Multiple sequence alignment - TraesCS1B01G432900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G432900 chr1B 100.000 4574 0 0 1 4574 657318397 657322970 0.000000e+00 8447.0
1 TraesCS1B01G432900 chr1B 78.226 248 42 9 429 664 548831707 548831954 1.030000e-31 148.0
2 TraesCS1B01G432900 chr1B 83.333 108 9 5 207 305 62713939 62713832 1.750000e-14 91.6
3 TraesCS1B01G432900 chr1A 92.566 1816 85 20 726 2528 566598020 566599798 0.000000e+00 2560.0
4 TraesCS1B01G432900 chr1A 90.487 1314 46 14 2906 4173 566602047 566603327 0.000000e+00 1661.0
5 TraesCS1B01G432900 chr1A 85.671 663 34 16 1879 2528 566601605 566600991 3.860000e-180 641.0
6 TraesCS1B01G432900 chr1A 80.482 456 69 13 1 438 566597320 566597773 9.490000e-87 331.0
7 TraesCS1B01G432900 chr1A 94.545 110 6 0 2539 2648 566601940 566602049 2.190000e-38 171.0
8 TraesCS1B01G432900 chr1A 98.246 57 1 0 4517 4573 519573741 519573685 2.910000e-17 100.0
9 TraesCS1B01G432900 chr1A 94.118 34 2 0 173 206 558938556 558938589 8.000000e-03 52.8
10 TraesCS1B01G432900 chr5D 94.889 1037 46 5 2958 3990 251935064 251936097 0.000000e+00 1615.0
11 TraesCS1B01G432900 chr5D 92.000 375 25 3 2157 2528 251934742 251934370 5.240000e-144 521.0
12 TraesCS1B01G432900 chr5D 87.805 369 20 5 826 1175 251956508 251956146 4.260000e-110 409.0
13 TraesCS1B01G432900 chr5D 85.539 408 35 9 1181 1588 251956068 251955685 5.510000e-109 405.0
14 TraesCS1B01G432900 chr5D 94.624 93 5 0 4420 4512 251936872 251936964 1.330000e-30 145.0
15 TraesCS1B01G432900 chr5D 83.871 93 14 1 383 474 537661524 537661616 2.270000e-13 87.9
16 TraesCS1B01G432900 chr5D 79.464 112 16 4 256 360 524510984 524511095 6.350000e-09 73.1
17 TraesCS1B01G432900 chr5B 93.285 1102 47 9 2906 3987 283987877 283988971 0.000000e+00 1600.0
18 TraesCS1B01G432900 chr5B 90.617 373 26 4 2157 2522 283987632 283987262 1.910000e-133 486.0
19 TraesCS1B01G432900 chr5B 87.634 372 15 9 823 1175 284002064 284001705 1.980000e-108 403.0
20 TraesCS1B01G432900 chr5B 87.708 301 26 4 1181 1481 284001627 284001338 1.580000e-89 340.0
21 TraesCS1B01G432900 chr5B 88.018 217 22 3 4277 4490 283989648 283989863 2.110000e-63 254.0
22 TraesCS1B01G432900 chr5B 86.592 179 9 4 3996 4159 283989081 283989259 2.810000e-42 183.0
23 TraesCS1B01G432900 chr5B 78.571 210 36 8 453 659 705061389 705061592 3.710000e-26 130.0
24 TraesCS1B01G432900 chr5B 88.636 88 8 2 8 94 409439299 409439385 6.260000e-19 106.0
25 TraesCS1B01G432900 chr5B 95.238 63 2 1 4511 4573 232555821 232555882 1.050000e-16 99.0
26 TraesCS1B01G432900 chr5A 93.417 957 46 6 2958 3911 334739659 334740601 0.000000e+00 1402.0
27 TraesCS1B01G432900 chr5A 86.107 691 58 23 1181 1869 334746059 334745405 0.000000e+00 710.0
28 TraesCS1B01G432900 chr5A 88.740 373 22 5 823 1175 334746509 334746137 5.430000e-119 438.0
29 TraesCS1B01G432900 chr5A 87.097 186 17 4 2157 2337 334739338 334739155 2.160000e-48 204.0
30 TraesCS1B01G432900 chr5A 91.803 122 7 1 2410 2528 334738872 334738751 2.830000e-37 167.0
31 TraesCS1B01G432900 chr5A 79.290 169 22 8 207 366 576089882 576089718 6.260000e-19 106.0
32 TraesCS1B01G432900 chr4B 85.902 532 58 8 1268 1799 218969733 218970247 6.690000e-153 551.0
33 TraesCS1B01G432900 chr4B 97.794 272 6 0 2635 2906 559129373 559129644 1.930000e-128 470.0
34 TraesCS1B01G432900 chr4B 98.855 262 3 0 2645 2906 228594308 228594569 6.930000e-128 468.0
35 TraesCS1B01G432900 chr4B 98.127 267 3 2 2645 2910 194621687 194621422 8.960000e-127 464.0
36 TraesCS1B01G432900 chr4B 78.761 113 16 4 256 360 554187483 554187595 8.210000e-08 69.4
37 TraesCS1B01G432900 chr3A 81.184 659 91 21 3126 3762 23377352 23376705 2.460000e-137 499.0
38 TraesCS1B01G432900 chr3A 78.464 729 117 22 3129 3828 23309652 23308935 1.510000e-119 440.0
39 TraesCS1B01G432900 chr3A 95.238 63 3 0 4511 4573 511872571 511872509 2.910000e-17 100.0
40 TraesCS1B01G432900 chr2B 98.182 275 4 1 2640 2913 517503457 517503731 3.200000e-131 479.0
41 TraesCS1B01G432900 chr2B 93.264 193 13 0 983 1175 346671185 346670993 7.490000e-73 285.0
42 TraesCS1B01G432900 chr2B 84.810 79 11 1 383 460 402519486 402519564 1.360000e-10 78.7
43 TraesCS1B01G432900 chr3D 82.790 552 73 13 3126 3657 13598851 13599400 1.490000e-129 473.0
44 TraesCS1B01G432900 chr3D 98.246 57 1 0 4517 4573 587265528 587265472 2.910000e-17 100.0
45 TraesCS1B01G432900 chr2A 98.148 270 4 1 2637 2906 584517413 584517145 1.930000e-128 470.0
46 TraesCS1B01G432900 chr2A 92.268 194 13 2 983 1175 240758789 240758981 1.620000e-69 274.0
47 TraesCS1B01G432900 chr2A 78.390 236 39 8 430 658 672423049 672422819 4.770000e-30 143.0
48 TraesCS1B01G432900 chr2A 81.295 139 22 4 1 138 423209231 423209366 4.840000e-20 110.0
49 TraesCS1B01G432900 chr2A 82.051 117 18 3 8 122 381486143 381486028 3.770000e-16 97.1
50 TraesCS1B01G432900 chr2A 81.203 133 11 9 170 289 377137218 377137349 1.350000e-15 95.3
51 TraesCS1B01G432900 chr2A 76.087 184 28 10 180 348 617056757 617056939 1.050000e-11 82.4
52 TraesCS1B01G432900 chr2A 83.529 85 11 2 207 289 171845049 171845132 4.910000e-10 76.8
53 TraesCS1B01G432900 chr2A 94.000 50 2 1 2535 2583 196497989 196498038 1.760000e-09 75.0
54 TraesCS1B01G432900 chr2A 89.130 46 5 0 2540 2585 705529174 705529129 1.780000e-04 58.4
55 TraesCS1B01G432900 chr7B 98.496 266 3 1 2645 2910 372681195 372681459 6.930000e-128 468.0
56 TraesCS1B01G432900 chr7B 78.776 245 38 10 435 666 526860751 526860994 7.930000e-33 152.0
57 TraesCS1B01G432900 chr7B 81.343 134 23 2 1 133 110686522 110686654 1.740000e-19 108.0
58 TraesCS1B01G432900 chr7B 95.161 62 2 1 4509 4570 69373085 69373145 3.770000e-16 97.1
59 TraesCS1B01G432900 chr6B 97.794 272 5 1 2640 2910 417246218 417246489 6.930000e-128 468.0
60 TraesCS1B01G432900 chr6B 74.176 364 62 18 1 336 590134700 590135059 6.210000e-24 122.0
61 TraesCS1B01G432900 chr6B 76.056 213 42 8 1 206 195969529 195969739 8.100000e-18 102.0
62 TraesCS1B01G432900 chr3B 97.770 269 6 0 2641 2909 19251352 19251084 8.960000e-127 464.0
63 TraesCS1B01G432900 chr3B 93.421 304 14 6 2603 2906 457535941 457536238 3.250000e-121 446.0
64 TraesCS1B01G432900 chr3B 79.653 634 98 20 3127 3740 19878049 19878671 1.180000e-115 427.0
65 TraesCS1B01G432900 chr3B 76.408 657 124 23 3126 3760 19933839 19934486 4.410000e-85 326.0
66 TraesCS1B01G432900 chr3B 76.139 373 76 5 3187 3546 19942347 19942719 2.810000e-42 183.0
67 TraesCS1B01G432900 chr3B 76.099 364 74 5 3187 3537 19959801 19960164 1.310000e-40 178.0
68 TraesCS1B01G432900 chr3B 83.889 180 23 4 400 579 121381493 121381320 2.830000e-37 167.0
69 TraesCS1B01G432900 chr3B 93.939 66 4 0 4509 4574 820327816 820327751 2.910000e-17 100.0
70 TraesCS1B01G432900 chr3B 78.710 155 23 9 8 156 82307987 82307837 1.350000e-15 95.3
71 TraesCS1B01G432900 chr2D 91.710 193 16 0 983 1175 222646612 222646804 7.540000e-68 268.0
72 TraesCS1B01G432900 chr2D 89.535 86 9 0 1 86 570130536 570130451 4.840000e-20 110.0
73 TraesCS1B01G432900 chr2D 74.390 328 49 18 180 474 378759946 378759621 1.740000e-19 108.0
74 TraesCS1B01G432900 chr2D 84.694 98 9 4 207 298 14438823 14438726 4.870000e-15 93.5
75 TraesCS1B01G432900 chr4D 83.333 168 22 6 430 593 359845988 359846153 2.850000e-32 150.0
76 TraesCS1B01G432900 chrUn 76.987 239 45 8 431 659 427342293 427342531 1.340000e-25 128.0
77 TraesCS1B01G432900 chrUn 76.987 239 45 8 431 659 476208793 476208555 1.340000e-25 128.0
78 TraesCS1B01G432900 chrUn 76.569 239 46 8 431 659 358062432 358062670 6.210000e-24 122.0
79 TraesCS1B01G432900 chr7A 90.476 84 8 0 1 84 132622556 132622473 1.350000e-20 111.0
80 TraesCS1B01G432900 chr7A 88.732 71 6 2 293 361 466197546 466197476 8.150000e-13 86.1
81 TraesCS1B01G432900 chr4A 100.000 55 0 0 4516 4570 654066604 654066658 8.100000e-18 102.0
82 TraesCS1B01G432900 chr4A 96.667 60 2 0 4514 4573 24512546 24512487 2.910000e-17 100.0
83 TraesCS1B01G432900 chr6A 98.246 57 1 0 4517 4573 97744915 97744859 2.910000e-17 100.0
84 TraesCS1B01G432900 chr6D 87.952 83 9 1 256 337 460277789 460277707 3.770000e-16 97.1
85 TraesCS1B01G432900 chr7D 87.209 86 8 2 207 290 183797439 183797523 1.350000e-15 95.3
86 TraesCS1B01G432900 chr7D 100.000 29 0 0 180 208 45813583 45813555 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G432900 chr1B 657318397 657322970 4573 False 8447.00 8447 100.000000 1 4574 1 chr1B.!!$F2 4573
1 TraesCS1B01G432900 chr1A 566597320 566603327 6007 False 1180.75 2560 89.520000 1 4173 4 chr1A.!!$F2 4172
2 TraesCS1B01G432900 chr1A 566600991 566601605 614 True 641.00 641 85.671000 1879 2528 1 chr1A.!!$R2 649
3 TraesCS1B01G432900 chr5D 251935064 251936964 1900 False 880.00 1615 94.756500 2958 4512 2 chr5D.!!$F3 1554
4 TraesCS1B01G432900 chr5D 251955685 251956508 823 True 407.00 409 86.672000 826 1588 2 chr5D.!!$R2 762
5 TraesCS1B01G432900 chr5B 283987877 283989863 1986 False 679.00 1600 89.298333 2906 4490 3 chr5B.!!$F4 1584
6 TraesCS1B01G432900 chr5B 284001338 284002064 726 True 371.50 403 87.671000 823 1481 2 chr5B.!!$R2 658
7 TraesCS1B01G432900 chr5A 334739659 334740601 942 False 1402.00 1402 93.417000 2958 3911 1 chr5A.!!$F1 953
8 TraesCS1B01G432900 chr5A 334745405 334746509 1104 True 574.00 710 87.423500 823 1869 2 chr5A.!!$R3 1046
9 TraesCS1B01G432900 chr4B 218969733 218970247 514 False 551.00 551 85.902000 1268 1799 1 chr4B.!!$F1 531
10 TraesCS1B01G432900 chr3A 23376705 23377352 647 True 499.00 499 81.184000 3126 3762 1 chr3A.!!$R2 636
11 TraesCS1B01G432900 chr3A 23308935 23309652 717 True 440.00 440 78.464000 3129 3828 1 chr3A.!!$R1 699
12 TraesCS1B01G432900 chr3D 13598851 13599400 549 False 473.00 473 82.790000 3126 3657 1 chr3D.!!$F1 531
13 TraesCS1B01G432900 chr3B 19878049 19878671 622 False 427.00 427 79.653000 3127 3740 1 chr3B.!!$F1 613
14 TraesCS1B01G432900 chr3B 19933839 19934486 647 False 326.00 326 76.408000 3126 3760 1 chr3B.!!$F2 634

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
798 903 0.033796 CTCAGGCCACCCATGTGATT 60.034 55.000 5.01 0.0 45.76 2.57 F
809 914 0.109179 CATGTGATTGGTGGGCGTTG 60.109 55.000 0.00 0.0 0.00 4.10 F
922 1056 0.178921 TGGTCAGGCCACTCTCTCTT 60.179 55.000 5.01 0.0 43.61 2.85 F
1902 2123 0.320771 GTCACCGCAGTGTCAGGAAT 60.321 55.000 0.00 0.0 44.83 3.01 F
2089 2310 1.082104 GCCGTCTTCGTTTTGCCTG 60.082 57.895 0.00 0.0 35.01 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1895 2116 0.625849 GCCCTTCCCTTCATTCCTGA 59.374 55.000 0.0 0.0 0.00 3.86 R
1900 2121 1.000866 GCCAGCCCTTCCCTTCATT 59.999 57.895 0.0 0.0 0.00 2.57 R
2888 5256 0.702902 AGTACTCCCTCCGTTCCTCA 59.297 55.000 0.0 0.0 0.00 3.86 R
3486 5892 0.391263 CTTCGTACTGAGCCCCCAAC 60.391 60.000 0.0 0.0 0.00 3.77 R
4002 6589 1.188219 GGCTCCGGCAGATAGATGGA 61.188 60.000 0.0 0.0 40.87 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 5.863397 TGCATCAAAATCTCGAACCATTTTC 59.137 36.000 6.47 0.00 31.22 2.29
36 37 4.793216 CGAACCATTTTCATCGTTGGATTC 59.207 41.667 0.00 0.00 33.36 2.52
43 44 1.883084 ATCGTTGGATTCCTCGCGC 60.883 57.895 0.00 0.00 0.00 6.86
58 59 0.652592 CGCGCCGAGATCTTTGAAAT 59.347 50.000 0.00 0.00 0.00 2.17
86 87 8.492782 AGATCTCAGGTTGATAGATTTTGATGT 58.507 33.333 0.00 0.00 30.19 3.06
148 151 0.486879 AGCATGTTTCCCCCTTTCCA 59.513 50.000 0.00 0.00 0.00 3.53
150 153 1.827245 GCATGTTTCCCCCTTTCCAGT 60.827 52.381 0.00 0.00 0.00 4.00
185 188 1.598601 GGCACGTCGAAACTAAAACCA 59.401 47.619 0.00 0.00 0.00 3.67
191 194 3.424433 CGTCGAAACTAAAACCATGCCTC 60.424 47.826 0.00 0.00 0.00 4.70
194 197 3.181520 CGAAACTAAAACCATGCCTCTCG 60.182 47.826 0.00 0.00 0.00 4.04
211 214 2.738846 TCTCGCAGAAGCAAAATCTCAC 59.261 45.455 0.00 0.00 42.27 3.51
213 216 1.464687 CGCAGAAGCAAAATCTCACGG 60.465 52.381 0.00 0.00 42.27 4.94
255 265 4.823790 TTTTTGGTTTTCGAGAGGTAGC 57.176 40.909 0.00 0.00 0.00 3.58
256 266 2.467566 TTGGTTTTCGAGAGGTAGCC 57.532 50.000 0.00 0.00 0.00 3.93
257 267 0.245539 TGGTTTTCGAGAGGTAGCCG 59.754 55.000 0.00 0.00 0.00 5.52
260 272 0.389426 TTTTCGAGAGGTAGCCGTGC 60.389 55.000 0.00 0.00 0.00 5.34
291 303 2.146342 AGCAAAACCATGTCTCTCACG 58.854 47.619 0.00 0.00 0.00 4.35
294 306 3.364366 GCAAAACCATGTCTCTCACGAAG 60.364 47.826 0.00 0.00 0.00 3.79
298 310 3.654414 ACCATGTCTCTCACGAAGAAAC 58.346 45.455 0.00 0.00 32.23 2.78
346 360 3.606886 GTGCCTCTCACGGAAGAAA 57.393 52.632 0.00 0.00 35.76 2.52
347 361 1.878953 GTGCCTCTCACGGAAGAAAA 58.121 50.000 0.00 0.00 35.76 2.29
348 362 2.218603 GTGCCTCTCACGGAAGAAAAA 58.781 47.619 0.00 0.00 35.76 1.94
349 363 2.814336 GTGCCTCTCACGGAAGAAAAAT 59.186 45.455 0.00 0.00 35.76 1.82
350 364 3.074412 TGCCTCTCACGGAAGAAAAATC 58.926 45.455 0.00 0.00 0.00 2.17
351 365 3.074412 GCCTCTCACGGAAGAAAAATCA 58.926 45.455 0.00 0.00 0.00 2.57
352 366 3.691609 GCCTCTCACGGAAGAAAAATCAT 59.308 43.478 0.00 0.00 0.00 2.45
353 367 4.437930 GCCTCTCACGGAAGAAAAATCATG 60.438 45.833 0.00 0.00 0.00 3.07
354 368 4.697352 CCTCTCACGGAAGAAAAATCATGT 59.303 41.667 0.00 0.00 0.00 3.21
355 369 5.163814 CCTCTCACGGAAGAAAAATCATGTC 60.164 44.000 0.00 0.00 0.00 3.06
356 370 5.551233 TCTCACGGAAGAAAAATCATGTCT 58.449 37.500 0.00 0.00 0.00 3.41
357 371 5.639506 TCTCACGGAAGAAAAATCATGTCTC 59.360 40.000 0.00 0.00 0.00 3.36
358 372 5.551233 TCACGGAAGAAAAATCATGTCTCT 58.449 37.500 0.00 0.00 0.00 3.10
359 373 5.639506 TCACGGAAGAAAAATCATGTCTCTC 59.360 40.000 0.00 0.00 0.00 3.20
360 374 5.409520 CACGGAAGAAAAATCATGTCTCTCA 59.590 40.000 0.00 0.00 0.00 3.27
361 375 6.093219 CACGGAAGAAAAATCATGTCTCTCAT 59.907 38.462 0.00 0.00 37.22 2.90
362 376 6.314896 ACGGAAGAAAAATCATGTCTCTCATC 59.685 38.462 0.00 0.00 34.09 2.92
363 377 6.509199 CGGAAGAAAAATCATGTCTCTCATCG 60.509 42.308 0.00 0.00 34.09 3.84
364 378 6.536582 GGAAGAAAAATCATGTCTCTCATCGA 59.463 38.462 0.00 0.00 34.09 3.59
365 379 7.065085 GGAAGAAAAATCATGTCTCTCATCGAA 59.935 37.037 0.00 0.00 34.09 3.71
366 380 7.536895 AGAAAAATCATGTCTCTCATCGAAG 57.463 36.000 0.00 0.00 34.09 3.79
367 381 7.326454 AGAAAAATCATGTCTCTCATCGAAGA 58.674 34.615 0.00 0.00 45.75 2.87
368 382 7.492020 AGAAAAATCATGTCTCTCATCGAAGAG 59.508 37.037 11.39 11.39 43.63 2.85
369 383 4.852134 ATCATGTCTCTCATCGAAGAGG 57.148 45.455 16.99 8.49 43.63 3.69
403 417 3.546002 TTTTTGTTATCGGGAAGCACG 57.454 42.857 0.00 0.00 0.00 5.34
404 418 1.444836 TTTGTTATCGGGAAGCACGG 58.555 50.000 0.00 0.00 0.00 4.94
405 419 1.022451 TTGTTATCGGGAAGCACGGC 61.022 55.000 0.00 0.00 0.00 5.68
406 420 1.153429 GTTATCGGGAAGCACGGCT 60.153 57.895 0.00 0.00 42.56 5.52
407 421 1.153449 TTATCGGGAAGCACGGCTG 60.153 57.895 0.00 0.00 39.62 4.85
408 422 1.895020 TTATCGGGAAGCACGGCTGT 61.895 55.000 0.00 0.00 39.62 4.40
433 447 2.255252 GCGGCAGCAAAATCGTGT 59.745 55.556 3.18 0.00 44.35 4.49
434 448 1.797537 GCGGCAGCAAAATCGTGTC 60.798 57.895 3.18 0.00 44.35 3.67
435 449 1.868997 CGGCAGCAAAATCGTGTCT 59.131 52.632 0.00 0.00 0.00 3.41
436 450 0.179215 CGGCAGCAAAATCGTGTCTC 60.179 55.000 0.00 0.00 0.00 3.36
437 451 1.160137 GGCAGCAAAATCGTGTCTCT 58.840 50.000 0.00 0.00 0.00 3.10
438 452 1.129437 GGCAGCAAAATCGTGTCTCTC 59.871 52.381 0.00 0.00 0.00 3.20
439 453 1.201855 GCAGCAAAATCGTGTCTCTCG 60.202 52.381 0.00 0.00 0.00 4.04
440 454 1.071605 AGCAAAATCGTGTCTCTCGC 58.928 50.000 0.00 0.00 0.00 5.03
458 472 3.773117 CGAAAGCAAAATCGTGCCT 57.227 47.368 0.00 0.00 46.14 4.75
459 473 1.606606 CGAAAGCAAAATCGTGCCTC 58.393 50.000 0.00 0.00 46.14 4.70
460 474 1.197721 CGAAAGCAAAATCGTGCCTCT 59.802 47.619 0.00 0.00 46.14 3.69
461 475 2.726066 CGAAAGCAAAATCGTGCCTCTC 60.726 50.000 0.00 0.00 46.14 3.20
462 476 1.896220 AAGCAAAATCGTGCCTCTCA 58.104 45.000 0.00 0.00 46.14 3.27
463 477 1.160137 AGCAAAATCGTGCCTCTCAC 58.840 50.000 0.00 0.00 46.14 3.51
487 501 1.569493 CAAAACCGTGCCTCTGACG 59.431 57.895 0.00 0.00 36.56 4.35
493 507 0.108615 CCGTGCCTCTGACGAAGAAT 60.109 55.000 0.00 0.00 39.21 2.40
494 508 0.994995 CGTGCCTCTGACGAAGAATG 59.005 55.000 0.00 0.00 39.21 2.67
498 514 3.124297 GTGCCTCTGACGAAGAATGAAAG 59.876 47.826 0.00 0.00 33.37 2.62
504 520 6.853362 CCTCTGACGAAGAATGAAAGAAAAAC 59.147 38.462 0.00 0.00 33.37 2.43
505 521 7.315247 TCTGACGAAGAATGAAAGAAAAACA 57.685 32.000 0.00 0.00 29.54 2.83
506 522 7.186804 TCTGACGAAGAATGAAAGAAAAACAC 58.813 34.615 0.00 0.00 29.54 3.32
507 523 5.963004 TGACGAAGAATGAAAGAAAAACACG 59.037 36.000 0.00 0.00 0.00 4.49
508 524 5.875930 ACGAAGAATGAAAGAAAAACACGT 58.124 33.333 0.00 0.00 0.00 4.49
531 547 3.641437 TTTCCATTTTTGAGAGGCACG 57.359 42.857 0.00 0.00 0.00 5.34
532 548 2.559698 TCCATTTTTGAGAGGCACGA 57.440 45.000 0.00 0.00 0.00 4.35
564 580 1.739667 GGAAGCAAAACCGTGCCTT 59.260 52.632 0.00 0.00 46.14 4.35
566 582 1.208259 GAAGCAAAACCGTGCCTTTG 58.792 50.000 0.00 0.00 46.14 2.77
573 589 2.577449 AACCGTGCCTTTGACAAAAG 57.423 45.000 1.62 0.00 42.17 2.27
577 593 3.056465 ACCGTGCCTTTGACAAAAGAAAA 60.056 39.130 1.62 0.00 44.81 2.29
612 629 3.936902 TTTCGTTTTTGAGAGACACGG 57.063 42.857 0.00 0.00 0.00 4.94
613 630 2.589798 TCGTTTTTGAGAGACACGGT 57.410 45.000 0.00 0.00 0.00 4.83
625 642 2.573869 CACGGTCGTGCCTCTCAT 59.426 61.111 10.59 0.00 39.39 2.90
626 643 1.807226 CACGGTCGTGCCTCTCATA 59.193 57.895 10.59 0.00 39.39 2.15
627 644 0.385751 CACGGTCGTGCCTCTCATAT 59.614 55.000 10.59 0.00 39.39 1.78
637 654 5.822519 TCGTGCCTCTCATATAAGCAAAATT 59.177 36.000 0.00 0.00 34.79 1.82
638 655 6.989759 TCGTGCCTCTCATATAAGCAAAATTA 59.010 34.615 0.00 0.00 34.79 1.40
659 676 2.586648 ACCTCCCTCGAAAGCAAAAT 57.413 45.000 0.00 0.00 0.00 1.82
672 689 2.282701 GCAAAATCATGCCATCACGT 57.717 45.000 0.00 0.00 40.49 4.49
716 742 5.447624 AAAATGTTAAGAAAGACGGGTGG 57.552 39.130 0.00 0.00 0.00 4.61
733 838 4.691216 CGGGTGGAAAACAAAAAGAAAACA 59.309 37.500 0.00 0.00 0.00 2.83
744 849 1.757682 AAGAAAACACCCAGAACGCA 58.242 45.000 0.00 0.00 0.00 5.24
750 855 5.885912 AGAAAACACCCAGAACGCAATATAT 59.114 36.000 0.00 0.00 0.00 0.86
774 879 3.353836 GGTTGAGAGCGCGCCAAA 61.354 61.111 30.33 14.41 0.00 3.28
776 881 1.512734 GTTGAGAGCGCGCCAAATG 60.513 57.895 30.33 0.00 0.00 2.32
777 882 2.689785 TTGAGAGCGCGCCAAATGG 61.690 57.895 30.33 0.00 38.53 3.16
778 883 3.127533 GAGAGCGCGCCAAATGGT 61.128 61.111 30.33 7.05 37.57 3.55
779 884 3.100862 GAGAGCGCGCCAAATGGTC 62.101 63.158 30.33 17.13 37.57 4.02
780 885 3.127533 GAGCGCGCCAAATGGTCT 61.128 61.111 30.33 5.17 37.57 3.85
781 886 3.100862 GAGCGCGCCAAATGGTCTC 62.101 63.158 30.33 11.81 37.57 3.36
782 887 3.430862 GCGCGCCAAATGGTCTCA 61.431 61.111 23.24 0.00 37.57 3.27
783 888 2.787249 CGCGCCAAATGGTCTCAG 59.213 61.111 0.00 0.00 37.57 3.35
786 891 2.409870 CGCCAAATGGTCTCAGGCC 61.410 63.158 0.00 0.00 42.28 5.19
787 892 1.304381 GCCAAATGGTCTCAGGCCA 60.304 57.895 0.00 0.00 39.42 5.36
788 893 1.598701 GCCAAATGGTCTCAGGCCAC 61.599 60.000 0.00 0.00 39.03 5.01
790 895 0.967380 CAAATGGTCTCAGGCCACCC 60.967 60.000 0.00 0.00 39.03 4.61
791 896 1.434513 AAATGGTCTCAGGCCACCCA 61.435 55.000 0.00 3.13 39.03 4.51
792 897 1.217057 AATGGTCTCAGGCCACCCAT 61.217 55.000 0.00 5.65 39.03 4.00
793 898 1.929860 ATGGTCTCAGGCCACCCATG 61.930 60.000 0.00 0.00 39.03 3.66
794 899 2.606587 GGTCTCAGGCCACCCATGT 61.607 63.158 5.01 0.00 0.00 3.21
796 901 1.538629 TCTCAGGCCACCCATGTGA 60.539 57.895 5.01 0.00 45.76 3.58
797 902 0.915872 TCTCAGGCCACCCATGTGAT 60.916 55.000 5.01 0.00 45.76 3.06
798 903 0.033796 CTCAGGCCACCCATGTGATT 60.034 55.000 5.01 0.00 45.76 2.57
800 905 1.000739 AGGCCACCCATGTGATTGG 59.999 57.895 5.01 0.00 45.76 3.16
801 906 1.305213 GGCCACCCATGTGATTGGT 60.305 57.895 0.00 0.00 45.76 3.67
802 907 1.606885 GGCCACCCATGTGATTGGTG 61.607 60.000 10.25 10.25 45.76 4.17
805 910 3.619938 CCCATGTGATTGGTGGGC 58.380 61.111 0.00 0.00 45.50 5.36
806 911 2.417257 CCCATGTGATTGGTGGGCG 61.417 63.158 0.00 0.00 45.50 6.13
807 912 1.678635 CCATGTGATTGGTGGGCGT 60.679 57.895 0.00 0.00 31.74 5.68
808 913 1.250154 CCATGTGATTGGTGGGCGTT 61.250 55.000 0.00 0.00 31.74 4.84
809 914 0.109179 CATGTGATTGGTGGGCGTTG 60.109 55.000 0.00 0.00 0.00 4.10
810 915 1.876497 ATGTGATTGGTGGGCGTTGC 61.876 55.000 0.00 0.00 0.00 4.17
886 1000 0.395312 GCACGCTTAATAGGGGCCTA 59.605 55.000 0.84 0.00 38.57 3.93
910 1044 2.755469 CCGGCCCATTTGGTCAGG 60.755 66.667 0.00 0.00 39.41 3.86
922 1056 0.178921 TGGTCAGGCCACTCTCTCTT 60.179 55.000 5.01 0.00 43.61 2.85
1238 1450 1.203001 ACTCCAGATCCGATCCTCTCC 60.203 57.143 4.67 0.00 0.00 3.71
1435 1655 6.183360 GCCATTTTTCTGCAATAAACTACAGC 60.183 38.462 0.00 0.00 0.00 4.40
1467 1687 1.025812 ACAGATCCGAGCTTACTCCG 58.974 55.000 0.00 0.00 40.03 4.63
1535 1755 3.929610 GACACTATCTGGTTGTCTCTTGC 59.070 47.826 0.00 0.00 0.00 4.01
1540 1760 3.462483 TCTGGTTGTCTCTTGCGTTAA 57.538 42.857 0.00 0.00 0.00 2.01
1591 1811 0.676736 TTCATTGCCCCGTTGTTTCC 59.323 50.000 0.00 0.00 0.00 3.13
1610 1830 4.460948 TCCGAGTAGTAATTTGGACCAC 57.539 45.455 0.00 0.00 0.00 4.16
1626 1846 4.292571 TGGACCACCCCATTCAGTTTATAA 59.707 41.667 0.00 0.00 34.81 0.98
1780 2000 1.729586 ACACAGCTAGTTCCTTGGGA 58.270 50.000 0.00 0.00 0.00 4.37
1900 2121 2.734591 GTCACCGCAGTGTCAGGA 59.265 61.111 0.00 0.00 44.83 3.86
1902 2123 0.320771 GTCACCGCAGTGTCAGGAAT 60.321 55.000 0.00 0.00 44.83 3.01
2001 2222 1.296715 CAGAGACAACGGGAAGGGG 59.703 63.158 0.00 0.00 0.00 4.79
2012 2233 4.404098 GAAGGGGCGCGGGAGAAA 62.404 66.667 8.83 0.00 0.00 2.52
2059 2280 1.678300 GAACGGGAGGGTCTCGACT 60.678 63.158 2.61 0.00 44.60 4.18
2089 2310 1.082104 GCCGTCTTCGTTTTGCCTG 60.082 57.895 0.00 0.00 35.01 4.85
2108 2329 4.223964 GCGCCGCCGTCTTTGATC 62.224 66.667 0.00 0.00 36.67 2.92
2109 2330 2.509336 CGCCGCCGTCTTTGATCT 60.509 61.111 0.00 0.00 0.00 2.75
2114 2335 1.699656 CGCCGTCTTTGATCTGCCTG 61.700 60.000 0.00 0.00 0.00 4.85
2148 2372 2.203523 TCGTGGTGGAGGGACGAA 60.204 61.111 0.00 0.00 39.07 3.85
2253 2477 9.542462 TTAATTTCATAGTCGAGGAAGTATTGG 57.458 33.333 0.00 0.00 0.00 3.16
2254 2478 4.585955 TCATAGTCGAGGAAGTATTGGC 57.414 45.455 0.00 0.00 0.00 4.52
2258 2495 2.428890 AGTCGAGGAAGTATTGGCAGAG 59.571 50.000 0.00 0.00 0.00 3.35
2281 2518 4.141824 GGCTAAATCAAGCAGAGTAGACCT 60.142 45.833 0.00 0.00 44.64 3.85
2385 2622 4.911514 AAACAAAACAATGTAGGTCGCT 57.088 36.364 0.00 0.00 32.02 4.93
2444 2681 2.158549 GGGCAATTCTAATGAGGGAGCT 60.159 50.000 0.00 0.00 0.00 4.09
2522 2759 2.095567 CGAATGGCGATGAATCCAATCC 60.096 50.000 0.00 0.00 44.57 3.01
2528 2765 3.820467 GGCGATGAATCCAATCCAATACA 59.180 43.478 0.00 0.00 0.00 2.29
2529 2766 4.083110 GGCGATGAATCCAATCCAATACAG 60.083 45.833 0.00 0.00 0.00 2.74
2532 2769 5.759763 CGATGAATCCAATCCAATACAGACA 59.240 40.000 0.00 0.00 0.00 3.41
2533 2770 6.429078 CGATGAATCCAATCCAATACAGACAT 59.571 38.462 0.00 0.00 0.00 3.06
2535 2772 6.064060 TGAATCCAATCCAATACAGACATCC 58.936 40.000 0.00 0.00 0.00 3.51
2536 2773 5.651612 ATCCAATCCAATACAGACATCCA 57.348 39.130 0.00 0.00 0.00 3.41
2537 2774 5.449297 TCCAATCCAATACAGACATCCAA 57.551 39.130 0.00 0.00 0.00 3.53
2547 4915 7.121168 CCAATACAGACATCCAAACAATACAGT 59.879 37.037 0.00 0.00 0.00 3.55
2552 4920 4.985538 ACATCCAAACAATACAGTGGTCT 58.014 39.130 0.00 0.00 32.68 3.85
2597 4965 6.998673 ACAAAGTTAGGGTAATATGATGGAGC 59.001 38.462 0.00 0.00 0.00 4.70
2638 5006 5.316158 AGGCCTATAGTGCAATCTTCATT 57.684 39.130 1.29 0.00 0.00 2.57
2641 5009 5.709164 GGCCTATAGTGCAATCTTCATTCAT 59.291 40.000 13.16 0.00 0.00 2.57
2644 5012 7.174599 GCCTATAGTGCAATCTTCATTCATTCT 59.825 37.037 0.00 0.00 0.00 2.40
2645 5013 9.716531 CCTATAGTGCAATCTTCATTCATTCTA 57.283 33.333 0.00 0.00 0.00 2.10
2648 5016 7.551035 AGTGCAATCTTCATTCATTCTACTC 57.449 36.000 0.00 0.00 0.00 2.59
2649 5017 6.541641 AGTGCAATCTTCATTCATTCTACTCC 59.458 38.462 0.00 0.00 0.00 3.85
2650 5018 5.824624 TGCAATCTTCATTCATTCTACTCCC 59.175 40.000 0.00 0.00 0.00 4.30
2651 5019 6.060788 GCAATCTTCATTCATTCTACTCCCT 58.939 40.000 0.00 0.00 0.00 4.20
2652 5020 6.204495 GCAATCTTCATTCATTCTACTCCCTC 59.796 42.308 0.00 0.00 0.00 4.30
2653 5021 5.878406 TCTTCATTCATTCTACTCCCTCC 57.122 43.478 0.00 0.00 0.00 4.30
2654 5022 4.342378 TCTTCATTCATTCTACTCCCTCCG 59.658 45.833 0.00 0.00 0.00 4.63
2655 5023 3.643237 TCATTCATTCTACTCCCTCCGT 58.357 45.455 0.00 0.00 0.00 4.69
2656 5024 4.030913 TCATTCATTCTACTCCCTCCGTT 58.969 43.478 0.00 0.00 0.00 4.44
2657 5025 4.099573 TCATTCATTCTACTCCCTCCGTTC 59.900 45.833 0.00 0.00 0.00 3.95
2658 5026 2.385803 TCATTCTACTCCCTCCGTTCC 58.614 52.381 0.00 0.00 0.00 3.62
2659 5027 2.024273 TCATTCTACTCCCTCCGTTCCT 60.024 50.000 0.00 0.00 0.00 3.36
2660 5028 3.203710 TCATTCTACTCCCTCCGTTCCTA 59.796 47.826 0.00 0.00 0.00 2.94
2661 5029 3.744940 TTCTACTCCCTCCGTTCCTAA 57.255 47.619 0.00 0.00 0.00 2.69
2662 5030 3.744940 TCTACTCCCTCCGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
2663 5031 4.261411 TCTACTCCCTCCGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
2664 5032 5.393068 TCTACTCCCTCCGTTCCTAAATA 57.607 43.478 0.00 0.00 0.00 1.40
2665 5033 5.961897 TCTACTCCCTCCGTTCCTAAATAT 58.038 41.667 0.00 0.00 0.00 1.28
2666 5034 7.095183 TCTACTCCCTCCGTTCCTAAATATA 57.905 40.000 0.00 0.00 0.00 0.86
2667 5035 7.529555 TCTACTCCCTCCGTTCCTAAATATAA 58.470 38.462 0.00 0.00 0.00 0.98
2668 5036 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
2669 5037 5.543020 ACTCCCTCCGTTCCTAAATATAAGG 59.457 44.000 0.00 0.00 35.26 2.69
2670 5038 5.470501 TCCCTCCGTTCCTAAATATAAGGT 58.529 41.667 4.41 0.00 35.48 3.50
2671 5039 5.306160 TCCCTCCGTTCCTAAATATAAGGTG 59.694 44.000 4.41 0.00 35.48 4.00
2672 5040 5.071384 CCCTCCGTTCCTAAATATAAGGTGT 59.929 44.000 4.41 0.00 35.48 4.16
2673 5041 6.268387 CCCTCCGTTCCTAAATATAAGGTGTA 59.732 42.308 4.41 0.00 35.48 2.90
2674 5042 7.038516 CCCTCCGTTCCTAAATATAAGGTGTAT 60.039 40.741 4.41 0.00 35.48 2.29
2675 5043 8.373220 CCTCCGTTCCTAAATATAAGGTGTATT 58.627 37.037 4.41 0.00 35.48 1.89
2696 5064 9.291664 TGTATTAGTTTTTCAAAAAGTCAACCG 57.708 29.630 6.20 0.00 0.00 4.44
2697 5065 9.292846 GTATTAGTTTTTCAAAAAGTCAACCGT 57.707 29.630 6.20 0.00 0.00 4.83
2698 5066 8.766000 ATTAGTTTTTCAAAAAGTCAACCGTT 57.234 26.923 6.20 0.00 0.00 4.44
2699 5067 6.460664 AGTTTTTCAAAAAGTCAACCGTTG 57.539 33.333 4.78 4.78 0.00 4.10
2700 5068 5.986741 AGTTTTTCAAAAAGTCAACCGTTGT 59.013 32.000 11.01 0.00 0.00 3.32
2701 5069 6.144886 AGTTTTTCAAAAAGTCAACCGTTGTC 59.855 34.615 11.01 5.81 0.00 3.18
2702 5070 5.379732 TTTCAAAAAGTCAACCGTTGTCT 57.620 34.783 11.01 8.08 0.00 3.41
2703 5071 6.497785 TTTCAAAAAGTCAACCGTTGTCTA 57.502 33.333 10.80 0.00 0.00 2.59
2704 5072 6.687081 TTCAAAAAGTCAACCGTTGTCTAT 57.313 33.333 10.80 2.23 0.00 1.98
2705 5073 6.055231 TCAAAAAGTCAACCGTTGTCTATG 57.945 37.500 10.80 10.39 0.00 2.23
2706 5074 5.587043 TCAAAAAGTCAACCGTTGTCTATGT 59.413 36.000 10.80 0.00 0.00 2.29
2707 5075 6.094325 TCAAAAAGTCAACCGTTGTCTATGTT 59.906 34.615 10.80 4.51 0.00 2.71
2708 5076 6.445357 AAAAGTCAACCGTTGTCTATGTTT 57.555 33.333 10.80 6.25 0.00 2.83
2709 5077 5.418310 AAGTCAACCGTTGTCTATGTTTG 57.582 39.130 10.80 0.00 0.00 2.93
2710 5078 4.699637 AGTCAACCGTTGTCTATGTTTGA 58.300 39.130 11.01 0.00 0.00 2.69
2711 5079 4.510340 AGTCAACCGTTGTCTATGTTTGAC 59.490 41.667 11.01 8.26 35.21 3.18
2712 5080 3.810941 TCAACCGTTGTCTATGTTTGACC 59.189 43.478 11.01 0.00 33.83 4.02
2713 5081 3.478857 ACCGTTGTCTATGTTTGACCA 57.521 42.857 0.00 0.00 33.83 4.02
2714 5082 3.811083 ACCGTTGTCTATGTTTGACCAA 58.189 40.909 0.00 0.00 33.83 3.67
2715 5083 3.562557 ACCGTTGTCTATGTTTGACCAAC 59.437 43.478 0.00 0.00 33.83 3.77
2716 5084 3.813166 CCGTTGTCTATGTTTGACCAACT 59.187 43.478 0.00 0.00 36.21 3.16
2717 5085 4.274950 CCGTTGTCTATGTTTGACCAACTT 59.725 41.667 0.00 0.00 36.21 2.66
2718 5086 5.220970 CCGTTGTCTATGTTTGACCAACTTT 60.221 40.000 0.00 0.00 36.21 2.66
2719 5087 6.017770 CCGTTGTCTATGTTTGACCAACTTTA 60.018 38.462 0.00 0.00 36.21 1.85
2720 5088 6.849305 CGTTGTCTATGTTTGACCAACTTTAC 59.151 38.462 0.00 0.00 36.21 2.01
2721 5089 7.466185 CGTTGTCTATGTTTGACCAACTTTACA 60.466 37.037 0.00 0.00 36.21 2.41
2722 5090 7.490962 TGTCTATGTTTGACCAACTTTACAG 57.509 36.000 0.00 0.00 36.21 2.74
2723 5091 6.017440 TGTCTATGTTTGACCAACTTTACAGC 60.017 38.462 0.00 0.00 36.21 4.40
2724 5092 6.017440 GTCTATGTTTGACCAACTTTACAGCA 60.017 38.462 0.00 0.00 36.21 4.41
2725 5093 5.590530 ATGTTTGACCAACTTTACAGCAA 57.409 34.783 0.00 0.00 36.21 3.91
2726 5094 5.392767 TGTTTGACCAACTTTACAGCAAA 57.607 34.783 0.00 0.00 36.21 3.68
2727 5095 5.784177 TGTTTGACCAACTTTACAGCAAAA 58.216 33.333 0.00 0.00 36.21 2.44
2728 5096 6.402222 TGTTTGACCAACTTTACAGCAAAAT 58.598 32.000 0.00 0.00 36.21 1.82
2729 5097 7.548097 TGTTTGACCAACTTTACAGCAAAATA 58.452 30.769 0.00 0.00 36.21 1.40
2730 5098 8.200792 TGTTTGACCAACTTTACAGCAAAATAT 58.799 29.630 0.00 0.00 36.21 1.28
2731 5099 9.685828 GTTTGACCAACTTTACAGCAAAATATA 57.314 29.630 0.00 0.00 31.92 0.86
2851 5219 9.706691 TGTCTATAAACTTGGTCAAACTTAGAG 57.293 33.333 0.00 0.00 0.00 2.43
2852 5220 9.924650 GTCTATAAACTTGGTCAAACTTAGAGA 57.075 33.333 0.00 5.44 0.00 3.10
2869 5237 8.575649 ACTTAGAGAAGTTTGACTTTTTGGAA 57.424 30.769 0.00 0.00 43.70 3.53
2870 5238 9.020731 ACTTAGAGAAGTTTGACTTTTTGGAAA 57.979 29.630 0.00 0.00 43.70 3.13
2871 5239 9.855021 CTTAGAGAAGTTTGACTTTTTGGAAAA 57.145 29.630 0.00 0.00 38.80 2.29
2897 5265 9.720769 AATAATACACCTTATATTGAGGAACGG 57.279 33.333 10.81 0.00 37.72 4.44
2898 5266 6.989155 ATACACCTTATATTGAGGAACGGA 57.011 37.500 10.81 0.00 37.72 4.69
2899 5267 5.277857 ACACCTTATATTGAGGAACGGAG 57.722 43.478 10.81 0.00 37.72 4.63
2900 5268 4.101119 ACACCTTATATTGAGGAACGGAGG 59.899 45.833 10.81 0.00 37.72 4.30
2901 5269 3.646637 ACCTTATATTGAGGAACGGAGGG 59.353 47.826 10.81 0.00 37.72 4.30
2902 5270 3.901844 CCTTATATTGAGGAACGGAGGGA 59.098 47.826 0.00 0.00 36.33 4.20
2903 5271 4.021016 CCTTATATTGAGGAACGGAGGGAG 60.021 50.000 0.00 0.00 36.33 4.30
2904 5272 2.544844 TATTGAGGAACGGAGGGAGT 57.455 50.000 0.00 0.00 0.00 3.85
2932 5300 1.146358 GCTCGGTCCGGAATTTCTCG 61.146 60.000 5.23 3.95 0.00 4.04
2987 5378 8.751335 CAAAATGTTGTATGTTAAAGCGAGTTT 58.249 29.630 0.00 0.00 0.00 2.66
2994 5385 7.136119 TGTATGTTAAAGCGAGTTTTGAAAGG 58.864 34.615 0.00 0.00 0.00 3.11
3018 5409 7.715686 AGGTAGGTAAAGCAATACTAGAAATGC 59.284 37.037 0.00 3.46 39.06 3.56
3095 5486 7.872993 GTCCATTCATATATCTTGTCGAAGGAA 59.127 37.037 0.00 0.00 0.00 3.36
3109 5500 8.662781 TTGTCGAAGGAAATGATATTAGAAGG 57.337 34.615 0.00 0.00 0.00 3.46
3153 5544 5.848406 TGCTACCCCTTTTGTTGTAATTTG 58.152 37.500 0.00 0.00 0.00 2.32
3259 5659 3.004734 GCCTGCCAAGATACGCATAATTT 59.995 43.478 0.00 0.00 33.78 1.82
3306 5711 2.189191 ATCTGAAGGAGCTTGCGCCA 62.189 55.000 17.01 0.00 36.60 5.69
3325 5730 1.806542 CATACATGCATAAGGTCGGGC 59.193 52.381 0.00 0.00 0.00 6.13
3664 6088 5.374154 TGGGCAACTGAATTATCCCCTTATA 59.626 40.000 0.00 0.00 33.35 0.98
3665 6089 6.046643 TGGGCAACTGAATTATCCCCTTATAT 59.953 38.462 0.00 0.00 33.35 0.86
3884 6346 4.965814 ACTAAGGATGCATGTGACCTATG 58.034 43.478 2.46 3.57 32.06 2.23
3958 6420 8.597167 TGGTGATAATAATATGTGGAGAAGAGG 58.403 37.037 0.00 0.00 0.00 3.69
3959 6421 8.816894 GGTGATAATAATATGTGGAGAAGAGGA 58.183 37.037 0.00 0.00 0.00 3.71
3986 6466 4.747108 ACGATGTCTGTCTGTCTTCTTTTG 59.253 41.667 0.00 0.00 0.00 2.44
3990 6470 5.245531 TGTCTGTCTGTCTTCTTTTGTTGT 58.754 37.500 0.00 0.00 0.00 3.32
4073 6675 5.416083 TGATGTGTAAGTAACCGAATCTGG 58.584 41.667 0.00 0.00 0.00 3.86
4103 6705 1.393539 GTGGGTGACAATCGATTCACG 59.606 52.381 19.11 7.98 42.67 4.35
4110 6712 5.398711 GGTGACAATCGATTCACGTACTATC 59.601 44.000 19.11 4.99 42.67 2.08
4239 7092 0.602638 TGCTGCAGAACACTAACCGG 60.603 55.000 20.43 0.00 0.00 5.28
4246 7099 0.883833 GAACACTAACCGGTCGAGGA 59.116 55.000 8.04 0.00 34.73 3.71
4247 7100 1.270550 GAACACTAACCGGTCGAGGAA 59.729 52.381 8.04 0.00 34.73 3.36
4248 7101 0.600057 ACACTAACCGGTCGAGGAAC 59.400 55.000 8.04 0.00 34.73 3.62
4330 7229 3.772853 TTGAGCAGCAACACCGCCT 62.773 57.895 0.00 0.00 0.00 5.52
4331 7230 2.980233 GAGCAGCAACACCGCCTT 60.980 61.111 0.00 0.00 0.00 4.35
4332 7231 1.671054 GAGCAGCAACACCGCCTTA 60.671 57.895 0.00 0.00 0.00 2.69
4347 7246 0.967380 CCTTACGGTGGGGTACGTCT 60.967 60.000 0.00 0.00 43.02 4.18
4353 7252 1.516161 GGTGGGGTACGTCTCAAAAC 58.484 55.000 0.00 0.00 0.00 2.43
4362 7261 4.092968 GGTACGTCTCAAAACATTAGCTGG 59.907 45.833 0.00 0.00 0.00 4.85
4413 7358 3.432890 GCTTTATCAAGGAGGAGGAGGTG 60.433 52.174 0.00 0.00 0.00 4.00
4492 7476 0.304705 AAAGACACGCTTGCGACTTG 59.695 50.000 22.03 11.78 36.80 3.16
4507 7491 1.736681 GACTTGGCAGATCTCACAAGC 59.263 52.381 25.14 17.78 42.97 4.01
4512 7496 2.284190 GGCAGATCTCACAAGCTTACC 58.716 52.381 0.00 0.00 0.00 2.85
4513 7497 2.355108 GGCAGATCTCACAAGCTTACCA 60.355 50.000 0.00 0.00 0.00 3.25
4514 7498 3.338249 GCAGATCTCACAAGCTTACCAA 58.662 45.455 0.00 0.00 0.00 3.67
4515 7499 3.944015 GCAGATCTCACAAGCTTACCAAT 59.056 43.478 0.00 0.00 0.00 3.16
4516 7500 4.034975 GCAGATCTCACAAGCTTACCAATC 59.965 45.833 0.00 0.00 0.00 2.67
4517 7501 5.426504 CAGATCTCACAAGCTTACCAATCT 58.573 41.667 0.00 1.84 0.00 2.40
4518 7502 5.879223 CAGATCTCACAAGCTTACCAATCTT 59.121 40.000 0.00 0.00 0.00 2.40
4519 7503 7.044181 CAGATCTCACAAGCTTACCAATCTTA 58.956 38.462 0.00 0.00 0.00 2.10
4520 7504 7.224362 CAGATCTCACAAGCTTACCAATCTTAG 59.776 40.741 0.00 0.00 0.00 2.18
4521 7505 6.605471 TCTCACAAGCTTACCAATCTTAGA 57.395 37.500 0.00 0.00 0.00 2.10
4522 7506 6.398918 TCTCACAAGCTTACCAATCTTAGAC 58.601 40.000 0.00 0.00 0.00 2.59
4523 7507 6.211584 TCTCACAAGCTTACCAATCTTAGACT 59.788 38.462 0.00 0.00 0.00 3.24
4524 7508 7.396339 TCTCACAAGCTTACCAATCTTAGACTA 59.604 37.037 0.00 0.00 0.00 2.59
4525 7509 7.548097 TCACAAGCTTACCAATCTTAGACTAG 58.452 38.462 0.00 0.00 0.00 2.57
4526 7510 6.256757 CACAAGCTTACCAATCTTAGACTAGC 59.743 42.308 0.00 0.00 0.00 3.42
4527 7511 5.538849 AGCTTACCAATCTTAGACTAGCC 57.461 43.478 0.00 0.00 0.00 3.93
4528 7512 4.962995 AGCTTACCAATCTTAGACTAGCCA 59.037 41.667 0.00 0.00 0.00 4.75
4529 7513 5.051153 GCTTACCAATCTTAGACTAGCCAC 58.949 45.833 0.00 0.00 0.00 5.01
4530 7514 5.395324 GCTTACCAATCTTAGACTAGCCACA 60.395 44.000 0.00 0.00 0.00 4.17
4531 7515 4.744795 ACCAATCTTAGACTAGCCACAG 57.255 45.455 0.00 0.00 0.00 3.66
4532 7516 4.097418 ACCAATCTTAGACTAGCCACAGT 58.903 43.478 0.00 0.00 0.00 3.55
4533 7517 4.081420 ACCAATCTTAGACTAGCCACAGTG 60.081 45.833 0.00 0.00 0.00 3.66
4534 7518 4.437239 CAATCTTAGACTAGCCACAGTGG 58.563 47.826 16.16 16.16 41.55 4.00
4535 7519 2.457598 TCTTAGACTAGCCACAGTGGG 58.542 52.381 21.77 7.25 38.19 4.61
4536 7520 2.042569 TCTTAGACTAGCCACAGTGGGA 59.957 50.000 21.77 3.56 38.19 4.37
4537 7521 2.145397 TAGACTAGCCACAGTGGGAG 57.855 55.000 21.77 0.00 38.19 4.30
4538 7522 0.115349 AGACTAGCCACAGTGGGAGT 59.885 55.000 21.77 2.87 38.19 3.85
4539 7523 1.358103 AGACTAGCCACAGTGGGAGTA 59.642 52.381 21.77 0.00 38.19 2.59
4540 7524 2.176889 GACTAGCCACAGTGGGAGTAA 58.823 52.381 21.77 0.00 38.19 2.24
4541 7525 1.900486 ACTAGCCACAGTGGGAGTAAC 59.100 52.381 21.77 3.06 38.19 2.50
4542 7526 2.180276 CTAGCCACAGTGGGAGTAACT 58.820 52.381 21.77 10.69 38.19 2.24
4543 7527 1.435256 AGCCACAGTGGGAGTAACTT 58.565 50.000 21.77 0.00 38.19 2.66
4544 7528 1.348036 AGCCACAGTGGGAGTAACTTC 59.652 52.381 21.77 0.78 38.19 3.01
4545 7529 1.071699 GCCACAGTGGGAGTAACTTCA 59.928 52.381 21.77 0.00 38.19 3.02
4546 7530 2.872038 GCCACAGTGGGAGTAACTTCAG 60.872 54.545 21.77 0.00 38.19 3.02
4547 7531 2.368875 CCACAGTGGGAGTAACTTCAGT 59.631 50.000 12.40 0.00 32.67 3.41
4548 7532 3.576982 CCACAGTGGGAGTAACTTCAGTA 59.423 47.826 12.40 0.00 32.67 2.74
4549 7533 4.322049 CCACAGTGGGAGTAACTTCAGTAG 60.322 50.000 12.40 0.00 32.67 2.57
4550 7534 4.281182 CACAGTGGGAGTAACTTCAGTAGT 59.719 45.833 0.00 0.00 39.32 2.73
4551 7535 5.475909 CACAGTGGGAGTAACTTCAGTAGTA 59.524 44.000 0.00 0.00 35.54 1.82
4552 7536 6.015688 CACAGTGGGAGTAACTTCAGTAGTAA 60.016 42.308 0.00 0.00 35.54 2.24
4553 7537 6.015603 ACAGTGGGAGTAACTTCAGTAGTAAC 60.016 42.308 0.00 0.00 35.54 2.50
4554 7538 6.015688 CAGTGGGAGTAACTTCAGTAGTAACA 60.016 42.308 0.00 0.00 35.54 2.41
4555 7539 6.724905 AGTGGGAGTAACTTCAGTAGTAACAT 59.275 38.462 0.00 0.00 35.54 2.71
4556 7540 7.034397 GTGGGAGTAACTTCAGTAGTAACATC 58.966 42.308 0.00 0.00 35.54 3.06
4557 7541 6.127814 TGGGAGTAACTTCAGTAGTAACATCG 60.128 42.308 0.00 0.00 35.54 3.84
4558 7542 6.094603 GGGAGTAACTTCAGTAGTAACATCGA 59.905 42.308 0.00 0.00 35.54 3.59
4559 7543 7.188157 GGAGTAACTTCAGTAGTAACATCGAG 58.812 42.308 0.00 0.00 35.54 4.04
4560 7544 7.148272 GGAGTAACTTCAGTAGTAACATCGAGT 60.148 40.741 0.00 0.00 35.54 4.18
4561 7545 7.750769 AGTAACTTCAGTAGTAACATCGAGTC 58.249 38.462 0.00 0.00 35.54 3.36
4562 7546 5.564048 ACTTCAGTAGTAACATCGAGTCC 57.436 43.478 0.00 0.00 34.56 3.85
4563 7547 5.008331 ACTTCAGTAGTAACATCGAGTCCA 58.992 41.667 0.00 0.00 34.56 4.02
4564 7548 5.475909 ACTTCAGTAGTAACATCGAGTCCAA 59.524 40.000 0.00 0.00 34.56 3.53
4565 7549 5.306532 TCAGTAGTAACATCGAGTCCAAC 57.693 43.478 0.00 0.00 0.00 3.77
4566 7550 5.008331 TCAGTAGTAACATCGAGTCCAACT 58.992 41.667 0.00 0.00 0.00 3.16
4567 7551 5.123502 TCAGTAGTAACATCGAGTCCAACTC 59.876 44.000 0.00 0.00 41.71 3.01
4568 7552 5.008331 AGTAGTAACATCGAGTCCAACTCA 58.992 41.667 7.78 0.00 45.30 3.41
4569 7553 4.442375 AGTAACATCGAGTCCAACTCAG 57.558 45.455 7.78 1.37 45.30 3.35
4570 7554 3.827302 AGTAACATCGAGTCCAACTCAGT 59.173 43.478 7.78 0.61 45.30 3.41
4571 7555 5.008331 AGTAACATCGAGTCCAACTCAGTA 58.992 41.667 7.78 0.00 45.30 2.74
4572 7556 4.866508 AACATCGAGTCCAACTCAGTAA 57.133 40.909 7.78 0.00 45.30 2.24
4573 7557 4.175787 ACATCGAGTCCAACTCAGTAAC 57.824 45.455 7.78 0.00 45.30 2.50
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 6.968904 CGATGAAAATGGTTCGAGATTTTGAT 59.031 34.615 13.49 11.42 33.03 2.57
24 25 1.927210 CGCGAGGAATCCAACGATG 59.073 57.895 19.24 9.19 0.00 3.84
148 151 3.326747 GTGCCTCACGAAAATGACTACT 58.673 45.455 0.00 0.00 0.00 2.57
191 194 2.473540 CGTGAGATTTTGCTTCTGCGAG 60.474 50.000 0.00 0.00 43.34 5.03
194 197 1.806542 TCCGTGAGATTTTGCTTCTGC 59.193 47.619 0.00 0.00 40.20 4.26
196 199 3.077359 CCTTCCGTGAGATTTTGCTTCT 58.923 45.455 0.00 0.00 0.00 2.85
237 247 1.337447 CGGCTACCTCTCGAAAACCAA 60.337 52.381 0.00 0.00 0.00 3.67
239 249 0.245813 ACGGCTACCTCTCGAAAACC 59.754 55.000 0.00 0.00 0.00 3.27
260 272 1.497722 GTTTTGCTTCCGCGAGAGG 59.502 57.895 8.23 4.88 39.65 3.69
268 280 3.057946 GTGAGAGACATGGTTTTGCTTCC 60.058 47.826 0.00 0.00 0.00 3.46
278 290 3.653344 TGTTTCTTCGTGAGAGACATGG 58.347 45.455 9.59 0.00 42.63 3.66
281 293 2.098607 ACGTGTTTCTTCGTGAGAGACA 59.901 45.455 9.59 9.59 44.57 3.41
283 295 3.431922 AACGTGTTTCTTCGTGAGAGA 57.568 42.857 0.00 0.00 43.69 3.10
332 346 5.641209 AGACATGATTTTTCTTCCGTGAGAG 59.359 40.000 0.00 0.00 0.00 3.20
337 351 5.551233 TGAGAGACATGATTTTTCTTCCGT 58.449 37.500 0.00 0.00 0.00 4.69
340 354 7.531280 TCGATGAGAGACATGATTTTTCTTC 57.469 36.000 0.00 0.00 39.56 2.87
341 355 7.821359 TCTTCGATGAGAGACATGATTTTTCTT 59.179 33.333 0.00 0.00 39.56 2.52
342 356 7.326454 TCTTCGATGAGAGACATGATTTTTCT 58.674 34.615 0.00 0.00 39.56 2.52
343 357 7.254387 CCTCTTCGATGAGAGACATGATTTTTC 60.254 40.741 25.43 0.00 44.78 2.29
344 358 6.538021 CCTCTTCGATGAGAGACATGATTTTT 59.462 38.462 25.43 0.00 44.78 1.94
345 359 6.047870 CCTCTTCGATGAGAGACATGATTTT 58.952 40.000 25.43 0.00 44.78 1.82
346 360 5.362143 TCCTCTTCGATGAGAGACATGATTT 59.638 40.000 25.43 0.00 44.78 2.17
347 361 4.892345 TCCTCTTCGATGAGAGACATGATT 59.108 41.667 25.43 0.00 44.78 2.57
348 362 4.468713 TCCTCTTCGATGAGAGACATGAT 58.531 43.478 25.43 0.00 44.78 2.45
349 363 3.891049 TCCTCTTCGATGAGAGACATGA 58.109 45.455 25.43 12.55 44.78 3.07
350 364 4.645762 TTCCTCTTCGATGAGAGACATG 57.354 45.455 25.43 10.70 44.78 3.21
351 365 4.648762 ACATTCCTCTTCGATGAGAGACAT 59.351 41.667 25.43 10.01 44.78 3.06
352 366 4.019858 ACATTCCTCTTCGATGAGAGACA 58.980 43.478 25.43 8.35 44.78 3.41
353 367 4.647424 ACATTCCTCTTCGATGAGAGAC 57.353 45.455 25.43 0.00 44.78 3.36
354 368 9.913310 ATATATACATTCCTCTTCGATGAGAGA 57.087 33.333 25.43 18.26 44.78 3.10
383 397 2.226912 CCGTGCTTCCCGATAACAAAAA 59.773 45.455 0.00 0.00 0.00 1.94
384 398 1.807742 CCGTGCTTCCCGATAACAAAA 59.192 47.619 0.00 0.00 0.00 2.44
385 399 1.444836 CCGTGCTTCCCGATAACAAA 58.555 50.000 0.00 0.00 0.00 2.83
386 400 1.022451 GCCGTGCTTCCCGATAACAA 61.022 55.000 0.00 0.00 0.00 2.83
387 401 1.448893 GCCGTGCTTCCCGATAACA 60.449 57.895 0.00 0.00 0.00 2.41
388 402 1.153429 AGCCGTGCTTCCCGATAAC 60.153 57.895 0.00 0.00 33.89 1.89
389 403 1.153449 CAGCCGTGCTTCCCGATAA 60.153 57.895 0.00 0.00 36.40 1.75
390 404 2.355986 ACAGCCGTGCTTCCCGATA 61.356 57.895 0.00 0.00 36.40 2.92
391 405 3.706373 ACAGCCGTGCTTCCCGAT 61.706 61.111 0.00 0.00 36.40 4.18
392 406 4.680237 CACAGCCGTGCTTCCCGA 62.680 66.667 0.00 0.00 36.40 5.14
415 429 2.254951 CACGATTTTGCTGCCGCA 59.745 55.556 0.00 0.00 46.24 5.69
416 430 1.797537 GACACGATTTTGCTGCCGC 60.798 57.895 0.00 0.00 0.00 6.53
417 431 0.179215 GAGACACGATTTTGCTGCCG 60.179 55.000 0.00 0.00 0.00 5.69
418 432 1.129437 GAGAGACACGATTTTGCTGCC 59.871 52.381 0.00 0.00 0.00 4.85
419 433 1.201855 CGAGAGACACGATTTTGCTGC 60.202 52.381 0.00 0.00 0.00 5.25
420 434 1.201855 GCGAGAGACACGATTTTGCTG 60.202 52.381 0.00 0.00 0.00 4.41
421 435 1.071605 GCGAGAGACACGATTTTGCT 58.928 50.000 0.00 0.00 0.00 3.91
422 436 0.246912 CGCGAGAGACACGATTTTGC 60.247 55.000 0.00 0.00 0.00 3.68
423 437 1.336877 TCGCGAGAGACACGATTTTG 58.663 50.000 3.71 0.00 34.84 2.44
424 438 2.060326 TTCGCGAGAGACACGATTTT 57.940 45.000 9.59 0.00 43.69 1.82
425 439 1.986378 CTTTCGCGAGAGACACGATTT 59.014 47.619 21.21 0.00 43.69 2.17
426 440 1.618861 CTTTCGCGAGAGACACGATT 58.381 50.000 21.21 0.00 43.69 3.34
427 441 0.798771 GCTTTCGCGAGAGACACGAT 60.799 55.000 28.81 0.00 43.69 3.73
428 442 1.442184 GCTTTCGCGAGAGACACGA 60.442 57.895 28.81 0.00 43.69 4.35
429 443 1.275471 TTGCTTTCGCGAGAGACACG 61.275 55.000 28.81 4.66 43.69 4.49
430 444 0.859232 TTTGCTTTCGCGAGAGACAC 59.141 50.000 28.81 12.61 43.69 3.67
431 445 1.577468 TTTTGCTTTCGCGAGAGACA 58.423 45.000 28.81 21.57 43.69 3.41
432 446 2.763619 GATTTTGCTTTCGCGAGAGAC 58.236 47.619 28.81 19.47 43.69 3.36
433 447 1.390123 CGATTTTGCTTTCGCGAGAGA 59.610 47.619 28.81 12.02 43.69 3.10
434 448 1.126846 ACGATTTTGCTTTCGCGAGAG 59.873 47.619 21.42 21.42 43.69 3.20
435 449 1.136363 CACGATTTTGCTTTCGCGAGA 60.136 47.619 9.59 3.35 38.91 4.04
436 450 1.241744 CACGATTTTGCTTTCGCGAG 58.758 50.000 9.59 0.00 38.91 5.03
437 451 0.724453 GCACGATTTTGCTTTCGCGA 60.724 50.000 3.71 3.71 39.59 5.87
438 452 1.664643 GGCACGATTTTGCTTTCGCG 61.665 55.000 0.00 0.00 42.56 5.87
439 453 0.387239 AGGCACGATTTTGCTTTCGC 60.387 50.000 0.00 0.00 42.56 4.70
440 454 1.197721 AGAGGCACGATTTTGCTTTCG 59.802 47.619 0.00 0.00 42.56 3.46
441 455 2.226437 TGAGAGGCACGATTTTGCTTTC 59.774 45.455 0.00 0.00 42.56 2.62
442 456 2.030805 GTGAGAGGCACGATTTTGCTTT 60.031 45.455 0.00 0.00 42.56 3.51
443 457 1.537202 GTGAGAGGCACGATTTTGCTT 59.463 47.619 0.00 0.00 42.56 3.91
444 458 1.160137 GTGAGAGGCACGATTTTGCT 58.840 50.000 0.00 0.00 42.56 3.91
445 459 3.683581 GTGAGAGGCACGATTTTGC 57.316 52.632 0.00 0.00 42.18 3.68
456 470 0.875059 GGTTTTGCTTCCGTGAGAGG 59.125 55.000 0.00 0.00 0.00 3.69
457 471 0.512952 CGGTTTTGCTTCCGTGAGAG 59.487 55.000 0.00 0.00 41.58 3.20
458 472 2.612200 CGGTTTTGCTTCCGTGAGA 58.388 52.632 0.00 0.00 41.58 3.27
464 478 1.172812 AGAGGCACGGTTTTGCTTCC 61.173 55.000 4.54 0.00 46.96 3.46
465 479 0.040067 CAGAGGCACGGTTTTGCTTC 60.040 55.000 0.28 0.28 46.31 3.86
514 530 1.200020 GGTCGTGCCTCTCAAAAATGG 59.800 52.381 0.00 0.00 0.00 3.16
516 532 2.270352 TGGTCGTGCCTCTCAAAAAT 57.730 45.000 1.06 0.00 38.35 1.82
520 536 1.375908 GCATGGTCGTGCCTCTCAA 60.376 57.895 3.93 0.00 39.18 3.02
521 537 2.265739 GCATGGTCGTGCCTCTCA 59.734 61.111 3.93 0.00 39.18 3.27
589 605 5.163693 ACCGTGTCTCTCAAAAACGAAAAAT 60.164 36.000 0.00 0.00 36.38 1.82
601 618 2.643272 GCACGACCGTGTCTCTCA 59.357 61.111 21.38 0.00 46.90 3.27
608 625 0.385751 ATATGAGAGGCACGACCGTG 59.614 55.000 17.19 17.19 46.52 4.94
612 629 3.371102 TGCTTATATGAGAGGCACGAC 57.629 47.619 0.00 0.00 0.00 4.34
613 630 4.400529 TTTGCTTATATGAGAGGCACGA 57.599 40.909 0.00 0.00 32.47 4.35
625 642 8.197592 TCGAGGGAGGTATAATTTTGCTTATA 57.802 34.615 0.00 0.00 0.00 0.98
626 643 7.074653 TCGAGGGAGGTATAATTTTGCTTAT 57.925 36.000 0.00 0.00 0.00 1.73
627 644 6.488769 TCGAGGGAGGTATAATTTTGCTTA 57.511 37.500 0.00 0.00 0.00 3.09
637 654 4.829872 TTTTGCTTTCGAGGGAGGTATA 57.170 40.909 0.00 0.00 0.00 1.47
638 655 3.713826 TTTTGCTTTCGAGGGAGGTAT 57.286 42.857 0.00 0.00 0.00 2.73
645 662 2.094597 TGGCATGATTTTGCTTTCGAGG 60.095 45.455 0.00 0.00 42.38 4.63
690 716 7.094549 CCACCCGTCTTTCTTAACATTTTATCA 60.095 37.037 0.00 0.00 0.00 2.15
691 717 7.120138 TCCACCCGTCTTTCTTAACATTTTATC 59.880 37.037 0.00 0.00 0.00 1.75
698 724 3.842007 TTCCACCCGTCTTTCTTAACA 57.158 42.857 0.00 0.00 0.00 2.41
711 737 5.106475 GGTGTTTTCTTTTTGTTTTCCACCC 60.106 40.000 0.00 0.00 34.07 4.61
716 742 7.295201 GTTCTGGGTGTTTTCTTTTTGTTTTC 58.705 34.615 0.00 0.00 0.00 2.29
733 838 3.069016 TCGTCATATATTGCGTTCTGGGT 59.931 43.478 5.83 0.00 0.00 4.51
744 849 4.547532 GCTCTCAACCGTCGTCATATATT 58.452 43.478 0.00 0.00 0.00 1.28
750 855 2.254350 CGCTCTCAACCGTCGTCA 59.746 61.111 0.00 0.00 0.00 4.35
770 875 0.967380 GGTGGCCTGAGACCATTTGG 60.967 60.000 3.32 0.00 39.95 3.28
771 876 0.967380 GGGTGGCCTGAGACCATTTG 60.967 60.000 11.82 0.00 39.95 2.32
772 877 1.384191 GGGTGGCCTGAGACCATTT 59.616 57.895 11.82 0.00 39.95 2.32
773 878 1.217057 ATGGGTGGCCTGAGACCATT 61.217 55.000 11.82 0.00 38.73 3.16
774 879 1.620589 ATGGGTGGCCTGAGACCAT 60.621 57.895 11.82 10.92 39.95 3.55
776 881 2.273449 CATGGGTGGCCTGAGACC 59.727 66.667 3.32 2.09 0.00 3.85
777 882 1.377725 CACATGGGTGGCCTGAGAC 60.378 63.158 3.32 0.00 41.45 3.36
778 883 0.915872 ATCACATGGGTGGCCTGAGA 60.916 55.000 3.32 0.00 45.32 3.27
779 884 0.033796 AATCACATGGGTGGCCTGAG 60.034 55.000 3.32 0.00 45.32 3.35
780 885 0.323633 CAATCACATGGGTGGCCTGA 60.324 55.000 3.32 0.00 45.32 3.86
781 886 1.324740 CCAATCACATGGGTGGCCTG 61.325 60.000 3.32 0.00 45.32 4.85
782 887 1.000739 CCAATCACATGGGTGGCCT 59.999 57.895 3.32 0.00 45.32 5.19
783 888 1.305213 ACCAATCACATGGGTGGCC 60.305 57.895 4.53 0.00 45.18 5.36
786 891 2.582272 CCCACCAATCACATGGGTG 58.418 57.895 10.25 10.25 46.99 4.61
790 895 0.109179 CAACGCCCACCAATCACATG 60.109 55.000 0.00 0.00 0.00 3.21
791 896 1.876497 GCAACGCCCACCAATCACAT 61.876 55.000 0.00 0.00 0.00 3.21
792 897 2.560119 GCAACGCCCACCAATCACA 61.560 57.895 0.00 0.00 0.00 3.58
793 898 2.258286 GCAACGCCCACCAATCAC 59.742 61.111 0.00 0.00 0.00 3.06
794 899 2.115052 AGCAACGCCCACCAATCA 59.885 55.556 0.00 0.00 0.00 2.57
796 901 2.203480 ACAGCAACGCCCACCAAT 60.203 55.556 0.00 0.00 0.00 3.16
797 902 2.904866 GACAGCAACGCCCACCAA 60.905 61.111 0.00 0.00 0.00 3.67
886 1000 4.684134 AAATGGGCCGGCACAGCT 62.684 61.111 37.68 23.89 30.39 4.24
910 1044 0.392327 GGGCTTGAAGAGAGAGTGGC 60.392 60.000 0.00 0.00 0.00 5.01
990 1130 4.529219 TCACCCATAGCTGCGGCG 62.529 66.667 12.87 0.51 44.37 6.46
993 1133 2.590007 GGCTCACCCATAGCTGCG 60.590 66.667 0.00 0.00 39.97 5.18
1238 1450 0.110056 GCATCGCACAAGGAACACAG 60.110 55.000 0.00 0.00 0.00 3.66
1405 1625 7.043565 AGTTTATTGCAGAAAAATGGCATAGG 58.956 34.615 0.00 0.00 37.39 2.57
1435 1655 2.744202 CGGATCTGTTCCAAAAGACCAG 59.256 50.000 5.66 0.00 45.78 4.00
1455 1675 0.738975 TCATGACCGGAGTAAGCTCG 59.261 55.000 9.46 0.00 42.53 5.03
1467 1687 1.255882 TTGTTGGTGGCATCATGACC 58.744 50.000 0.00 0.00 0.00 4.02
1535 1755 8.791355 AAAGCTTGTAAAATTGGTAGTTAACG 57.209 30.769 0.00 0.00 0.00 3.18
1540 1760 7.364970 CGGTTAAAGCTTGTAAAATTGGTAGT 58.635 34.615 0.00 0.00 0.00 2.73
1591 1811 3.528532 GGGTGGTCCAAATTACTACTCG 58.471 50.000 0.00 0.00 35.00 4.18
1626 1846 6.924060 GTCCGCAGTACATAAGTTTCAGATAT 59.076 38.462 0.00 0.00 0.00 1.63
1780 2000 6.434302 TCAAACCCTCAATCCAATGTATGAT 58.566 36.000 0.00 0.00 0.00 2.45
1895 2116 0.625849 GCCCTTCCCTTCATTCCTGA 59.374 55.000 0.00 0.00 0.00 3.86
1900 2121 1.000866 GCCAGCCCTTCCCTTCATT 59.999 57.895 0.00 0.00 0.00 2.57
1902 2123 4.033776 CGCCAGCCCTTCCCTTCA 62.034 66.667 0.00 0.00 0.00 3.02
1971 2192 3.393106 TCTCTGGCCATGCTCGCA 61.393 61.111 5.51 0.00 0.00 5.10
1984 2205 2.593956 GCCCCTTCCCGTTGTCTCT 61.594 63.158 0.00 0.00 0.00 3.10
2001 2222 2.399356 CCTTCCTTTTCTCCCGCGC 61.399 63.158 0.00 0.00 0.00 6.86
2005 2226 2.649190 GCTGATCCTTCCTTTTCTCCC 58.351 52.381 0.00 0.00 0.00 4.30
2012 2233 2.187946 CGCCGCTGATCCTTCCTT 59.812 61.111 0.00 0.00 0.00 3.36
2102 2323 1.304381 GGCACCCAGGCAGATCAAA 60.304 57.895 0.00 0.00 43.51 2.69
2103 2324 2.356278 GGCACCCAGGCAGATCAA 59.644 61.111 0.00 0.00 43.51 2.57
2104 2325 4.100084 CGGCACCCAGGCAGATCA 62.100 66.667 0.00 0.00 44.47 2.92
2114 2335 4.699522 AGAAAGACGGCGGCACCC 62.700 66.667 18.30 2.22 33.26 4.61
2148 2372 1.261238 CCAGCCTCTCTTTCGTCCCT 61.261 60.000 0.00 0.00 0.00 4.20
2240 2464 1.808133 GCCTCTGCCAATACTTCCTCG 60.808 57.143 0.00 0.00 0.00 4.63
2253 2477 2.613133 CTCTGCTTGATTTAGCCTCTGC 59.387 50.000 0.00 0.00 40.49 4.26
2254 2478 3.871485 ACTCTGCTTGATTTAGCCTCTG 58.129 45.455 0.00 0.00 40.49 3.35
2258 2495 4.123506 GGTCTACTCTGCTTGATTTAGCC 58.876 47.826 0.00 0.00 40.49 3.93
2385 2622 6.051717 GGTTTGCTTTGCTAGAGATCTGATA 58.948 40.000 0.00 0.00 0.00 2.15
2444 2681 3.517612 ACCAGTTCAGAACCTAGGCTAA 58.482 45.455 9.30 0.00 0.00 3.09
2522 2759 7.964559 CACTGTATTGTTTGGATGTCTGTATTG 59.035 37.037 0.00 0.00 0.00 1.90
2528 2765 4.985538 ACCACTGTATTGTTTGGATGTCT 58.014 39.130 0.00 0.00 33.02 3.41
2529 2766 5.003804 AGACCACTGTATTGTTTGGATGTC 58.996 41.667 0.00 0.00 33.02 3.06
2532 2769 4.042809 TGGAGACCACTGTATTGTTTGGAT 59.957 41.667 0.00 0.00 33.02 3.41
2533 2770 3.392947 TGGAGACCACTGTATTGTTTGGA 59.607 43.478 0.00 0.00 33.02 3.53
2535 2772 5.964958 ATTGGAGACCACTGTATTGTTTG 57.035 39.130 0.00 0.00 30.78 2.93
2536 2773 6.539173 TGTATTGGAGACCACTGTATTGTTT 58.461 36.000 0.00 0.00 30.78 2.83
2537 2774 6.013725 TCTGTATTGGAGACCACTGTATTGTT 60.014 38.462 0.00 0.00 30.78 2.83
2547 4915 3.449918 TGGATGTCTGTATTGGAGACCA 58.550 45.455 0.00 0.00 39.36 4.02
2552 4920 4.979335 TGTGTTTGGATGTCTGTATTGGA 58.021 39.130 0.00 0.00 0.00 3.53
2597 4965 5.303078 AGGCCTATCACATAGTACAGAACAG 59.697 44.000 1.29 0.00 0.00 3.16
2638 5006 2.024273 AGGAACGGAGGGAGTAGAATGA 60.024 50.000 0.00 0.00 0.00 2.57
2641 5009 3.744940 TTAGGAACGGAGGGAGTAGAA 57.255 47.619 0.00 0.00 0.00 2.10
2644 5012 6.723052 CCTTATATTTAGGAACGGAGGGAGTA 59.277 42.308 0.00 0.00 34.56 2.59
2645 5013 5.543020 CCTTATATTTAGGAACGGAGGGAGT 59.457 44.000 0.00 0.00 34.56 3.85
2646 5014 5.543020 ACCTTATATTTAGGAACGGAGGGAG 59.457 44.000 9.82 0.00 36.58 4.30
2647 5015 5.306160 CACCTTATATTTAGGAACGGAGGGA 59.694 44.000 9.82 0.00 36.58 4.20
2648 5016 5.071384 ACACCTTATATTTAGGAACGGAGGG 59.929 44.000 9.82 0.00 36.58 4.30
2649 5017 6.170846 ACACCTTATATTTAGGAACGGAGG 57.829 41.667 9.82 0.00 36.58 4.30
2670 5038 9.291664 CGGTTGACTTTTTGAAAAACTAATACA 57.708 29.630 0.00 0.00 0.00 2.29
2671 5039 9.292846 ACGGTTGACTTTTTGAAAAACTAATAC 57.707 29.630 0.00 0.00 0.00 1.89
2672 5040 9.857957 AACGGTTGACTTTTTGAAAAACTAATA 57.142 25.926 0.00 0.00 0.00 0.98
2673 5041 8.652463 CAACGGTTGACTTTTTGAAAAACTAAT 58.348 29.630 15.66 0.00 0.00 1.73
2674 5042 7.652507 ACAACGGTTGACTTTTTGAAAAACTAA 59.347 29.630 26.39 0.00 0.00 2.24
2675 5043 7.146648 ACAACGGTTGACTTTTTGAAAAACTA 58.853 30.769 26.39 0.00 0.00 2.24
2676 5044 5.986741 ACAACGGTTGACTTTTTGAAAAACT 59.013 32.000 26.39 0.00 0.00 2.66
2677 5045 6.144886 AGACAACGGTTGACTTTTTGAAAAAC 59.855 34.615 26.39 0.00 31.83 2.43
2678 5046 6.217294 AGACAACGGTTGACTTTTTGAAAAA 58.783 32.000 26.39 2.83 31.83 1.94
2679 5047 5.774630 AGACAACGGTTGACTTTTTGAAAA 58.225 33.333 26.39 0.00 31.83 2.29
2680 5048 5.379732 AGACAACGGTTGACTTTTTGAAA 57.620 34.783 26.39 0.00 31.83 2.69
2681 5049 6.094325 ACATAGACAACGGTTGACTTTTTGAA 59.906 34.615 25.87 11.24 36.98 2.69
2682 5050 5.587043 ACATAGACAACGGTTGACTTTTTGA 59.413 36.000 25.87 11.85 36.98 2.69
2683 5051 5.816919 ACATAGACAACGGTTGACTTTTTG 58.183 37.500 25.87 21.68 36.98 2.44
2684 5052 6.445357 AACATAGACAACGGTTGACTTTTT 57.555 33.333 25.87 15.62 36.98 1.94
2685 5053 6.094325 TCAAACATAGACAACGGTTGACTTTT 59.906 34.615 25.87 18.49 36.98 2.27
2686 5054 5.587043 TCAAACATAGACAACGGTTGACTTT 59.413 36.000 25.87 17.63 36.98 2.66
2687 5055 5.007332 GTCAAACATAGACAACGGTTGACTT 59.993 40.000 25.87 13.88 36.98 3.01
2688 5056 4.510340 GTCAAACATAGACAACGGTTGACT 59.490 41.667 26.39 25.37 39.01 3.41
2689 5057 4.319261 GGTCAAACATAGACAACGGTTGAC 60.319 45.833 26.39 20.02 37.74 3.18
2690 5058 3.810941 GGTCAAACATAGACAACGGTTGA 59.189 43.478 26.39 5.54 37.74 3.18
2691 5059 3.562141 TGGTCAAACATAGACAACGGTTG 59.438 43.478 18.81 18.81 37.74 3.77
2692 5060 3.811083 TGGTCAAACATAGACAACGGTT 58.189 40.909 0.00 0.00 37.74 4.44
2693 5061 3.478857 TGGTCAAACATAGACAACGGT 57.521 42.857 0.00 0.00 37.74 4.83
2694 5062 3.813166 AGTTGGTCAAACATAGACAACGG 59.187 43.478 0.00 0.00 41.61 4.44
2695 5063 5.418310 AAGTTGGTCAAACATAGACAACG 57.582 39.130 0.00 0.00 41.61 4.10
2696 5064 7.699566 TGTAAAGTTGGTCAAACATAGACAAC 58.300 34.615 0.00 0.00 41.61 3.32
2697 5065 7.468084 GCTGTAAAGTTGGTCAAACATAGACAA 60.468 37.037 0.00 0.00 41.61 3.18
2698 5066 6.017440 GCTGTAAAGTTGGTCAAACATAGACA 60.017 38.462 0.00 0.00 41.61 3.41
2699 5067 6.017440 TGCTGTAAAGTTGGTCAAACATAGAC 60.017 38.462 0.00 0.00 41.61 2.59
2700 5068 6.058833 TGCTGTAAAGTTGGTCAAACATAGA 58.941 36.000 0.00 0.00 41.61 1.98
2701 5069 6.312399 TGCTGTAAAGTTGGTCAAACATAG 57.688 37.500 0.00 0.00 41.61 2.23
2702 5070 6.701145 TTGCTGTAAAGTTGGTCAAACATA 57.299 33.333 0.00 0.00 41.61 2.29
2703 5071 5.590530 TTGCTGTAAAGTTGGTCAAACAT 57.409 34.783 0.00 0.00 41.61 2.71
2704 5072 5.392767 TTTGCTGTAAAGTTGGTCAAACA 57.607 34.783 0.00 0.00 41.61 2.83
2705 5073 6.902224 ATTTTGCTGTAAAGTTGGTCAAAC 57.098 33.333 0.00 0.00 39.24 2.93
2825 5193 9.706691 CTCTAAGTTTGACCAAGTTTATAGACA 57.293 33.333 0.00 0.00 30.16 3.41
2826 5194 9.924650 TCTCTAAGTTTGACCAAGTTTATAGAC 57.075 33.333 0.00 0.00 30.16 2.59
2845 5213 9.855021 TTTTCCAAAAAGTCAAACTTCTCTAAG 57.145 29.630 0.00 0.00 37.47 2.18
2871 5239 9.720769 CCGTTCCTCAATATAAGGTGTATTATT 57.279 33.333 4.45 0.00 35.29 1.40
2872 5240 9.096823 TCCGTTCCTCAATATAAGGTGTATTAT 57.903 33.333 4.45 0.00 35.29 1.28
2873 5241 8.481492 TCCGTTCCTCAATATAAGGTGTATTA 57.519 34.615 4.45 0.00 35.29 0.98
2874 5242 7.369551 TCCGTTCCTCAATATAAGGTGTATT 57.630 36.000 4.45 0.00 35.29 1.89
2875 5243 6.014499 CCTCCGTTCCTCAATATAAGGTGTAT 60.014 42.308 4.45 0.00 35.29 2.29
2876 5244 5.303589 CCTCCGTTCCTCAATATAAGGTGTA 59.696 44.000 4.45 0.00 35.29 2.90
2877 5245 4.101119 CCTCCGTTCCTCAATATAAGGTGT 59.899 45.833 4.45 0.00 35.29 4.16
2878 5246 4.503296 CCCTCCGTTCCTCAATATAAGGTG 60.503 50.000 4.45 0.00 35.29 4.00
2879 5247 3.646637 CCCTCCGTTCCTCAATATAAGGT 59.353 47.826 4.45 0.00 35.29 3.50
2880 5248 3.901844 TCCCTCCGTTCCTCAATATAAGG 59.098 47.826 0.00 0.00 35.05 2.69
2881 5249 4.589374 ACTCCCTCCGTTCCTCAATATAAG 59.411 45.833 0.00 0.00 0.00 1.73
2882 5250 4.553678 ACTCCCTCCGTTCCTCAATATAA 58.446 43.478 0.00 0.00 0.00 0.98
2883 5251 4.194678 ACTCCCTCCGTTCCTCAATATA 57.805 45.455 0.00 0.00 0.00 0.86
2884 5252 3.047695 ACTCCCTCCGTTCCTCAATAT 57.952 47.619 0.00 0.00 0.00 1.28
2885 5253 2.544844 ACTCCCTCCGTTCCTCAATA 57.455 50.000 0.00 0.00 0.00 1.90
2886 5254 2.108970 GTACTCCCTCCGTTCCTCAAT 58.891 52.381 0.00 0.00 0.00 2.57
2887 5255 1.076677 AGTACTCCCTCCGTTCCTCAA 59.923 52.381 0.00 0.00 0.00 3.02
2888 5256 0.702902 AGTACTCCCTCCGTTCCTCA 59.297 55.000 0.00 0.00 0.00 3.86
2889 5257 2.725221 TAGTACTCCCTCCGTTCCTC 57.275 55.000 0.00 0.00 0.00 3.71
2890 5258 3.684408 ATTAGTACTCCCTCCGTTCCT 57.316 47.619 0.00 0.00 0.00 3.36
2891 5259 4.261952 GCTAATTAGTACTCCCTCCGTTCC 60.262 50.000 13.91 0.00 0.00 3.62
2892 5260 4.583907 AGCTAATTAGTACTCCCTCCGTTC 59.416 45.833 13.91 0.00 0.00 3.95
2893 5261 4.544683 AGCTAATTAGTACTCCCTCCGTT 58.455 43.478 13.91 0.00 0.00 4.44
2894 5262 4.143543 GAGCTAATTAGTACTCCCTCCGT 58.856 47.826 13.91 0.00 0.00 4.69
2895 5263 3.188873 CGAGCTAATTAGTACTCCCTCCG 59.811 52.174 13.91 4.44 0.00 4.63
2896 5264 3.506844 CCGAGCTAATTAGTACTCCCTCC 59.493 52.174 13.91 0.00 0.00 4.30
2897 5265 4.143543 ACCGAGCTAATTAGTACTCCCTC 58.856 47.826 13.91 9.28 0.00 4.30
2898 5266 4.143543 GACCGAGCTAATTAGTACTCCCT 58.856 47.826 13.91 1.39 0.00 4.20
2899 5267 3.255395 GGACCGAGCTAATTAGTACTCCC 59.745 52.174 13.91 6.33 0.00 4.30
2900 5268 3.058363 CGGACCGAGCTAATTAGTACTCC 60.058 52.174 8.64 9.58 0.00 3.85
2901 5269 3.058363 CCGGACCGAGCTAATTAGTACTC 60.058 52.174 17.49 11.16 0.00 2.59
2902 5270 2.883386 CCGGACCGAGCTAATTAGTACT 59.117 50.000 17.49 0.00 0.00 2.73
2903 5271 2.880890 TCCGGACCGAGCTAATTAGTAC 59.119 50.000 17.49 7.48 0.00 2.73
2904 5272 3.213206 TCCGGACCGAGCTAATTAGTA 57.787 47.619 17.49 0.00 0.00 1.82
2987 5378 8.818860 TCTAGTATTGCTTTACCTACCTTTCAA 58.181 33.333 0.00 0.00 0.00 2.69
2994 5385 7.224167 ACGCATTTCTAGTATTGCTTTACCTAC 59.776 37.037 12.49 0.00 32.97 3.18
3095 5486 8.677870 ATCTGTAGCCTCCTTCTAATATCATT 57.322 34.615 0.00 0.00 0.00 2.57
3109 5500 4.987912 GCAAATGTCTAGATCTGTAGCCTC 59.012 45.833 5.18 0.00 0.00 4.70
3306 5711 1.699634 AGCCCGACCTTATGCATGTAT 59.300 47.619 10.16 0.82 0.00 2.29
3325 5730 2.859273 AAGGACCGCGATTCAGGCAG 62.859 60.000 8.23 0.00 0.00 4.85
3486 5892 0.391263 CTTCGTACTGAGCCCCCAAC 60.391 60.000 0.00 0.00 0.00 3.77
3624 6044 5.353956 AGTTGCCCAAAAGAAACATTTTGTC 59.646 36.000 10.13 3.89 44.85 3.18
3850 6312 6.191657 TGCATCCTTAGTTCCATATGACAT 57.808 37.500 3.65 0.00 0.00 3.06
3851 6313 5.628797 TGCATCCTTAGTTCCATATGACA 57.371 39.130 3.65 0.00 0.00 3.58
3852 6314 6.000219 ACATGCATCCTTAGTTCCATATGAC 59.000 40.000 3.65 0.00 0.00 3.06
3853 6315 5.999600 CACATGCATCCTTAGTTCCATATGA 59.000 40.000 3.65 0.00 0.00 2.15
3854 6316 5.999600 TCACATGCATCCTTAGTTCCATATG 59.000 40.000 0.00 0.00 0.00 1.78
3855 6317 6.000219 GTCACATGCATCCTTAGTTCCATAT 59.000 40.000 0.00 0.00 0.00 1.78
3856 6318 5.368145 GTCACATGCATCCTTAGTTCCATA 58.632 41.667 0.00 0.00 0.00 2.74
3857 6319 4.202441 GTCACATGCATCCTTAGTTCCAT 58.798 43.478 0.00 0.00 0.00 3.41
3858 6320 3.609853 GTCACATGCATCCTTAGTTCCA 58.390 45.455 0.00 0.00 0.00 3.53
3859 6321 2.945668 GGTCACATGCATCCTTAGTTCC 59.054 50.000 0.00 0.00 0.00 3.62
3860 6322 3.878778 AGGTCACATGCATCCTTAGTTC 58.121 45.455 0.00 0.00 0.00 3.01
3861 6323 5.104360 ACATAGGTCACATGCATCCTTAGTT 60.104 40.000 9.75 0.00 0.00 2.24
3942 6404 6.307776 TCGTCTATCCTCTTCTCCACATATT 58.692 40.000 0.00 0.00 0.00 1.28
3943 6405 5.882040 TCGTCTATCCTCTTCTCCACATAT 58.118 41.667 0.00 0.00 0.00 1.78
3944 6406 5.306114 TCGTCTATCCTCTTCTCCACATA 57.694 43.478 0.00 0.00 0.00 2.29
3945 6407 4.171878 TCGTCTATCCTCTTCTCCACAT 57.828 45.455 0.00 0.00 0.00 3.21
3946 6408 3.646736 TCGTCTATCCTCTTCTCCACA 57.353 47.619 0.00 0.00 0.00 4.17
3947 6409 3.886505 ACATCGTCTATCCTCTTCTCCAC 59.113 47.826 0.00 0.00 0.00 4.02
3948 6410 4.138290 GACATCGTCTATCCTCTTCTCCA 58.862 47.826 0.00 0.00 0.00 3.86
3949 6411 4.215399 CAGACATCGTCTATCCTCTTCTCC 59.785 50.000 0.00 0.00 41.37 3.71
3950 6412 4.819630 ACAGACATCGTCTATCCTCTTCTC 59.180 45.833 0.00 0.00 41.37 2.87
3951 6413 4.787551 ACAGACATCGTCTATCCTCTTCT 58.212 43.478 0.00 0.00 41.37 2.85
3952 6414 4.819630 AGACAGACATCGTCTATCCTCTTC 59.180 45.833 0.00 0.00 41.37 2.87
3953 6415 4.578516 CAGACAGACATCGTCTATCCTCTT 59.421 45.833 0.00 0.00 41.37 2.85
3954 6416 4.133820 CAGACAGACATCGTCTATCCTCT 58.866 47.826 0.00 0.00 41.37 3.69
3955 6417 3.880490 ACAGACAGACATCGTCTATCCTC 59.120 47.826 0.00 0.00 41.37 3.71
3956 6418 3.880490 GACAGACAGACATCGTCTATCCT 59.120 47.826 0.00 0.00 41.37 3.24
3957 6419 3.880490 AGACAGACAGACATCGTCTATCC 59.120 47.826 0.00 0.00 41.37 2.59
3958 6420 5.295787 AGAAGACAGACAGACATCGTCTATC 59.704 44.000 0.00 0.00 41.37 2.08
3959 6421 5.189928 AGAAGACAGACAGACATCGTCTAT 58.810 41.667 0.00 0.00 41.37 1.98
3960 6422 4.580868 AGAAGACAGACAGACATCGTCTA 58.419 43.478 0.00 0.00 41.37 2.59
3990 6470 7.283354 CGGCAGATAGATGGAACTAGTATATCA 59.717 40.741 0.00 0.00 0.00 2.15
4002 6589 1.188219 GGCTCCGGCAGATAGATGGA 61.188 60.000 0.00 0.00 40.87 3.41
4073 6675 5.583061 TCGATTGTCACCCACATAACATAAC 59.417 40.000 0.00 0.00 33.90 1.89
4103 6705 6.528423 GCATCACACCATAATCTCGATAGTAC 59.472 42.308 0.00 0.00 37.40 2.73
4110 6712 4.122046 TGAAGCATCACACCATAATCTCG 58.878 43.478 0.00 0.00 0.00 4.04
4178 6782 2.910199 TCTGTATTGCTCATCTGCACC 58.090 47.619 0.00 0.00 43.20 5.01
4239 7092 1.741770 AGCATTGCCGTTCCTCGAC 60.742 57.895 4.70 0.00 42.86 4.20
4275 7165 3.452786 CGAGCCGGAAGCCTCAGA 61.453 66.667 5.05 0.00 45.47 3.27
4300 7199 2.967615 GCTCAAGGATACGGCCGC 60.968 66.667 28.58 9.25 46.39 6.53
4307 7206 1.675714 CGGTGTTGCTGCTCAAGGATA 60.676 52.381 0.00 0.00 34.91 2.59
4330 7229 0.251121 TGAGACGTACCCCACCGTAA 60.251 55.000 0.00 0.00 37.44 3.18
4331 7230 0.251121 TTGAGACGTACCCCACCGTA 60.251 55.000 0.00 0.00 37.44 4.02
4332 7231 1.114722 TTTGAGACGTACCCCACCGT 61.115 55.000 0.00 0.00 40.54 4.83
4336 7235 3.495434 AATGTTTTGAGACGTACCCCA 57.505 42.857 0.00 0.00 0.00 4.96
4337 7236 3.373130 GCTAATGTTTTGAGACGTACCCC 59.627 47.826 0.00 0.00 0.00 4.95
4362 7261 2.203800 TTCGAGGTGATACATGCGTC 57.796 50.000 0.00 0.00 0.00 5.19
4413 7358 4.051922 CACGCCTACATCTTAATCTCACC 58.948 47.826 0.00 0.00 0.00 4.02
4492 7476 2.284190 GGTAAGCTTGTGAGATCTGCC 58.716 52.381 9.86 0.00 0.00 4.85
4507 7491 6.127310 ACTGTGGCTAGTCTAAGATTGGTAAG 60.127 42.308 0.00 0.00 0.00 2.34
4512 7496 4.437239 CCACTGTGGCTAGTCTAAGATTG 58.563 47.826 14.87 0.00 0.00 2.67
4513 7497 3.452627 CCCACTGTGGCTAGTCTAAGATT 59.547 47.826 21.47 0.00 35.79 2.40
4514 7498 3.034635 CCCACTGTGGCTAGTCTAAGAT 58.965 50.000 21.47 0.00 35.79 2.40
4515 7499 2.042569 TCCCACTGTGGCTAGTCTAAGA 59.957 50.000 21.47 6.91 35.79 2.10
4516 7500 2.428890 CTCCCACTGTGGCTAGTCTAAG 59.571 54.545 21.47 4.54 35.79 2.18
4517 7501 2.225293 ACTCCCACTGTGGCTAGTCTAA 60.225 50.000 21.47 0.00 35.79 2.10
4518 7502 1.358103 ACTCCCACTGTGGCTAGTCTA 59.642 52.381 21.47 0.00 35.79 2.59
4519 7503 0.115349 ACTCCCACTGTGGCTAGTCT 59.885 55.000 21.47 3.44 35.79 3.24
4520 7504 1.848652 TACTCCCACTGTGGCTAGTC 58.151 55.000 26.56 0.00 35.79 2.59
4521 7505 1.900486 GTTACTCCCACTGTGGCTAGT 59.100 52.381 26.22 26.22 35.79 2.57
4522 7506 2.180276 AGTTACTCCCACTGTGGCTAG 58.820 52.381 21.47 20.51 35.79 3.42
4523 7507 2.320681 AGTTACTCCCACTGTGGCTA 57.679 50.000 21.47 10.31 35.79 3.93
4524 7508 1.348036 GAAGTTACTCCCACTGTGGCT 59.652 52.381 21.47 8.83 35.79 4.75
4525 7509 1.071699 TGAAGTTACTCCCACTGTGGC 59.928 52.381 21.47 6.54 35.79 5.01
4526 7510 2.368875 ACTGAAGTTACTCCCACTGTGG 59.631 50.000 20.01 20.01 37.25 4.17
4527 7511 3.753294 ACTGAAGTTACTCCCACTGTG 57.247 47.619 0.00 0.00 0.00 3.66
4528 7512 4.481072 ACTACTGAAGTTACTCCCACTGT 58.519 43.478 0.00 0.00 33.35 3.55
4529 7513 6.015688 TGTTACTACTGAAGTTACTCCCACTG 60.016 42.308 0.00 0.00 38.33 3.66
4530 7514 6.073314 TGTTACTACTGAAGTTACTCCCACT 58.927 40.000 0.00 0.00 38.33 4.00
4531 7515 6.336842 TGTTACTACTGAAGTTACTCCCAC 57.663 41.667 0.00 0.00 38.33 4.61
4532 7516 6.127814 CGATGTTACTACTGAAGTTACTCCCA 60.128 42.308 0.00 0.00 38.33 4.37
4533 7517 6.094603 TCGATGTTACTACTGAAGTTACTCCC 59.905 42.308 0.00 0.00 38.33 4.30
4534 7518 7.081526 TCGATGTTACTACTGAAGTTACTCC 57.918 40.000 0.00 0.00 38.33 3.85
4535 7519 7.750769 ACTCGATGTTACTACTGAAGTTACTC 58.249 38.462 0.00 0.00 38.33 2.59
4536 7520 7.148272 GGACTCGATGTTACTACTGAAGTTACT 60.148 40.741 0.00 0.00 38.33 2.24
4537 7521 6.966066 GGACTCGATGTTACTACTGAAGTTAC 59.034 42.308 0.00 0.00 39.80 2.50
4538 7522 6.656270 TGGACTCGATGTTACTACTGAAGTTA 59.344 38.462 0.00 0.00 39.80 2.24
4539 7523 5.475909 TGGACTCGATGTTACTACTGAAGTT 59.524 40.000 0.00 0.00 39.80 2.66
4540 7524 5.008331 TGGACTCGATGTTACTACTGAAGT 58.992 41.667 0.00 0.00 42.62 3.01
4541 7525 5.562506 TGGACTCGATGTTACTACTGAAG 57.437 43.478 0.00 0.00 0.00 3.02
4542 7526 5.475909 AGTTGGACTCGATGTTACTACTGAA 59.524 40.000 0.00 0.00 0.00 3.02
4543 7527 5.008331 AGTTGGACTCGATGTTACTACTGA 58.992 41.667 0.00 0.00 0.00 3.41
4544 7528 5.312120 AGTTGGACTCGATGTTACTACTG 57.688 43.478 0.00 0.00 0.00 2.74
4545 7529 5.564048 GAGTTGGACTCGATGTTACTACT 57.436 43.478 0.00 0.00 35.28 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.