 47.619 0.00 0.00 33.28 2.75
3429 3681 2.089980 GGTGCTGCTGATTGTGATCTT 58.910 47.619 0.00 0.00 33.28 2.40
3430 3682 2.490903 GGTGCTGCTGATTGTGATCTTT 59.509 45.455 0.00 0.00 33.28 2.52
3431 3683 3.057033 GGTGCTGCTGATTGTGATCTTTT 60.057 43.478 0.00 0.00 33.28 2.27
3432 3684 4.553323 GTGCTGCTGATTGTGATCTTTTT 58.447 39.130 0.00 0.00 33.28 1.94
3455 3707 5.771153 TTTTTGAGATGTGCTGATTGTGA 57.229 34.783 0.00 0.00 0.00 3.58
3456 3708 5.970317 TTTTGAGATGTGCTGATTGTGAT 57.030 34.783 0.00 0.00 0.00 3.06
3457 3709 5.556355 TTTGAGATGTGCTGATTGTGATC 57.444 39.130 0.00 0.00 0.00 2.92
3458 3710 4.482952 TGAGATGTGCTGATTGTGATCT 57.517 40.909 0.00 0.00 33.28 2.75
3459 3711 4.840271 TGAGATGTGCTGATTGTGATCTT 58.160 39.130 0.00 0.00 33.28 2.40
3460 3712 5.981174 TGAGATGTGCTGATTGTGATCTTA 58.019 37.500 0.00 0.00 33.28 2.10
3461 3713 6.047231 TGAGATGTGCTGATTGTGATCTTAG 58.953 40.000 0.00 0.00 33.28 2.18
3462 3714 6.127253 TGAGATGTGCTGATTGTGATCTTAGA 60.127 38.462 0.00 0.00 33.28 2.10
3463 3715 6.047870 AGATGTGCTGATTGTGATCTTAGAC 58.952 40.000 0.00 0.00 33.28 2.59
3464 3716 5.151297 TGTGCTGATTGTGATCTTAGACA 57.849 39.130 0.00 0.00 33.28 3.41
3465 3717 5.550290 TGTGCTGATTGTGATCTTAGACAA 58.450 37.500 0.00 0.00 36.54 3.18
3466 3718 5.640783 TGTGCTGATTGTGATCTTAGACAAG 59.359 40.000 3.17 0.00 35.60 3.16
3467 3719 5.871524 GTGCTGATTGTGATCTTAGACAAGA 59.128 40.000 3.17 0.00 44.77 3.02
3468 3720 6.369890 GTGCTGATTGTGATCTTAGACAAGAA 59.630 38.462 3.17 0.00 43.89 2.52
3469 3721 6.369890 TGCTGATTGTGATCTTAGACAAGAAC 59.630 38.462 3.17 0.00 43.89 3.01
3470 3722 6.369890 GCTGATTGTGATCTTAGACAAGAACA 59.630 38.462 3.17 0.00 43.89 3.18
3471 3723 7.412781 GCTGATTGTGATCTTAGACAAGAACAG 60.413 40.741 15.51 15.51 42.29 3.16
3472 3724 7.670364 TGATTGTGATCTTAGACAAGAACAGA 58.330 34.615 3.17 0.00 42.29 3.41
3473 3725 7.600375 TGATTGTGATCTTAGACAAGAACAGAC 59.400 37.037 3.17 0.00 42.29 3.51
3474 3726 5.784177 TGTGATCTTAGACAAGAACAGACC 58.216 41.667 0.00 0.00 42.29 3.85
3475 3727 4.859798 GTGATCTTAGACAAGAACAGACCG 59.140 45.833 0.00 0.00 42.29 4.79
3476 3728 3.936372 TCTTAGACAAGAACAGACCGG 57.064 47.619 0.00 0.00 37.85 5.28
3477 3729 2.029290 TCTTAGACAAGAACAGACCGGC 60.029 50.000 0.00 0.00 37.85 6.13
3478 3730 1.334160 TAGACAAGAACAGACCGGCA 58.666 50.000 0.00 0.00 0.00 5.69
3479 3731 0.687354 AGACAAGAACAGACCGGCAT 59.313 50.000 0.00 0.00 0.00 4.40
3480 3732 1.079503 GACAAGAACAGACCGGCATC 58.920 55.000 0.00 0.00 0.00 3.91
3481 3733 0.321653 ACAAGAACAGACCGGCATCC 60.322 55.000 0.00 0.00 0.00 3.51
3483 3735 1.827399 AAGAACAGACCGGCATCCGT 61.827 55.000 0.00 0.00 46.80 4.69
3484 3736 1.375523 GAACAGACCGGCATCCGTT 60.376 57.895 0.00 0.00 46.80 4.44
3485 3737 1.359459 GAACAGACCGGCATCCGTTC 61.359 60.000 0.00 3.16 46.80 3.95
3486 3738 2.885644 CAGACCGGCATCCGTTCG 60.886 66.667 0.00 0.00 43.16 3.95
3487 3739 3.066190 AGACCGGCATCCGTTCGA 61.066 61.111 0.00 0.00 43.16 3.71
3488 3740 2.106332 GACCGGCATCCGTTCGAT 59.894 61.111 0.00 0.00 46.80 3.59
3489 3741 1.949631 GACCGGCATCCGTTCGATC 60.950 63.158 0.00 0.00 46.80 3.69
3490 3742 2.106131 CCGGCATCCGTTCGATCA 59.894 61.111 4.47 0.00 46.80 2.92
3491 3743 1.300931 CCGGCATCCGTTCGATCAT 60.301 57.895 4.47 0.00 46.80 2.45
3492 3744 1.560004 CCGGCATCCGTTCGATCATG 61.560 60.000 4.47 0.00 46.80 3.07
3493 3745 0.875908 CGGCATCCGTTCGATCATGT 60.876 55.000 0.00 0.00 42.73 3.21
3494 3746 0.583438 GGCATCCGTTCGATCATGTG 59.417 55.000 0.00 0.00 0.00 3.21
3495 3747 1.290203 GCATCCGTTCGATCATGTGT 58.710 50.000 0.00 0.00 0.00 3.72
3496 3748 1.665679 GCATCCGTTCGATCATGTGTT 59.334 47.619 0.00 0.00 0.00 3.32
3497 3749 2.537529 GCATCCGTTCGATCATGTGTTG 60.538 50.000 0.00 0.00 0.00 3.33
3498 3750 2.734276 TCCGTTCGATCATGTGTTGA 57.266 45.000 0.00 0.00 39.12 3.18
3500 3752 2.929398 TCCGTTCGATCATGTGTTGATG 59.071 45.455 0.00 0.00 45.29 3.07
3501 3753 2.929398 CCGTTCGATCATGTGTTGATGA 59.071 45.455 0.00 0.00 45.29 2.92
3502 3754 3.370672 CCGTTCGATCATGTGTTGATGAA 59.629 43.478 0.00 0.00 45.29 2.57
3503 3755 4.034394 CCGTTCGATCATGTGTTGATGAAT 59.966 41.667 0.00 0.00 45.29 2.57
3504 3756 5.447683 CCGTTCGATCATGTGTTGATGAATT 60.448 40.000 0.00 0.00 45.29 2.17
3505 3757 6.023435 CGTTCGATCATGTGTTGATGAATTT 58.977 36.000 0.00 0.00 45.29 1.82
3506 3758 6.022017 CGTTCGATCATGTGTTGATGAATTTG 60.022 38.462 0.00 0.00 45.29 2.32
3507 3759 5.334319 TCGATCATGTGTTGATGAATTTGC 58.666 37.500 0.00 0.00 45.29 3.68
3508 3760 5.096849 CGATCATGTGTTGATGAATTTGCA 58.903 37.500 0.00 0.00 45.29 4.08
3509 3761 5.229260 CGATCATGTGTTGATGAATTTGCAG 59.771 40.000 0.00 0.00 45.29 4.41
3510 3762 5.708877 TCATGTGTTGATGAATTTGCAGA 57.291 34.783 0.00 0.00 29.11 4.26
3511 3763 6.275494 TCATGTGTTGATGAATTTGCAGAT 57.725 33.333 0.00 0.00 29.11 2.90
3512 3764 6.693466 TCATGTGTTGATGAATTTGCAGATT 58.307 32.000 1.40 1.40 29.11 2.40
3513 3765 7.156000 TCATGTGTTGATGAATTTGCAGATTT 58.844 30.769 3.69 0.00 29.11 2.17
3514 3766 8.305317 TCATGTGTTGATGAATTTGCAGATTTA 58.695 29.630 3.69 0.04 29.11 1.40
3515 3767 8.927721 CATGTGTTGATGAATTTGCAGATTTAA 58.072 29.630 3.69 0.00 0.00 1.52
3516 3768 8.523523 TGTGTTGATGAATTTGCAGATTTAAG 57.476 30.769 3.69 0.00 0.00 1.85
3517 3769 8.358895 TGTGTTGATGAATTTGCAGATTTAAGA 58.641 29.630 3.69 0.00 0.00 2.10
3518 3770 8.857216 GTGTTGATGAATTTGCAGATTTAAGAG 58.143 33.333 3.69 0.00 0.00 2.85
3519 3771 8.030692 TGTTGATGAATTTGCAGATTTAAGAGG 58.969 33.333 3.69 0.00 0.00 3.69
3520 3772 7.707624 TGATGAATTTGCAGATTTAAGAGGT 57.292 32.000 3.69 0.00 0.00 3.85
3521 3773 8.806429 TGATGAATTTGCAGATTTAAGAGGTA 57.194 30.769 3.69 0.00 0.00 3.08
3522 3774 9.241919 TGATGAATTTGCAGATTTAAGAGGTAA 57.758 29.630 3.69 0.00 0.00 2.85
3529 3781 8.677148 TTGCAGATTTAAGAGGTAATATCACC 57.323 34.615 0.00 0.00 39.02 4.02
3530 3782 6.929049 TGCAGATTTAAGAGGTAATATCACCG 59.071 38.462 0.00 0.00 43.84 4.94
3531 3783 6.369065 GCAGATTTAAGAGGTAATATCACCGG 59.631 42.308 0.00 0.00 43.84 5.28
3532 3784 7.442656 CAGATTTAAGAGGTAATATCACCGGT 58.557 38.462 0.00 0.00 43.84 5.28
3533 3785 8.582437 CAGATTTAAGAGGTAATATCACCGGTA 58.418 37.037 6.87 0.00 43.84 4.02
3534 3786 8.804204 AGATTTAAGAGGTAATATCACCGGTAG 58.196 37.037 6.87 1.53 43.84 3.18
3535 3787 7.902920 TTTAAGAGGTAATATCACCGGTAGT 57.097 36.000 6.87 0.42 43.84 2.73
3536 3788 7.516198 TTAAGAGGTAATATCACCGGTAGTC 57.484 40.000 6.87 0.00 43.84 2.59
3537 3789 5.057843 AGAGGTAATATCACCGGTAGTCA 57.942 43.478 6.87 0.00 43.84 3.41
3538 3790 5.642165 AGAGGTAATATCACCGGTAGTCAT 58.358 41.667 6.87 0.00 43.84 3.06
3539 3791 6.787170 AGAGGTAATATCACCGGTAGTCATA 58.213 40.000 6.87 1.72 43.84 2.15
3540 3792 6.885376 AGAGGTAATATCACCGGTAGTCATAG 59.115 42.308 6.87 0.00 43.84 2.23
3541 3793 6.787170 AGGTAATATCACCGGTAGTCATAGA 58.213 40.000 6.87 0.00 43.84 1.98
3542 3794 7.236529 AGGTAATATCACCGGTAGTCATAGAA 58.763 38.462 6.87 0.00 43.84 2.10
3543 3795 7.176340 AGGTAATATCACCGGTAGTCATAGAAC 59.824 40.741 6.87 4.32 43.84 3.01
3544 3796 7.176340 GGTAATATCACCGGTAGTCATAGAACT 59.824 40.741 6.87 0.00 0.00 3.01
3545 3797 7.598759 AATATCACCGGTAGTCATAGAACTT 57.401 36.000 6.87 0.00 0.00 2.66
3546 3798 4.713824 TCACCGGTAGTCATAGAACTTG 57.286 45.455 6.87 0.00 0.00 3.16
3547 3799 3.119245 TCACCGGTAGTCATAGAACTTGC 60.119 47.826 6.87 0.00 0.00 4.01
3548 3800 2.159282 ACCGGTAGTCATAGAACTTGCG 60.159 50.000 4.49 0.00 0.00 4.85
3549 3801 2.159282 CCGGTAGTCATAGAACTTGCGT 60.159 50.000 0.00 0.00 0.00 5.24
3550 3802 3.508762 CGGTAGTCATAGAACTTGCGTT 58.491 45.455 0.00 0.00 35.68 4.84
3551 3803 3.303495 CGGTAGTCATAGAACTTGCGTTG 59.697 47.826 0.00 0.00 32.39 4.10
3552 3804 3.062234 GGTAGTCATAGAACTTGCGTTGC 59.938 47.826 0.00 0.00 32.39 4.17
3553 3805 2.766313 AGTCATAGAACTTGCGTTGCA 58.234 42.857 0.00 0.00 36.47 4.08
3554 3806 3.338249 AGTCATAGAACTTGCGTTGCAT 58.662 40.909 0.00 0.00 38.76 3.96
3555 3807 3.125829 AGTCATAGAACTTGCGTTGCATG 59.874 43.478 3.45 3.45 38.76 4.06
3556 3808 3.073678 TCATAGAACTTGCGTTGCATGT 58.926 40.909 4.68 4.68 46.28 3.21
3560 3812 3.851620 ACTTGCGTTGCATGTTCAG 57.148 47.368 4.68 0.00 42.78 3.02
3561 3813 1.024271 ACTTGCGTTGCATGTTCAGT 58.976 45.000 4.68 0.00 42.78 3.41
3562 3814 1.405105 ACTTGCGTTGCATGTTCAGTT 59.595 42.857 4.68 0.00 42.78 3.16
3563 3815 2.159254 ACTTGCGTTGCATGTTCAGTTT 60.159 40.909 4.68 0.00 42.78 2.66
3564 3816 2.575694 TGCGTTGCATGTTCAGTTTT 57.424 40.000 0.00 0.00 31.71 2.43
3565 3817 2.191802 TGCGTTGCATGTTCAGTTTTG 58.808 42.857 0.00 0.00 31.71 2.44
3566 3818 2.192624 GCGTTGCATGTTCAGTTTTGT 58.807 42.857 0.00 0.00 0.00 2.83
3567 3819 2.034675 GCGTTGCATGTTCAGTTTTGTG 60.035 45.455 0.00 0.00 0.00 3.33
3568 3820 2.034675 CGTTGCATGTTCAGTTTTGTGC 60.035 45.455 0.00 0.00 0.00 4.57
3569 3821 3.189285 GTTGCATGTTCAGTTTTGTGCT 58.811 40.909 0.00 0.00 33.95 4.40
3570 3822 4.358851 GTTGCATGTTCAGTTTTGTGCTA 58.641 39.130 0.00 0.00 33.95 3.49
3571 3823 4.645762 TGCATGTTCAGTTTTGTGCTAA 57.354 36.364 0.00 0.00 33.95 3.09
3572 3824 5.003692 TGCATGTTCAGTTTTGTGCTAAA 57.996 34.783 0.00 0.00 33.95 1.85
3573 3825 5.414360 TGCATGTTCAGTTTTGTGCTAAAA 58.586 33.333 0.00 0.00 33.95 1.52
3574 3826 5.290643 TGCATGTTCAGTTTTGTGCTAAAAC 59.709 36.000 16.87 16.87 39.67 2.43
3576 3828 6.035975 GCATGTTCAGTTTTGTGCTAAAACTT 59.964 34.615 21.69 10.46 45.20 2.66
3577 3829 7.412891 GCATGTTCAGTTTTGTGCTAAAACTTT 60.413 33.333 21.69 7.40 45.20 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 7.039270 GTCTCACCAAAAACCTAATGTGTTTT 58.961 34.615 0.00 0.00 45.23 2.43
16 17 6.379988 AGTCTCACCAAAAACCTAATGTGTTT 59.620 34.615 0.00 0.00 34.60 2.83
17 18 5.891551 AGTCTCACCAAAAACCTAATGTGTT 59.108 36.000 0.00 0.00 0.00 3.32
18 19 5.299279 CAGTCTCACCAAAAACCTAATGTGT 59.701 40.000 0.00 0.00 0.00 3.72
19 20 5.278463 CCAGTCTCACCAAAAACCTAATGTG 60.278 44.000 0.00 0.00 0.00 3.21
20 21 4.827284 CCAGTCTCACCAAAAACCTAATGT 59.173 41.667 0.00 0.00 0.00 2.71
21 22 5.070001 TCCAGTCTCACCAAAAACCTAATG 58.930 41.667 0.00 0.00 0.00 1.90
22 23 5.319043 TCCAGTCTCACCAAAAACCTAAT 57.681 39.130 0.00 0.00 0.00 1.73
23 24 4.781775 TCCAGTCTCACCAAAAACCTAA 57.218 40.909 0.00 0.00 0.00 2.69
24 25 4.993705 ATCCAGTCTCACCAAAAACCTA 57.006 40.909 0.00 0.00 0.00 3.08
25 26 3.884037 ATCCAGTCTCACCAAAAACCT 57.116 42.857 0.00 0.00 0.00 3.50
26 27 3.636764 ACAATCCAGTCTCACCAAAAACC 59.363 43.478 0.00 0.00 0.00 3.27
27 28 4.918810 ACAATCCAGTCTCACCAAAAAC 57.081 40.909 0.00 0.00 0.00 2.43
28 29 5.930837 AAACAATCCAGTCTCACCAAAAA 57.069 34.783 0.00 0.00 0.00 1.94
29 30 5.930837 AAAACAATCCAGTCTCACCAAAA 57.069 34.783 0.00 0.00 0.00 2.44
30 31 5.656416 AGAAAAACAATCCAGTCTCACCAAA 59.344 36.000 0.00 0.00 0.00 3.28
31 32 5.200483 AGAAAAACAATCCAGTCTCACCAA 58.800 37.500 0.00 0.00 0.00 3.67
32 33 4.792068 AGAAAAACAATCCAGTCTCACCA 58.208 39.130 0.00 0.00 0.00 4.17
33 34 5.066593 AGAGAAAAACAATCCAGTCTCACC 58.933 41.667 0.00 0.00 35.11 4.02
34 35 5.107298 CGAGAGAAAAACAATCCAGTCTCAC 60.107 44.000 0.00 0.00 35.11 3.51
35 36 4.991056 CGAGAGAAAAACAATCCAGTCTCA 59.009 41.667 0.00 0.00 35.11 3.27
36 37 4.390297 CCGAGAGAAAAACAATCCAGTCTC 59.610 45.833 0.00 0.00 33.27 3.36
37 38 4.040461 TCCGAGAGAAAAACAATCCAGTCT 59.960 41.667 0.00 0.00 0.00 3.24
38 39 4.315803 TCCGAGAGAAAAACAATCCAGTC 58.684 43.478 0.00 0.00 0.00 3.51
39 40 4.319177 CTCCGAGAGAAAAACAATCCAGT 58.681 43.478 0.00 0.00 0.00 4.00
40 41 3.686726 CCTCCGAGAGAAAAACAATCCAG 59.313 47.826 0.00 0.00 0.00 3.86
41 42 3.559171 CCCTCCGAGAGAAAAACAATCCA 60.559 47.826 0.00 0.00 0.00 3.41
42 43 3.010420 CCCTCCGAGAGAAAAACAATCC 58.990 50.000 0.00 0.00 0.00 3.01
43 44 3.939066 TCCCTCCGAGAGAAAAACAATC 58.061 45.455 0.00 0.00 0.00 2.67
44 45 4.576330 ATCCCTCCGAGAGAAAAACAAT 57.424 40.909 0.00 0.00 0.00 2.71
45 46 5.492855 TTATCCCTCCGAGAGAAAAACAA 57.507 39.130 0.00 0.00 0.00 2.83
46 47 5.221762 TGTTTATCCCTCCGAGAGAAAAACA 60.222 40.000 0.00 6.09 0.00 2.83
47 48 5.243207 TGTTTATCCCTCCGAGAGAAAAAC 58.757 41.667 0.00 3.76 0.00 2.43
48 49 5.492855 TGTTTATCCCTCCGAGAGAAAAA 57.507 39.130 0.00 0.00 0.00 1.94
49 50 5.693769 ATGTTTATCCCTCCGAGAGAAAA 57.306 39.130 0.00 0.00 0.00 2.29
50 51 5.693769 AATGTTTATCCCTCCGAGAGAAA 57.306 39.130 0.00 0.00 0.00 2.52
51 52 5.693769 AAATGTTTATCCCTCCGAGAGAA 57.306 39.130 0.00 0.00 0.00 2.87
52 53 6.996180 ATAAATGTTTATCCCTCCGAGAGA 57.004 37.500 0.00 0.00 0.00 3.10
53 54 6.807230 CGTATAAATGTTTATCCCTCCGAGAG 59.193 42.308 0.00 0.00 35.20 3.20
54 55 6.684686 CGTATAAATGTTTATCCCTCCGAGA 58.315 40.000 0.00 0.00 35.20 4.04
55 56 5.347907 GCGTATAAATGTTTATCCCTCCGAG 59.652 44.000 1.51 0.00 35.20 4.63
56 57 5.221481 TGCGTATAAATGTTTATCCCTCCGA 60.221 40.000 1.51 0.00 35.20 4.55
57 58 4.992319 TGCGTATAAATGTTTATCCCTCCG 59.008 41.667 1.51 1.18 35.20 4.63
58 59 6.485648 ACTTGCGTATAAATGTTTATCCCTCC 59.514 38.462 1.51 0.00 35.20 4.30
59 60 7.492352 ACTTGCGTATAAATGTTTATCCCTC 57.508 36.000 1.51 0.00 35.20 4.30
60 61 7.554835 TGAACTTGCGTATAAATGTTTATCCCT 59.445 33.333 1.51 0.00 35.20 4.20
61 62 7.699566 TGAACTTGCGTATAAATGTTTATCCC 58.300 34.615 1.51 0.00 35.20 3.85
62 63 9.169468 CATGAACTTGCGTATAAATGTTTATCC 57.831 33.333 1.51 0.00 35.20 2.59
63 64 9.169468 CCATGAACTTGCGTATAAATGTTTATC 57.831 33.333 0.00 0.00 35.20 1.75
64 65 8.134895 CCCATGAACTTGCGTATAAATGTTTAT 58.865 33.333 0.00 3.73 37.19 1.40
65 66 7.415765 CCCCATGAACTTGCGTATAAATGTTTA 60.416 37.037 0.00 0.00 0.00 2.01
66 67 6.329496 CCCATGAACTTGCGTATAAATGTTT 58.671 36.000 0.00 0.00 0.00 2.83
67 68 5.163561 CCCCATGAACTTGCGTATAAATGTT 60.164 40.000 0.00 0.00 0.00 2.71
68 69 4.338118 CCCCATGAACTTGCGTATAAATGT 59.662 41.667 0.00 0.00 0.00 2.71
69 70 4.792704 GCCCCATGAACTTGCGTATAAATG 60.793 45.833 0.00 0.00 0.00 2.32
70 71 3.317993 GCCCCATGAACTTGCGTATAAAT 59.682 43.478 0.00 0.00 0.00 1.40
71 72 2.685897 GCCCCATGAACTTGCGTATAAA 59.314 45.455 0.00 0.00 0.00 1.40
74 75 0.255890 AGCCCCATGAACTTGCGTAT 59.744 50.000 0.00 0.00 0.00 3.06
85 86 2.346766 TACAACTGCATAGCCCCATG 57.653 50.000 0.00 0.00 0.00 3.66
89 90 4.608948 AGACTATACAACTGCATAGCCC 57.391 45.455 0.00 0.00 0.00 5.19
91 92 7.492669 TGAGAAAAGACTATACAACTGCATAGC 59.507 37.037 0.00 0.00 0.00 2.97
95 96 7.173218 CCTTTGAGAAAAGACTATACAACTGCA 59.827 37.037 0.00 0.00 31.58 4.41
145 149 5.598417 AGCCAAAACACTTCACTCCTATTTT 59.402 36.000 0.00 0.00 0.00 1.82
146 150 5.140454 AGCCAAAACACTTCACTCCTATTT 58.860 37.500 0.00 0.00 0.00 1.40
147 151 4.729868 AGCCAAAACACTTCACTCCTATT 58.270 39.130 0.00 0.00 0.00 1.73
148 152 4.042187 AGAGCCAAAACACTTCACTCCTAT 59.958 41.667 0.00 0.00 0.00 2.57
158 162 4.065110 GCCGAGAGCCAAAACACT 57.935 55.556 0.00 0.00 34.35 3.55
196 200 8.798859 TCAGGACAAAATTTTGAATTTTCCAA 57.201 26.923 32.20 18.19 40.55 3.53
214 218 8.363390 TGCATAAATGTGTAAATTTTCAGGACA 58.637 29.630 0.00 0.00 32.16 4.02
279 283 9.925268 ATCGTCCAAATTCATATTTTTACGTAC 57.075 29.630 0.00 0.00 38.80 3.67
292 298 9.928236 GAAAAATTTCAAAATCGTCCAAATTCA 57.072 25.926 1.11 0.00 37.15 2.57
309 315 4.318475 CGAGGCCGGTTTTTGAAAAATTTC 60.318 41.667 6.35 0.00 37.69 2.17
312 318 2.101750 ACGAGGCCGGTTTTTGAAAAAT 59.898 40.909 6.35 0.00 40.78 1.82
327 333 3.491652 GCCGAGCTTCAACGAGGC 61.492 66.667 0.00 0.00 37.61 4.70
329 335 1.807573 GAGGCCGAGCTTCAACGAG 60.808 63.158 0.00 0.00 34.72 4.18
332 338 0.889186 TTTGGAGGCCGAGCTTCAAC 60.889 55.000 0.00 0.00 36.34 3.18
336 342 1.303643 CCTTTTGGAGGCCGAGCTT 60.304 57.895 0.00 0.00 44.07 3.74
370 376 5.121768 TGATTTGAAGGTAAGAAAGCGCTAC 59.878 40.000 12.05 8.57 0.00 3.58
396 428 4.271291 GCTAGCGCATAATTATTCCTAGGC 59.729 45.833 11.47 8.56 35.78 3.93
519 558 2.943033 ACTACTTTTATCCGCCATGCAC 59.057 45.455 0.00 0.00 0.00 4.57
566 605 4.202151 GGTCACTGATTTTGCTGGTTTTCT 60.202 41.667 0.00 0.00 0.00 2.52
572 611 1.522668 TCGGTCACTGATTTTGCTGG 58.477 50.000 0.00 0.00 0.00 4.85
574 613 3.612479 GCATTTCGGTCACTGATTTTGCT 60.612 43.478 8.13 0.00 0.00 3.91
575 614 2.663119 GCATTTCGGTCACTGATTTTGC 59.337 45.455 0.00 0.00 0.00 3.68
576 615 3.244976 GGCATTTCGGTCACTGATTTTG 58.755 45.455 0.00 0.00 0.00 2.44
586 625 2.750888 GGACGCTGGCATTTCGGTC 61.751 63.158 8.40 2.96 0.00 4.79
620 659 4.692625 CCTCGAAGAATGTGACATTTCAGT 59.307 41.667 12.62 0.00 34.09 3.41
622 661 4.002982 CCCTCGAAGAATGTGACATTTCA 58.997 43.478 12.62 0.00 34.09 2.69
623 662 3.181506 GCCCTCGAAGAATGTGACATTTC 60.182 47.826 12.62 6.12 34.09 2.17
688 740 3.151022 GGCGAGGTGGGAGGAGAG 61.151 72.222 0.00 0.00 0.00 3.20
822 894 3.182996 GTGGTGGTGGGAGGGGTT 61.183 66.667 0.00 0.00 0.00 4.11
823 895 4.202030 AGTGGTGGTGGGAGGGGT 62.202 66.667 0.00 0.00 0.00 4.95
835 908 1.451936 GCCTGTGAGTTGGAGTGGT 59.548 57.895 0.00 0.00 0.00 4.16
840 913 2.338620 CGACGCCTGTGAGTTGGA 59.661 61.111 0.00 0.00 0.00 3.53
848 921 3.685214 GATGCTCGACGACGCCTGT 62.685 63.158 14.03 3.84 39.58 4.00
865 938 3.766691 GGGAGGCGTTACTGGCGA 61.767 66.667 0.00 0.00 39.82 5.54
867 940 1.523938 GATGGGAGGCGTTACTGGC 60.524 63.158 0.00 0.00 0.00 4.85
883 956 4.129737 CGTGGACCTCGTGCGGAT 62.130 66.667 7.79 0.00 0.00 4.18
914 987 2.572333 AAAGGCGGATGGGTGGATGG 62.572 60.000 0.00 0.00 0.00 3.51
915 988 1.076777 AAAGGCGGATGGGTGGATG 60.077 57.895 0.00 0.00 0.00 3.51
916 989 1.076777 CAAAGGCGGATGGGTGGAT 60.077 57.895 0.00 0.00 0.00 3.41
917 990 2.227757 TCAAAGGCGGATGGGTGGA 61.228 57.895 0.00 0.00 0.00 4.02
921 994 2.409870 GCAGTCAAAGGCGGATGGG 61.410 63.158 0.00 0.00 0.00 4.00
2567 2689 1.302752 TGCTGCTGCTACTTGTGGG 60.303 57.895 17.00 0.00 40.48 4.61
2627 2753 3.243907 GCTATGCTCGGGTTTCTGTATCT 60.244 47.826 0.00 0.00 0.00 1.98
2640 2766 3.749609 TGAATTGATCCATGCTATGCTCG 59.250 43.478 0.00 0.00 0.00 5.03
2641 2767 5.700722 TTGAATTGATCCATGCTATGCTC 57.299 39.130 0.00 0.00 0.00 4.26
2643 2769 5.867716 GGATTTGAATTGATCCATGCTATGC 59.132 40.000 7.05 0.00 41.21 3.14
2644 2770 6.988522 TGGATTTGAATTGATCCATGCTATG 58.011 36.000 9.58 0.00 45.14 2.23
2689 2815 6.315091 AGATTCATTCTTGCACATCTATGC 57.685 37.500 0.00 0.00 46.32 3.14
2694 2820 4.036498 CCTGGAGATTCATTCTTGCACATC 59.964 45.833 0.00 0.00 33.74 3.06
2695 2821 3.952323 CCTGGAGATTCATTCTTGCACAT 59.048 43.478 0.00 0.00 33.74 3.21
2697 2823 2.098770 GCCTGGAGATTCATTCTTGCAC 59.901 50.000 0.00 0.00 33.74 4.57
2698 2824 2.372264 GCCTGGAGATTCATTCTTGCA 58.628 47.619 0.00 0.00 33.74 4.08
2699 2825 1.332997 CGCCTGGAGATTCATTCTTGC 59.667 52.381 0.00 0.00 33.74 4.01
2700 2826 2.353889 CACGCCTGGAGATTCATTCTTG 59.646 50.000 3.87 0.00 33.74 3.02
2701 2827 2.636830 CACGCCTGGAGATTCATTCTT 58.363 47.619 3.87 0.00 33.74 2.52
2702 2828 1.134280 CCACGCCTGGAGATTCATTCT 60.134 52.381 3.87 0.00 40.55 2.40
2703 2829 1.303309 CCACGCCTGGAGATTCATTC 58.697 55.000 3.87 0.00 40.55 2.67
2705 2831 0.107508 CACCACGCCTGGAGATTCAT 60.108 55.000 8.88 0.00 40.55 2.57
2726 2865 2.881513 TCATACGGATCAGAGCAGACTC 59.118 50.000 0.00 0.00 43.82 3.36
2759 2910 4.937620 TCAAAACGATGAAGAAGATGAGGG 59.062 41.667 0.00 0.00 0.00 4.30
2760 2911 6.674694 ATCAAAACGATGAAGAAGATGAGG 57.325 37.500 0.00 0.00 31.20 3.86
2770 2921 5.925397 CCAACCAATCAATCAAAACGATGAA 59.075 36.000 0.00 0.00 33.40 2.57
2771 2922 5.010516 ACCAACCAATCAATCAAAACGATGA 59.989 36.000 0.00 0.00 33.40 2.92
2772 2923 5.118971 CACCAACCAATCAATCAAAACGATG 59.881 40.000 0.00 0.00 33.40 3.84
2774 2925 4.500545 CCACCAACCAATCAATCAAAACGA 60.501 41.667 0.00 0.00 0.00 3.85
2775 2926 3.740321 CCACCAACCAATCAATCAAAACG 59.260 43.478 0.00 0.00 0.00 3.60
2776 2927 4.702831 ACCACCAACCAATCAATCAAAAC 58.297 39.130 0.00 0.00 0.00 2.43
2779 2930 3.573538 CAGACCACCAACCAATCAATCAA 59.426 43.478 0.00 0.00 0.00 2.57
2780 2931 3.156293 CAGACCACCAACCAATCAATCA 58.844 45.455 0.00 0.00 0.00 2.57
2781 2932 3.057315 CACAGACCACCAACCAATCAATC 60.057 47.826 0.00 0.00 0.00 2.67
2782 2933 2.892852 CACAGACCACCAACCAATCAAT 59.107 45.455 0.00 0.00 0.00 2.57
2783 2934 2.305928 CACAGACCACCAACCAATCAA 58.694 47.619 0.00 0.00 0.00 2.57
2784 2935 1.214175 ACACAGACCACCAACCAATCA 59.786 47.619 0.00 0.00 0.00 2.57
2785 2936 1.981256 ACACAGACCACCAACCAATC 58.019 50.000 0.00 0.00 0.00 2.67
2786 2937 2.441750 AGTACACAGACCACCAACCAAT 59.558 45.455 0.00 0.00 0.00 3.16
2790 2941 3.131396 CTCAAGTACACAGACCACCAAC 58.869 50.000 0.00 0.00 0.00 3.77
2794 2945 2.028930 CCTCCTCAAGTACACAGACCAC 60.029 54.545 0.00 0.00 0.00 4.16
2826 2985 2.693864 AGGGTCAGGGCAGGATGG 60.694 66.667 0.00 0.00 35.86 3.51
2848 3023 4.813027 TGGAGTAGTAAAACTTACCGCAG 58.187 43.478 0.00 0.00 0.00 5.18
2849 3024 4.281688 ACTGGAGTAGTAAAACTTACCGCA 59.718 41.667 0.00 0.00 38.04 5.69
2850 3025 4.814147 ACTGGAGTAGTAAAACTTACCGC 58.186 43.478 0.00 0.00 38.04 5.68
2851 3026 5.047802 TGGACTGGAGTAGTAAAACTTACCG 60.048 44.000 0.00 0.00 40.53 4.02
2863 3038 3.880490 CTGCTACTACTGGACTGGAGTAG 59.120 52.174 18.86 18.86 45.76 2.57
2898 3085 5.296151 ACAACACAGCAGGCATATAGTAT 57.704 39.130 0.00 0.00 0.00 2.12
2899 3086 4.753516 ACAACACAGCAGGCATATAGTA 57.246 40.909 0.00 0.00 0.00 1.82
2900 3087 3.634397 ACAACACAGCAGGCATATAGT 57.366 42.857 0.00 0.00 0.00 2.12
2901 3088 3.691118 ACAACAACACAGCAGGCATATAG 59.309 43.478 0.00 0.00 0.00 1.31
2903 3090 2.517959 ACAACAACACAGCAGGCATAT 58.482 42.857 0.00 0.00 0.00 1.78
2904 3091 1.979855 ACAACAACACAGCAGGCATA 58.020 45.000 0.00 0.00 0.00 3.14
2908 3095 3.812609 TGTACATACAACAACACAGCAGG 59.187 43.478 0.00 0.00 32.40 4.85
2912 3109 7.700234 ACAACAAATGTACATACAACAACACAG 59.300 33.333 9.21 0.00 41.63 3.66
2964 3165 1.852965 CCCCTCCTATGGTGAAATGGT 59.147 52.381 0.00 0.00 0.00 3.55
2970 3171 2.022035 AGATTGACCCCTCCTATGGTGA 60.022 50.000 0.00 0.00 34.20 4.02
2971 3172 2.370189 GAGATTGACCCCTCCTATGGTG 59.630 54.545 0.00 0.00 34.20 4.17
2972 3173 2.251338 AGAGATTGACCCCTCCTATGGT 59.749 50.000 0.00 0.00 37.64 3.55
2985 3212 9.513906 TGTCATGTAACCAAAAATAGAGATTGA 57.486 29.630 0.00 0.00 0.00 2.57
3016 3244 7.664552 TCAGCATGAATGAATCCCTTTTAAT 57.335 32.000 0.00 0.00 45.97 1.40
3029 3257 7.623245 TACACTGCCTGTAATCAGCATGAATG 61.623 42.308 0.00 0.00 41.06 2.67
3076 3307 6.293626 GGACATGACAAATACATGCTCCATAC 60.294 42.308 0.00 0.00 45.95 2.39
3123 3359 6.874134 GGCGTATAAATCAAGGACACTATGAT 59.126 38.462 0.00 0.00 35.39 2.45
3124 3360 6.041637 AGGCGTATAAATCAAGGACACTATGA 59.958 38.462 0.00 0.00 0.00 2.15
3125 3361 6.223852 AGGCGTATAAATCAAGGACACTATG 58.776 40.000 0.00 0.00 0.00 2.23
3126 3362 6.041637 TGAGGCGTATAAATCAAGGACACTAT 59.958 38.462 0.00 0.00 0.00 2.12
3129 3375 4.439057 TGAGGCGTATAAATCAAGGACAC 58.561 43.478 0.00 0.00 0.00 3.67
3132 3378 5.530915 CCATTTGAGGCGTATAAATCAAGGA 59.469 40.000 0.00 0.00 33.53 3.36
3140 3386 7.558444 AGGAATAAAACCATTTGAGGCGTATAA 59.442 33.333 0.00 0.00 0.00 0.98
3207 3459 6.239217 AGCACACAGGAACATTGATAGATA 57.761 37.500 0.00 0.00 0.00 1.98
3208 3460 5.108187 AGCACACAGGAACATTGATAGAT 57.892 39.130 0.00 0.00 0.00 1.98
3209 3461 4.558226 AGCACACAGGAACATTGATAGA 57.442 40.909 0.00 0.00 0.00 1.98
3210 3462 5.877012 AGTAAGCACACAGGAACATTGATAG 59.123 40.000 0.00 0.00 0.00 2.08
3211 3463 5.804639 AGTAAGCACACAGGAACATTGATA 58.195 37.500 0.00 0.00 0.00 2.15
3212 3464 4.655963 AGTAAGCACACAGGAACATTGAT 58.344 39.130 0.00 0.00 0.00 2.57
3213 3465 4.085357 AGTAAGCACACAGGAACATTGA 57.915 40.909 0.00 0.00 0.00 2.57
3214 3466 5.536554 CTAGTAAGCACACAGGAACATTG 57.463 43.478 0.00 0.00 0.00 2.82
3239 3491 9.615660 TGGAGGGAGTACAATATATCATAAACT 57.384 33.333 0.00 0.00 0.00 2.66
3242 3494 9.213777 GGATGGAGGGAGTACAATATATCATAA 57.786 37.037 0.00 0.00 0.00 1.90
3243 3495 7.505923 CGGATGGAGGGAGTACAATATATCATA 59.494 40.741 0.00 0.00 0.00 2.15
3244 3496 6.325028 CGGATGGAGGGAGTACAATATATCAT 59.675 42.308 0.00 0.00 0.00 2.45
3245 3497 5.656859 CGGATGGAGGGAGTACAATATATCA 59.343 44.000 0.00 0.00 0.00 2.15
3246 3498 5.069251 CCGGATGGAGGGAGTACAATATATC 59.931 48.000 0.00 0.00 37.49 1.63
3247 3499 4.962995 CCGGATGGAGGGAGTACAATATAT 59.037 45.833 0.00 0.00 37.49 0.86
3248 3500 4.044952 TCCGGATGGAGGGAGTACAATATA 59.955 45.833 0.00 0.00 40.17 0.86
3249 3501 3.173965 CCGGATGGAGGGAGTACAATAT 58.826 50.000 0.00 0.00 37.49 1.28
3250 3502 2.178325 TCCGGATGGAGGGAGTACAATA 59.822 50.000 0.00 0.00 40.17 1.90
3251 3503 1.062428 TCCGGATGGAGGGAGTACAAT 60.062 52.381 0.00 0.00 40.17 2.71
3252 3504 0.337082 TCCGGATGGAGGGAGTACAA 59.663 55.000 0.00 0.00 40.17 2.41
3253 3505 2.012569 TCCGGATGGAGGGAGTACA 58.987 57.895 0.00 0.00 40.17 2.90
3261 3513 8.543352 TTTGATGACAAGTATTTCCGGATGGAG 61.543 40.741 4.15 0.00 40.39 3.86
3262 3514 4.163268 TGATGACAAGTATTTCCGGATGGA 59.837 41.667 4.15 0.00 44.61 3.41
3263 3515 4.450976 TGATGACAAGTATTTCCGGATGG 58.549 43.478 4.15 0.00 0.00 3.51
3264 3516 6.435430 TTTGATGACAAGTATTTCCGGATG 57.565 37.500 4.15 0.97 37.32 3.51
3265 3517 7.339212 TCATTTTGATGACAAGTATTTCCGGAT 59.661 33.333 4.15 0.00 37.32 4.18
3266 3518 6.657117 TCATTTTGATGACAAGTATTTCCGGA 59.343 34.615 0.00 0.00 37.32 5.14
3267 3519 6.851609 TCATTTTGATGACAAGTATTTCCGG 58.148 36.000 0.00 0.00 37.32 5.14
3268 3520 8.915871 ATTCATTTTGATGACAAGTATTTCCG 57.084 30.769 0.00 0.00 37.32 4.30
3275 3527 8.096414 CCCCTTTTATTCATTTTGATGACAAGT 58.904 33.333 0.00 0.00 37.32 3.16
3276 3528 8.313292 TCCCCTTTTATTCATTTTGATGACAAG 58.687 33.333 0.00 0.00 37.32 3.16
3277 3529 8.200024 TCCCCTTTTATTCATTTTGATGACAA 57.800 30.769 0.00 0.00 0.00 3.18
3278 3530 7.789202 TCCCCTTTTATTCATTTTGATGACA 57.211 32.000 0.00 0.00 0.00 3.58
3279 3531 8.260114 ACATCCCCTTTTATTCATTTTGATGAC 58.740 33.333 0.00 0.00 32.39 3.06
3280 3532 8.378115 ACATCCCCTTTTATTCATTTTGATGA 57.622 30.769 0.00 0.00 32.39 2.92
3283 3535 9.713684 AGATACATCCCCTTTTATTCATTTTGA 57.286 29.630 0.00 0.00 0.00 2.69
3289 3541 9.170890 ACATCTAGATACATCCCCTTTTATTCA 57.829 33.333 4.54 0.00 0.00 2.57
3297 3549 9.845214 ACTAAAATACATCTAGATACATCCCCT 57.155 33.333 4.54 0.00 0.00 4.79
3342 3594 9.045223 CGAGAATACTTGTCATCAAAATGGATA 57.955 33.333 0.00 0.00 33.42 2.59
3343 3595 7.012704 CCGAGAATACTTGTCATCAAAATGGAT 59.987 37.037 0.00 0.00 33.42 3.41
3344 3596 6.316140 CCGAGAATACTTGTCATCAAAATGGA 59.684 38.462 0.00 0.00 33.42 3.41
3345 3597 6.316140 TCCGAGAATACTTGTCATCAAAATGG 59.684 38.462 0.00 0.00 33.42 3.16
3346 3598 7.182761 GTCCGAGAATACTTGTCATCAAAATG 58.817 38.462 0.00 0.00 32.87 2.32
3347 3599 6.036083 CGTCCGAGAATACTTGTCATCAAAAT 59.964 38.462 0.00 0.00 32.87 1.82
3348 3600 5.347635 CGTCCGAGAATACTTGTCATCAAAA 59.652 40.000 0.00 0.00 32.87 2.44
3349 3601 4.862574 CGTCCGAGAATACTTGTCATCAAA 59.137 41.667 0.00 0.00 32.87 2.69
3350 3602 4.421058 CGTCCGAGAATACTTGTCATCAA 58.579 43.478 0.00 0.00 0.00 2.57
3351 3603 3.181490 CCGTCCGAGAATACTTGTCATCA 60.181 47.826 0.00 0.00 0.00 3.07
3352 3604 3.066342 TCCGTCCGAGAATACTTGTCATC 59.934 47.826 0.00 0.00 0.00 2.92
3353 3605 3.021695 TCCGTCCGAGAATACTTGTCAT 58.978 45.455 0.00 0.00 0.00 3.06
3354 3606 2.422479 CTCCGTCCGAGAATACTTGTCA 59.578 50.000 0.00 0.00 41.63 3.58
3355 3607 2.223525 CCTCCGTCCGAGAATACTTGTC 60.224 54.545 0.00 0.00 41.63 3.18
3356 3608 1.749634 CCTCCGTCCGAGAATACTTGT 59.250 52.381 0.00 0.00 41.63 3.16
3357 3609 1.067212 CCCTCCGTCCGAGAATACTTG 59.933 57.143 0.00 0.00 41.63 3.16
3358 3610 1.064166 TCCCTCCGTCCGAGAATACTT 60.064 52.381 0.00 0.00 41.63 2.24
3359 3611 0.549950 TCCCTCCGTCCGAGAATACT 59.450 55.000 0.00 0.00 41.63 2.12
3360 3612 0.953003 CTCCCTCCGTCCGAGAATAC 59.047 60.000 0.00 0.00 41.63 1.89
3361 3613 0.549950 ACTCCCTCCGTCCGAGAATA 59.450 55.000 0.00 0.00 41.63 1.75
3362 3614 0.549950 TACTCCCTCCGTCCGAGAAT 59.450 55.000 0.00 0.00 41.63 2.40
3363 3615 0.549950 ATACTCCCTCCGTCCGAGAA 59.450 55.000 0.00 0.00 41.63 2.87
3364 3616 0.549950 AATACTCCCTCCGTCCGAGA 59.450 55.000 0.00 0.00 41.63 4.04
3365 3617 1.878734 GTAATACTCCCTCCGTCCGAG 59.121 57.143 0.00 0.00 38.46 4.63
3366 3618 1.477558 GGTAATACTCCCTCCGTCCGA 60.478 57.143 0.00 0.00 0.00 4.55
3367 3619 0.957362 GGTAATACTCCCTCCGTCCG 59.043 60.000 0.00 0.00 0.00 4.79
3368 3620 2.378378 AGGTAATACTCCCTCCGTCC 57.622 55.000 0.00 0.00 0.00 4.79
3369 3621 6.661777 AGATATAGGTAATACTCCCTCCGTC 58.338 44.000 0.00 0.00 32.08 4.79
3370 3622 6.447735 AGAGATATAGGTAATACTCCCTCCGT 59.552 42.308 0.00 0.00 32.08 4.69
3371 3623 6.902408 AGAGATATAGGTAATACTCCCTCCG 58.098 44.000 0.00 0.00 32.08 4.63
3372 3624 8.337739 TCAAGAGATATAGGTAATACTCCCTCC 58.662 40.741 0.00 0.00 32.08 4.30
3373 3625 9.403583 CTCAAGAGATATAGGTAATACTCCCTC 57.596 40.741 0.00 0.00 32.08 4.30
3374 3626 7.837187 GCTCAAGAGATATAGGTAATACTCCCT 59.163 40.741 0.32 0.00 34.74 4.20
3375 3627 7.616150 TGCTCAAGAGATATAGGTAATACTCCC 59.384 40.741 0.32 0.00 0.00 4.30
3376 3628 8.582657 TGCTCAAGAGATATAGGTAATACTCC 57.417 38.462 0.32 0.00 0.00 3.85
3378 3630 9.815306 TCTTGCTCAAGAGATATAGGTAATACT 57.185 33.333 8.14 0.00 42.06 2.12
3381 3633 8.592809 CCTTCTTGCTCAAGAGATATAGGTAAT 58.407 37.037 14.64 0.00 46.80 1.89
3382 3634 7.565398 ACCTTCTTGCTCAAGAGATATAGGTAA 59.435 37.037 22.02 3.38 45.04 2.85
3383 3635 7.014711 CACCTTCTTGCTCAAGAGATATAGGTA 59.985 40.741 22.51 4.50 45.08 3.08
3384 3636 5.902431 ACCTTCTTGCTCAAGAGATATAGGT 59.098 40.000 19.54 19.54 46.80 3.08
3385 3637 6.222389 CACCTTCTTGCTCAAGAGATATAGG 58.778 44.000 18.62 18.62 46.80 2.57
3386 3638 6.183360 ACCACCTTCTTGCTCAAGAGATATAG 60.183 42.308 11.58 6.80 46.80 1.31
3387 3639 5.663106 ACCACCTTCTTGCTCAAGAGATATA 59.337 40.000 11.58 0.00 46.80 0.86
3388 3640 4.472833 ACCACCTTCTTGCTCAAGAGATAT 59.527 41.667 11.58 0.00 46.80 1.63
3389 3641 3.840666 ACCACCTTCTTGCTCAAGAGATA 59.159 43.478 11.58 0.00 46.80 1.98
3390 3642 2.641815 ACCACCTTCTTGCTCAAGAGAT 59.358 45.455 11.58 0.79 46.80 2.75
3391 3643 2.050144 ACCACCTTCTTGCTCAAGAGA 58.950 47.619 11.58 4.16 46.80 3.10
3392 3644 2.149578 CACCACCTTCTTGCTCAAGAG 58.850 52.381 11.58 5.19 46.80 2.85
3393 3645 1.815408 GCACCACCTTCTTGCTCAAGA 60.815 52.381 8.14 8.14 44.94 3.02
3394 3646 0.595095 GCACCACCTTCTTGCTCAAG 59.405 55.000 3.32 3.32 39.71 3.02
3395 3647 0.183492 AGCACCACCTTCTTGCTCAA 59.817 50.000 0.00 0.00 43.14 3.02
3396 3648 0.535780 CAGCACCACCTTCTTGCTCA 60.536 55.000 0.00 0.00 44.87 4.26
3397 3649 1.860484 GCAGCACCACCTTCTTGCTC 61.860 60.000 0.00 0.00 44.87 4.26
3399 3651 1.900498 AGCAGCACCACCTTCTTGC 60.900 57.895 0.00 0.00 36.45 4.01
3400 3652 0.535780 TCAGCAGCACCACCTTCTTG 60.536 55.000 0.00 0.00 0.00 3.02
3401 3653 0.403271 ATCAGCAGCACCACCTTCTT 59.597 50.000 0.00 0.00 0.00 2.52
3402 3654 0.403271 AATCAGCAGCACCACCTTCT 59.597 50.000 0.00 0.00 0.00 2.85
3403 3655 0.524862 CAATCAGCAGCACCACCTTC 59.475 55.000 0.00 0.00 0.00 3.46
3404 3656 0.178981 ACAATCAGCAGCACCACCTT 60.179 50.000 0.00 0.00 0.00 3.50
3405 3657 0.892358 CACAATCAGCAGCACCACCT 60.892 55.000 0.00 0.00 0.00 4.00
3406 3658 0.890542 TCACAATCAGCAGCACCACC 60.891 55.000 0.00 0.00 0.00 4.61
3407 3659 1.131883 GATCACAATCAGCAGCACCAC 59.868 52.381 0.00 0.00 31.76 4.16
3408 3660 1.003928 AGATCACAATCAGCAGCACCA 59.996 47.619 0.00 0.00 34.07 4.17
3409 3661 1.747709 AGATCACAATCAGCAGCACC 58.252 50.000 0.00 0.00 34.07 5.01
3410 3662 3.844577 AAAGATCACAATCAGCAGCAC 57.155 42.857 0.00 0.00 34.07 4.40
3411 3663 4.859304 AAAAAGATCACAATCAGCAGCA 57.141 36.364 0.00 0.00 34.07 4.41
3433 3685 5.771153 TCACAATCAGCACATCTCAAAAA 57.229 34.783 0.00 0.00 0.00 1.94
3434 3686 5.708697 AGATCACAATCAGCACATCTCAAAA 59.291 36.000 0.00 0.00 34.07 2.44
3435 3687 5.250982 AGATCACAATCAGCACATCTCAAA 58.749 37.500 0.00 0.00 34.07 2.69
3436 3688 4.840271 AGATCACAATCAGCACATCTCAA 58.160 39.130 0.00 0.00 34.07 3.02
3437 3689 4.482952 AGATCACAATCAGCACATCTCA 57.517 40.909 0.00 0.00 34.07 3.27
3438 3690 6.200665 GTCTAAGATCACAATCAGCACATCTC 59.799 42.308 0.00 0.00 34.07 2.75
3439 3691 6.047870 GTCTAAGATCACAATCAGCACATCT 58.952 40.000 0.00 0.00 34.07 2.90
3440 3692 5.814188 TGTCTAAGATCACAATCAGCACATC 59.186 40.000 0.00 0.00 34.07 3.06
3441 3693 5.737860 TGTCTAAGATCACAATCAGCACAT 58.262 37.500 0.00 0.00 34.07 3.21
3442 3694 5.151297 TGTCTAAGATCACAATCAGCACA 57.849 39.130 0.00 0.00 34.07 4.57
3443 3695 5.871524 TCTTGTCTAAGATCACAATCAGCAC 59.128 40.000 0.00 0.00 37.99 4.40
3444 3696 6.041423 TCTTGTCTAAGATCACAATCAGCA 57.959 37.500 0.00 0.00 37.99 4.41
3445 3697 6.369890 TGTTCTTGTCTAAGATCACAATCAGC 59.630 38.462 0.00 0.00 42.25 4.26
3446 3698 7.816513 TCTGTTCTTGTCTAAGATCACAATCAG 59.183 37.037 0.00 6.44 42.25 2.90
3447 3699 7.600375 GTCTGTTCTTGTCTAAGATCACAATCA 59.400 37.037 0.00 0.00 42.25 2.57
3448 3700 7.064016 GGTCTGTTCTTGTCTAAGATCACAATC 59.936 40.741 0.00 0.00 42.25 2.67
3449 3701 6.876257 GGTCTGTTCTTGTCTAAGATCACAAT 59.124 38.462 0.00 0.00 42.25 2.71
3450 3702 6.223852 GGTCTGTTCTTGTCTAAGATCACAA 58.776 40.000 0.00 0.00 42.25 3.33
3451 3703 5.564848 CGGTCTGTTCTTGTCTAAGATCACA 60.565 44.000 0.00 0.00 42.25 3.58
3452 3704 4.859798 CGGTCTGTTCTTGTCTAAGATCAC 59.140 45.833 0.00 0.00 42.25 3.06
3453 3705 4.082190 CCGGTCTGTTCTTGTCTAAGATCA 60.082 45.833 0.00 0.00 42.25 2.92
3454 3706 4.425520 CCGGTCTGTTCTTGTCTAAGATC 58.574 47.826 0.00 0.00 42.25 2.75
3455 3707 3.368531 GCCGGTCTGTTCTTGTCTAAGAT 60.369 47.826 1.90 0.00 42.25 2.40
3456 3708 2.029290 GCCGGTCTGTTCTTGTCTAAGA 60.029 50.000 1.90 0.00 41.06 2.10
3457 3709 2.288825 TGCCGGTCTGTTCTTGTCTAAG 60.289 50.000 1.90 0.00 35.16 2.18
3458 3710 1.689813 TGCCGGTCTGTTCTTGTCTAA 59.310 47.619 1.90 0.00 0.00 2.10
3459 3711 1.334160 TGCCGGTCTGTTCTTGTCTA 58.666 50.000 1.90 0.00 0.00 2.59
3460 3712 0.687354 ATGCCGGTCTGTTCTTGTCT 59.313 50.000 1.90 0.00 0.00 3.41
3461 3713 1.079503 GATGCCGGTCTGTTCTTGTC 58.920 55.000 1.90 0.00 0.00 3.18
3462 3714 0.321653 GGATGCCGGTCTGTTCTTGT 60.322 55.000 1.90 0.00 0.00 3.16
3463 3715 1.361668 CGGATGCCGGTCTGTTCTTG 61.362 60.000 1.90 0.00 44.15 3.02
3464 3716 1.079127 CGGATGCCGGTCTGTTCTT 60.079 57.895 1.90 0.00 44.15 2.52
3465 3717 2.579201 CGGATGCCGGTCTGTTCT 59.421 61.111 1.90 0.00 44.15 3.01
3475 3727 0.583438 CACATGATCGAACGGATGCC 59.417 55.000 0.00 0.00 34.82 4.40
3476 3728 1.290203 ACACATGATCGAACGGATGC 58.710 50.000 0.00 0.00 34.82 3.91
3477 3729 2.929398 TCAACACATGATCGAACGGATG 59.071 45.455 0.00 0.00 34.82 3.51
3478 3730 3.245518 TCAACACATGATCGAACGGAT 57.754 42.857 0.00 0.00 38.35 4.18
3479 3731 2.734276 TCAACACATGATCGAACGGA 57.266 45.000 0.00 0.00 31.50 4.69
3480 3732 2.929398 TCATCAACACATGATCGAACGG 59.071 45.455 0.00 0.00 45.91 4.44
3481 3733 4.582441 TTCATCAACACATGATCGAACG 57.418 40.909 0.00 0.00 45.91 3.95
3482 3734 6.237384 GCAAATTCATCAACACATGATCGAAC 60.237 38.462 0.00 0.00 45.91 3.95
3483 3735 5.801444 GCAAATTCATCAACACATGATCGAA 59.199 36.000 0.00 0.00 45.91 3.71
3484 3736 5.106237 TGCAAATTCATCAACACATGATCGA 60.106 36.000 0.00 0.00 45.91 3.59
3485 3737 5.096849 TGCAAATTCATCAACACATGATCG 58.903 37.500 0.00 0.00 45.91 3.69
3486 3738 6.327154 TCTGCAAATTCATCAACACATGATC 58.673 36.000 0.00 0.00 45.91 2.92
3488 3740 5.708877 TCTGCAAATTCATCAACACATGA 57.291 34.783 0.00 0.00 43.67 3.07
3489 3741 6.961359 AATCTGCAAATTCATCAACACATG 57.039 33.333 0.00 0.00 0.00 3.21
3490 3742 9.146984 CTTAAATCTGCAAATTCATCAACACAT 57.853 29.630 0.00 0.00 0.00 3.21
3491 3743 8.358895 TCTTAAATCTGCAAATTCATCAACACA 58.641 29.630 0.00 0.00 0.00 3.72
3492 3744 8.746922 TCTTAAATCTGCAAATTCATCAACAC 57.253 30.769 0.00 0.00 0.00 3.32
3493 3745 8.030692 CCTCTTAAATCTGCAAATTCATCAACA 58.969 33.333 0.00 0.00 0.00 3.33
3494 3746 8.031277 ACCTCTTAAATCTGCAAATTCATCAAC 58.969 33.333 0.00 0.00 0.00 3.18
3495 3747 8.125978 ACCTCTTAAATCTGCAAATTCATCAA 57.874 30.769 0.00 0.00 0.00 2.57
3496 3748 7.707624 ACCTCTTAAATCTGCAAATTCATCA 57.292 32.000 0.00 0.00 0.00 3.07
3503 3755 9.120538 GGTGATATTACCTCTTAAATCTGCAAA 57.879 33.333 9.39 0.00 37.74 3.68
3504 3756 7.441157 CGGTGATATTACCTCTTAAATCTGCAA 59.559 37.037 14.25 0.00 38.62 4.08
3505 3757 6.929049 CGGTGATATTACCTCTTAAATCTGCA 59.071 38.462 14.25 0.00 38.62 4.41
3506 3758 6.369065 CCGGTGATATTACCTCTTAAATCTGC 59.631 42.308 14.25 0.00 38.62 4.26
3507 3759 7.442656 ACCGGTGATATTACCTCTTAAATCTG 58.557 38.462 6.12 0.00 38.62 2.90
3508 3760 7.613551 ACCGGTGATATTACCTCTTAAATCT 57.386 36.000 6.12 0.00 38.62 2.40
3509 3761 8.583296 ACTACCGGTGATATTACCTCTTAAATC 58.417 37.037 19.93 0.00 38.62 2.17
3510 3762 8.488308 ACTACCGGTGATATTACCTCTTAAAT 57.512 34.615 19.93 0.00 38.62 1.40
3511 3763 7.560991 TGACTACCGGTGATATTACCTCTTAAA 59.439 37.037 19.93 0.00 38.62 1.52
3512 3764 7.062322 TGACTACCGGTGATATTACCTCTTAA 58.938 38.462 19.93 0.00 38.62 1.85
3513 3765 6.604171 TGACTACCGGTGATATTACCTCTTA 58.396 40.000 19.93 2.73 38.62 2.10
3514 3766 5.452255 TGACTACCGGTGATATTACCTCTT 58.548 41.667 19.93 1.75 38.62 2.85
3515 3767 5.057843 TGACTACCGGTGATATTACCTCT 57.942 43.478 19.93 2.30 38.62 3.69
3516 3768 5.979288 ATGACTACCGGTGATATTACCTC 57.021 43.478 19.93 5.67 38.62 3.85
3517 3769 6.787170 TCTATGACTACCGGTGATATTACCT 58.213 40.000 19.93 0.00 38.62 3.08
3518 3770 7.176340 AGTTCTATGACTACCGGTGATATTACC 59.824 40.741 19.93 6.60 37.37 2.85
3519 3771 8.108551 AGTTCTATGACTACCGGTGATATTAC 57.891 38.462 19.93 4.47 0.00 1.89
3520 3772 8.573885 CAAGTTCTATGACTACCGGTGATATTA 58.426 37.037 19.93 2.77 0.00 0.98
3521 3773 7.434492 CAAGTTCTATGACTACCGGTGATATT 58.566 38.462 19.93 1.54 0.00 1.28
3522 3774 6.516860 GCAAGTTCTATGACTACCGGTGATAT 60.517 42.308 19.93 8.93 0.00 1.63
3523 3775 5.221185 GCAAGTTCTATGACTACCGGTGATA 60.221 44.000 19.93 7.27 0.00 2.15
3524 3776 4.441634 GCAAGTTCTATGACTACCGGTGAT 60.442 45.833 19.93 4.35 0.00 3.06
3525 3777 3.119245 GCAAGTTCTATGACTACCGGTGA 60.119 47.826 19.93 0.00 0.00 4.02
3526 3778 3.187700 GCAAGTTCTATGACTACCGGTG 58.812 50.000 19.93 10.05 0.00 4.94
3527 3779 2.159282 CGCAAGTTCTATGACTACCGGT 60.159 50.000 13.98 13.98 0.00 5.28
3528 3780 2.460918 CGCAAGTTCTATGACTACCGG 58.539 52.381 0.00 0.00 0.00 5.28
3543 3795 2.124011 AACTGAACATGCAACGCAAG 57.876 45.000 0.00 0.00 43.62 4.01
3544 3796 2.575694 AAACTGAACATGCAACGCAA 57.424 40.000 0.00 0.00 43.62 4.85
3545 3797 2.191802 CAAAACTGAACATGCAACGCA 58.808 42.857 0.00 0.00 44.86 5.24
3546 3798 2.034675 CACAAAACTGAACATGCAACGC 60.035 45.455 0.00 0.00 0.00 4.84
3547 3799 2.034675 GCACAAAACTGAACATGCAACG 60.035 45.455 0.00 0.00 33.27 4.10
3548 3800 3.189285 AGCACAAAACTGAACATGCAAC 58.811 40.909 0.00 0.00 35.51 4.17
3549 3801 3.523606 AGCACAAAACTGAACATGCAA 57.476 38.095 0.00 0.00 35.51 4.08
3550 3802 4.645762 TTAGCACAAAACTGAACATGCA 57.354 36.364 0.00 0.00 35.51 3.96
3551 3803 5.519927 AGTTTTAGCACAAAACTGAACATGC 59.480 36.000 21.56 0.00 45.58 4.06
3552 3804 7.524294 AAGTTTTAGCACAAAACTGAACATG 57.476 32.000 22.43 0.00 46.33 3.21


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.