Multiple sequence alignment - TraesCS1B01G433500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G433500 chr1B 100.000 3424 0 0 1 3424 658188376 658191799 0.000000e+00 6324.0
1 TraesCS1B01G433500 chr1B 84.483 348 40 11 1020 1361 658438639 658438978 7.080000e-87 331.0
2 TraesCS1B01G433500 chr1B 85.202 223 28 4 1126 1345 661131504 661131724 1.240000e-54 224.0
3 TraesCS1B01G433500 chr1B 89.474 171 18 0 2 172 658147710 658147880 2.070000e-52 217.0
4 TraesCS1B01G433500 chr1B 88.889 171 19 0 2 172 658105439 658105609 9.630000e-51 211.0
5 TraesCS1B01G433500 chr1B 88.268 179 18 3 288 464 658148277 658148454 9.630000e-51 211.0
6 TraesCS1B01G433500 chr1B 84.916 179 19 4 288 464 658106006 658106178 1.260000e-39 174.0
7 TraesCS1B01G433500 chr1B 92.958 71 5 0 2562 2632 478897854 478897784 1.680000e-18 104.0
8 TraesCS1B01G433500 chr1B 87.671 73 8 1 108 179 658108406 658108478 2.190000e-12 84.2
9 TraesCS1B01G433500 chr1B 87.671 73 8 1 108 179 658150726 658150798 2.190000e-12 84.2
10 TraesCS1B01G433500 chr1D 90.858 886 48 11 1642 2494 473338137 473339022 0.000000e+00 1157.0
11 TraesCS1B01G433500 chr1D 90.336 714 44 15 754 1453 473337240 473337942 0.000000e+00 913.0
12 TraesCS1B01G433500 chr1D 90.523 707 40 10 2696 3376 473342156 473342861 0.000000e+00 909.0
13 TraesCS1B01G433500 chr1D 78.308 1300 189 64 1020 2271 473517975 473519229 0.000000e+00 752.0
14 TraesCS1B01G433500 chr1D 86.207 145 20 0 1458 1602 473337986 473338130 1.270000e-34 158.0
15 TraesCS1B01G433500 chr1A 78.132 1349 185 58 1020 2292 567598470 567599784 0.000000e+00 756.0
16 TraesCS1B01G433500 chr1A 89.435 407 38 3 170 572 567451283 567451688 3.050000e-140 508.0
17 TraesCS1B01G433500 chr1A 89.908 218 16 5 170 384 567456791 567457005 3.370000e-70 276.0
18 TraesCS1B01G433500 chr1A 87.398 246 19 12 470 705 567457303 567457546 4.350000e-69 272.0
19 TraesCS1B01G433500 chr1A 96.273 161 5 1 829 988 567461385 567461545 2.620000e-66 263.0
20 TraesCS1B01G433500 chr1A 81.132 212 27 6 1126 1326 570916855 570917064 1.270000e-34 158.0
21 TraesCS1B01G433500 chr1A 92.958 71 5 0 2562 2632 533318606 533318536 1.680000e-18 104.0
22 TraesCS1B01G433500 chr1A 95.745 47 1 1 745 791 567461350 567461395 1.320000e-09 75.0
23 TraesCS1B01G433500 chr6B 77.626 657 100 30 1794 2427 76216741 76216109 4.200000e-94 355.0
24 TraesCS1B01G433500 chr6B 88.298 188 19 2 1156 1343 76217496 76217312 4.450000e-54 222.0
25 TraesCS1B01G433500 chr6A 82.857 350 48 10 1003 1349 40581589 40581249 1.540000e-78 303.0
26 TraesCS1B01G433500 chr7A 92.000 75 5 1 2563 2636 609380346 609380272 1.680000e-18 104.0
27 TraesCS1B01G433500 chr3D 92.958 71 5 0 2562 2632 591097508 591097438 1.680000e-18 104.0
28 TraesCS1B01G433500 chr7D 90.909 77 6 1 2556 2632 141345643 141345568 6.050000e-18 102.0
29 TraesCS1B01G433500 chr5D 91.781 73 6 0 2560 2632 491769402 491769330 6.050000e-18 102.0
30 TraesCS1B01G433500 chr5B 90.789 76 7 0 2557 2632 403423360 403423285 6.050000e-18 102.0
31 TraesCS1B01G433500 chr7B 89.873 79 6 2 2555 2632 387641886 387641809 2.170000e-17 100.0
32 TraesCS1B01G433500 chr7B 89.873 79 7 1 2555 2632 461232133 461232211 2.170000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G433500 chr1B 658188376 658191799 3423 False 6324.00 6324 100.000 1 3424 1 chr1B.!!$F1 3423
1 TraesCS1B01G433500 chr1D 473337240 473342861 5621 False 784.25 1157 89.481 754 3376 4 chr1D.!!$F2 2622
2 TraesCS1B01G433500 chr1D 473517975 473519229 1254 False 752.00 752 78.308 1020 2271 1 chr1D.!!$F1 1251
3 TraesCS1B01G433500 chr1A 567598470 567599784 1314 False 756.00 756 78.132 1020 2292 1 chr1A.!!$F2 1272
4 TraesCS1B01G433500 chr1A 567456791 567461545 4754 False 221.50 276 92.331 170 988 4 chr1A.!!$F4 818
5 TraesCS1B01G433500 chr6B 76216109 76217496 1387 True 288.50 355 82.962 1156 2427 2 chr6B.!!$R1 1271

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
821 4893 0.17899 AGTTGGGGACTTCCTTGTGC 60.179 55.0 0.0 0.0 33.92 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2611 10003 0.036765 GTGTGCGTTCATAGGGGTGA 60.037 55.0 0.0 0.0 0.0 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.715295 AAGCTAGGCCCTGGAATGT 58.285 52.632 0.00 0.00 0.00 2.71
19 20 0.548510 AAGCTAGGCCCTGGAATGTC 59.451 55.000 0.00 0.00 0.00 3.06
20 21 0.621571 AGCTAGGCCCTGGAATGTCA 60.622 55.000 0.00 0.00 0.00 3.58
21 22 0.179034 GCTAGGCCCTGGAATGTCAG 60.179 60.000 0.00 0.00 34.70 3.51
22 23 1.207791 CTAGGCCCTGGAATGTCAGT 58.792 55.000 0.00 0.00 33.14 3.41
23 24 2.398588 CTAGGCCCTGGAATGTCAGTA 58.601 52.381 0.00 0.00 33.14 2.74
24 25 1.668826 AGGCCCTGGAATGTCAGTAA 58.331 50.000 0.00 0.00 33.14 2.24
25 26 2.208872 AGGCCCTGGAATGTCAGTAAT 58.791 47.619 0.00 0.00 33.14 1.89
26 27 3.393687 AGGCCCTGGAATGTCAGTAATA 58.606 45.455 0.00 0.00 33.14 0.98
27 28 3.983410 AGGCCCTGGAATGTCAGTAATAT 59.017 43.478 0.00 0.00 33.14 1.28
28 29 4.416848 AGGCCCTGGAATGTCAGTAATATT 59.583 41.667 0.00 0.00 33.14 1.28
29 30 4.520492 GGCCCTGGAATGTCAGTAATATTG 59.480 45.833 0.00 0.00 33.14 1.90
30 31 5.133221 GCCCTGGAATGTCAGTAATATTGT 58.867 41.667 0.00 0.00 33.14 2.71
31 32 5.239525 GCCCTGGAATGTCAGTAATATTGTC 59.760 44.000 0.00 0.00 33.14 3.18
32 33 6.595682 CCCTGGAATGTCAGTAATATTGTCT 58.404 40.000 0.00 0.00 33.14 3.41
33 34 7.056635 CCCTGGAATGTCAGTAATATTGTCTT 58.943 38.462 0.00 0.00 33.14 3.01
34 35 7.557719 CCCTGGAATGTCAGTAATATTGTCTTT 59.442 37.037 0.00 0.00 33.14 2.52
35 36 8.960591 CCTGGAATGTCAGTAATATTGTCTTTT 58.039 33.333 0.00 0.00 33.14 2.27
68 69 8.892887 TTTTCAATGTTGCATTTTTCTTTGAC 57.107 26.923 0.00 0.00 0.00 3.18
69 70 7.606858 TTCAATGTTGCATTTTTCTTTGACA 57.393 28.000 0.00 0.00 0.00 3.58
70 71 7.789273 TCAATGTTGCATTTTTCTTTGACAT 57.211 28.000 0.00 0.00 0.00 3.06
71 72 7.631822 TCAATGTTGCATTTTTCTTTGACATG 58.368 30.769 0.00 0.00 0.00 3.21
72 73 5.406767 TGTTGCATTTTTCTTTGACATGC 57.593 34.783 0.00 0.00 40.61 4.06
73 74 5.117584 TGTTGCATTTTTCTTTGACATGCT 58.882 33.333 0.00 0.00 40.79 3.79
74 75 6.279123 TGTTGCATTTTTCTTTGACATGCTA 58.721 32.000 0.00 0.00 40.79 3.49
75 76 6.760298 TGTTGCATTTTTCTTTGACATGCTAA 59.240 30.769 0.00 0.00 40.79 3.09
76 77 6.768029 TGCATTTTTCTTTGACATGCTAAC 57.232 33.333 0.00 0.00 40.79 2.34
77 78 6.279123 TGCATTTTTCTTTGACATGCTAACA 58.721 32.000 0.00 0.00 40.79 2.41
78 79 6.421501 TGCATTTTTCTTTGACATGCTAACAG 59.578 34.615 0.00 0.00 40.79 3.16
79 80 6.617105 GCATTTTTCTTTGACATGCTAACAGC 60.617 38.462 0.00 0.00 42.82 4.40
80 81 4.503741 TTTCTTTGACATGCTAACAGCC 57.496 40.909 0.00 0.00 41.51 4.85
81 82 3.423539 TCTTTGACATGCTAACAGCCT 57.576 42.857 0.00 0.00 41.51 4.58
82 83 3.076621 TCTTTGACATGCTAACAGCCTG 58.923 45.455 0.00 2.42 41.51 4.85
86 87 2.276732 ACATGCTAACAGCCTGTGTT 57.723 45.000 0.00 0.00 45.95 3.32
98 99 6.095432 ACAGCCTGTGTTTATTTTTATGCA 57.905 33.333 0.00 0.00 34.94 3.96
99 100 5.925969 ACAGCCTGTGTTTATTTTTATGCAC 59.074 36.000 0.00 0.00 34.94 4.57
100 101 5.925397 CAGCCTGTGTTTATTTTTATGCACA 59.075 36.000 0.00 0.00 35.83 4.57
101 102 5.925969 AGCCTGTGTTTATTTTTATGCACAC 59.074 36.000 0.00 0.00 36.00 3.82
102 103 5.694006 GCCTGTGTTTATTTTTATGCACACA 59.306 36.000 0.00 3.16 41.61 3.72
103 104 6.346518 GCCTGTGTTTATTTTTATGCACACAC 60.347 38.462 0.00 0.00 39.58 3.82
104 105 6.699204 CCTGTGTTTATTTTTATGCACACACA 59.301 34.615 0.00 0.00 39.58 3.72
105 106 7.306515 CCTGTGTTTATTTTTATGCACACACAC 60.307 37.037 0.00 0.00 39.58 3.82
106 107 7.035612 TGTGTTTATTTTTATGCACACACACA 58.964 30.769 0.00 0.00 39.58 3.72
107 108 7.708322 TGTGTTTATTTTTATGCACACACACAT 59.292 29.630 0.00 0.00 39.58 3.21
108 109 8.003224 GTGTTTATTTTTATGCACACACACATG 58.997 33.333 0.00 0.00 35.61 3.21
109 110 6.702972 TTATTTTTATGCACACACACATGC 57.297 33.333 0.00 0.00 42.40 4.06
110 111 2.328655 TTTATGCACACACACATGCG 57.671 45.000 0.00 0.00 45.13 4.73
111 112 0.520847 TTATGCACACACACATGCGG 59.479 50.000 0.00 0.00 45.13 5.69
112 113 1.921045 TATGCACACACACATGCGGC 61.921 55.000 0.00 0.00 45.13 6.53
113 114 3.963647 GCACACACACATGCGGCA 61.964 61.111 4.58 4.58 30.97 5.69
114 115 2.956194 CACACACACATGCGGCAT 59.044 55.556 10.23 10.23 0.00 4.40
115 116 1.443025 CACACACACATGCGGCATG 60.443 57.895 34.64 34.64 46.18 4.06
122 123 3.582148 CATGCGGCATGTGACTGT 58.418 55.556 29.95 0.00 37.12 3.55
123 124 1.135939 CATGCGGCATGTGACTGTG 59.864 57.895 29.95 8.09 37.12 3.66
124 125 1.003476 ATGCGGCATGTGACTGTGA 60.003 52.632 15.87 0.00 0.00 3.58
125 126 1.300971 ATGCGGCATGTGACTGTGAC 61.301 55.000 15.87 0.00 0.00 3.67
126 127 1.669115 GCGGCATGTGACTGTGACT 60.669 57.895 0.00 0.00 0.00 3.41
127 128 1.230635 GCGGCATGTGACTGTGACTT 61.231 55.000 0.00 0.00 0.00 3.01
128 129 1.229428 CGGCATGTGACTGTGACTTT 58.771 50.000 0.00 0.00 0.00 2.66
129 130 1.069703 CGGCATGTGACTGTGACTTTG 60.070 52.381 0.00 0.00 0.00 2.77
130 131 1.267806 GGCATGTGACTGTGACTTTGG 59.732 52.381 0.00 0.00 0.00 3.28
131 132 1.267806 GCATGTGACTGTGACTTTGGG 59.732 52.381 0.00 0.00 0.00 4.12
132 133 1.267806 CATGTGACTGTGACTTTGGGC 59.732 52.381 0.00 0.00 0.00 5.36
133 134 0.546122 TGTGACTGTGACTTTGGGCT 59.454 50.000 0.00 0.00 0.00 5.19
134 135 1.064758 TGTGACTGTGACTTTGGGCTT 60.065 47.619 0.00 0.00 0.00 4.35
135 136 1.604278 GTGACTGTGACTTTGGGCTTC 59.396 52.381 0.00 0.00 0.00 3.86
136 137 1.211703 TGACTGTGACTTTGGGCTTCA 59.788 47.619 0.00 0.00 0.00 3.02
137 138 2.158623 TGACTGTGACTTTGGGCTTCAT 60.159 45.455 0.00 0.00 0.00 2.57
138 139 2.887152 GACTGTGACTTTGGGCTTCATT 59.113 45.455 0.00 0.00 0.00 2.57
139 140 3.299503 ACTGTGACTTTGGGCTTCATTT 58.700 40.909 0.00 0.00 0.00 2.32
140 141 4.469657 ACTGTGACTTTGGGCTTCATTTA 58.530 39.130 0.00 0.00 0.00 1.40
141 142 4.278419 ACTGTGACTTTGGGCTTCATTTAC 59.722 41.667 0.00 0.00 0.00 2.01
142 143 4.211125 TGTGACTTTGGGCTTCATTTACA 58.789 39.130 0.00 0.00 0.00 2.41
143 144 4.646945 TGTGACTTTGGGCTTCATTTACAA 59.353 37.500 0.00 0.00 0.00 2.41
144 145 5.127845 TGTGACTTTGGGCTTCATTTACAAA 59.872 36.000 0.00 0.00 0.00 2.83
147 148 5.467035 CTTTGGGCTTCATTTACAAAGGA 57.533 39.130 0.00 0.00 42.43 3.36
148 149 6.041423 CTTTGGGCTTCATTTACAAAGGAT 57.959 37.500 0.00 0.00 42.43 3.24
149 150 5.404466 TTGGGCTTCATTTACAAAGGATG 57.596 39.130 0.00 0.00 0.00 3.51
150 151 3.768757 TGGGCTTCATTTACAAAGGATGG 59.231 43.478 4.96 0.00 0.00 3.51
151 152 3.132824 GGGCTTCATTTACAAAGGATGGG 59.867 47.826 4.96 0.00 0.00 4.00
152 153 3.769300 GGCTTCATTTACAAAGGATGGGT 59.231 43.478 4.96 0.00 0.00 4.51
153 154 4.222810 GGCTTCATTTACAAAGGATGGGTT 59.777 41.667 4.96 0.00 0.00 4.11
154 155 5.410924 GCTTCATTTACAAAGGATGGGTTC 58.589 41.667 4.96 0.00 0.00 3.62
155 156 5.047377 GCTTCATTTACAAAGGATGGGTTCA 60.047 40.000 4.96 0.00 0.00 3.18
156 157 6.351286 GCTTCATTTACAAAGGATGGGTTCAT 60.351 38.462 4.96 0.00 36.09 2.57
157 158 6.528537 TCATTTACAAAGGATGGGTTCATG 57.471 37.500 0.00 0.00 32.98 3.07
158 159 4.799564 TTTACAAAGGATGGGTTCATGC 57.200 40.909 0.00 0.00 41.31 4.06
166 167 3.356290 GGATGGGTTCATGCTACAAAGT 58.644 45.455 0.00 0.00 38.48 2.66
167 168 3.763897 GGATGGGTTCATGCTACAAAGTT 59.236 43.478 0.00 0.00 38.48 2.66
168 169 4.380867 GGATGGGTTCATGCTACAAAGTTG 60.381 45.833 0.00 0.00 38.48 3.16
204 207 6.959639 ACCAGAGTTTGAACAACACATATT 57.040 33.333 0.00 0.00 0.00 1.28
293 296 4.437390 GCGTCGATCAATTTCCAATCTTGT 60.437 41.667 0.00 0.00 0.00 3.16
345 349 7.882791 TGAGTACCGGCATTCAATATTATTCAT 59.117 33.333 0.00 0.00 0.00 2.57
373 377 3.305964 CGTTGACGTAACTGTGATGACT 58.694 45.455 0.00 0.00 37.13 3.41
375 379 3.297830 TGACGTAACTGTGATGACTGG 57.702 47.619 0.00 0.00 0.00 4.00
378 382 1.726791 CGTAACTGTGATGACTGGCAC 59.273 52.381 0.00 0.00 35.63 5.01
384 388 1.338105 TGTGATGACTGGCACTAGCAC 60.338 52.381 0.00 0.00 44.61 4.40
386 390 1.205655 TGATGACTGGCACTAGCACTC 59.794 52.381 0.00 0.00 44.61 3.51
387 391 0.539051 ATGACTGGCACTAGCACTCC 59.461 55.000 0.00 0.00 44.61 3.85
389 393 0.539051 GACTGGCACTAGCACTCCAT 59.461 55.000 0.00 0.00 44.61 3.41
390 394 0.987294 ACTGGCACTAGCACTCCATT 59.013 50.000 0.00 0.00 44.61 3.16
391 395 1.352352 ACTGGCACTAGCACTCCATTT 59.648 47.619 0.00 0.00 44.61 2.32
392 396 1.741706 CTGGCACTAGCACTCCATTTG 59.258 52.381 0.00 0.00 44.61 2.32
393 397 1.350684 TGGCACTAGCACTCCATTTGA 59.649 47.619 0.00 0.00 44.61 2.69
394 398 2.025981 TGGCACTAGCACTCCATTTGAT 60.026 45.455 0.00 0.00 44.61 2.57
395 399 3.199727 TGGCACTAGCACTCCATTTGATA 59.800 43.478 0.00 0.00 44.61 2.15
396 400 4.141413 TGGCACTAGCACTCCATTTGATAT 60.141 41.667 0.00 0.00 44.61 1.63
397 401 4.214971 GGCACTAGCACTCCATTTGATATG 59.785 45.833 0.00 0.00 44.61 1.78
398 402 4.818546 GCACTAGCACTCCATTTGATATGT 59.181 41.667 0.00 0.00 41.58 2.29
399 403 5.277683 GCACTAGCACTCCATTTGATATGTG 60.278 44.000 0.00 0.00 41.58 3.21
402 406 4.374843 GCACTCCATTTGATATGTGCAA 57.625 40.909 10.44 0.00 46.64 4.08
403 407 4.746729 GCACTCCATTTGATATGTGCAAA 58.253 39.130 10.44 0.00 46.64 3.68
404 408 4.563976 GCACTCCATTTGATATGTGCAAAC 59.436 41.667 10.44 0.00 46.64 2.93
405 409 5.104374 CACTCCATTTGATATGTGCAAACC 58.896 41.667 0.00 0.00 37.98 3.27
406 410 4.771577 ACTCCATTTGATATGTGCAAACCA 59.228 37.500 0.00 0.00 37.98 3.67
407 411 5.245751 ACTCCATTTGATATGTGCAAACCAA 59.754 36.000 0.00 0.00 37.98 3.67
408 412 6.070653 ACTCCATTTGATATGTGCAAACCAAT 60.071 34.615 0.00 0.00 37.98 3.16
409 413 7.123997 ACTCCATTTGATATGTGCAAACCAATA 59.876 33.333 0.00 0.00 37.98 1.90
410 414 7.264221 TCCATTTGATATGTGCAAACCAATAC 58.736 34.615 0.00 0.00 37.98 1.89
411 415 7.040494 CCATTTGATATGTGCAAACCAATACA 58.960 34.615 0.00 0.00 37.98 2.29
412 416 7.711772 CCATTTGATATGTGCAAACCAATACAT 59.288 33.333 0.00 0.00 37.98 2.29
413 417 9.747293 CATTTGATATGTGCAAACCAATACATA 57.253 29.630 0.00 0.00 39.49 2.29
415 419 9.579768 TTTGATATGTGCAAACCAATACATAAC 57.420 29.630 0.00 0.00 38.88 1.89
416 420 8.518430 TGATATGTGCAAACCAATACATAACT 57.482 30.769 0.00 0.00 38.88 2.24
417 421 8.404765 TGATATGTGCAAACCAATACATAACTG 58.595 33.333 0.00 0.00 38.88 3.16
439 443 9.676861 AACTGTTTCCTACTTAACTTTTGTAGT 57.323 29.630 0.00 0.00 39.32 2.73
505 750 4.176271 GCATCCTCATGGCAAGTAAAAAC 58.824 43.478 0.00 0.00 0.00 2.43
507 752 5.782047 CATCCTCATGGCAAGTAAAAACAA 58.218 37.500 0.00 0.00 0.00 2.83
510 755 6.644347 TCCTCATGGCAAGTAAAAACAAAAA 58.356 32.000 0.00 0.00 0.00 1.94
511 756 7.278875 TCCTCATGGCAAGTAAAAACAAAAAT 58.721 30.769 0.00 0.00 0.00 1.82
512 757 8.424918 TCCTCATGGCAAGTAAAAACAAAAATA 58.575 29.630 0.00 0.00 0.00 1.40
513 758 9.050601 CCTCATGGCAAGTAAAAACAAAAATAA 57.949 29.630 0.00 0.00 0.00 1.40
514 759 9.862585 CTCATGGCAAGTAAAAACAAAAATAAC 57.137 29.630 0.00 0.00 0.00 1.89
515 760 8.543774 TCATGGCAAGTAAAAACAAAAATAACG 58.456 29.630 0.00 0.00 0.00 3.18
516 761 8.543774 CATGGCAAGTAAAAACAAAAATAACGA 58.456 29.630 0.00 0.00 0.00 3.85
517 762 8.475331 TGGCAAGTAAAAACAAAAATAACGAA 57.525 26.923 0.00 0.00 0.00 3.85
518 763 8.596380 TGGCAAGTAAAAACAAAAATAACGAAG 58.404 29.630 0.00 0.00 0.00 3.79
592 839 4.520179 ACTTTACCCCGCTAAACTATTGG 58.480 43.478 0.00 0.00 0.00 3.16
678 925 7.627585 TTTTTCTCAAATTTCAGAATGCTCG 57.372 32.000 5.28 0.00 34.76 5.03
679 926 4.346734 TCTCAAATTTCAGAATGCTCGC 57.653 40.909 0.00 0.00 34.76 5.03
680 927 3.752747 TCTCAAATTTCAGAATGCTCGCA 59.247 39.130 0.00 0.00 34.76 5.10
682 929 5.585844 TCTCAAATTTCAGAATGCTCGCATA 59.414 36.000 4.63 0.00 35.31 3.14
683 930 6.261603 TCTCAAATTTCAGAATGCTCGCATAT 59.738 34.615 4.63 0.00 35.31 1.78
684 931 7.442062 TCTCAAATTTCAGAATGCTCGCATATA 59.558 33.333 4.63 0.00 35.31 0.86
685 932 8.102800 TCAAATTTCAGAATGCTCGCATATAT 57.897 30.769 4.63 0.00 35.31 0.86
686 933 9.218440 TCAAATTTCAGAATGCTCGCATATATA 57.782 29.630 4.63 0.00 35.31 0.86
687 934 9.999009 CAAATTTCAGAATGCTCGCATATATAT 57.001 29.630 4.63 0.00 35.31 0.86
790 4862 3.650950 GCTGCACCCCCTCCTGAA 61.651 66.667 0.00 0.00 0.00 3.02
791 4863 2.352805 CTGCACCCCCTCCTGAAC 59.647 66.667 0.00 0.00 0.00 3.18
792 4864 3.612247 CTGCACCCCCTCCTGAACG 62.612 68.421 0.00 0.00 0.00 3.95
793 4865 4.410400 GCACCCCCTCCTGAACGG 62.410 72.222 0.00 0.00 0.00 4.44
794 4866 3.717294 CACCCCCTCCTGAACGGG 61.717 72.222 0.00 0.00 41.71 5.28
797 4869 4.101448 CCCCTCCTGAACGGGCTG 62.101 72.222 0.00 0.00 39.22 4.85
798 4870 4.101448 CCCTCCTGAACGGGCTGG 62.101 72.222 0.00 0.00 32.83 4.85
799 4871 4.785453 CCTCCTGAACGGGCTGGC 62.785 72.222 0.00 0.00 0.00 4.85
800 4872 4.785453 CTCCTGAACGGGCTGGCC 62.785 72.222 10.75 10.75 0.00 5.36
818 4890 3.346426 CCAGTTGGGGACTTCCTTG 57.654 57.895 0.00 0.00 36.10 3.61
819 4891 0.478507 CCAGTTGGGGACTTCCTTGT 59.521 55.000 0.00 0.00 36.10 3.16
820 4892 1.609208 CAGTTGGGGACTTCCTTGTG 58.391 55.000 0.00 0.00 36.10 3.33
821 4893 0.178990 AGTTGGGGACTTCCTTGTGC 60.179 55.000 0.00 0.00 33.92 4.57
822 4894 0.467290 GTTGGGGACTTCCTTGTGCA 60.467 55.000 0.00 0.00 35.95 4.57
823 4895 0.482446 TTGGGGACTTCCTTGTGCAT 59.518 50.000 0.00 0.00 35.95 3.96
824 4896 0.482446 TGGGGACTTCCTTGTGCATT 59.518 50.000 0.00 0.00 35.95 3.56
825 4897 0.890683 GGGGACTTCCTTGTGCATTG 59.109 55.000 0.00 0.00 35.95 2.82
826 4898 0.890683 GGGACTTCCTTGTGCATTGG 59.109 55.000 0.00 0.00 35.95 3.16
827 4899 0.890683 GGACTTCCTTGTGCATTGGG 59.109 55.000 0.00 0.00 0.00 4.12
828 4900 0.244721 GACTTCCTTGTGCATTGGGC 59.755 55.000 0.00 0.00 45.13 5.36
829 4901 1.187567 ACTTCCTTGTGCATTGGGCC 61.188 55.000 0.00 0.00 43.89 5.80
843 4915 3.706373 GGCCGCCTCTGAAGGACA 61.706 66.667 0.71 0.00 46.67 4.02
851 4923 0.393537 CTCTGAAGGACATGTGGGCC 60.394 60.000 1.15 0.00 0.00 5.80
889 4961 2.614057 CGCTCGCCAGGAGAAATTTTAT 59.386 45.455 0.00 0.00 46.23 1.40
935 5008 4.581824 GCTGCTGGAATCCTAATTCATCAA 59.418 41.667 0.00 0.00 42.66 2.57
988 5061 3.126001 TCGACTCCAAATGCATATCCC 57.874 47.619 0.00 0.00 0.00 3.85
989 5062 2.437651 TCGACTCCAAATGCATATCCCA 59.562 45.455 0.00 0.00 0.00 4.37
990 5063 3.118075 TCGACTCCAAATGCATATCCCAA 60.118 43.478 0.00 0.00 0.00 4.12
993 5066 5.649395 CGACTCCAAATGCATATCCCAATAT 59.351 40.000 0.00 0.00 0.00 1.28
994 5067 6.823182 CGACTCCAAATGCATATCCCAATATA 59.177 38.462 0.00 0.00 0.00 0.86
1029 5111 0.034198 TCACGCCACGAGGAATCAAA 59.966 50.000 1.86 0.00 36.89 2.69
1072 5154 2.040213 GATCGACATTGCACCTGCGG 62.040 60.000 0.00 0.00 45.83 5.69
1102 5189 1.136690 GCGATATTGTTCGGCATCGA 58.863 50.000 6.98 0.00 42.11 3.59
1356 5443 2.665185 GAACCAAGCACCGTCGCT 60.665 61.111 0.00 0.00 46.67 4.93
1381 5507 4.796231 CCCTCGTCGCCTCGGTTG 62.796 72.222 0.00 0.00 0.00 3.77
1453 5630 2.096218 GCAGCTCGTGTTTACCAAGAAG 60.096 50.000 0.00 0.00 30.94 2.85
1455 5677 1.871039 GCTCGTGTTTACCAAGAAGCA 59.129 47.619 0.00 0.00 30.94 3.91
1479 5701 0.753848 TGGCGATAGTGATCCACGGA 60.754 55.000 0.00 0.00 39.64 4.69
1483 5705 1.947456 CGATAGTGATCCACGGAGACA 59.053 52.381 0.00 0.00 39.64 3.41
1488 5710 2.069273 GTGATCCACGGAGACAACAAG 58.931 52.381 0.00 0.00 0.00 3.16
1492 5714 0.105964 CCACGGAGACAACAAGGTCA 59.894 55.000 0.00 0.00 40.29 4.02
1549 5771 2.361104 GTTCCCCGGCAGCAATGA 60.361 61.111 0.00 0.00 0.00 2.57
1622 5850 1.534175 CGGAATAGTCTCGCACCTGTC 60.534 57.143 0.00 0.00 0.00 3.51
1719 5953 3.294214 GTTCTCCATTGAGCCCATTGAT 58.706 45.455 0.00 0.00 38.58 2.57
1731 5965 0.813610 CCATTGATGCCGTTCCGCTA 60.814 55.000 0.00 0.00 0.00 4.26
1965 6232 4.728102 CGTCACGCCGCCAACCTA 62.728 66.667 0.00 0.00 0.00 3.08
1970 6237 2.509336 CGCCGCCAACCTAGACAG 60.509 66.667 0.00 0.00 0.00 3.51
2112 6406 1.154205 GGCTGACACGATGGGATTCG 61.154 60.000 0.00 0.00 44.56 3.34
2118 6412 1.200483 CACGATGGGATTCGAACGAG 58.800 55.000 0.00 0.00 41.62 4.18
2151 6445 3.244422 TGAAATACGGAAACAGCCAGAGT 60.244 43.478 0.00 0.00 0.00 3.24
2167 6461 1.926511 GAGTTTCGTCCGCGGGAGTA 61.927 60.000 27.83 10.70 38.89 2.59
2186 6480 2.486472 AGCCTCAAAGTGATGGACAG 57.514 50.000 0.00 0.00 0.00 3.51
2207 6501 1.734655 ATCCAGATATGGGCGTTCCT 58.265 50.000 6.52 0.00 36.20 3.36
2250 6555 2.885644 CACAAGATCGACGGCGGG 60.886 66.667 12.58 2.23 38.28 6.13
2418 6759 1.082117 GGCCGTGAATACAGTCACCG 61.082 60.000 4.39 0.00 44.23 4.94
2464 6805 8.420374 TTTTATGAAGTACTATTCGGCTGAAG 57.580 34.615 14.43 3.25 37.57 3.02
2487 6828 6.841601 AGCCAATCCTAATGCTTATTACTCA 58.158 36.000 0.00 0.00 0.00 3.41
2496 6841 4.794278 TGCTTATTACTCACTCCGTTCA 57.206 40.909 0.00 0.00 0.00 3.18
2505 6850 5.470047 ACTCACTCCGTTCAGAAATAACT 57.530 39.130 0.00 0.00 0.00 2.24
2525 9917 5.416271 ACTGAATCGTGGTTATAGTTGGT 57.584 39.130 0.00 0.00 0.00 3.67
2543 9935 7.833285 AGTTGGTAACCATGTCAGTTATTTT 57.167 32.000 0.00 0.00 32.62 1.82
2547 9939 6.711194 TGGTAACCATGTCAGTTATTTTCGAA 59.289 34.615 0.00 0.00 32.62 3.71
2548 9940 7.392113 TGGTAACCATGTCAGTTATTTTCGAAT 59.608 33.333 0.00 0.00 32.62 3.34
2552 9944 6.094048 ACCATGTCAGTTATTTTCGAATGGAG 59.906 38.462 11.76 0.00 36.40 3.86
2553 9945 6.458751 CCATGTCAGTTATTTTCGAATGGAGG 60.459 42.308 0.00 0.00 35.16 4.30
2554 9946 5.556915 TGTCAGTTATTTTCGAATGGAGGT 58.443 37.500 0.00 0.00 0.00 3.85
2555 9947 6.703319 TGTCAGTTATTTTCGAATGGAGGTA 58.297 36.000 0.00 0.00 0.00 3.08
2557 9949 7.827236 TGTCAGTTATTTTCGAATGGAGGTAAT 59.173 33.333 0.00 0.00 0.00 1.89
2558 9950 9.321562 GTCAGTTATTTTCGAATGGAGGTAATA 57.678 33.333 0.00 0.00 0.00 0.98
2585 9977 4.436242 TTTTGAACACGGTACAAAAGCA 57.564 36.364 12.50 0.00 38.17 3.91
2586 9978 4.436242 TTTGAACACGGTACAAAAGCAA 57.564 36.364 0.00 0.00 31.94 3.91
2587 9979 3.684103 TGAACACGGTACAAAAGCAAG 57.316 42.857 0.00 0.00 0.00 4.01
2588 9980 2.356382 TGAACACGGTACAAAAGCAAGG 59.644 45.455 0.00 0.00 0.00 3.61
2589 9981 1.314730 ACACGGTACAAAAGCAAGGG 58.685 50.000 0.00 0.00 0.00 3.95
2590 9982 0.596082 CACGGTACAAAAGCAAGGGG 59.404 55.000 0.00 0.00 0.00 4.79
2591 9983 0.184211 ACGGTACAAAAGCAAGGGGT 59.816 50.000 0.00 0.00 0.00 4.95
2592 9984 0.879090 CGGTACAAAAGCAAGGGGTC 59.121 55.000 0.00 0.00 0.00 4.46
2593 9985 1.816183 CGGTACAAAAGCAAGGGGTCA 60.816 52.381 0.00 0.00 0.00 4.02
2594 9986 2.525368 GGTACAAAAGCAAGGGGTCAT 58.475 47.619 0.00 0.00 0.00 3.06
2595 9987 3.692690 GGTACAAAAGCAAGGGGTCATA 58.307 45.455 0.00 0.00 0.00 2.15
2596 9988 4.278310 GGTACAAAAGCAAGGGGTCATAT 58.722 43.478 0.00 0.00 0.00 1.78
2597 9989 5.442391 GGTACAAAAGCAAGGGGTCATATA 58.558 41.667 0.00 0.00 0.00 0.86
2598 9990 5.298527 GGTACAAAAGCAAGGGGTCATATAC 59.701 44.000 0.00 0.00 0.00 1.47
2599 9991 4.929479 ACAAAAGCAAGGGGTCATATACA 58.071 39.130 0.00 0.00 0.00 2.29
2600 9992 4.705023 ACAAAAGCAAGGGGTCATATACAC 59.295 41.667 0.00 0.00 0.00 2.90
2601 9993 4.584638 AAAGCAAGGGGTCATATACACA 57.415 40.909 0.00 0.00 30.67 3.72
2602 9994 3.560636 AGCAAGGGGTCATATACACAC 57.439 47.619 0.00 0.00 30.67 3.82
2603 9995 2.158957 AGCAAGGGGTCATATACACACG 60.159 50.000 0.00 0.00 30.67 4.49
2604 9996 2.210116 CAAGGGGTCATATACACACGC 58.790 52.381 0.00 0.00 30.67 5.34
2605 9997 1.491668 AGGGGTCATATACACACGCA 58.508 50.000 0.00 0.00 30.67 5.24
2606 9998 2.047061 AGGGGTCATATACACACGCAT 58.953 47.619 0.00 0.00 30.67 4.73
2607 9999 3.236047 AGGGGTCATATACACACGCATA 58.764 45.455 0.00 0.00 30.67 3.14
2608 10000 3.006537 AGGGGTCATATACACACGCATAC 59.993 47.826 0.00 0.00 30.67 2.39
2609 10001 3.243941 GGGGTCATATACACACGCATACA 60.244 47.826 0.00 0.00 30.67 2.29
2610 10002 3.739300 GGGTCATATACACACGCATACAC 59.261 47.826 0.00 0.00 0.00 2.90
2611 10003 4.500887 GGGTCATATACACACGCATACACT 60.501 45.833 0.00 0.00 0.00 3.55
2612 10004 4.680110 GGTCATATACACACGCATACACTC 59.320 45.833 0.00 0.00 0.00 3.51
2613 10005 5.278604 GTCATATACACACGCATACACTCA 58.721 41.667 0.00 0.00 0.00 3.41
2614 10006 5.173312 GTCATATACACACGCATACACTCAC 59.827 44.000 0.00 0.00 0.00 3.51
2615 10007 2.357327 TACACACGCATACACTCACC 57.643 50.000 0.00 0.00 0.00 4.02
2616 10008 0.320421 ACACACGCATACACTCACCC 60.320 55.000 0.00 0.00 0.00 4.61
2617 10009 1.019278 CACACGCATACACTCACCCC 61.019 60.000 0.00 0.00 0.00 4.95
2618 10010 1.192146 ACACGCATACACTCACCCCT 61.192 55.000 0.00 0.00 0.00 4.79
2619 10011 0.821517 CACGCATACACTCACCCCTA 59.178 55.000 0.00 0.00 0.00 3.53
2620 10012 1.412710 CACGCATACACTCACCCCTAT 59.587 52.381 0.00 0.00 0.00 2.57
2621 10013 1.412710 ACGCATACACTCACCCCTATG 59.587 52.381 0.00 0.00 0.00 2.23
2622 10014 1.686587 CGCATACACTCACCCCTATGA 59.313 52.381 0.00 0.00 0.00 2.15
2623 10015 2.102420 CGCATACACTCACCCCTATGAA 59.898 50.000 0.00 0.00 0.00 2.57
2624 10016 3.467803 GCATACACTCACCCCTATGAAC 58.532 50.000 0.00 0.00 0.00 3.18
2625 10017 3.717707 CATACACTCACCCCTATGAACG 58.282 50.000 0.00 0.00 0.00 3.95
2626 10018 0.249398 ACACTCACCCCTATGAACGC 59.751 55.000 0.00 0.00 0.00 4.84
2627 10019 0.249120 CACTCACCCCTATGAACGCA 59.751 55.000 0.00 0.00 0.00 5.24
2628 10020 0.249398 ACTCACCCCTATGAACGCAC 59.751 55.000 0.00 0.00 0.00 5.34
2629 10021 0.249120 CTCACCCCTATGAACGCACA 59.751 55.000 0.00 0.00 0.00 4.57
2630 10022 0.036765 TCACCCCTATGAACGCACAC 60.037 55.000 0.00 0.00 0.00 3.82
2631 10023 0.321210 CACCCCTATGAACGCACACA 60.321 55.000 0.00 0.00 0.00 3.72
2632 10024 0.618458 ACCCCTATGAACGCACACAT 59.382 50.000 0.00 0.00 0.00 3.21
2633 10025 1.834896 ACCCCTATGAACGCACACATA 59.165 47.619 0.00 0.00 0.00 2.29
2634 10026 2.438021 ACCCCTATGAACGCACACATAT 59.562 45.455 0.00 0.00 0.00 1.78
2635 10027 2.807967 CCCCTATGAACGCACACATATG 59.192 50.000 0.00 0.00 0.00 1.78
2636 10028 2.807967 CCCTATGAACGCACACATATGG 59.192 50.000 7.80 0.00 32.02 2.74
2637 10029 3.466836 CCTATGAACGCACACATATGGT 58.533 45.455 7.80 0.00 0.00 3.55
2638 10030 4.502431 CCCTATGAACGCACACATATGGTA 60.502 45.833 7.80 0.00 33.37 3.25
2639 10031 4.686091 CCTATGAACGCACACATATGGTAG 59.314 45.833 7.80 0.00 0.00 3.18
2640 10032 2.276201 TGAACGCACACATATGGTAGC 58.724 47.619 7.80 6.57 0.00 3.58
2641 10033 1.597663 GAACGCACACATATGGTAGCC 59.402 52.381 7.80 0.00 0.00 3.93
2642 10034 0.539518 ACGCACACATATGGTAGCCA 59.460 50.000 7.80 0.00 38.19 4.75
2643 10035 1.140852 ACGCACACATATGGTAGCCAT 59.859 47.619 7.80 5.92 46.99 4.40
2644 10036 1.532437 CGCACACATATGGTAGCCATG 59.468 52.381 7.80 4.99 44.84 3.66
2645 10037 1.881973 GCACACATATGGTAGCCATGG 59.118 52.381 7.63 7.63 44.84 3.66
2646 10038 2.507484 CACACATATGGTAGCCATGGG 58.493 52.381 15.13 4.74 44.84 4.00
2657 10049 2.281761 CCATGGGCTGGCGATACC 60.282 66.667 2.85 0.00 38.47 2.73
2659 10051 1.893808 CATGGGCTGGCGATACCAC 60.894 63.158 0.00 0.00 46.36 4.16
2660 10052 3.460672 ATGGGCTGGCGATACCACG 62.461 63.158 0.00 0.00 46.36 4.94
2661 10053 4.910585 GGGCTGGCGATACCACGG 62.911 72.222 0.00 0.00 46.36 4.94
2662 10054 4.157120 GGCTGGCGATACCACGGT 62.157 66.667 0.00 0.00 46.36 4.83
2663 10055 2.890474 GCTGGCGATACCACGGTG 60.890 66.667 0.00 0.00 46.36 4.94
2664 10056 2.890474 CTGGCGATACCACGGTGC 60.890 66.667 1.68 0.00 46.36 5.01
2665 10057 4.460683 TGGCGATACCACGGTGCC 62.461 66.667 8.72 8.72 46.36 5.01
2668 10060 4.508128 CGATACCACGGTGCCGCT 62.508 66.667 10.87 0.00 44.19 5.52
2669 10061 2.809706 GATACCACGGTGCCGCTA 59.190 61.111 10.87 0.00 44.19 4.26
2670 10062 1.142314 GATACCACGGTGCCGCTAA 59.858 57.895 10.87 0.00 44.19 3.09
2671 10063 1.149964 GATACCACGGTGCCGCTAAC 61.150 60.000 10.87 0.00 44.19 2.34
2672 10064 2.582734 ATACCACGGTGCCGCTAACC 62.583 60.000 10.87 0.00 44.19 2.85
2673 10065 4.690719 CCACGGTGCCGCTAACCA 62.691 66.667 10.87 0.00 44.19 3.67
2674 10066 2.435938 CACGGTGCCGCTAACCAT 60.436 61.111 10.87 0.00 44.19 3.55
2675 10067 2.125269 ACGGTGCCGCTAACCATC 60.125 61.111 10.87 0.00 44.19 3.51
2676 10068 2.895372 CGGTGCCGCTAACCATCC 60.895 66.667 0.00 0.00 37.57 3.51
2677 10069 2.270850 GGTGCCGCTAACCATCCA 59.729 61.111 0.00 0.00 37.65 3.41
2678 10070 1.377987 GGTGCCGCTAACCATCCAA 60.378 57.895 0.00 0.00 37.65 3.53
2679 10071 0.751643 GGTGCCGCTAACCATCCAAT 60.752 55.000 0.00 0.00 37.65 3.16
2680 10072 0.663153 GTGCCGCTAACCATCCAATC 59.337 55.000 0.00 0.00 0.00 2.67
2681 10073 0.254462 TGCCGCTAACCATCCAATCA 59.746 50.000 0.00 0.00 0.00 2.57
2682 10074 0.663153 GCCGCTAACCATCCAATCAC 59.337 55.000 0.00 0.00 0.00 3.06
2683 10075 2.016604 GCCGCTAACCATCCAATCACA 61.017 52.381 0.00 0.00 0.00 3.58
2684 10076 2.364632 CCGCTAACCATCCAATCACAA 58.635 47.619 0.00 0.00 0.00 3.33
2685 10077 2.355756 CCGCTAACCATCCAATCACAAG 59.644 50.000 0.00 0.00 0.00 3.16
2686 10078 3.009723 CGCTAACCATCCAATCACAAGT 58.990 45.455 0.00 0.00 0.00 3.16
2687 10079 3.440173 CGCTAACCATCCAATCACAAGTT 59.560 43.478 0.00 0.00 0.00 2.66
2688 10080 4.672542 CGCTAACCATCCAATCACAAGTTG 60.673 45.833 0.00 0.00 0.00 3.16
2689 10081 4.458989 GCTAACCATCCAATCACAAGTTGA 59.541 41.667 10.54 0.00 39.11 3.18
2720 10112 7.105241 AGGTAATATTTCTTTAGGACGTCGT 57.895 36.000 15.89 15.89 0.00 4.34
2755 10147 8.727910 GGAGTAGTAACAGAAAATACAAAAGGG 58.272 37.037 0.00 0.00 0.00 3.95
2765 10157 3.979501 ATACAAAAGGGGAGCATGGAT 57.020 42.857 0.00 0.00 0.00 3.41
2775 10167 3.265479 GGGGAGCATGGATAGAAAGCTAT 59.735 47.826 0.00 0.00 40.00 2.97
2848 10240 0.968393 AGCGTGTCCCTTCCTCTCTC 60.968 60.000 0.00 0.00 0.00 3.20
2855 10247 1.316706 CCCTTCCTCTCTCGCGACTT 61.317 60.000 3.71 0.00 0.00 3.01
2857 10249 0.805614 CTTCCTCTCTCGCGACTTGA 59.194 55.000 3.71 0.00 0.00 3.02
2880 10272 2.429930 CAGTTTGCGTCCCCTCCA 59.570 61.111 0.00 0.00 0.00 3.86
2887 10279 0.912487 TGCGTCCCCTCCAAACCTAT 60.912 55.000 0.00 0.00 0.00 2.57
2922 10340 9.620660 AATCAAAACATGTTATCTCGGTAAAAC 57.379 29.630 12.39 0.00 0.00 2.43
2930 10348 3.515330 ATCTCGGTAAAACCAGGTACG 57.485 47.619 0.00 0.00 38.47 3.67
2961 10379 2.359848 GGAAACCACCAAACTACACACC 59.640 50.000 0.00 0.00 0.00 4.16
2994 10412 0.108520 GTCGAGGTACCAAATGGCGA 60.109 55.000 15.94 9.90 39.32 5.54
2997 10415 1.653151 GAGGTACCAAATGGCGACTC 58.347 55.000 15.94 1.12 39.32 3.36
2998 10416 1.207329 GAGGTACCAAATGGCGACTCT 59.793 52.381 15.94 0.00 39.32 3.24
3029 10447 0.671251 GCGTCCCCATTGTGACAAAA 59.329 50.000 0.62 0.00 0.00 2.44
3041 10459 1.238625 TGACAAAACCGAATCCCCGC 61.239 55.000 0.00 0.00 0.00 6.13
3079 10497 2.424246 CTCTTCCGTGGTAGAGGACTTC 59.576 54.545 13.17 0.00 36.44 3.01
3083 10501 0.888619 CGTGGTAGAGGACTTCAGCA 59.111 55.000 0.00 0.00 0.00 4.41
3092 10510 0.536006 GGACTTCAGCAGCAACCACT 60.536 55.000 0.00 0.00 0.00 4.00
3094 10512 1.678101 GACTTCAGCAGCAACCACTTT 59.322 47.619 0.00 0.00 0.00 2.66
3095 10513 1.406539 ACTTCAGCAGCAACCACTTTG 59.593 47.619 0.00 0.00 38.37 2.77
3096 10514 0.746063 TTCAGCAGCAACCACTTTGG 59.254 50.000 0.00 0.00 45.02 3.28
3098 10516 2.029518 GCAGCAACCACTTTGGCC 59.970 61.111 0.00 0.00 42.67 5.36
3099 10517 2.795110 GCAGCAACCACTTTGGCCA 61.795 57.895 0.00 0.00 42.67 5.36
3102 10520 1.617850 CAGCAACCACTTTGGCCATAA 59.382 47.619 6.09 2.96 42.67 1.90
3162 10580 2.682893 GGGCAGATTGCTCACGTAG 58.317 57.895 0.67 0.00 45.01 3.51
3180 10598 5.809562 CACGTAGAGCTTGAATGAAGAAGAT 59.190 40.000 0.00 0.00 32.82 2.40
3184 10602 5.355596 AGAGCTTGAATGAAGAAGATACCG 58.644 41.667 0.00 0.00 32.82 4.02
3204 10622 4.778415 CGACAGGGCGACGGTCTG 62.778 72.222 6.57 0.97 34.32 3.51
3243 10661 0.463654 TAATAGCAGCCGCCCTGTTG 60.464 55.000 0.00 0.00 43.71 3.33
3267 10685 1.602888 CATAGGCCTGCCATCCAGC 60.603 63.158 17.99 0.00 40.36 4.85
3371 10789 9.973450 ATTTATCAGATATACTCACACTGTGAC 57.027 33.333 15.86 0.00 37.67 3.67
3376 10794 5.594725 AGATATACTCACACTGTGACGGAAT 59.405 40.000 15.86 5.07 37.67 3.01
3377 10795 6.771267 AGATATACTCACACTGTGACGGAATA 59.229 38.462 15.86 7.02 37.67 1.75
3378 10796 5.854010 ATACTCACACTGTGACGGAATAT 57.146 39.130 15.86 6.01 37.67 1.28
3379 10797 4.111375 ACTCACACTGTGACGGAATATC 57.889 45.455 15.86 0.00 37.67 1.63
3380 10798 3.764434 ACTCACACTGTGACGGAATATCT 59.236 43.478 15.86 0.00 37.67 1.98
3381 10799 4.220821 ACTCACACTGTGACGGAATATCTT 59.779 41.667 15.86 0.00 37.67 2.40
3382 10800 4.744570 TCACACTGTGACGGAATATCTTC 58.255 43.478 15.86 0.00 37.67 2.87
3383 10801 4.219725 TCACACTGTGACGGAATATCTTCA 59.780 41.667 15.86 0.00 37.67 3.02
3384 10802 4.327357 CACACTGTGACGGAATATCTTCAC 59.673 45.833 15.86 0.00 39.09 3.18
3385 10803 3.547868 CACTGTGACGGAATATCTTCACG 59.452 47.826 0.32 0.00 41.11 4.35
3386 10804 3.116300 CTGTGACGGAATATCTTCACGG 58.884 50.000 0.00 0.00 41.11 4.94
3387 10805 1.859080 GTGACGGAATATCTTCACGGC 59.141 52.381 0.00 0.00 35.15 5.68
3388 10806 1.202486 TGACGGAATATCTTCACGGCC 60.202 52.381 0.00 0.00 34.25 6.13
3389 10807 1.068741 GACGGAATATCTTCACGGCCT 59.931 52.381 0.00 0.00 31.07 5.19
3390 10808 1.485066 ACGGAATATCTTCACGGCCTT 59.515 47.619 0.00 0.00 32.66 4.35
3391 10809 2.135933 CGGAATATCTTCACGGCCTTC 58.864 52.381 0.00 0.00 32.70 3.46
3392 10810 2.483013 CGGAATATCTTCACGGCCTTCA 60.483 50.000 0.00 0.00 32.70 3.02
3393 10811 2.872858 GGAATATCTTCACGGCCTTCAC 59.127 50.000 0.00 0.00 32.70 3.18
3394 10812 3.531538 GAATATCTTCACGGCCTTCACA 58.468 45.455 0.00 0.00 0.00 3.58
3395 10813 2.672961 TATCTTCACGGCCTTCACAG 57.327 50.000 0.00 0.00 0.00 3.66
3396 10814 0.674895 ATCTTCACGGCCTTCACAGC 60.675 55.000 0.00 0.00 0.00 4.40
3403 10821 3.072476 GCCTTCACAGCCTCCTGA 58.928 61.111 0.00 0.00 41.77 3.86
3404 10822 1.376466 GCCTTCACAGCCTCCTGAA 59.624 57.895 0.00 0.00 41.77 3.02
3405 10823 0.957888 GCCTTCACAGCCTCCTGAAC 60.958 60.000 0.00 0.00 41.77 3.18
3406 10824 0.397941 CCTTCACAGCCTCCTGAACA 59.602 55.000 0.00 0.00 41.77 3.18
3407 10825 1.517242 CTTCACAGCCTCCTGAACAC 58.483 55.000 0.00 0.00 41.77 3.32
3408 10826 1.071385 CTTCACAGCCTCCTGAACACT 59.929 52.381 0.00 0.00 41.77 3.55
3409 10827 2.009681 TCACAGCCTCCTGAACACTA 57.990 50.000 0.00 0.00 41.77 2.74
3410 10828 1.618837 TCACAGCCTCCTGAACACTAC 59.381 52.381 0.00 0.00 41.77 2.73
3411 10829 1.620819 CACAGCCTCCTGAACACTACT 59.379 52.381 0.00 0.00 41.77 2.57
3412 10830 1.896465 ACAGCCTCCTGAACACTACTC 59.104 52.381 0.00 0.00 41.77 2.59
3413 10831 1.895798 CAGCCTCCTGAACACTACTCA 59.104 52.381 0.00 0.00 41.77 3.41
3414 10832 2.499289 CAGCCTCCTGAACACTACTCAT 59.501 50.000 0.00 0.00 41.77 2.90
3415 10833 2.499289 AGCCTCCTGAACACTACTCATG 59.501 50.000 0.00 0.00 0.00 3.07
3416 10834 2.419297 GCCTCCTGAACACTACTCATGG 60.419 54.545 0.00 0.00 0.00 3.66
3417 10835 2.834549 CCTCCTGAACACTACTCATGGT 59.165 50.000 0.00 0.00 0.00 3.55
3418 10836 3.368843 CCTCCTGAACACTACTCATGGTG 60.369 52.174 0.00 0.00 42.78 4.17
3419 10837 3.506398 TCCTGAACACTACTCATGGTGA 58.494 45.455 6.80 0.00 39.61 4.02
3420 10838 3.258372 TCCTGAACACTACTCATGGTGAC 59.742 47.826 6.80 2.29 39.61 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.548510 GACATTCCAGGGCCTAGCTT 59.451 55.000 5.28 0.00 0.00 3.74
1 2 0.621571 TGACATTCCAGGGCCTAGCT 60.622 55.000 5.28 0.00 0.00 3.32
2 3 0.179034 CTGACATTCCAGGGCCTAGC 60.179 60.000 5.28 0.00 0.00 3.42
3 4 1.207791 ACTGACATTCCAGGGCCTAG 58.792 55.000 5.28 0.00 38.44 3.02
4 5 2.561209 TACTGACATTCCAGGGCCTA 57.439 50.000 5.28 0.00 38.44 3.93
5 6 1.668826 TTACTGACATTCCAGGGCCT 58.331 50.000 0.00 0.00 38.44 5.19
6 7 2.736670 ATTACTGACATTCCAGGGCC 57.263 50.000 0.00 0.00 38.44 5.80
7 8 5.133221 ACAATATTACTGACATTCCAGGGC 58.867 41.667 0.00 0.00 38.44 5.19
8 9 6.595682 AGACAATATTACTGACATTCCAGGG 58.404 40.000 0.00 0.00 38.44 4.45
9 10 8.511604 AAAGACAATATTACTGACATTCCAGG 57.488 34.615 0.00 0.00 38.44 4.45
42 43 9.339492 GTCAAAGAAAAATGCAACATTGAAAAA 57.661 25.926 0.00 0.00 0.00 1.94
43 44 8.509690 TGTCAAAGAAAAATGCAACATTGAAAA 58.490 25.926 0.00 0.00 0.00 2.29
44 45 8.037382 TGTCAAAGAAAAATGCAACATTGAAA 57.963 26.923 0.00 0.00 0.00 2.69
45 46 7.606858 TGTCAAAGAAAAATGCAACATTGAA 57.393 28.000 0.00 0.00 0.00 2.69
46 47 7.631822 CATGTCAAAGAAAAATGCAACATTGA 58.368 30.769 0.00 0.00 0.00 2.57
47 48 6.358558 GCATGTCAAAGAAAAATGCAACATTG 59.641 34.615 0.00 0.00 42.48 2.82
48 49 6.261381 AGCATGTCAAAGAAAAATGCAACATT 59.739 30.769 8.47 0.00 44.76 2.71
49 50 5.761234 AGCATGTCAAAGAAAAATGCAACAT 59.239 32.000 8.47 0.00 44.76 2.71
50 51 5.117584 AGCATGTCAAAGAAAAATGCAACA 58.882 33.333 8.47 0.00 44.76 3.33
51 52 5.662211 AGCATGTCAAAGAAAAATGCAAC 57.338 34.783 8.47 0.00 44.76 4.17
52 53 6.760298 TGTTAGCATGTCAAAGAAAAATGCAA 59.240 30.769 8.47 0.00 44.76 4.08
53 54 6.279123 TGTTAGCATGTCAAAGAAAAATGCA 58.721 32.000 8.47 0.00 44.76 3.96
54 55 6.617105 GCTGTTAGCATGTCAAAGAAAAATGC 60.617 38.462 0.00 0.00 41.89 3.56
55 56 6.128742 GGCTGTTAGCATGTCAAAGAAAAATG 60.129 38.462 2.99 0.00 44.75 2.32
56 57 5.928264 GGCTGTTAGCATGTCAAAGAAAAAT 59.072 36.000 2.99 0.00 44.75 1.82
57 58 5.068987 AGGCTGTTAGCATGTCAAAGAAAAA 59.931 36.000 2.99 0.00 44.75 1.94
58 59 4.584325 AGGCTGTTAGCATGTCAAAGAAAA 59.416 37.500 2.99 0.00 44.75 2.29
59 60 4.022935 CAGGCTGTTAGCATGTCAAAGAAA 60.023 41.667 6.28 0.00 46.75 2.52
60 61 3.503363 CAGGCTGTTAGCATGTCAAAGAA 59.497 43.478 6.28 0.00 46.75 2.52
61 62 3.076621 CAGGCTGTTAGCATGTCAAAGA 58.923 45.455 6.28 0.00 46.75 2.52
62 63 3.482722 CAGGCTGTTAGCATGTCAAAG 57.517 47.619 6.28 0.00 46.75 2.77
69 70 5.982890 AAATAAACACAGGCTGTTAGCAT 57.017 34.783 19.43 6.58 44.75 3.79
70 71 5.782893 AAAATAAACACAGGCTGTTAGCA 57.217 34.783 19.43 4.24 44.75 3.49
71 72 7.201435 GCATAAAAATAAACACAGGCTGTTAGC 60.201 37.037 19.43 6.64 42.70 3.09
72 73 7.812191 TGCATAAAAATAAACACAGGCTGTTAG 59.188 33.333 19.43 10.61 42.70 2.34
73 74 7.596995 GTGCATAAAAATAAACACAGGCTGTTA 59.403 33.333 19.43 8.81 42.70 2.41
74 75 6.423604 GTGCATAAAAATAAACACAGGCTGTT 59.576 34.615 19.43 6.47 45.68 3.16
75 76 5.925969 GTGCATAAAAATAAACACAGGCTGT 59.074 36.000 15.88 15.88 32.89 4.40
76 77 5.925397 TGTGCATAAAAATAAACACAGGCTG 59.075 36.000 14.16 14.16 33.41 4.85
77 78 5.925969 GTGTGCATAAAAATAAACACAGGCT 59.074 36.000 0.00 0.00 38.58 4.58
78 79 5.694006 TGTGTGCATAAAAATAAACACAGGC 59.306 36.000 2.51 0.00 42.01 4.85
79 80 6.699204 TGTGTGTGCATAAAAATAAACACAGG 59.301 34.615 6.68 0.00 45.99 4.00
80 81 7.221645 TGTGTGTGTGCATAAAAATAAACACAG 59.778 33.333 6.68 0.00 45.99 3.66
81 82 7.035612 TGTGTGTGTGCATAAAAATAAACACA 58.964 30.769 2.51 2.51 43.96 3.72
82 83 7.456684 TGTGTGTGTGCATAAAAATAAACAC 57.543 32.000 0.00 0.00 38.66 3.32
83 84 7.307042 GCATGTGTGTGTGCATAAAAATAAACA 60.307 33.333 0.00 0.00 40.94 2.83
84 85 7.008859 GCATGTGTGTGTGCATAAAAATAAAC 58.991 34.615 0.00 0.00 40.94 2.01
85 86 6.128982 CGCATGTGTGTGTGCATAAAAATAAA 60.129 34.615 0.00 0.00 41.32 1.40
86 87 5.344396 CGCATGTGTGTGTGCATAAAAATAA 59.656 36.000 0.00 0.00 41.32 1.40
87 88 4.855937 CGCATGTGTGTGTGCATAAAAATA 59.144 37.500 0.00 0.00 41.32 1.40
88 89 3.674281 CGCATGTGTGTGTGCATAAAAAT 59.326 39.130 0.00 0.00 41.32 1.82
89 90 3.048501 CGCATGTGTGTGTGCATAAAAA 58.951 40.909 0.00 0.00 41.32 1.94
90 91 2.606551 CCGCATGTGTGTGTGCATAAAA 60.607 45.455 5.38 0.00 41.32 1.52
91 92 1.068679 CCGCATGTGTGTGTGCATAAA 60.069 47.619 5.38 0.00 41.32 1.40
92 93 0.520847 CCGCATGTGTGTGTGCATAA 59.479 50.000 5.38 0.00 41.32 1.90
93 94 1.921045 GCCGCATGTGTGTGTGCATA 61.921 55.000 5.38 0.00 41.32 3.14
94 95 2.956194 CCGCATGTGTGTGTGCAT 59.044 55.556 5.38 0.00 41.32 3.96
95 96 3.963647 GCCGCATGTGTGTGTGCA 61.964 61.111 5.38 0.00 41.32 4.57
96 97 3.271706 ATGCCGCATGTGTGTGTGC 62.272 57.895 4.68 1.48 37.97 4.57
97 98 1.443025 CATGCCGCATGTGTGTGTG 60.443 57.895 22.92 0.00 37.12 3.82
98 99 2.956194 CATGCCGCATGTGTGTGT 59.044 55.556 22.92 0.00 37.12 3.72
105 106 1.135939 CACAGTCACATGCCGCATG 59.864 57.895 28.09 28.09 46.18 4.06
106 107 1.003476 TCACAGTCACATGCCGCAT 60.003 52.632 0.00 0.00 0.00 4.73
107 108 1.960763 GTCACAGTCACATGCCGCA 60.961 57.895 0.00 0.00 0.00 5.69
108 109 1.230635 AAGTCACAGTCACATGCCGC 61.231 55.000 0.00 0.00 0.00 6.53
109 110 1.069703 CAAAGTCACAGTCACATGCCG 60.070 52.381 0.00 0.00 0.00 5.69
110 111 1.267806 CCAAAGTCACAGTCACATGCC 59.732 52.381 0.00 0.00 0.00 4.40
111 112 1.267806 CCCAAAGTCACAGTCACATGC 59.732 52.381 0.00 0.00 0.00 4.06
112 113 1.267806 GCCCAAAGTCACAGTCACATG 59.732 52.381 0.00 0.00 0.00 3.21
113 114 1.143684 AGCCCAAAGTCACAGTCACAT 59.856 47.619 0.00 0.00 0.00 3.21
114 115 0.546122 AGCCCAAAGTCACAGTCACA 59.454 50.000 0.00 0.00 0.00 3.58
115 116 1.604278 GAAGCCCAAAGTCACAGTCAC 59.396 52.381 0.00 0.00 0.00 3.67
116 117 1.211703 TGAAGCCCAAAGTCACAGTCA 59.788 47.619 0.00 0.00 0.00 3.41
117 118 1.967319 TGAAGCCCAAAGTCACAGTC 58.033 50.000 0.00 0.00 0.00 3.51
118 119 2.664402 ATGAAGCCCAAAGTCACAGT 57.336 45.000 0.00 0.00 0.00 3.55
119 120 4.278170 TGTAAATGAAGCCCAAAGTCACAG 59.722 41.667 0.00 0.00 0.00 3.66
120 121 4.211125 TGTAAATGAAGCCCAAAGTCACA 58.789 39.130 0.00 0.00 0.00 3.58
121 122 4.846779 TGTAAATGAAGCCCAAAGTCAC 57.153 40.909 0.00 0.00 0.00 3.67
122 123 5.221422 CCTTTGTAAATGAAGCCCAAAGTCA 60.221 40.000 0.00 0.00 40.04 3.41
123 124 5.010617 TCCTTTGTAAATGAAGCCCAAAGTC 59.989 40.000 0.00 0.00 40.04 3.01
124 125 4.898861 TCCTTTGTAAATGAAGCCCAAAGT 59.101 37.500 0.00 0.00 40.04 2.66
125 126 5.467035 TCCTTTGTAAATGAAGCCCAAAG 57.533 39.130 0.00 0.00 40.87 2.77
126 127 5.279910 CCATCCTTTGTAAATGAAGCCCAAA 60.280 40.000 0.00 0.00 0.00 3.28
127 128 4.222588 CCATCCTTTGTAAATGAAGCCCAA 59.777 41.667 0.00 0.00 0.00 4.12
128 129 3.768757 CCATCCTTTGTAAATGAAGCCCA 59.231 43.478 0.00 0.00 0.00 5.36
129 130 3.132824 CCCATCCTTTGTAAATGAAGCCC 59.867 47.826 0.00 0.00 0.00 5.19
130 131 3.769300 ACCCATCCTTTGTAAATGAAGCC 59.231 43.478 0.00 0.00 0.00 4.35
131 132 5.047377 TGAACCCATCCTTTGTAAATGAAGC 60.047 40.000 0.00 0.00 0.00 3.86
132 133 6.588719 TGAACCCATCCTTTGTAAATGAAG 57.411 37.500 0.00 0.00 0.00 3.02
133 134 6.574073 GCATGAACCCATCCTTTGTAAATGAA 60.574 38.462 0.00 0.00 0.00 2.57
134 135 5.105392 GCATGAACCCATCCTTTGTAAATGA 60.105 40.000 0.00 0.00 0.00 2.57
135 136 5.105228 AGCATGAACCCATCCTTTGTAAATG 60.105 40.000 0.00 0.00 0.00 2.32
136 137 5.025453 AGCATGAACCCATCCTTTGTAAAT 58.975 37.500 0.00 0.00 0.00 1.40
137 138 4.415596 AGCATGAACCCATCCTTTGTAAA 58.584 39.130 0.00 0.00 0.00 2.01
138 139 4.046286 AGCATGAACCCATCCTTTGTAA 57.954 40.909 0.00 0.00 0.00 2.41
139 140 3.737559 AGCATGAACCCATCCTTTGTA 57.262 42.857 0.00 0.00 0.00 2.41
140 141 2.610438 AGCATGAACCCATCCTTTGT 57.390 45.000 0.00 0.00 0.00 2.83
141 142 3.355378 TGTAGCATGAACCCATCCTTTG 58.645 45.455 0.00 0.00 0.00 2.77
142 143 3.737559 TGTAGCATGAACCCATCCTTT 57.262 42.857 0.00 0.00 0.00 3.11
143 144 3.737559 TTGTAGCATGAACCCATCCTT 57.262 42.857 0.00 0.00 0.00 3.36
144 145 3.010584 ACTTTGTAGCATGAACCCATCCT 59.989 43.478 0.00 0.00 0.00 3.24
145 146 3.356290 ACTTTGTAGCATGAACCCATCC 58.644 45.455 0.00 0.00 0.00 3.51
146 147 4.218417 ACAACTTTGTAGCATGAACCCATC 59.782 41.667 0.00 0.00 40.16 3.51
147 148 4.151883 ACAACTTTGTAGCATGAACCCAT 58.848 39.130 0.00 0.00 40.16 4.00
148 149 3.561143 ACAACTTTGTAGCATGAACCCA 58.439 40.909 0.00 0.00 40.16 4.51
149 150 4.584327 AACAACTTTGTAGCATGAACCC 57.416 40.909 0.00 0.00 41.31 4.11
150 151 7.968405 CCTATAAACAACTTTGTAGCATGAACC 59.032 37.037 0.00 0.00 41.31 3.62
151 152 8.512138 ACCTATAAACAACTTTGTAGCATGAAC 58.488 33.333 0.00 0.00 41.31 3.18
152 153 8.630054 ACCTATAAACAACTTTGTAGCATGAA 57.370 30.769 0.00 0.00 41.31 2.57
153 154 8.630054 AACCTATAAACAACTTTGTAGCATGA 57.370 30.769 0.00 0.00 41.31 3.07
157 158 9.616634 GGTTAAACCTATAAACAACTTTGTAGC 57.383 33.333 0.00 0.00 36.35 3.58
160 161 9.411189 TCTGGTTAAACCTATAAACAACTTTGT 57.589 29.630 0.00 0.00 40.43 2.83
161 162 9.893305 CTCTGGTTAAACCTATAAACAACTTTG 57.107 33.333 0.00 0.00 39.58 2.77
162 163 9.636789 ACTCTGGTTAAACCTATAAACAACTTT 57.363 29.630 0.00 0.00 39.58 2.66
163 164 9.636789 AACTCTGGTTAAACCTATAAACAACTT 57.363 29.630 0.00 0.00 39.58 2.66
164 165 9.636789 AAACTCTGGTTAAACCTATAAACAACT 57.363 29.630 0.00 0.00 39.58 3.16
165 166 9.673454 CAAACTCTGGTTAAACCTATAAACAAC 57.327 33.333 0.00 0.00 39.58 3.32
166 167 9.629878 TCAAACTCTGGTTAAACCTATAAACAA 57.370 29.630 0.00 0.00 39.58 2.83
167 168 9.629878 TTCAAACTCTGGTTAAACCTATAAACA 57.370 29.630 0.00 0.00 39.58 2.83
168 169 9.888878 GTTCAAACTCTGGTTAAACCTATAAAC 57.111 33.333 0.00 0.00 39.58 2.01
180 181 6.959639 ATATGTGTTGTTCAAACTCTGGTT 57.040 33.333 0.00 0.00 37.24 3.67
209 212 4.142902 GCTACAACGTTGCATTATCAGTGT 60.143 41.667 27.61 7.26 34.70 3.55
249 252 8.820933 CGACGCATCATTTCCTGATAATAATAT 58.179 33.333 0.00 0.00 42.91 1.28
259 262 2.204237 TGATCGACGCATCATTTCCTG 58.796 47.619 0.00 0.00 0.00 3.86
272 275 6.611381 TGAACAAGATTGGAAATTGATCGAC 58.389 36.000 0.00 0.00 30.78 4.20
273 276 6.816134 TGAACAAGATTGGAAATTGATCGA 57.184 33.333 0.00 0.00 30.78 3.59
345 349 4.565962 TCACAGTTACGTCAACGCTTAAAA 59.434 37.500 1.81 0.00 44.43 1.52
350 354 2.058798 CATCACAGTTACGTCAACGCT 58.941 47.619 1.81 0.00 44.43 5.07
353 357 3.428870 CCAGTCATCACAGTTACGTCAAC 59.571 47.826 0.00 0.00 37.41 3.18
357 361 1.343142 TGCCAGTCATCACAGTTACGT 59.657 47.619 0.00 0.00 0.00 3.57
358 362 1.726791 GTGCCAGTCATCACAGTTACG 59.273 52.381 0.00 0.00 33.63 3.18
373 377 1.350684 TCAAATGGAGTGCTAGTGCCA 59.649 47.619 0.00 0.00 38.71 4.92
375 379 4.818546 ACATATCAAATGGAGTGCTAGTGC 59.181 41.667 0.00 0.00 40.20 4.40
378 382 5.354054 GCACATATCAAATGGAGTGCTAG 57.646 43.478 7.98 0.00 46.31 3.42
384 388 5.327616 TGGTTTGCACATATCAAATGGAG 57.672 39.130 0.00 0.00 36.06 3.86
386 390 7.040494 TGTATTGGTTTGCACATATCAAATGG 58.960 34.615 0.00 0.00 36.06 3.16
387 391 8.651391 ATGTATTGGTTTGCACATATCAAATG 57.349 30.769 0.00 0.00 36.06 2.32
389 393 9.579768 GTTATGTATTGGTTTGCACATATCAAA 57.420 29.630 0.00 0.00 34.70 2.69
390 394 8.965819 AGTTATGTATTGGTTTGCACATATCAA 58.034 29.630 0.00 0.00 34.70 2.57
391 395 8.404765 CAGTTATGTATTGGTTTGCACATATCA 58.595 33.333 0.00 0.00 34.70 2.15
392 396 8.405531 ACAGTTATGTATTGGTTTGCACATATC 58.594 33.333 0.00 0.00 38.09 1.63
393 397 8.292444 ACAGTTATGTATTGGTTTGCACATAT 57.708 30.769 0.00 0.00 38.09 1.78
394 398 7.695480 ACAGTTATGTATTGGTTTGCACATA 57.305 32.000 0.00 0.00 38.09 2.29
395 399 6.588719 ACAGTTATGTATTGGTTTGCACAT 57.411 33.333 0.00 0.00 38.09 3.21
396 400 6.398234 AACAGTTATGTATTGGTTTGCACA 57.602 33.333 0.00 0.00 39.29 4.57
397 401 6.364976 GGAAACAGTTATGTATTGGTTTGCAC 59.635 38.462 0.00 0.00 39.29 4.57
398 402 6.266558 AGGAAACAGTTATGTATTGGTTTGCA 59.733 34.615 0.00 0.00 39.29 4.08
399 403 6.687604 AGGAAACAGTTATGTATTGGTTTGC 58.312 36.000 0.00 0.00 39.29 3.68
400 404 9.010029 AGTAGGAAACAGTTATGTATTGGTTTG 57.990 33.333 0.00 0.00 39.29 2.93
401 405 9.582648 AAGTAGGAAACAGTTATGTATTGGTTT 57.417 29.630 0.00 0.00 39.29 3.27
413 417 9.676861 ACTACAAAAGTTAAGTAGGAAACAGTT 57.323 29.630 15.23 0.00 39.54 3.16
448 452 8.408601 GCTCCTAATAGCTTGATTGATGAAAAA 58.591 33.333 0.00 0.00 39.50 1.94
473 481 2.812591 CCATGAGGATGCAATGACTAGC 59.187 50.000 0.00 0.00 36.89 3.42
507 752 9.991906 TCGGAGGAATATATTCTTCGTTATTTT 57.008 29.630 23.67 2.64 42.00 1.82
510 755 8.350852 AGTCGGAGGAATATATTCTTCGTTAT 57.649 34.615 23.67 12.19 42.00 1.89
511 756 7.756395 AGTCGGAGGAATATATTCTTCGTTA 57.244 36.000 23.67 13.19 42.00 3.18
512 757 6.651975 AGTCGGAGGAATATATTCTTCGTT 57.348 37.500 23.67 11.39 42.00 3.85
513 758 7.166851 TCTAGTCGGAGGAATATATTCTTCGT 58.833 38.462 23.67 14.35 42.00 3.85
514 759 7.612668 TCTAGTCGGAGGAATATATTCTTCG 57.387 40.000 23.67 21.38 42.00 3.79
518 763 9.589111 GGAAATTCTAGTCGGAGGAATATATTC 57.411 37.037 15.88 15.88 36.08 1.75
531 778 9.967346 TTCTAGTATCAATGGAAATTCTAGTCG 57.033 33.333 0.00 0.00 0.00 4.18
563 810 5.012458 AGTTTAGCGGGGTAAAGTAGACTTT 59.988 40.000 12.09 12.09 46.78 2.66
658 905 3.752747 TGCGAGCATTCTGAAATTTGAGA 59.247 39.130 2.95 2.95 0.00 3.27
659 906 4.087510 TGCGAGCATTCTGAAATTTGAG 57.912 40.909 0.00 0.00 0.00 3.02
660 907 4.707030 ATGCGAGCATTCTGAAATTTGA 57.293 36.364 4.52 0.00 31.82 2.69
661 908 9.999009 ATATATATGCGAGCATTCTGAAATTTG 57.001 29.630 16.15 0.00 37.82 2.32
729 4750 1.602377 GTACTGCCTGTTTCAAGCGTT 59.398 47.619 0.00 0.00 0.00 4.84
730 4751 1.226746 GTACTGCCTGTTTCAAGCGT 58.773 50.000 0.00 0.00 0.00 5.07
731 4752 0.517316 GGTACTGCCTGTTTCAAGCG 59.483 55.000 0.00 0.00 0.00 4.68
734 4755 0.250553 CCGGGTACTGCCTGTTTCAA 60.251 55.000 0.00 0.00 42.20 2.69
740 4761 4.143333 CGACCCGGGTACTGCCTG 62.143 72.222 30.38 6.69 43.41 4.85
782 4854 4.785453 GCCAGCCCGTTCAGGAGG 62.785 72.222 0.00 0.00 45.00 4.30
783 4855 4.785453 GGCCAGCCCGTTCAGGAG 62.785 72.222 0.00 0.00 45.00 3.69
800 4872 0.478507 ACAAGGAAGTCCCCAACTGG 59.521 55.000 0.00 0.00 38.58 4.00
801 4873 1.609208 CACAAGGAAGTCCCCAACTG 58.391 55.000 0.00 0.00 38.58 3.16
802 4874 0.178990 GCACAAGGAAGTCCCCAACT 60.179 55.000 0.00 0.00 41.10 3.16
803 4875 0.467290 TGCACAAGGAAGTCCCCAAC 60.467 55.000 0.00 0.00 36.42 3.77
804 4876 0.482446 ATGCACAAGGAAGTCCCCAA 59.518 50.000 0.00 0.00 36.42 4.12
805 4877 0.482446 AATGCACAAGGAAGTCCCCA 59.518 50.000 0.00 0.00 36.42 4.96
806 4878 0.890683 CAATGCACAAGGAAGTCCCC 59.109 55.000 0.00 0.00 36.42 4.81
807 4879 0.890683 CCAATGCACAAGGAAGTCCC 59.109 55.000 0.00 0.00 36.42 4.46
808 4880 0.890683 CCCAATGCACAAGGAAGTCC 59.109 55.000 0.00 0.00 0.00 3.85
809 4881 0.244721 GCCCAATGCACAAGGAAGTC 59.755 55.000 0.00 0.00 40.77 3.01
810 4882 1.187567 GGCCCAATGCACAAGGAAGT 61.188 55.000 0.00 0.00 43.89 3.01
811 4883 1.593265 GGCCCAATGCACAAGGAAG 59.407 57.895 0.00 0.00 43.89 3.46
812 4884 2.274645 CGGCCCAATGCACAAGGAA 61.275 57.895 0.00 0.00 43.89 3.36
813 4885 2.676121 CGGCCCAATGCACAAGGA 60.676 61.111 0.00 0.00 43.89 3.36
814 4886 4.440127 GCGGCCCAATGCACAAGG 62.440 66.667 0.00 0.00 43.89 3.61
815 4887 4.440127 GGCGGCCCAATGCACAAG 62.440 66.667 8.12 0.00 43.89 3.16
816 4888 4.992740 AGGCGGCCCAATGCACAA 62.993 61.111 17.02 0.00 43.89 3.33
820 4892 4.802051 TCAGAGGCGGCCCAATGC 62.802 66.667 17.02 0.00 40.16 3.56
821 4893 2.045045 TTCAGAGGCGGCCCAATG 60.045 61.111 17.02 12.24 0.00 2.82
822 4894 2.273449 CTTCAGAGGCGGCCCAAT 59.727 61.111 17.02 0.00 0.00 3.16
823 4895 4.033776 CCTTCAGAGGCGGCCCAA 62.034 66.667 17.02 2.74 35.94 4.12
825 4897 4.475135 GTCCTTCAGAGGCGGCCC 62.475 72.222 17.02 7.43 43.21 5.80
826 4898 3.036429 ATGTCCTTCAGAGGCGGCC 62.036 63.158 12.11 12.11 43.21 6.13
827 4899 1.817099 CATGTCCTTCAGAGGCGGC 60.817 63.158 0.00 0.00 43.21 6.53
828 4900 0.742281 CACATGTCCTTCAGAGGCGG 60.742 60.000 0.00 0.00 43.21 6.13
829 4901 0.742281 CCACATGTCCTTCAGAGGCG 60.742 60.000 0.00 0.00 43.21 5.52
877 4949 7.917505 TCCGTCGTAGAGTAATAAAATTTCTCC 59.082 37.037 0.00 0.00 36.95 3.71
889 4961 5.235186 GCAGTAGTAATCCGTCGTAGAGTAA 59.765 44.000 0.00 0.00 36.95 2.24
935 5008 2.050351 CAAGTGTCCGTCTCGCGT 60.050 61.111 5.77 0.00 39.32 6.01
997 5070 7.935210 TCCTCGTGGCGTGAGAATATATATATA 59.065 37.037 5.66 4.92 35.43 0.86
998 5071 6.771267 TCCTCGTGGCGTGAGAATATATATAT 59.229 38.462 7.31 0.00 35.43 0.86
1006 5088 0.537188 ATTCCTCGTGGCGTGAGAAT 59.463 50.000 7.31 3.52 35.43 2.40
1029 5111 2.223829 CGTCGAATGTAGATTCAGGGCT 60.224 50.000 12.61 0.00 38.35 5.19
1396 5522 4.287781 TGGCAGCGTCGTTTCCGA 62.288 61.111 0.00 0.00 41.73 4.55
1431 5608 1.070134 TCTTGGTAAACACGAGCTGCT 59.930 47.619 0.00 0.00 0.00 4.24
1438 5615 2.724839 GCGATGCTTCTTGGTAAACACG 60.725 50.000 0.00 0.00 0.00 4.49
1467 5689 1.338107 TGTTGTCTCCGTGGATCACT 58.662 50.000 0.00 0.00 31.34 3.41
1479 5701 2.550208 GGATTCCGTGACCTTGTTGTCT 60.550 50.000 0.00 0.00 36.21 3.41
1483 5705 1.978580 AGAGGATTCCGTGACCTTGTT 59.021 47.619 0.00 0.00 33.89 2.83
1488 5710 2.068834 TCCTAGAGGATTCCGTGACC 57.931 55.000 0.00 0.00 39.78 4.02
1549 5771 4.404098 GTCGATGGGTTGGCCGGT 62.404 66.667 1.90 0.00 34.97 5.28
1554 5776 4.752879 ACGGCGTCGATGGGTTGG 62.753 66.667 20.03 0.00 40.11 3.77
1605 5833 2.093973 CCTTGACAGGTGCGAGACTATT 60.094 50.000 0.00 0.00 35.06 1.73
1640 5868 3.972403 TCGTTCGTTGTGATCTCTTTGA 58.028 40.909 0.00 0.00 0.00 2.69
1744 5978 4.101448 GTGAGGGATGTGCGGGCT 62.101 66.667 0.00 0.00 0.00 5.19
1787 6048 4.155733 CCGTGCGTATCCAGGCCA 62.156 66.667 5.01 0.00 34.60 5.36
1821 6088 3.358076 GAAGTAGAGCGCGTGGCCT 62.358 63.158 8.43 0.00 45.17 5.19
1965 6232 2.286523 CCGGGGCTTGAGACTGTCT 61.287 63.158 10.66 10.66 0.00 3.41
1970 6237 2.245438 CTTCTCCCGGGGCTTGAGAC 62.245 65.000 23.50 0.00 35.01 3.36
2088 6382 3.250323 CATCGTGTCAGCCGAGCG 61.250 66.667 0.00 0.00 37.81 5.03
2112 6406 0.039798 TCAGCACCGTGTACTCGTTC 60.040 55.000 15.43 4.95 0.00 3.95
2118 6412 1.657094 CCGTATTTCAGCACCGTGTAC 59.343 52.381 0.00 0.00 0.00 2.90
2151 6445 2.879907 CTACTCCCGCGGACGAAA 59.120 61.111 30.73 6.87 43.93 3.46
2167 6461 1.980765 TCTGTCCATCACTTTGAGGCT 59.019 47.619 0.00 0.00 0.00 4.58
2186 6480 2.039084 AGGAACGCCCATATCTGGATTC 59.961 50.000 0.00 0.30 46.37 2.52
2207 6501 1.155859 AAATGCAGGCCAGGGTTCA 59.844 52.632 5.01 0.00 0.00 3.18
2349 6685 5.235186 GCCTAGCTACACATACACTGAAATG 59.765 44.000 0.00 0.00 0.00 2.32
2464 6805 6.712547 AGTGAGTAATAAGCATTAGGATTGGC 59.287 38.462 0.00 0.00 31.76 4.52
2469 6810 5.597182 ACGGAGTGAGTAATAAGCATTAGGA 59.403 40.000 0.00 0.00 42.51 2.94
2496 6841 9.886132 AACTATAACCACGATTCAGTTATTTCT 57.114 29.630 8.28 0.00 37.71 2.52
2517 9909 9.528489 AAAATAACTGACATGGTTACCAACTAT 57.472 29.630 8.63 0.00 36.95 2.12
2525 9917 7.608376 TCCATTCGAAAATAACTGACATGGTTA 59.392 33.333 0.00 0.00 34.32 2.85
2531 9923 5.556915 ACCTCCATTCGAAAATAACTGACA 58.443 37.500 0.00 0.00 0.00 3.58
2565 9957 4.416620 CTTGCTTTTGTACCGTGTTCAAA 58.583 39.130 5.26 5.26 32.62 2.69
2568 9960 2.287368 CCCTTGCTTTTGTACCGTGTTC 60.287 50.000 0.00 0.00 0.00 3.18
2569 9961 1.679153 CCCTTGCTTTTGTACCGTGTT 59.321 47.619 0.00 0.00 0.00 3.32
2570 9962 1.314730 CCCTTGCTTTTGTACCGTGT 58.685 50.000 0.00 0.00 0.00 4.49
2571 9963 0.596082 CCCCTTGCTTTTGTACCGTG 59.404 55.000 0.00 0.00 0.00 4.94
2573 9965 0.879090 GACCCCTTGCTTTTGTACCG 59.121 55.000 0.00 0.00 0.00 4.02
2574 9966 1.989706 TGACCCCTTGCTTTTGTACC 58.010 50.000 0.00 0.00 0.00 3.34
2576 9968 5.883673 GTGTATATGACCCCTTGCTTTTGTA 59.116 40.000 0.00 0.00 0.00 2.41
2577 9969 4.705023 GTGTATATGACCCCTTGCTTTTGT 59.295 41.667 0.00 0.00 0.00 2.83
2578 9970 4.704540 TGTGTATATGACCCCTTGCTTTTG 59.295 41.667 0.00 0.00 0.00 2.44
2579 9971 4.705023 GTGTGTATATGACCCCTTGCTTTT 59.295 41.667 0.00 0.00 0.00 2.27
2580 9972 4.270008 GTGTGTATATGACCCCTTGCTTT 58.730 43.478 0.00 0.00 0.00 3.51
2581 9973 3.681594 CGTGTGTATATGACCCCTTGCTT 60.682 47.826 0.00 0.00 0.00 3.91
2582 9974 2.158957 CGTGTGTATATGACCCCTTGCT 60.159 50.000 0.00 0.00 0.00 3.91
2583 9975 2.210116 CGTGTGTATATGACCCCTTGC 58.790 52.381 0.00 0.00 0.00 4.01
2584 9976 2.210116 GCGTGTGTATATGACCCCTTG 58.790 52.381 0.00 0.00 0.00 3.61
2585 9977 1.834896 TGCGTGTGTATATGACCCCTT 59.165 47.619 0.00 0.00 0.00 3.95
2586 9978 1.491668 TGCGTGTGTATATGACCCCT 58.508 50.000 0.00 0.00 0.00 4.79
2587 9979 2.543777 ATGCGTGTGTATATGACCCC 57.456 50.000 0.00 0.00 0.00 4.95
2588 9980 3.739300 GTGTATGCGTGTGTATATGACCC 59.261 47.826 0.00 0.00 0.00 4.46
2589 9981 4.617959 AGTGTATGCGTGTGTATATGACC 58.382 43.478 0.00 0.00 0.00 4.02
2590 9982 5.173312 GTGAGTGTATGCGTGTGTATATGAC 59.827 44.000 0.00 0.00 0.00 3.06
2591 9983 5.278604 GTGAGTGTATGCGTGTGTATATGA 58.721 41.667 0.00 0.00 0.00 2.15
2592 9984 4.444388 GGTGAGTGTATGCGTGTGTATATG 59.556 45.833 0.00 0.00 0.00 1.78
2593 9985 4.500887 GGGTGAGTGTATGCGTGTGTATAT 60.501 45.833 0.00 0.00 0.00 0.86
2594 9986 3.181484 GGGTGAGTGTATGCGTGTGTATA 60.181 47.826 0.00 0.00 0.00 1.47
2595 9987 2.418197 GGGTGAGTGTATGCGTGTGTAT 60.418 50.000 0.00 0.00 0.00 2.29
2596 9988 1.067425 GGGTGAGTGTATGCGTGTGTA 60.067 52.381 0.00 0.00 0.00 2.90
2597 9989 0.320421 GGGTGAGTGTATGCGTGTGT 60.320 55.000 0.00 0.00 0.00 3.72
2598 9990 1.019278 GGGGTGAGTGTATGCGTGTG 61.019 60.000 0.00 0.00 0.00 3.82
2599 9991 1.192146 AGGGGTGAGTGTATGCGTGT 61.192 55.000 0.00 0.00 0.00 4.49
2600 9992 0.821517 TAGGGGTGAGTGTATGCGTG 59.178 55.000 0.00 0.00 0.00 5.34
2601 9993 1.412710 CATAGGGGTGAGTGTATGCGT 59.587 52.381 0.00 0.00 0.00 5.24
2602 9994 1.686587 TCATAGGGGTGAGTGTATGCG 59.313 52.381 0.00 0.00 0.00 4.73
2603 9995 3.467803 GTTCATAGGGGTGAGTGTATGC 58.532 50.000 0.00 0.00 0.00 3.14
2604 9996 3.717707 CGTTCATAGGGGTGAGTGTATG 58.282 50.000 0.00 0.00 0.00 2.39
2605 9997 2.102588 GCGTTCATAGGGGTGAGTGTAT 59.897 50.000 0.00 0.00 0.00 2.29
2606 9998 1.479323 GCGTTCATAGGGGTGAGTGTA 59.521 52.381 0.00 0.00 0.00 2.90
2607 9999 0.249398 GCGTTCATAGGGGTGAGTGT 59.751 55.000 0.00 0.00 0.00 3.55
2608 10000 0.249120 TGCGTTCATAGGGGTGAGTG 59.751 55.000 0.00 0.00 0.00 3.51
2609 10001 0.249398 GTGCGTTCATAGGGGTGAGT 59.751 55.000 0.00 0.00 0.00 3.41
2610 10002 0.249120 TGTGCGTTCATAGGGGTGAG 59.751 55.000 0.00 0.00 0.00 3.51
2611 10003 0.036765 GTGTGCGTTCATAGGGGTGA 60.037 55.000 0.00 0.00 0.00 4.02
2612 10004 0.321210 TGTGTGCGTTCATAGGGGTG 60.321 55.000 0.00 0.00 0.00 4.61
2613 10005 0.618458 ATGTGTGCGTTCATAGGGGT 59.382 50.000 0.00 0.00 0.00 4.95
2614 10006 2.613026 TATGTGTGCGTTCATAGGGG 57.387 50.000 0.00 0.00 0.00 4.79
2615 10007 2.807967 CCATATGTGTGCGTTCATAGGG 59.192 50.000 1.24 9.74 40.38 3.53
2616 10008 3.466836 ACCATATGTGTGCGTTCATAGG 58.533 45.455 1.24 0.00 31.46 2.57
2617 10009 4.150627 GCTACCATATGTGTGCGTTCATAG 59.849 45.833 1.24 0.00 31.46 2.23
2618 10010 4.055360 GCTACCATATGTGTGCGTTCATA 58.945 43.478 1.24 0.00 0.00 2.15
2619 10011 2.872245 GCTACCATATGTGTGCGTTCAT 59.128 45.455 1.24 0.00 0.00 2.57
2620 10012 2.276201 GCTACCATATGTGTGCGTTCA 58.724 47.619 1.24 0.00 0.00 3.18
2621 10013 1.597663 GGCTACCATATGTGTGCGTTC 59.402 52.381 1.24 0.00 0.00 3.95
2622 10014 1.065782 TGGCTACCATATGTGTGCGTT 60.066 47.619 1.24 0.00 0.00 4.84
2623 10015 0.539518 TGGCTACCATATGTGTGCGT 59.460 50.000 1.24 0.00 0.00 5.24
2624 10016 1.532437 CATGGCTACCATATGTGTGCG 59.468 52.381 1.24 0.00 43.15 5.34
2625 10017 1.881973 CCATGGCTACCATATGTGTGC 59.118 52.381 0.00 2.55 43.15 4.57
2626 10018 2.507484 CCCATGGCTACCATATGTGTG 58.493 52.381 6.09 0.00 43.15 3.82
2627 10019 1.202927 GCCCATGGCTACCATATGTGT 60.203 52.381 6.09 2.24 43.15 3.72
2628 10020 1.538047 GCCCATGGCTACCATATGTG 58.462 55.000 6.09 0.00 43.15 3.21
2641 10033 2.510411 TGGTATCGCCAGCCCATG 59.490 61.111 0.00 0.00 43.61 3.66
2648 10040 4.460683 GGCACCGTGGTATCGCCA 62.461 66.667 12.60 0.00 46.95 5.69
2651 10043 2.616786 TTAGCGGCACCGTGGTATCG 62.617 60.000 11.27 8.29 42.09 2.92
2652 10044 1.142314 TTAGCGGCACCGTGGTATC 59.858 57.895 11.27 0.00 42.09 2.24
2653 10045 1.153509 GTTAGCGGCACCGTGGTAT 60.154 57.895 11.27 0.00 42.09 2.73
2654 10046 2.262292 GTTAGCGGCACCGTGGTA 59.738 61.111 11.27 0.00 42.09 3.25
2655 10047 4.692475 GGTTAGCGGCACCGTGGT 62.692 66.667 11.27 0.00 42.09 4.16
2656 10048 3.969250 ATGGTTAGCGGCACCGTGG 62.969 63.158 11.27 0.00 42.09 4.94
2657 10049 2.435938 ATGGTTAGCGGCACCGTG 60.436 61.111 11.27 0.00 42.09 4.94
2658 10050 2.125269 GATGGTTAGCGGCACCGT 60.125 61.111 11.27 2.96 42.09 4.83
2659 10051 2.895372 GGATGGTTAGCGGCACCG 60.895 66.667 4.30 4.30 37.07 4.94
2660 10052 0.751643 ATTGGATGGTTAGCGGCACC 60.752 55.000 1.45 2.16 34.52 5.01
2661 10053 0.663153 GATTGGATGGTTAGCGGCAC 59.337 55.000 1.45 0.00 0.00 5.01
2662 10054 0.254462 TGATTGGATGGTTAGCGGCA 59.746 50.000 1.45 0.00 0.00 5.69
2663 10055 0.663153 GTGATTGGATGGTTAGCGGC 59.337 55.000 0.00 0.00 0.00 6.53
2664 10056 2.036958 TGTGATTGGATGGTTAGCGG 57.963 50.000 0.00 0.00 0.00 5.52
2665 10057 3.009723 ACTTGTGATTGGATGGTTAGCG 58.990 45.455 0.00 0.00 0.00 4.26
2666 10058 4.458989 TCAACTTGTGATTGGATGGTTAGC 59.541 41.667 0.00 0.00 0.00 3.09
2667 10059 6.764308 ATCAACTTGTGATTGGATGGTTAG 57.236 37.500 0.00 0.00 45.13 2.34
2679 10071 1.270094 ACCTCGCGAATCAACTTGTGA 60.270 47.619 11.33 0.00 41.67 3.58
2680 10072 1.148310 ACCTCGCGAATCAACTTGTG 58.852 50.000 11.33 0.00 0.00 3.33
2681 10073 2.736144 TACCTCGCGAATCAACTTGT 57.264 45.000 11.33 0.15 0.00 3.16
2682 10074 5.907197 ATATTACCTCGCGAATCAACTTG 57.093 39.130 11.33 0.00 0.00 3.16
2683 10075 6.761714 AGAAATATTACCTCGCGAATCAACTT 59.238 34.615 11.33 0.00 0.00 2.66
2684 10076 6.281405 AGAAATATTACCTCGCGAATCAACT 58.719 36.000 11.33 0.00 0.00 3.16
2685 10077 6.526566 AGAAATATTACCTCGCGAATCAAC 57.473 37.500 11.33 0.00 0.00 3.18
2686 10078 7.548196 AAAGAAATATTACCTCGCGAATCAA 57.452 32.000 11.33 4.20 0.00 2.57
2687 10079 7.384115 CCTAAAGAAATATTACCTCGCGAATCA 59.616 37.037 11.33 0.00 0.00 2.57
2688 10080 7.597743 TCCTAAAGAAATATTACCTCGCGAATC 59.402 37.037 11.33 0.00 0.00 2.52
2689 10081 7.384387 GTCCTAAAGAAATATTACCTCGCGAAT 59.616 37.037 11.33 2.79 0.00 3.34
2690 10082 6.698766 GTCCTAAAGAAATATTACCTCGCGAA 59.301 38.462 11.33 0.00 0.00 4.70
2691 10083 6.211515 GTCCTAAAGAAATATTACCTCGCGA 58.788 40.000 9.26 9.26 0.00 5.87
2692 10084 5.116680 CGTCCTAAAGAAATATTACCTCGCG 59.883 44.000 0.00 0.00 0.00 5.87
2693 10085 5.981915 ACGTCCTAAAGAAATATTACCTCGC 59.018 40.000 0.00 0.00 0.00 5.03
2694 10086 6.359087 CGACGTCCTAAAGAAATATTACCTCG 59.641 42.308 10.58 0.00 0.00 4.63
2755 10147 4.081972 TCGATAGCTTTCTATCCATGCTCC 60.082 45.833 0.00 0.00 45.30 4.70
2765 10157 9.168451 CTGGTCTAGATTATCGATAGCTTTCTA 57.832 37.037 13.08 12.58 0.00 2.10
2775 10167 8.512956 GTTTATGCTACTGGTCTAGATTATCGA 58.487 37.037 0.00 0.00 0.00 3.59
2789 10181 3.498082 GTTTTGCCGGTTTATGCTACTG 58.502 45.455 1.90 0.00 0.00 2.74
2865 10257 1.658114 GTTTGGAGGGGACGCAAAC 59.342 57.895 0.00 0.00 0.00 2.93
2872 10264 4.853276 TGAGTTTTATAGGTTTGGAGGGGA 59.147 41.667 0.00 0.00 0.00 4.81
2922 10340 1.553248 TCCCTGACATTTCGTACCTGG 59.447 52.381 0.00 0.00 0.00 4.45
2930 10348 2.593026 TGGTGGTTTCCCTGACATTTC 58.407 47.619 0.00 0.00 0.00 2.17
3020 10438 1.611519 GGGGATTCGGTTTTGTCACA 58.388 50.000 0.00 0.00 0.00 3.58
3049 10467 0.967887 CCACGGAAGAGGAGCTCAGA 60.968 60.000 17.19 0.00 45.46 3.27
3079 10497 1.300388 GCCAAAGTGGTTGCTGCTG 60.300 57.895 0.00 0.00 40.46 4.41
3083 10501 1.618343 GTTATGGCCAAAGTGGTTGCT 59.382 47.619 10.96 0.00 40.46 3.91
3096 10514 3.098555 CTGTTCGGCGGTTATGGC 58.901 61.111 7.21 0.00 0.00 4.40
3098 10516 1.715585 CAGCTGTTCGGCGGTTATG 59.284 57.895 7.21 0.00 37.29 1.90
3099 10517 2.106683 GCAGCTGTTCGGCGGTTAT 61.107 57.895 16.64 0.00 37.29 1.89
3102 10520 4.626081 AAGCAGCTGTTCGGCGGT 62.626 61.111 16.64 0.00 40.93 5.68
3132 10550 0.625683 ATCTGCCCTGGGAAGTGGAT 60.626 55.000 20.60 4.32 0.00 3.41
3162 10580 5.352284 TCGGTATCTTCTTCATTCAAGCTC 58.648 41.667 0.00 0.00 31.26 4.09
3180 10598 2.124612 TCGCCCTGTCGATCGGTA 60.125 61.111 16.41 3.60 33.02 4.02
3184 10602 3.753070 GACCGTCGCCCTGTCGATC 62.753 68.421 0.00 0.00 40.84 3.69
3226 10644 2.124570 CAACAGGGCGGCTGCTAT 60.125 61.111 18.85 2.99 42.25 2.97
3243 10661 0.471617 ATGGCAGGCCTATGACAGTC 59.528 55.000 3.98 0.00 42.79 3.51
3267 10685 8.331022 CGTATTGACATTTAGAATTGACAGGAG 58.669 37.037 0.00 0.00 0.00 3.69
3313 10731 4.794248 TGTCATGCGTAATTCAGTATGC 57.206 40.909 6.37 0.00 36.67 3.14
3371 10789 2.135933 GAAGGCCGTGAAGATATTCCG 58.864 52.381 0.00 1.21 0.00 4.30
3376 10794 1.405526 GCTGTGAAGGCCGTGAAGATA 60.406 52.381 0.00 0.00 0.00 1.98
3377 10795 0.674895 GCTGTGAAGGCCGTGAAGAT 60.675 55.000 0.00 0.00 0.00 2.40
3378 10796 1.301716 GCTGTGAAGGCCGTGAAGA 60.302 57.895 0.00 0.00 0.00 2.87
3379 10797 2.328099 GGCTGTGAAGGCCGTGAAG 61.328 63.158 0.00 0.00 40.19 3.02
3380 10798 2.281484 GGCTGTGAAGGCCGTGAA 60.281 61.111 0.00 0.00 40.19 3.18
3386 10804 0.957888 GTTCAGGAGGCTGTGAAGGC 60.958 60.000 8.74 0.00 33.37 4.35
3387 10805 0.397941 TGTTCAGGAGGCTGTGAAGG 59.602 55.000 8.74 0.00 33.37 3.46
3388 10806 1.071385 AGTGTTCAGGAGGCTGTGAAG 59.929 52.381 8.74 0.00 33.37 3.02
3389 10807 1.131638 AGTGTTCAGGAGGCTGTGAA 58.868 50.000 0.00 0.00 0.00 3.18
3390 10808 1.618837 GTAGTGTTCAGGAGGCTGTGA 59.381 52.381 0.00 0.00 0.00 3.58
3391 10809 1.620819 AGTAGTGTTCAGGAGGCTGTG 59.379 52.381 0.00 0.00 0.00 3.66
3392 10810 1.896465 GAGTAGTGTTCAGGAGGCTGT 59.104 52.381 0.00 0.00 0.00 4.40
3393 10811 1.895798 TGAGTAGTGTTCAGGAGGCTG 59.104 52.381 0.00 0.00 0.00 4.85
3394 10812 2.310779 TGAGTAGTGTTCAGGAGGCT 57.689 50.000 0.00 0.00 0.00 4.58
3395 10813 2.419297 CCATGAGTAGTGTTCAGGAGGC 60.419 54.545 0.00 0.00 0.00 4.70
3396 10814 2.834549 ACCATGAGTAGTGTTCAGGAGG 59.165 50.000 0.00 0.00 0.00 4.30
3397 10815 3.511540 TCACCATGAGTAGTGTTCAGGAG 59.488 47.826 0.00 0.00 35.45 3.69
3398 10816 3.258372 GTCACCATGAGTAGTGTTCAGGA 59.742 47.826 0.00 0.00 35.45 3.86
3399 10817 3.006859 TGTCACCATGAGTAGTGTTCAGG 59.993 47.826 0.00 0.00 35.45 3.86
3400 10818 4.257267 TGTCACCATGAGTAGTGTTCAG 57.743 45.455 0.00 0.00 35.45 3.02
3401 10819 4.681074 TTGTCACCATGAGTAGTGTTCA 57.319 40.909 0.00 0.00 35.45 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.