Multiple sequence alignment - TraesCS1B01G428300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G428300 chr1B 100.000 3125 0 0 1 3125 653488569 653485445 0.000000e+00 5771.0
1 TraesCS1B01G428300 chr1B 80.537 1490 215 47 742 2189 653324084 653322628 0.000000e+00 1075.0
2 TraesCS1B01G428300 chr1B 81.026 1170 195 19 982 2130 653835320 653836483 0.000000e+00 905.0
3 TraesCS1B01G428300 chr1B 80.316 1204 184 36 942 2130 653527515 653526350 0.000000e+00 861.0
4 TraesCS1B01G428300 chr1B 86.124 418 47 5 1827 2242 653313155 653312747 1.030000e-119 440.0
5 TraesCS1B01G428300 chr1B 79.368 601 109 10 1530 2126 653826097 653826686 2.900000e-110 409.0
6 TraesCS1B01G428300 chr1B 83.990 381 46 7 1951 2317 653265437 653265058 4.960000e-93 351.0
7 TraesCS1B01G428300 chr1B 80.260 385 72 4 24 406 642709940 642709558 1.420000e-73 287.0
8 TraesCS1B01G428300 chr1B 89.474 171 18 0 1 171 616338576 616338746 1.890000e-52 217.0
9 TraesCS1B01G428300 chr1B 89.017 173 17 2 1 172 672845831 672846002 2.440000e-51 213.0
10 TraesCS1B01G428300 chr1B 84.146 164 20 4 2228 2390 653322633 653322475 1.500000e-33 154.0
11 TraesCS1B01G428300 chr1B 87.000 100 9 3 2455 2550 653322458 653322359 3.300000e-20 110.0
12 TraesCS1B01G428300 chr1A 82.879 1431 211 21 982 2400 564131541 564130133 0.000000e+00 1254.0
13 TraesCS1B01G428300 chr1A 79.754 1220 206 19 943 2130 564140961 564139751 0.000000e+00 846.0
14 TraesCS1B01G428300 chr1A 85.598 736 91 11 1418 2141 563800682 563801414 0.000000e+00 758.0
15 TraesCS1B01G428300 chr1A 84.520 562 51 18 2585 3125 564129836 564129290 9.930000e-145 523.0
16 TraesCS1B01G428300 chr1A 79.387 587 100 12 1551 2131 564147566 564146995 8.120000e-106 394.0
17 TraesCS1B01G428300 chr1A 77.821 514 89 13 991 1493 564118782 564118283 8.480000e-76 294.0
18 TraesCS1B01G428300 chr1A 89.756 205 17 3 2387 2588 564130114 564129911 3.090000e-65 259.0
19 TraesCS1B01G428300 chr1A 83.871 93 15 0 2498 2590 564127570 564127478 4.290000e-14 89.8
20 TraesCS1B01G428300 chr1D 78.365 1382 250 36 936 2291 460598517 460597159 0.000000e+00 850.0
21 TraesCS1B01G428300 chr1D 84.791 789 104 8 990 1765 470532212 470531427 0.000000e+00 778.0
22 TraesCS1B01G428300 chr1D 77.798 1081 185 28 982 2043 470537239 470536195 1.590000e-172 616.0
23 TraesCS1B01G428300 chr4D 90.931 408 36 1 1 407 445348580 445348987 5.890000e-152 547.0
24 TraesCS1B01G428300 chr7B 89.409 406 42 1 1 406 79030887 79030483 7.730000e-141 510.0
25 TraesCS1B01G428300 chr2D 90.052 382 36 2 26 406 315480981 315481361 7.790000e-136 494.0
26 TraesCS1B01G428300 chr3B 88.235 408 45 3 1 408 216973120 216972716 4.690000e-133 484.0
27 TraesCS1B01G428300 chr3B 87.222 360 41 4 51 409 173241872 173242227 3.750000e-109 405.0
28 TraesCS1B01G428300 chr3B 86.154 65 9 0 1421 1485 774125624 774125688 1.550000e-08 71.3
29 TraesCS1B01G428300 chr3B 87.097 62 5 2 1438 1499 735131219 735131161 2.010000e-07 67.6
30 TraesCS1B01G428300 chr7D 87.469 407 45 6 1 406 203174450 203174049 6.100000e-127 464.0
31 TraesCS1B01G428300 chr7D 87.984 258 30 1 149 406 167579242 167578986 1.410000e-78 303.0
32 TraesCS1B01G428300 chr3D 90.763 249 23 0 158 406 388536025 388535777 1.800000e-87 333.0
33 TraesCS1B01G428300 chr3A 91.667 48 4 0 1438 1485 714728375 714728422 2.010000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G428300 chr1B 653485445 653488569 3124 True 5771.000000 5771 100.000000 1 3125 1 chr1B.!!$R4 3124
1 TraesCS1B01G428300 chr1B 653835320 653836483 1163 False 905.000000 905 81.026000 982 2130 1 chr1B.!!$F3 1148
2 TraesCS1B01G428300 chr1B 653526350 653527515 1165 True 861.000000 861 80.316000 942 2130 1 chr1B.!!$R5 1188
3 TraesCS1B01G428300 chr1B 653322359 653324084 1725 True 446.333333 1075 83.894333 742 2550 3 chr1B.!!$R6 1808
4 TraesCS1B01G428300 chr1B 653826097 653826686 589 False 409.000000 409 79.368000 1530 2126 1 chr1B.!!$F2 596
5 TraesCS1B01G428300 chr1A 564139751 564140961 1210 True 846.000000 846 79.754000 943 2130 1 chr1A.!!$R2 1187
6 TraesCS1B01G428300 chr1A 563800682 563801414 732 False 758.000000 758 85.598000 1418 2141 1 chr1A.!!$F1 723
7 TraesCS1B01G428300 chr1A 564127478 564131541 4063 True 531.450000 1254 85.256500 982 3125 4 chr1A.!!$R4 2143
8 TraesCS1B01G428300 chr1A 564146995 564147566 571 True 394.000000 394 79.387000 1551 2131 1 chr1A.!!$R3 580
9 TraesCS1B01G428300 chr1D 460597159 460598517 1358 True 850.000000 850 78.365000 936 2291 1 chr1D.!!$R1 1355
10 TraesCS1B01G428300 chr1D 470531427 470537239 5812 True 697.000000 778 81.294500 982 2043 2 chr1D.!!$R2 1061

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
144 145 0.097674 GGCGCTGCACATTAGAAGTG 59.902 55.0 7.64 0.0 39.92 3.16 F
1804 1919 0.031616 AGAGATGGAGGTGGAGGGAC 60.032 60.0 0.00 0.0 0.00 4.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1825 1940 0.036164 TGTCGCAGCCATGTAACCTT 59.964 50.0 0.0 0.0 0.0 3.50 R
2664 2903 0.179070 GGCCTTGGACGATTCTCCTC 60.179 60.0 0.0 0.0 0.0 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.516195 GGAAGAGAGGACGGCCGC 62.516 72.222 28.58 18.35 39.96 6.53
18 19 3.760035 GAAGAGAGGACGGCCGCA 61.760 66.667 28.58 0.00 39.96 5.69
19 20 3.296709 GAAGAGAGGACGGCCGCAA 62.297 63.158 28.58 0.00 39.96 4.85
20 21 3.302347 AAGAGAGGACGGCCGCAAG 62.302 63.158 28.58 0.00 39.96 4.01
32 33 2.956987 CGCAAGGCTCAGGGTTTG 59.043 61.111 0.00 0.00 0.00 2.93
33 34 2.629656 CGCAAGGCTCAGGGTTTGG 61.630 63.158 0.00 0.00 0.00 3.28
34 35 2.278330 GCAAGGCTCAGGGTTTGGG 61.278 63.158 0.00 0.00 0.00 4.12
35 36 1.153756 CAAGGCTCAGGGTTTGGGT 59.846 57.895 0.00 0.00 0.00 4.51
36 37 1.153756 AAGGCTCAGGGTTTGGGTG 59.846 57.895 0.00 0.00 0.00 4.61
37 38 2.283173 GGCTCAGGGTTTGGGTGG 60.283 66.667 0.00 0.00 0.00 4.61
38 39 2.283173 GCTCAGGGTTTGGGTGGG 60.283 66.667 0.00 0.00 0.00 4.61
39 40 2.440599 CTCAGGGTTTGGGTGGGG 59.559 66.667 0.00 0.00 0.00 4.96
40 41 2.370403 TCAGGGTTTGGGTGGGGT 60.370 61.111 0.00 0.00 0.00 4.95
41 42 2.203625 CAGGGTTTGGGTGGGGTG 60.204 66.667 0.00 0.00 0.00 4.61
42 43 3.517497 AGGGTTTGGGTGGGGTGG 61.517 66.667 0.00 0.00 0.00 4.61
43 44 4.631740 GGGTTTGGGTGGGGTGGG 62.632 72.222 0.00 0.00 0.00 4.61
44 45 4.631740 GGTTTGGGTGGGGTGGGG 62.632 72.222 0.00 0.00 0.00 4.96
45 46 4.631740 GTTTGGGTGGGGTGGGGG 62.632 72.222 0.00 0.00 0.00 5.40
50 51 3.840132 GGTGGGGTGGGGGTGTTT 61.840 66.667 0.00 0.00 0.00 2.83
51 52 2.523168 GTGGGGTGGGGGTGTTTG 60.523 66.667 0.00 0.00 0.00 2.93
52 53 3.838913 TGGGGTGGGGGTGTTTGG 61.839 66.667 0.00 0.00 0.00 3.28
53 54 4.631740 GGGGTGGGGGTGTTTGGG 62.632 72.222 0.00 0.00 0.00 4.12
54 55 4.631740 GGGTGGGGGTGTTTGGGG 62.632 72.222 0.00 0.00 0.00 4.96
55 56 3.840132 GGTGGGGGTGTTTGGGGT 61.840 66.667 0.00 0.00 0.00 4.95
56 57 2.523168 GTGGGGGTGTTTGGGGTG 60.523 66.667 0.00 0.00 0.00 4.61
57 58 3.838913 TGGGGGTGTTTGGGGTGG 61.839 66.667 0.00 0.00 0.00 4.61
58 59 4.631740 GGGGGTGTTTGGGGTGGG 62.632 72.222 0.00 0.00 0.00 4.61
59 60 4.631740 GGGGTGTTTGGGGTGGGG 62.632 72.222 0.00 0.00 0.00 4.96
60 61 4.631740 GGGTGTTTGGGGTGGGGG 62.632 72.222 0.00 0.00 0.00 5.40
61 62 3.840132 GGTGTTTGGGGTGGGGGT 61.840 66.667 0.00 0.00 0.00 4.95
62 63 2.523168 GTGTTTGGGGTGGGGGTG 60.523 66.667 0.00 0.00 0.00 4.61
63 64 3.838913 TGTTTGGGGTGGGGGTGG 61.839 66.667 0.00 0.00 0.00 4.61
64 65 4.631740 GTTTGGGGTGGGGGTGGG 62.632 72.222 0.00 0.00 0.00 4.61
65 66 4.885449 TTTGGGGTGGGGGTGGGA 62.885 66.667 0.00 0.00 0.00 4.37
73 74 4.825679 GGGGGTGGGAGGGGAGAG 62.826 77.778 0.00 0.00 0.00 3.20
74 75 3.695825 GGGGTGGGAGGGGAGAGA 61.696 72.222 0.00 0.00 0.00 3.10
75 76 2.041405 GGGTGGGAGGGGAGAGAG 60.041 72.222 0.00 0.00 0.00 3.20
76 77 2.637640 GGGTGGGAGGGGAGAGAGA 61.638 68.421 0.00 0.00 0.00 3.10
77 78 1.075600 GGTGGGAGGGGAGAGAGAG 60.076 68.421 0.00 0.00 0.00 3.20
78 79 1.700985 GTGGGAGGGGAGAGAGAGT 59.299 63.158 0.00 0.00 0.00 3.24
79 80 0.686112 GTGGGAGGGGAGAGAGAGTG 60.686 65.000 0.00 0.00 0.00 3.51
80 81 1.075600 GGGAGGGGAGAGAGAGTGG 60.076 68.421 0.00 0.00 0.00 4.00
81 82 1.075600 GGAGGGGAGAGAGAGTGGG 60.076 68.421 0.00 0.00 0.00 4.61
82 83 1.075600 GAGGGGAGAGAGAGTGGGG 60.076 68.421 0.00 0.00 0.00 4.96
83 84 2.766229 GGGGAGAGAGAGTGGGGC 60.766 72.222 0.00 0.00 0.00 5.80
84 85 2.766229 GGGAGAGAGAGTGGGGCC 60.766 72.222 0.00 0.00 0.00 5.80
85 86 2.039624 GGAGAGAGAGTGGGGCCA 59.960 66.667 4.39 0.00 0.00 5.36
86 87 2.063378 GGAGAGAGAGTGGGGCCAG 61.063 68.421 4.39 0.00 0.00 4.85
87 88 2.686835 AGAGAGAGTGGGGCCAGC 60.687 66.667 4.39 0.00 0.00 4.85
88 89 3.791586 GAGAGAGTGGGGCCAGCC 61.792 72.222 4.39 0.00 0.00 4.85
89 90 4.345286 AGAGAGTGGGGCCAGCCT 62.345 66.667 4.39 0.00 36.10 4.58
90 91 2.365635 GAGAGTGGGGCCAGCCTA 60.366 66.667 4.39 0.00 36.10 3.93
91 92 1.995626 GAGAGTGGGGCCAGCCTAA 60.996 63.158 4.39 0.00 36.10 2.69
92 93 1.977293 GAGAGTGGGGCCAGCCTAAG 61.977 65.000 4.39 0.00 36.10 2.18
93 94 2.204151 AGTGGGGCCAGCCTAAGT 60.204 61.111 4.39 0.00 36.10 2.24
94 95 2.044946 GTGGGGCCAGCCTAAGTG 60.045 66.667 4.39 0.00 36.10 3.16
95 96 2.204074 TGGGGCCAGCCTAAGTGA 60.204 61.111 4.39 0.00 36.10 3.41
96 97 2.272471 GGGGCCAGCCTAAGTGAC 59.728 66.667 4.39 0.00 36.10 3.67
97 98 2.602676 GGGGCCAGCCTAAGTGACA 61.603 63.158 4.39 0.00 36.10 3.58
98 99 1.378762 GGGCCAGCCTAAGTGACAA 59.621 57.895 4.39 0.00 36.10 3.18
99 100 0.251165 GGGCCAGCCTAAGTGACAAA 60.251 55.000 4.39 0.00 36.10 2.83
100 101 0.881796 GGCCAGCCTAAGTGACAAAC 59.118 55.000 0.00 0.00 0.00 2.93
101 102 1.604604 GCCAGCCTAAGTGACAAACA 58.395 50.000 0.00 0.00 0.00 2.83
102 103 1.537202 GCCAGCCTAAGTGACAAACAG 59.463 52.381 0.00 0.00 0.00 3.16
103 104 2.810400 GCCAGCCTAAGTGACAAACAGA 60.810 50.000 0.00 0.00 0.00 3.41
104 105 2.808543 CCAGCCTAAGTGACAAACAGAC 59.191 50.000 0.00 0.00 0.00 3.51
105 106 3.495100 CCAGCCTAAGTGACAAACAGACT 60.495 47.826 0.00 0.00 0.00 3.24
106 107 3.496130 CAGCCTAAGTGACAAACAGACTG 59.504 47.826 0.00 0.00 0.00 3.51
107 108 3.134804 AGCCTAAGTGACAAACAGACTGT 59.865 43.478 1.07 1.07 0.00 3.55
108 109 3.248602 GCCTAAGTGACAAACAGACTGTG 59.751 47.826 9.33 0.00 0.00 3.66
109 110 3.248602 CCTAAGTGACAAACAGACTGTGC 59.751 47.826 9.33 0.20 0.00 4.57
110 111 2.401583 AGTGACAAACAGACTGTGCA 57.598 45.000 9.33 2.91 0.00 4.57
111 112 2.923121 AGTGACAAACAGACTGTGCAT 58.077 42.857 9.33 0.00 0.00 3.96
112 113 2.874701 AGTGACAAACAGACTGTGCATC 59.125 45.455 9.33 7.50 0.00 3.91
113 114 1.866601 TGACAAACAGACTGTGCATCG 59.133 47.619 9.33 0.00 0.00 3.84
114 115 0.588252 ACAAACAGACTGTGCATCGC 59.412 50.000 9.33 0.00 0.00 4.58
115 116 0.110056 CAAACAGACTGTGCATCGCC 60.110 55.000 9.33 0.00 0.00 5.54
116 117 0.250467 AAACAGACTGTGCATCGCCT 60.250 50.000 9.33 0.00 0.00 5.52
117 118 0.608130 AACAGACTGTGCATCGCCTA 59.392 50.000 9.33 0.00 0.00 3.93
118 119 0.608130 ACAGACTGTGCATCGCCTAA 59.392 50.000 7.47 0.00 0.00 2.69
119 120 1.284657 CAGACTGTGCATCGCCTAAG 58.715 55.000 0.00 0.00 0.00 2.18
120 121 0.176680 AGACTGTGCATCGCCTAAGG 59.823 55.000 0.00 0.00 0.00 2.69
121 122 0.175760 GACTGTGCATCGCCTAAGGA 59.824 55.000 0.00 0.00 0.00 3.36
122 123 0.613260 ACTGTGCATCGCCTAAGGAA 59.387 50.000 0.00 0.00 0.00 3.36
123 124 1.009829 CTGTGCATCGCCTAAGGAAC 58.990 55.000 0.00 0.00 0.00 3.62
124 125 0.392461 TGTGCATCGCCTAAGGAACC 60.392 55.000 0.00 0.00 0.00 3.62
125 126 1.153449 TGCATCGCCTAAGGAACCG 60.153 57.895 0.00 0.00 0.00 4.44
126 127 1.887707 GCATCGCCTAAGGAACCGG 60.888 63.158 0.00 0.00 0.00 5.28
127 128 1.887707 CATCGCCTAAGGAACCGGC 60.888 63.158 0.00 0.00 40.40 6.13
130 131 4.468689 GCCTAAGGAACCGGCGCT 62.469 66.667 7.64 0.00 33.64 5.92
131 132 2.511600 CCTAAGGAACCGGCGCTG 60.512 66.667 9.96 9.96 0.00 5.18
132 133 3.195698 CTAAGGAACCGGCGCTGC 61.196 66.667 11.81 0.00 0.00 5.25
133 134 3.950794 CTAAGGAACCGGCGCTGCA 62.951 63.158 11.81 0.00 0.00 4.41
137 138 3.737172 GAACCGGCGCTGCACATT 61.737 61.111 11.81 1.53 0.00 2.71
138 139 2.359354 AACCGGCGCTGCACATTA 60.359 55.556 11.81 0.00 0.00 1.90
139 140 2.309764 GAACCGGCGCTGCACATTAG 62.310 60.000 11.81 0.00 0.00 1.73
140 141 2.511373 CCGGCGCTGCACATTAGA 60.511 61.111 11.81 0.00 0.00 2.10
141 142 2.106074 CCGGCGCTGCACATTAGAA 61.106 57.895 11.81 0.00 0.00 2.10
142 143 1.349627 CGGCGCTGCACATTAGAAG 59.650 57.895 7.64 0.00 0.00 2.85
143 144 1.361668 CGGCGCTGCACATTAGAAGT 61.362 55.000 7.64 0.00 0.00 3.01
144 145 0.097674 GGCGCTGCACATTAGAAGTG 59.902 55.000 7.64 0.00 39.92 3.16
145 146 0.798776 GCGCTGCACATTAGAAGTGT 59.201 50.000 0.00 0.00 39.17 3.55
152 153 1.710013 ACATTAGAAGTGTGACGCCG 58.290 50.000 0.00 0.00 0.00 6.46
153 154 1.271379 ACATTAGAAGTGTGACGCCGA 59.729 47.619 0.00 0.00 0.00 5.54
154 155 2.094182 ACATTAGAAGTGTGACGCCGAT 60.094 45.455 0.00 0.00 0.00 4.18
155 156 1.990799 TTAGAAGTGTGACGCCGATG 58.009 50.000 0.00 0.00 0.00 3.84
156 157 0.457853 TAGAAGTGTGACGCCGATGC 60.458 55.000 0.00 0.00 0.00 3.91
157 158 2.740714 GAAGTGTGACGCCGATGCC 61.741 63.158 0.00 0.00 0.00 4.40
158 159 4.760047 AGTGTGACGCCGATGCCC 62.760 66.667 0.00 0.00 0.00 5.36
159 160 4.760047 GTGTGACGCCGATGCCCT 62.760 66.667 0.00 0.00 0.00 5.19
160 161 3.071837 TGTGACGCCGATGCCCTA 61.072 61.111 0.00 0.00 0.00 3.53
161 162 2.279517 GTGACGCCGATGCCCTAG 60.280 66.667 0.00 0.00 0.00 3.02
162 163 2.441348 TGACGCCGATGCCCTAGA 60.441 61.111 0.00 0.00 0.00 2.43
163 164 2.027751 GACGCCGATGCCCTAGAC 59.972 66.667 0.00 0.00 0.00 2.59
164 165 3.825833 GACGCCGATGCCCTAGACG 62.826 68.421 0.00 0.00 0.00 4.18
166 167 3.917760 GCCGATGCCCTAGACGCT 61.918 66.667 0.00 0.00 0.00 5.07
167 168 2.028190 CCGATGCCCTAGACGCTG 59.972 66.667 0.00 0.00 0.00 5.18
168 169 2.659897 CGATGCCCTAGACGCTGC 60.660 66.667 0.00 0.00 0.00 5.25
169 170 2.501128 GATGCCCTAGACGCTGCA 59.499 61.111 0.00 0.00 38.23 4.41
170 171 1.884926 GATGCCCTAGACGCTGCAC 60.885 63.158 0.00 0.00 36.41 4.57
171 172 2.578163 GATGCCCTAGACGCTGCACA 62.578 60.000 0.00 0.00 36.41 4.57
172 173 1.976132 ATGCCCTAGACGCTGCACAT 61.976 55.000 0.00 0.00 36.41 3.21
173 174 1.450312 GCCCTAGACGCTGCACATT 60.450 57.895 0.00 0.00 0.00 2.71
174 175 0.179084 GCCCTAGACGCTGCACATTA 60.179 55.000 0.00 0.00 0.00 1.90
175 176 1.571919 CCCTAGACGCTGCACATTAC 58.428 55.000 0.00 0.00 0.00 1.89
176 177 1.134818 CCCTAGACGCTGCACATTACA 60.135 52.381 0.00 0.00 0.00 2.41
177 178 2.616960 CCTAGACGCTGCACATTACAA 58.383 47.619 0.00 0.00 0.00 2.41
178 179 2.604914 CCTAGACGCTGCACATTACAAG 59.395 50.000 0.00 0.00 0.00 3.16
179 180 2.169832 AGACGCTGCACATTACAAGT 57.830 45.000 0.00 0.00 0.00 3.16
180 181 1.800586 AGACGCTGCACATTACAAGTG 59.199 47.619 0.00 0.00 39.92 3.16
181 182 1.531149 GACGCTGCACATTACAAGTGT 59.469 47.619 0.00 0.00 39.17 3.55
188 189 2.543777 ACATTACAAGTGTGACGCCT 57.456 45.000 0.00 0.00 0.00 5.52
189 190 3.671008 ACATTACAAGTGTGACGCCTA 57.329 42.857 0.00 0.00 0.00 3.93
190 191 4.202245 ACATTACAAGTGTGACGCCTAT 57.798 40.909 0.00 0.00 0.00 2.57
191 192 3.932710 ACATTACAAGTGTGACGCCTATG 59.067 43.478 0.00 0.00 0.00 2.23
192 193 2.004583 TACAAGTGTGACGCCTATGC 57.995 50.000 0.00 0.00 0.00 3.14
270 271 3.183259 GGCATGCGACGCCTAAAA 58.817 55.556 18.69 0.00 46.56 1.52
271 272 1.226295 GGCATGCGACGCCTAAAAC 60.226 57.895 18.69 0.57 46.56 2.43
272 273 1.499949 GCATGCGACGCCTAAAACA 59.500 52.632 18.69 0.00 0.00 2.83
273 274 0.109964 GCATGCGACGCCTAAAACAA 60.110 50.000 18.69 0.00 0.00 2.83
274 275 1.602191 CATGCGACGCCTAAAACAAC 58.398 50.000 18.69 0.00 0.00 3.32
275 276 0.165079 ATGCGACGCCTAAAACAACG 59.835 50.000 18.69 0.00 0.00 4.10
276 277 0.875040 TGCGACGCCTAAAACAACGA 60.875 50.000 18.69 0.00 0.00 3.85
277 278 0.449993 GCGACGCCTAAAACAACGAC 60.450 55.000 9.14 0.00 0.00 4.34
278 279 0.179292 CGACGCCTAAAACAACGACG 60.179 55.000 0.00 0.00 37.35 5.12
279 280 0.449993 GACGCCTAAAACAACGACGC 60.450 55.000 0.00 0.00 0.00 5.19
280 281 0.877213 ACGCCTAAAACAACGACGCT 60.877 50.000 0.00 0.00 0.00 5.07
281 282 0.450482 CGCCTAAAACAACGACGCTG 60.450 55.000 0.00 0.00 0.00 5.18
282 283 0.724785 GCCTAAAACAACGACGCTGC 60.725 55.000 0.00 0.00 0.00 5.25
283 284 0.584396 CCTAAAACAACGACGCTGCA 59.416 50.000 0.00 0.00 0.00 4.41
284 285 1.196808 CCTAAAACAACGACGCTGCAT 59.803 47.619 0.00 0.00 0.00 3.96
285 286 2.233355 CTAAAACAACGACGCTGCATG 58.767 47.619 0.00 0.00 0.00 4.06
286 287 0.317770 AAAACAACGACGCTGCATGG 60.318 50.000 0.00 0.00 0.00 3.66
287 288 1.444119 AAACAACGACGCTGCATGGT 61.444 50.000 0.00 0.00 0.00 3.55
288 289 2.116736 AACAACGACGCTGCATGGTG 62.117 55.000 0.00 0.00 0.00 4.17
289 290 3.726517 AACGACGCTGCATGGTGC 61.727 61.111 0.00 0.00 45.29 5.01
322 323 4.858680 TGTCGGGCGCCACACAAA 62.859 61.111 30.85 5.83 0.00 2.83
323 324 3.587933 GTCGGGCGCCACACAAAA 61.588 61.111 30.85 1.26 0.00 2.44
324 325 3.587933 TCGGGCGCCACACAAAAC 61.588 61.111 30.85 6.91 0.00 2.43
325 326 4.973360 CGGGCGCCACACAAAACG 62.973 66.667 30.85 16.19 0.00 3.60
326 327 4.639171 GGGCGCCACACAAAACGG 62.639 66.667 30.85 0.00 0.00 4.44
327 328 3.894947 GGCGCCACACAAAACGGT 61.895 61.111 24.80 0.00 0.00 4.83
328 329 2.353030 GCGCCACACAAAACGGTC 60.353 61.111 0.00 0.00 0.00 4.79
329 330 2.830285 GCGCCACACAAAACGGTCT 61.830 57.895 0.00 0.00 0.00 3.85
330 331 1.010125 CGCCACACAAAACGGTCTG 60.010 57.895 0.00 0.00 0.00 3.51
331 332 1.711060 CGCCACACAAAACGGTCTGT 61.711 55.000 0.00 0.00 0.00 3.41
332 333 0.454196 GCCACACAAAACGGTCTGTT 59.546 50.000 0.00 0.00 44.59 3.16
333 334 1.671845 GCCACACAAAACGGTCTGTTA 59.328 47.619 0.00 0.00 40.84 2.41
334 335 2.292292 GCCACACAAAACGGTCTGTTAT 59.708 45.455 0.00 0.00 40.84 1.89
335 336 3.851838 GCCACACAAAACGGTCTGTTATG 60.852 47.826 0.00 0.19 40.84 1.90
336 337 3.314080 CCACACAAAACGGTCTGTTATGT 59.686 43.478 0.00 0.80 40.84 2.29
337 338 4.278858 CACACAAAACGGTCTGTTATGTG 58.721 43.478 16.24 16.24 40.84 3.21
338 339 4.034626 CACACAAAACGGTCTGTTATGTGA 59.965 41.667 21.24 0.00 44.15 3.58
339 340 4.636648 ACACAAAACGGTCTGTTATGTGAA 59.363 37.500 9.69 0.00 40.84 3.18
340 341 5.124138 ACACAAAACGGTCTGTTATGTGAAA 59.876 36.000 9.69 0.00 40.84 2.69
341 342 6.030849 CACAAAACGGTCTGTTATGTGAAAA 58.969 36.000 0.00 0.00 40.84 2.29
342 343 6.528423 CACAAAACGGTCTGTTATGTGAAAAA 59.472 34.615 0.00 0.00 40.84 1.94
364 365 6.743575 AAATTTCAAGACCAGGTTAGATCG 57.256 37.500 0.00 0.00 0.00 3.69
365 366 4.884668 TTTCAAGACCAGGTTAGATCGT 57.115 40.909 0.00 0.00 0.00 3.73
366 367 3.868757 TCAAGACCAGGTTAGATCGTG 57.131 47.619 0.00 0.00 0.00 4.35
367 368 3.427573 TCAAGACCAGGTTAGATCGTGA 58.572 45.455 0.00 0.00 0.00 4.35
368 369 3.830178 TCAAGACCAGGTTAGATCGTGAA 59.170 43.478 0.00 0.00 28.61 3.18
369 370 4.466370 TCAAGACCAGGTTAGATCGTGAAT 59.534 41.667 0.00 0.00 28.61 2.57
370 371 5.046591 TCAAGACCAGGTTAGATCGTGAATT 60.047 40.000 0.00 0.00 28.61 2.17
371 372 4.759782 AGACCAGGTTAGATCGTGAATTG 58.240 43.478 0.00 0.00 0.00 2.32
372 373 4.466370 AGACCAGGTTAGATCGTGAATTGA 59.534 41.667 0.00 0.00 0.00 2.57
373 374 5.129485 AGACCAGGTTAGATCGTGAATTGAT 59.871 40.000 0.00 0.00 0.00 2.57
374 375 5.745227 ACCAGGTTAGATCGTGAATTGATT 58.255 37.500 0.00 0.00 0.00 2.57
375 376 6.180472 ACCAGGTTAGATCGTGAATTGATTT 58.820 36.000 0.00 0.00 0.00 2.17
376 377 6.316390 ACCAGGTTAGATCGTGAATTGATTTC 59.684 38.462 0.00 0.00 34.72 2.17
377 378 6.316140 CCAGGTTAGATCGTGAATTGATTTCA 59.684 38.462 0.00 0.00 42.09 2.69
378 379 7.012704 CCAGGTTAGATCGTGAATTGATTTCAT 59.987 37.037 0.00 0.00 45.77 2.57
379 380 8.066595 CAGGTTAGATCGTGAATTGATTTCATC 58.933 37.037 0.00 0.00 45.77 2.92
380 381 7.227512 AGGTTAGATCGTGAATTGATTTCATCC 59.772 37.037 0.00 0.00 45.77 3.51
381 382 7.227512 GGTTAGATCGTGAATTGATTTCATCCT 59.772 37.037 0.00 0.00 45.77 3.24
382 383 6.857777 AGATCGTGAATTGATTTCATCCTC 57.142 37.500 0.00 0.00 45.77 3.71
383 384 6.351711 AGATCGTGAATTGATTTCATCCTCA 58.648 36.000 0.00 0.00 45.77 3.86
384 385 6.482641 AGATCGTGAATTGATTTCATCCTCAG 59.517 38.462 0.00 0.00 45.77 3.35
385 386 4.877823 TCGTGAATTGATTTCATCCTCAGG 59.122 41.667 0.00 0.00 45.77 3.86
386 387 4.637534 CGTGAATTGATTTCATCCTCAGGT 59.362 41.667 0.00 0.00 45.77 4.00
387 388 5.220739 CGTGAATTGATTTCATCCTCAGGTC 60.221 44.000 0.00 0.00 45.77 3.85
388 389 5.649395 GTGAATTGATTTCATCCTCAGGTCA 59.351 40.000 0.00 0.00 45.77 4.02
389 390 6.151648 GTGAATTGATTTCATCCTCAGGTCAA 59.848 38.462 0.00 0.00 45.77 3.18
390 391 6.720748 TGAATTGATTTCATCCTCAGGTCAAA 59.279 34.615 0.00 0.00 39.44 2.69
391 392 7.398047 TGAATTGATTTCATCCTCAGGTCAAAT 59.602 33.333 0.00 0.00 39.44 2.32
392 393 8.827832 AATTGATTTCATCCTCAGGTCAAATA 57.172 30.769 0.00 0.00 0.00 1.40
393 394 9.430399 AATTGATTTCATCCTCAGGTCAAATAT 57.570 29.630 0.00 0.00 0.00 1.28
394 395 7.812690 TGATTTCATCCTCAGGTCAAATATG 57.187 36.000 0.00 0.00 0.00 1.78
395 396 6.263842 TGATTTCATCCTCAGGTCAAATATGC 59.736 38.462 0.00 0.00 0.00 3.14
396 397 3.732212 TCATCCTCAGGTCAAATATGCG 58.268 45.455 0.00 0.00 0.00 4.73
397 398 3.134623 TCATCCTCAGGTCAAATATGCGT 59.865 43.478 0.00 0.00 0.00 5.24
398 399 3.627395 TCCTCAGGTCAAATATGCGTT 57.373 42.857 0.00 0.00 0.00 4.84
399 400 3.950397 TCCTCAGGTCAAATATGCGTTT 58.050 40.909 0.00 0.00 0.00 3.60
400 401 4.331968 TCCTCAGGTCAAATATGCGTTTT 58.668 39.130 0.00 0.00 0.00 2.43
401 402 4.394920 TCCTCAGGTCAAATATGCGTTTTC 59.605 41.667 0.00 0.00 0.00 2.29
402 403 4.396166 CCTCAGGTCAAATATGCGTTTTCT 59.604 41.667 0.00 0.00 0.00 2.52
403 404 5.295431 TCAGGTCAAATATGCGTTTTCTG 57.705 39.130 0.00 0.00 0.00 3.02
404 405 3.853671 CAGGTCAAATATGCGTTTTCTGC 59.146 43.478 0.00 0.00 0.00 4.26
405 406 3.119495 AGGTCAAATATGCGTTTTCTGCC 60.119 43.478 0.00 0.00 0.00 4.85
406 407 3.366883 GGTCAAATATGCGTTTTCTGCCA 60.367 43.478 0.00 0.00 0.00 4.92
407 408 3.853671 GTCAAATATGCGTTTTCTGCCAG 59.146 43.478 0.00 0.00 0.00 4.85
408 409 3.755905 TCAAATATGCGTTTTCTGCCAGA 59.244 39.130 0.00 0.00 0.00 3.86
409 410 4.100529 CAAATATGCGTTTTCTGCCAGAG 58.899 43.478 0.00 0.00 0.00 3.35
410 411 2.472695 TATGCGTTTTCTGCCAGAGT 57.527 45.000 0.00 0.00 0.00 3.24
411 412 0.877071 ATGCGTTTTCTGCCAGAGTG 59.123 50.000 0.00 0.00 0.00 3.51
412 413 1.165907 TGCGTTTTCTGCCAGAGTGG 61.166 55.000 0.00 0.00 41.55 4.00
413 414 1.166531 GCGTTTTCTGCCAGAGTGGT 61.167 55.000 0.00 0.00 40.46 4.16
414 415 1.876416 GCGTTTTCTGCCAGAGTGGTA 60.876 52.381 0.00 0.00 40.46 3.25
415 416 1.798813 CGTTTTCTGCCAGAGTGGTAC 59.201 52.381 0.00 0.00 40.46 3.34
416 417 2.805295 CGTTTTCTGCCAGAGTGGTACA 60.805 50.000 0.00 0.00 40.46 2.90
417 418 3.412386 GTTTTCTGCCAGAGTGGTACAT 58.588 45.455 0.00 0.00 44.52 2.29
418 419 4.575885 GTTTTCTGCCAGAGTGGTACATA 58.424 43.478 0.00 0.00 44.52 2.29
419 420 5.186198 GTTTTCTGCCAGAGTGGTACATAT 58.814 41.667 0.00 0.00 44.52 1.78
420 421 6.346096 GTTTTCTGCCAGAGTGGTACATATA 58.654 40.000 0.00 0.00 44.52 0.86
421 422 5.791336 TTCTGCCAGAGTGGTACATATAG 57.209 43.478 0.00 0.00 44.52 1.31
422 423 4.152647 TCTGCCAGAGTGGTACATATAGG 58.847 47.826 0.00 0.00 44.52 2.57
423 424 3.898123 CTGCCAGAGTGGTACATATAGGT 59.102 47.826 0.00 0.00 44.52 3.08
424 425 4.295201 TGCCAGAGTGGTACATATAGGTT 58.705 43.478 0.00 0.00 44.52 3.50
425 426 4.719773 TGCCAGAGTGGTACATATAGGTTT 59.280 41.667 0.00 0.00 44.52 3.27
426 427 5.190925 TGCCAGAGTGGTACATATAGGTTTT 59.809 40.000 0.00 0.00 44.52 2.43
427 428 5.758784 GCCAGAGTGGTACATATAGGTTTTC 59.241 44.000 0.00 0.00 44.52 2.29
428 429 6.408206 GCCAGAGTGGTACATATAGGTTTTCT 60.408 42.308 0.00 0.00 44.52 2.52
429 430 7.565680 CCAGAGTGGTACATATAGGTTTTCTT 58.434 38.462 0.00 0.00 44.52 2.52
430 431 8.701895 CCAGAGTGGTACATATAGGTTTTCTTA 58.298 37.037 0.00 0.00 44.52 2.10
453 454 9.953825 CTTAAATAAACTTTATCTATAGGCGCG 57.046 33.333 0.00 0.00 0.00 6.86
454 455 6.963049 AATAAACTTTATCTATAGGCGCGG 57.037 37.500 8.83 0.00 0.00 6.46
455 456 2.365408 ACTTTATCTATAGGCGCGGC 57.635 50.000 27.06 27.06 0.00 6.53
470 471 4.284550 GGCCTCCTTGCACCACCA 62.285 66.667 0.00 0.00 0.00 4.17
471 472 2.674380 GCCTCCTTGCACCACCAG 60.674 66.667 0.00 0.00 0.00 4.00
472 473 3.160585 CCTCCTTGCACCACCAGA 58.839 61.111 0.00 0.00 0.00 3.86
473 474 1.687612 CCTCCTTGCACCACCAGAT 59.312 57.895 0.00 0.00 0.00 2.90
474 475 0.679002 CCTCCTTGCACCACCAGATG 60.679 60.000 0.00 0.00 0.00 2.90
475 476 1.303561 TCCTTGCACCACCAGATGC 60.304 57.895 0.00 0.00 42.40 3.91
476 477 1.303888 CCTTGCACCACCAGATGCT 60.304 57.895 0.00 0.00 42.55 3.79
477 478 1.592400 CCTTGCACCACCAGATGCTG 61.592 60.000 0.00 0.00 42.55 4.41
478 479 2.209064 CTTGCACCACCAGATGCTGC 62.209 60.000 0.00 0.00 42.55 5.25
479 480 3.446570 GCACCACCAGATGCTGCC 61.447 66.667 0.00 0.00 38.84 4.85
480 481 2.353958 CACCACCAGATGCTGCCT 59.646 61.111 0.00 0.00 0.00 4.75
481 482 2.044555 CACCACCAGATGCTGCCTG 61.045 63.158 0.00 0.00 0.00 4.85
482 483 3.138798 CCACCAGATGCTGCCTGC 61.139 66.667 0.00 0.00 43.25 4.85
483 484 3.506096 CACCAGATGCTGCCTGCG 61.506 66.667 0.00 0.00 46.63 5.18
484 485 4.025858 ACCAGATGCTGCCTGCGT 62.026 61.111 0.00 0.00 46.63 5.24
485 486 3.506096 CCAGATGCTGCCTGCGTG 61.506 66.667 0.00 0.00 46.63 5.34
486 487 2.745100 CAGATGCTGCCTGCGTGT 60.745 61.111 0.00 0.00 46.63 4.49
487 488 2.745100 AGATGCTGCCTGCGTGTG 60.745 61.111 0.00 0.00 46.63 3.82
488 489 3.807538 GATGCTGCCTGCGTGTGG 61.808 66.667 0.00 0.00 46.63 4.17
489 490 4.648626 ATGCTGCCTGCGTGTGGT 62.649 61.111 0.00 0.00 46.63 4.16
492 493 4.969196 CTGCCTGCGTGTGGTCGT 62.969 66.667 0.00 0.00 0.00 4.34
493 494 3.567478 CTGCCTGCGTGTGGTCGTA 62.567 63.158 0.00 0.00 0.00 3.43
494 495 2.809601 GCCTGCGTGTGGTCGTAG 60.810 66.667 0.00 0.00 41.67 3.51
496 497 2.649034 CTGCGTGTGGTCGTAGGT 59.351 61.111 0.00 0.00 39.22 3.08
497 498 1.733041 CTGCGTGTGGTCGTAGGTG 60.733 63.158 0.00 0.00 39.22 4.00
498 499 3.110178 GCGTGTGGTCGTAGGTGC 61.110 66.667 0.00 0.00 0.00 5.01
499 500 2.337170 CGTGTGGTCGTAGGTGCA 59.663 61.111 0.00 0.00 0.00 4.57
500 501 1.080093 CGTGTGGTCGTAGGTGCAT 60.080 57.895 0.00 0.00 0.00 3.96
501 502 1.351430 CGTGTGGTCGTAGGTGCATG 61.351 60.000 0.00 0.00 0.00 4.06
502 503 1.375396 TGTGGTCGTAGGTGCATGC 60.375 57.895 11.82 11.82 0.00 4.06
503 504 2.106683 GTGGTCGTAGGTGCATGCC 61.107 63.158 16.68 6.42 0.00 4.40
504 505 2.267642 GGTCGTAGGTGCATGCCA 59.732 61.111 16.68 0.00 0.00 4.92
505 506 1.153168 GGTCGTAGGTGCATGCCAT 60.153 57.895 16.68 6.90 0.00 4.40
506 507 1.160329 GGTCGTAGGTGCATGCCATC 61.160 60.000 16.68 3.63 0.00 3.51
507 508 0.461870 GTCGTAGGTGCATGCCATCA 60.462 55.000 16.68 0.00 0.00 3.07
508 509 0.251634 TCGTAGGTGCATGCCATCAA 59.748 50.000 16.68 0.00 0.00 2.57
509 510 1.134128 TCGTAGGTGCATGCCATCAAT 60.134 47.619 16.68 0.00 0.00 2.57
510 511 2.103941 TCGTAGGTGCATGCCATCAATA 59.896 45.455 16.68 0.00 0.00 1.90
511 512 3.076621 CGTAGGTGCATGCCATCAATAT 58.923 45.455 16.68 0.00 0.00 1.28
512 513 3.120095 CGTAGGTGCATGCCATCAATATG 60.120 47.826 16.68 1.69 0.00 1.78
513 514 3.232720 AGGTGCATGCCATCAATATGA 57.767 42.857 16.68 0.00 34.84 2.15
514 515 2.889045 AGGTGCATGCCATCAATATGAC 59.111 45.455 16.68 1.81 34.84 3.06
515 516 2.351060 GGTGCATGCCATCAATATGACG 60.351 50.000 16.68 0.00 34.84 4.35
516 517 2.549329 GTGCATGCCATCAATATGACGA 59.451 45.455 16.68 0.00 34.84 4.20
517 518 3.003585 GTGCATGCCATCAATATGACGAA 59.996 43.478 16.68 0.00 34.84 3.85
518 519 3.822167 TGCATGCCATCAATATGACGAAT 59.178 39.130 16.68 0.00 34.84 3.34
519 520 4.083164 TGCATGCCATCAATATGACGAATC 60.083 41.667 16.68 0.00 34.84 2.52
520 521 4.083164 GCATGCCATCAATATGACGAATCA 60.083 41.667 6.36 0.00 39.83 2.57
521 522 5.563280 GCATGCCATCAATATGACGAATCAA 60.563 40.000 6.36 0.00 38.69 2.57
522 523 6.440436 CATGCCATCAATATGACGAATCAAA 58.560 36.000 0.00 0.00 38.69 2.69
523 524 6.448207 TGCCATCAATATGACGAATCAAAA 57.552 33.333 0.00 0.00 38.69 2.44
524 525 7.041635 TGCCATCAATATGACGAATCAAAAT 57.958 32.000 0.00 0.00 38.69 1.82
525 526 7.140705 TGCCATCAATATGACGAATCAAAATC 58.859 34.615 0.00 0.00 38.69 2.17
526 527 7.140705 GCCATCAATATGACGAATCAAAATCA 58.859 34.615 0.00 0.00 38.69 2.57
527 528 7.648908 GCCATCAATATGACGAATCAAAATCAA 59.351 33.333 0.00 0.00 38.69 2.57
528 529 9.518906 CCATCAATATGACGAATCAAAATCAAA 57.481 29.630 0.00 0.00 38.69 2.69
537 538 9.473640 TGACGAATCAAAATCAAAATTGAATCA 57.526 25.926 0.00 0.00 41.13 2.57
585 586 6.679327 AAAGGATATTTACTCTTCCGTTGC 57.321 37.500 0.00 0.00 30.35 4.17
586 587 5.353394 AGGATATTTACTCTTCCGTTGCA 57.647 39.130 0.00 0.00 33.35 4.08
587 588 5.741011 AGGATATTTACTCTTCCGTTGCAA 58.259 37.500 0.00 0.00 33.35 4.08
588 589 5.585047 AGGATATTTACTCTTCCGTTGCAAC 59.415 40.000 19.89 19.89 33.35 4.17
589 590 5.220796 GGATATTTACTCTTCCGTTGCAACC 60.221 44.000 23.42 6.48 0.00 3.77
590 591 2.922740 TTACTCTTCCGTTGCAACCT 57.077 45.000 23.42 0.71 0.00 3.50
591 592 2.163818 TACTCTTCCGTTGCAACCTG 57.836 50.000 23.42 14.85 0.00 4.00
592 593 1.166531 ACTCTTCCGTTGCAACCTGC 61.167 55.000 23.42 0.00 45.29 4.85
593 594 1.856265 CTCTTCCGTTGCAACCTGCC 61.856 60.000 23.42 0.00 44.23 4.85
594 595 3.254014 CTTCCGTTGCAACCTGCCG 62.254 63.158 23.42 11.49 44.23 5.69
598 599 3.683937 GTTGCAACCTGCCGGCAT 61.684 61.111 32.87 14.47 44.23 4.40
599 600 3.682885 TTGCAACCTGCCGGCATG 61.683 61.111 32.87 29.92 44.23 4.06
600 601 4.972733 TGCAACCTGCCGGCATGT 62.973 61.111 32.87 30.70 44.23 3.21
601 602 3.683937 GCAACCTGCCGGCATGTT 61.684 61.111 35.42 35.42 37.42 2.71
602 603 3.050339 CAACCTGCCGGCATGTTT 58.950 55.556 37.55 24.69 33.65 2.83
603 604 1.373246 CAACCTGCCGGCATGTTTG 60.373 57.895 37.55 29.83 33.65 2.93
635 636 4.051932 AAAAACGGTTTGGGCCCA 57.948 50.000 24.45 24.45 0.00 5.36
636 637 2.297937 AAAAACGGTTTGGGCCCAA 58.702 47.368 34.07 34.07 0.00 4.12
637 638 0.618981 AAAAACGGTTTGGGCCCAAA 59.381 45.000 40.46 40.46 42.77 3.28
638 639 0.618981 AAAACGGTTTGGGCCCAAAA 59.381 45.000 44.15 28.35 45.86 2.44
639 640 0.107606 AAACGGTTTGGGCCCAAAAC 60.108 50.000 43.54 43.54 46.70 2.43
642 643 2.217106 GGTTTGGGCCCAAAACTGT 58.783 52.632 44.92 0.00 46.66 3.55
643 644 0.544223 GGTTTGGGCCCAAAACTGTT 59.456 50.000 44.92 0.00 46.66 3.16
644 645 1.662517 GTTTGGGCCCAAAACTGTTG 58.337 50.000 44.15 0.00 45.86 3.33
645 646 1.208293 GTTTGGGCCCAAAACTGTTGA 59.792 47.619 44.15 23.05 45.86 3.18
646 647 1.799933 TTGGGCCCAAAACTGTTGAT 58.200 45.000 35.47 0.00 32.44 2.57
647 648 1.799933 TGGGCCCAAAACTGTTGATT 58.200 45.000 26.33 0.00 0.00 2.57
648 649 2.964209 TGGGCCCAAAACTGTTGATTA 58.036 42.857 26.33 0.00 0.00 1.75
649 650 3.309296 TGGGCCCAAAACTGTTGATTAA 58.691 40.909 26.33 0.00 0.00 1.40
650 651 3.711704 TGGGCCCAAAACTGTTGATTAAA 59.288 39.130 26.33 0.00 0.00 1.52
651 652 4.164221 TGGGCCCAAAACTGTTGATTAAAA 59.836 37.500 26.33 0.00 0.00 1.52
652 653 5.126779 GGGCCCAAAACTGTTGATTAAAAA 58.873 37.500 19.95 0.00 0.00 1.94
669 670 2.452006 AAAAGACACAAACAGTCGCG 57.548 45.000 0.00 0.00 40.84 5.87
670 671 1.365699 AAAGACACAAACAGTCGCGT 58.634 45.000 5.77 0.00 40.84 6.01
671 672 0.650512 AAGACACAAACAGTCGCGTG 59.349 50.000 5.77 0.00 40.84 5.34
672 673 1.151777 AGACACAAACAGTCGCGTGG 61.152 55.000 5.77 0.00 40.84 4.94
673 674 2.101209 GACACAAACAGTCGCGTGGG 62.101 60.000 5.77 0.00 33.62 4.61
674 675 3.276846 ACAAACAGTCGCGTGGGC 61.277 61.111 5.77 0.00 0.00 5.36
675 676 4.025401 CAAACAGTCGCGTGGGCC 62.025 66.667 5.77 0.00 35.02 5.80
718 719 5.890424 GGTACCTCTATGCTCTATCTCAC 57.110 47.826 4.06 0.00 0.00 3.51
719 720 4.703093 GGTACCTCTATGCTCTATCTCACC 59.297 50.000 4.06 0.00 0.00 4.02
720 721 3.417101 ACCTCTATGCTCTATCTCACCG 58.583 50.000 0.00 0.00 0.00 4.94
721 722 2.163412 CCTCTATGCTCTATCTCACCGC 59.837 54.545 0.00 0.00 0.00 5.68
722 723 2.163412 CTCTATGCTCTATCTCACCGCC 59.837 54.545 0.00 0.00 0.00 6.13
723 724 0.881796 TATGCTCTATCTCACCGCCG 59.118 55.000 0.00 0.00 0.00 6.46
724 725 2.355244 GCTCTATCTCACCGCCGC 60.355 66.667 0.00 0.00 0.00 6.53
725 726 2.336809 CTCTATCTCACCGCCGCC 59.663 66.667 0.00 0.00 0.00 6.13
726 727 3.544167 CTCTATCTCACCGCCGCCG 62.544 68.421 0.00 0.00 0.00 6.46
745 746 4.060667 CCCCACCGCCAAATCCCT 62.061 66.667 0.00 0.00 0.00 4.20
746 747 2.685534 CCCCACCGCCAAATCCCTA 61.686 63.158 0.00 0.00 0.00 3.53
747 748 1.152963 CCCACCGCCAAATCCCTAG 60.153 63.158 0.00 0.00 0.00 3.02
748 749 1.607612 CCACCGCCAAATCCCTAGT 59.392 57.895 0.00 0.00 0.00 2.57
749 750 0.463833 CCACCGCCAAATCCCTAGTC 60.464 60.000 0.00 0.00 0.00 2.59
750 751 0.541863 CACCGCCAAATCCCTAGTCT 59.458 55.000 0.00 0.00 0.00 3.24
751 752 0.831307 ACCGCCAAATCCCTAGTCTC 59.169 55.000 0.00 0.00 0.00 3.36
752 753 0.830648 CCGCCAAATCCCTAGTCTCA 59.169 55.000 0.00 0.00 0.00 3.27
753 754 1.473434 CCGCCAAATCCCTAGTCTCAC 60.473 57.143 0.00 0.00 0.00 3.51
754 755 1.802880 CGCCAAATCCCTAGTCTCACG 60.803 57.143 0.00 0.00 0.00 4.35
755 756 1.941325 CCAAATCCCTAGTCTCACGC 58.059 55.000 0.00 0.00 0.00 5.34
756 757 1.482593 CCAAATCCCTAGTCTCACGCT 59.517 52.381 0.00 0.00 0.00 5.07
757 758 2.482142 CCAAATCCCTAGTCTCACGCTC 60.482 54.545 0.00 0.00 0.00 5.03
760 761 1.076632 CCCTAGTCTCACGCTCCCT 60.077 63.158 0.00 0.00 0.00 4.20
784 785 4.528039 CCGCCATCCCCAATGCCT 62.528 66.667 0.00 0.00 33.71 4.75
786 787 2.522680 GCCATCCCCAATGCCTCC 60.523 66.667 0.00 0.00 33.71 4.30
787 788 3.078843 GCCATCCCCAATGCCTCCT 62.079 63.158 0.00 0.00 33.71 3.69
789 790 1.648302 CCATCCCCAATGCCTCCTCA 61.648 60.000 0.00 0.00 33.71 3.86
796 797 1.982395 AATGCCTCCTCACCGTCGA 60.982 57.895 0.00 0.00 0.00 4.20
829 830 4.549516 GCCTCGCCGTAGACGACC 62.550 72.222 3.07 0.00 43.02 4.79
876 879 2.044650 CCGTCGACCACTCCCCTA 60.045 66.667 10.58 0.00 0.00 3.53
877 880 2.413142 CCGTCGACCACTCCCCTAC 61.413 68.421 10.58 0.00 0.00 3.18
878 881 2.413142 CGTCGACCACTCCCCTACC 61.413 68.421 10.58 0.00 0.00 3.18
879 882 2.056815 GTCGACCACTCCCCTACCC 61.057 68.421 3.51 0.00 0.00 3.69
880 883 2.762875 CGACCACTCCCCTACCCC 60.763 72.222 0.00 0.00 0.00 4.95
881 884 2.762875 GACCACTCCCCTACCCCG 60.763 72.222 0.00 0.00 0.00 5.73
883 886 4.798682 CCACTCCCCTACCCCGCT 62.799 72.222 0.00 0.00 0.00 5.52
884 887 3.155167 CACTCCCCTACCCCGCTC 61.155 72.222 0.00 0.00 0.00 5.03
885 888 3.357082 ACTCCCCTACCCCGCTCT 61.357 66.667 0.00 0.00 0.00 4.09
886 889 2.522193 CTCCCCTACCCCGCTCTC 60.522 72.222 0.00 0.00 0.00 3.20
887 890 4.153330 TCCCCTACCCCGCTCTCC 62.153 72.222 0.00 0.00 0.00 3.71
890 893 4.475444 CCTACCCCGCTCTCCCCA 62.475 72.222 0.00 0.00 0.00 4.96
911 914 4.735132 CCGACTCGCCTGCCGAAA 62.735 66.667 0.00 0.00 46.81 3.46
914 917 3.909258 GACTCGCCTGCCGAAACGA 62.909 63.158 0.00 0.00 46.81 3.85
936 939 3.053896 CCGTTCCCCCAAGCGAAC 61.054 66.667 0.00 0.00 35.97 3.95
938 941 2.281276 GTTCCCCCAAGCGAACGT 60.281 61.111 0.00 0.00 29.96 3.99
939 942 2.031465 TTCCCCCAAGCGAACGTC 59.969 61.111 0.00 0.00 0.00 4.34
941 954 2.032071 CCCCCAAGCGAACGTCTT 59.968 61.111 0.00 0.00 0.00 3.01
979 1008 2.357836 CCCCTGCTGCTCCACATT 59.642 61.111 0.00 0.00 0.00 2.71
1003 1058 1.945394 ACAAGATCGCAGGAATCATGC 59.055 47.619 10.11 10.11 40.35 4.06
1051 1109 4.722700 GCCGACTGGTGCACCCAT 62.723 66.667 32.62 20.76 44.15 4.00
1078 1136 1.129811 CGGAGTCGGCAATGTTTTACC 59.870 52.381 0.00 0.00 0.00 2.85
1080 1138 2.433436 GAGTCGGCAATGTTTTACCCT 58.567 47.619 0.00 0.00 0.00 4.34
1128 1195 1.423541 TGGTATCACCTGCTTGTGGTT 59.576 47.619 6.38 0.00 39.58 3.67
1155 1222 0.693049 ACTCCCGCATCAAAGACCTT 59.307 50.000 0.00 0.00 0.00 3.50
1177 1244 5.519183 TCCCAATGGAAAGAGAATCAAGA 57.481 39.130 0.00 0.00 37.86 3.02
1178 1245 5.256474 TCCCAATGGAAAGAGAATCAAGAC 58.744 41.667 0.00 0.00 37.86 3.01
1180 1247 4.095483 CCAATGGAAAGAGAATCAAGACCG 59.905 45.833 0.00 0.00 37.82 4.79
1221 1288 3.950395 GCTATCAATGGGCTCTGAAGTTT 59.050 43.478 0.00 0.00 0.00 2.66
1256 1323 1.500474 CTCCTGGAGGATGCTGGTTA 58.500 55.000 16.19 0.00 45.66 2.85
1260 1327 2.092212 CCTGGAGGATGCTGGTTACATT 60.092 50.000 0.00 0.00 40.64 2.71
1268 1335 5.539955 AGGATGCTGGTTACATTTCTGTTTT 59.460 36.000 0.00 0.00 36.79 2.43
1274 1341 7.491048 TGCTGGTTACATTTCTGTTTTTCTTTC 59.509 33.333 0.00 0.00 36.79 2.62
1313 1389 3.414136 AACCTGTGAAGGCGCACCA 62.414 57.895 10.83 0.00 37.99 4.17
1344 1420 2.079170 TCATTGGTGAGGTTGGCAAA 57.921 45.000 0.00 0.00 0.00 3.68
1360 1436 0.929824 CAAACAAGAACCTGCACGCG 60.930 55.000 3.53 3.53 0.00 6.01
1379 1455 1.062587 CGTCCGTGGAATCAAAGCATC 59.937 52.381 0.00 0.00 0.00 3.91
1381 1457 2.749621 GTCCGTGGAATCAAAGCATCTT 59.250 45.455 0.00 0.00 0.00 2.40
1387 1463 5.405797 GTGGAATCAAAGCATCTTCTTTCC 58.594 41.667 0.00 0.00 34.31 3.13
1388 1464 5.047802 GTGGAATCAAAGCATCTTCTTTCCA 60.048 40.000 10.87 10.87 34.31 3.53
1391 1467 7.396907 TGGAATCAAAGCATCTTCTTTCCATAA 59.603 33.333 10.87 0.00 34.31 1.90
1415 1497 1.992557 AGGCTATGGTTTTGGTCTCCA 59.007 47.619 0.00 0.00 35.64 3.86
1436 1518 2.814336 ACCGTTTCATGAAAAGAGAGGC 59.186 45.455 28.59 12.61 32.72 4.70
1533 1618 2.190578 CCCTTGATCGAGGTGCCC 59.809 66.667 24.86 0.00 34.88 5.36
1537 1622 2.876368 CTTGATCGAGGTGCCCCCAC 62.876 65.000 1.50 0.00 41.32 4.61
1572 1657 4.660168 AGCATCTGAACCATCTCTTTGTT 58.340 39.130 0.00 0.00 0.00 2.83
1586 1671 0.179051 TTTGTTACGAAGGTGGGCGT 60.179 50.000 0.00 0.00 43.86 5.68
1680 1765 0.972471 TCATGGCAGAGCTCTTCGGA 60.972 55.000 15.27 5.22 0.00 4.55
1703 1788 2.377869 CCATGAAGGAGGGGATTGCTAT 59.622 50.000 0.00 0.00 41.22 2.97
1706 1791 4.213531 TGAAGGAGGGGATTGCTATAGA 57.786 45.455 3.21 0.00 0.00 1.98
1709 1794 2.110188 AGGAGGGGATTGCTATAGACGA 59.890 50.000 3.21 0.00 0.00 4.20
1760 1845 3.222173 TGTCTTCAAGGCCTTGCTTAA 57.778 42.857 36.24 25.05 40.24 1.85
1796 1881 1.489649 CTTGATGCCAGAGATGGAGGT 59.510 52.381 0.00 0.00 0.00 3.85
1804 1919 0.031616 AGAGATGGAGGTGGAGGGAC 60.032 60.000 0.00 0.00 0.00 4.46
1805 1920 0.325671 GAGATGGAGGTGGAGGGACA 60.326 60.000 0.00 0.00 0.00 4.02
1806 1921 0.326048 AGATGGAGGTGGAGGGACAG 60.326 60.000 0.00 0.00 0.00 3.51
1807 1922 1.307343 ATGGAGGTGGAGGGACAGG 60.307 63.158 0.00 0.00 0.00 4.00
1808 1923 3.403558 GGAGGTGGAGGGACAGGC 61.404 72.222 0.00 0.00 0.00 4.85
1809 1924 2.607750 GAGGTGGAGGGACAGGCA 60.608 66.667 0.00 0.00 0.00 4.75
1810 1925 2.608988 AGGTGGAGGGACAGGCAG 60.609 66.667 0.00 0.00 0.00 4.85
1811 1926 3.721706 GGTGGAGGGACAGGCAGG 61.722 72.222 0.00 0.00 0.00 4.85
1812 1927 3.721706 GTGGAGGGACAGGCAGGG 61.722 72.222 0.00 0.00 0.00 4.45
1825 1940 2.058595 GCAGGGGAAGCCGTCTCTA 61.059 63.158 0.00 0.00 0.00 2.43
1833 1948 2.494870 GGAAGCCGTCTCTAAGGTTACA 59.505 50.000 0.00 0.00 0.00 2.41
1857 1972 4.389576 CGACACTTGCTTGCCGCC 62.390 66.667 0.00 0.00 38.05 6.13
1927 2042 4.019919 CTGTCGGAGCACATAAATTTGG 57.980 45.455 0.00 0.00 0.00 3.28
1938 2053 1.828979 TAAATTTGGGCTCGGTGACC 58.171 50.000 0.00 0.00 46.75 4.02
2034 2149 1.074405 TCTGCTGCAATCTTGGAAGGT 59.926 47.619 3.02 0.00 0.00 3.50
2135 2252 2.349155 CCAAAGCGTAGTTCGTTGGTTC 60.349 50.000 4.10 0.00 39.35 3.62
2180 2298 6.324254 AGACTAAAATAGGTCGGTAGCTGAAT 59.676 38.462 0.00 0.00 37.52 2.57
2193 2311 5.163663 CGGTAGCTGAATTTATGCAAGGAAA 60.164 40.000 0.00 0.00 0.00 3.13
2295 2417 0.179179 GCGAGCTGAATTGTTGCCTC 60.179 55.000 0.00 0.00 0.00 4.70
2400 2557 4.607646 CGTGTTTGTATCTATCTACGCTCG 59.392 45.833 0.00 0.00 0.00 5.03
2432 2589 3.670055 CCAATTTGCAGCTTCAGTTAACG 59.330 43.478 0.00 0.00 0.00 3.18
2439 2596 3.739300 GCAGCTTCAGTTAACGAGTTACA 59.261 43.478 0.00 0.00 0.00 2.41
2467 2624 6.415573 ACTTATCCAAGGTTATGGTTCTGAC 58.584 40.000 0.00 0.00 41.46 3.51
2531 2692 0.106521 GGTGTTGCATTTGGCCAAGT 59.893 50.000 19.48 13.82 43.89 3.16
2544 2705 1.817099 CCAAGTGAGCTCCCATCGC 60.817 63.158 12.15 0.00 0.00 4.58
2574 2735 1.076485 ATCATGGCCACCTCCTTGC 60.076 57.895 8.16 0.00 32.92 4.01
2582 2743 1.597027 CACCTCCTTGCGGTCGTTT 60.597 57.895 0.00 0.00 30.82 3.60
2589 2828 2.058829 CTTGCGGTCGTTTGCTGGTT 62.059 55.000 0.00 0.00 0.00 3.67
2606 2845 1.525765 TTGCCTCTTGCTGCACGAA 60.526 52.632 10.16 0.00 42.00 3.85
2643 2882 1.755008 GAGGAGGTAGACCAGCGCT 60.755 63.158 2.64 2.64 38.89 5.92
2657 2896 1.189524 AGCGCTACCACCAACACCTA 61.190 55.000 8.99 0.00 0.00 3.08
2658 2897 0.739813 GCGCTACCACCAACACCTAG 60.740 60.000 0.00 0.00 0.00 3.02
2660 2899 0.392595 GCTACCACCAACACCTAGGC 60.393 60.000 9.30 0.00 0.00 3.93
2664 2903 4.388499 ACCAACACCTAGGCGGCG 62.388 66.667 9.30 0.51 35.61 6.46
2670 2909 4.124943 ACCTAGGCGGCGAGGAGA 62.125 66.667 38.29 5.91 36.61 3.71
2672 2911 2.203771 CCTAGGCGGCGAGGAGAAT 61.204 63.158 30.58 0.00 34.46 2.40
2679 2918 1.515954 GGCGAGGAGAATCGTCCAA 59.484 57.895 0.00 0.00 46.64 3.53
2680 2919 0.528684 GGCGAGGAGAATCGTCCAAG 60.529 60.000 0.00 0.00 46.64 3.61
2692 2931 1.376466 GTCCAAGGCCTGAAGCTCA 59.624 57.895 5.69 0.00 43.05 4.26
2702 2941 0.252479 CTGAAGCTCATGCCAGTCCT 59.748 55.000 0.00 0.00 40.80 3.85
2711 2950 4.479993 GCCAGTCCTCGCCAGCAT 62.480 66.667 0.00 0.00 0.00 3.79
2713 2952 2.202987 CAGTCCTCGCCAGCATCC 60.203 66.667 0.00 0.00 0.00 3.51
2746 2992 0.404040 CAGGTACCCCTTGCCTTGAA 59.596 55.000 8.74 0.00 38.52 2.69
2770 3016 6.974795 AGCCCCTGAAGAAATTATTAAGACT 58.025 36.000 0.00 0.00 0.00 3.24
2797 3049 6.839124 TGTTGAAGCACCATAAGAATTCAT 57.161 33.333 8.44 0.00 0.00 2.57
2806 3058 7.341256 AGCACCATAAGAATTCATGAGATTTGT 59.659 33.333 8.44 0.00 0.00 2.83
2809 3061 8.900781 ACCATAAGAATTCATGAGATTTGTGAG 58.099 33.333 8.44 0.00 0.00 3.51
2811 3063 9.932699 CATAAGAATTCATGAGATTTGTGAGAC 57.067 33.333 8.44 0.00 0.00 3.36
2812 3064 6.659361 AGAATTCATGAGATTTGTGAGACG 57.341 37.500 8.44 0.00 0.00 4.18
2813 3065 6.169094 AGAATTCATGAGATTTGTGAGACGT 58.831 36.000 8.44 0.00 0.00 4.34
2814 3066 7.323420 AGAATTCATGAGATTTGTGAGACGTA 58.677 34.615 8.44 0.00 0.00 3.57
2815 3067 7.819415 AGAATTCATGAGATTTGTGAGACGTAA 59.181 33.333 8.44 0.00 0.00 3.18
2834 3086 1.897423 GGCTATGCCCCCACAAAAC 59.103 57.895 0.00 0.00 44.06 2.43
2836 3088 0.902516 GCTATGCCCCCACAAAACCA 60.903 55.000 0.00 0.00 0.00 3.67
2838 3090 0.780637 TATGCCCCCACAAAACCAGA 59.219 50.000 0.00 0.00 0.00 3.86
2840 3092 0.325671 TGCCCCCACAAAACCAGAAA 60.326 50.000 0.00 0.00 0.00 2.52
2845 3097 4.133820 CCCCCACAAAACCAGAAATTTTC 58.866 43.478 0.66 0.66 0.00 2.29
2846 3098 3.807071 CCCCACAAAACCAGAAATTTTCG 59.193 43.478 3.57 0.00 34.02 3.46
2847 3099 4.442192 CCCCACAAAACCAGAAATTTTCGA 60.442 41.667 3.57 0.00 34.02 3.71
2849 3101 4.206200 CCACAAAACCAGAAATTTTCGACG 59.794 41.667 3.57 0.00 34.02 5.12
2891 3148 3.840831 TGCTGGTGCAGTCTATGTC 57.159 52.632 0.00 0.00 45.31 3.06
2892 3149 0.975887 TGCTGGTGCAGTCTATGTCA 59.024 50.000 0.00 0.00 45.31 3.58
2893 3150 1.556451 TGCTGGTGCAGTCTATGTCAT 59.444 47.619 0.00 0.00 45.31 3.06
2894 3151 2.026915 TGCTGGTGCAGTCTATGTCATT 60.027 45.455 0.00 0.00 45.31 2.57
2895 3152 3.012518 GCTGGTGCAGTCTATGTCATTT 58.987 45.455 0.00 0.00 39.41 2.32
2896 3153 3.064545 GCTGGTGCAGTCTATGTCATTTC 59.935 47.826 0.00 0.00 39.41 2.17
2897 3154 4.511527 CTGGTGCAGTCTATGTCATTTCT 58.488 43.478 0.00 0.00 0.00 2.52
2925 3182 8.621286 GTTTATGTTAACCCCTGACATTATCTG 58.379 37.037 2.48 0.00 35.72 2.90
2990 3252 5.437289 TGTGATTGAATGAAAGTCCACAC 57.563 39.130 0.00 0.00 31.74 3.82
3025 3287 3.537206 AAGACCAGGCAGCACGACC 62.537 63.158 0.00 0.00 0.00 4.79
3076 3338 2.482664 CCAGATCAGGATCAGACAACGG 60.483 54.545 11.55 0.00 40.22 4.44
3084 3346 2.429610 GGATCAGACAACGGCCTAGTAA 59.570 50.000 0.00 0.00 0.00 2.24
3086 3348 1.547372 TCAGACAACGGCCTAGTAACC 59.453 52.381 0.00 0.00 0.00 2.85
3090 3352 1.208776 ACAACGGCCTAGTAACCCATC 59.791 52.381 0.00 0.00 0.00 3.51
3094 3356 1.760613 CGGCCTAGTAACCCATCTGAA 59.239 52.381 0.00 0.00 0.00 3.02
3120 3382 6.538021 AGTGAGCATGCTCTAAAGAATAAGTG 59.462 38.462 39.46 0.00 43.12 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.516195 GCGGCCGTCCTCTCTTCC 62.516 72.222 28.70 0.93 0.00 3.46
1 2 3.296709 TTGCGGCCGTCCTCTCTTC 62.297 63.158 28.70 6.86 0.00 2.87
2 3 3.302347 CTTGCGGCCGTCCTCTCTT 62.302 63.158 28.70 0.00 0.00 2.85
3 4 3.764466 CTTGCGGCCGTCCTCTCT 61.764 66.667 28.70 0.00 0.00 3.10
4 5 4.821589 CCTTGCGGCCGTCCTCTC 62.822 72.222 28.70 9.35 0.00 3.20
15 16 2.629656 CCAAACCCTGAGCCTTGCG 61.630 63.158 0.00 0.00 0.00 4.85
16 17 2.278330 CCCAAACCCTGAGCCTTGC 61.278 63.158 0.00 0.00 0.00 4.01
17 18 1.153756 ACCCAAACCCTGAGCCTTG 59.846 57.895 0.00 0.00 0.00 3.61
18 19 1.153756 CACCCAAACCCTGAGCCTT 59.846 57.895 0.00 0.00 0.00 4.35
19 20 2.845345 CCACCCAAACCCTGAGCCT 61.845 63.158 0.00 0.00 0.00 4.58
20 21 2.283173 CCACCCAAACCCTGAGCC 60.283 66.667 0.00 0.00 0.00 4.70
21 22 2.283173 CCCACCCAAACCCTGAGC 60.283 66.667 0.00 0.00 0.00 4.26
22 23 2.440599 CCCCACCCAAACCCTGAG 59.559 66.667 0.00 0.00 0.00 3.35
23 24 2.370403 ACCCCACCCAAACCCTGA 60.370 61.111 0.00 0.00 0.00 3.86
24 25 2.203625 CACCCCACCCAAACCCTG 60.204 66.667 0.00 0.00 0.00 4.45
25 26 3.517497 CCACCCCACCCAAACCCT 61.517 66.667 0.00 0.00 0.00 4.34
26 27 4.631740 CCCACCCCACCCAAACCC 62.632 72.222 0.00 0.00 0.00 4.11
27 28 4.631740 CCCCACCCCACCCAAACC 62.632 72.222 0.00 0.00 0.00 3.27
28 29 4.631740 CCCCCACCCCACCCAAAC 62.632 72.222 0.00 0.00 0.00 2.93
33 34 3.840132 AAACACCCCCACCCCACC 61.840 66.667 0.00 0.00 0.00 4.61
34 35 2.523168 CAAACACCCCCACCCCAC 60.523 66.667 0.00 0.00 0.00 4.61
35 36 3.838913 CCAAACACCCCCACCCCA 61.839 66.667 0.00 0.00 0.00 4.96
36 37 4.631740 CCCAAACACCCCCACCCC 62.632 72.222 0.00 0.00 0.00 4.95
37 38 4.631740 CCCCAAACACCCCCACCC 62.632 72.222 0.00 0.00 0.00 4.61
38 39 3.840132 ACCCCAAACACCCCCACC 61.840 66.667 0.00 0.00 0.00 4.61
39 40 2.523168 CACCCCAAACACCCCCAC 60.523 66.667 0.00 0.00 0.00 4.61
40 41 3.838913 CCACCCCAAACACCCCCA 61.839 66.667 0.00 0.00 0.00 4.96
41 42 4.631740 CCCACCCCAAACACCCCC 62.632 72.222 0.00 0.00 0.00 5.40
42 43 4.631740 CCCCACCCCAAACACCCC 62.632 72.222 0.00 0.00 0.00 4.95
43 44 4.631740 CCCCCACCCCAAACACCC 62.632 72.222 0.00 0.00 0.00 4.61
44 45 3.840132 ACCCCCACCCCAAACACC 61.840 66.667 0.00 0.00 0.00 4.16
45 46 2.523168 CACCCCCACCCCAAACAC 60.523 66.667 0.00 0.00 0.00 3.32
46 47 3.838913 CCACCCCCACCCCAAACA 61.839 66.667 0.00 0.00 0.00 2.83
47 48 4.631740 CCCACCCCCACCCCAAAC 62.632 72.222 0.00 0.00 0.00 2.93
48 49 4.885449 TCCCACCCCCACCCCAAA 62.885 66.667 0.00 0.00 0.00 3.28
56 57 4.825679 CTCTCCCCTCCCACCCCC 62.826 77.778 0.00 0.00 0.00 5.40
57 58 3.695825 TCTCTCCCCTCCCACCCC 61.696 72.222 0.00 0.00 0.00 4.95
58 59 2.041405 CTCTCTCCCCTCCCACCC 60.041 72.222 0.00 0.00 0.00 4.61
59 60 1.075600 CTCTCTCTCCCCTCCCACC 60.076 68.421 0.00 0.00 0.00 4.61
60 61 0.686112 CACTCTCTCTCCCCTCCCAC 60.686 65.000 0.00 0.00 0.00 4.61
61 62 1.700368 CACTCTCTCTCCCCTCCCA 59.300 63.158 0.00 0.00 0.00 4.37
62 63 1.075600 CCACTCTCTCTCCCCTCCC 60.076 68.421 0.00 0.00 0.00 4.30
63 64 1.075600 CCCACTCTCTCTCCCCTCC 60.076 68.421 0.00 0.00 0.00 4.30
64 65 1.075600 CCCCACTCTCTCTCCCCTC 60.076 68.421 0.00 0.00 0.00 4.30
65 66 3.114390 CCCCACTCTCTCTCCCCT 58.886 66.667 0.00 0.00 0.00 4.79
66 67 2.766229 GCCCCACTCTCTCTCCCC 60.766 72.222 0.00 0.00 0.00 4.81
67 68 2.766229 GGCCCCACTCTCTCTCCC 60.766 72.222 0.00 0.00 0.00 4.30
68 69 2.039624 TGGCCCCACTCTCTCTCC 59.960 66.667 0.00 0.00 0.00 3.71
69 70 2.730524 GCTGGCCCCACTCTCTCTC 61.731 68.421 0.00 0.00 0.00 3.20
70 71 2.686835 GCTGGCCCCACTCTCTCT 60.687 66.667 0.00 0.00 0.00 3.10
71 72 2.880629 TAGGCTGGCCCCACTCTCTC 62.881 65.000 8.11 0.00 36.58 3.20
72 73 2.477190 TTAGGCTGGCCCCACTCTCT 62.477 60.000 8.11 0.00 36.58 3.10
73 74 1.977293 CTTAGGCTGGCCCCACTCTC 61.977 65.000 8.11 0.00 36.58 3.20
74 75 1.997874 CTTAGGCTGGCCCCACTCT 60.998 63.158 8.11 0.00 36.58 3.24
75 76 2.301738 ACTTAGGCTGGCCCCACTC 61.302 63.158 8.11 0.00 36.58 3.51
76 77 2.204151 ACTTAGGCTGGCCCCACT 60.204 61.111 8.11 0.00 36.58 4.00
77 78 2.044946 CACTTAGGCTGGCCCCAC 60.045 66.667 8.11 0.00 36.58 4.61
78 79 2.204074 TCACTTAGGCTGGCCCCA 60.204 61.111 8.11 0.00 36.58 4.96
79 80 2.137177 TTGTCACTTAGGCTGGCCCC 62.137 60.000 8.11 0.00 36.58 5.80
80 81 0.251165 TTTGTCACTTAGGCTGGCCC 60.251 55.000 8.11 0.00 36.58 5.80
81 82 0.881796 GTTTGTCACTTAGGCTGGCC 59.118 55.000 3.00 3.00 0.00 5.36
82 83 1.537202 CTGTTTGTCACTTAGGCTGGC 59.463 52.381 0.00 0.00 0.00 4.85
83 84 2.808543 GTCTGTTTGTCACTTAGGCTGG 59.191 50.000 0.00 0.00 0.00 4.85
84 85 3.496130 CAGTCTGTTTGTCACTTAGGCTG 59.504 47.826 0.00 0.00 35.16 4.85
85 86 3.134804 ACAGTCTGTTTGTCACTTAGGCT 59.865 43.478 0.00 0.00 0.00 4.58
86 87 3.248602 CACAGTCTGTTTGTCACTTAGGC 59.751 47.826 1.67 0.00 0.00 3.93
87 88 3.248602 GCACAGTCTGTTTGTCACTTAGG 59.751 47.826 1.67 0.00 0.00 2.69
88 89 3.871006 TGCACAGTCTGTTTGTCACTTAG 59.129 43.478 1.67 0.00 0.00 2.18
89 90 3.867857 TGCACAGTCTGTTTGTCACTTA 58.132 40.909 1.67 0.00 0.00 2.24
90 91 2.710377 TGCACAGTCTGTTTGTCACTT 58.290 42.857 1.67 0.00 0.00 3.16
91 92 2.401583 TGCACAGTCTGTTTGTCACT 57.598 45.000 1.67 0.00 0.00 3.41
92 93 2.348872 CGATGCACAGTCTGTTTGTCAC 60.349 50.000 1.67 0.00 0.00 3.67
93 94 1.866601 CGATGCACAGTCTGTTTGTCA 59.133 47.619 1.67 0.00 0.00 3.58
94 95 1.398960 GCGATGCACAGTCTGTTTGTC 60.399 52.381 1.67 0.81 0.00 3.18
95 96 0.588252 GCGATGCACAGTCTGTTTGT 59.412 50.000 1.67 0.00 0.00 2.83
96 97 0.110056 GGCGATGCACAGTCTGTTTG 60.110 55.000 1.67 0.00 0.00 2.93
97 98 0.250467 AGGCGATGCACAGTCTGTTT 60.250 50.000 1.67 0.00 0.00 2.83
98 99 0.608130 TAGGCGATGCACAGTCTGTT 59.392 50.000 1.67 0.00 0.00 3.16
99 100 0.608130 TTAGGCGATGCACAGTCTGT 59.392 50.000 0.00 0.00 0.00 3.41
100 101 1.284657 CTTAGGCGATGCACAGTCTG 58.715 55.000 7.53 0.00 0.00 3.51
101 102 0.176680 CCTTAGGCGATGCACAGTCT 59.823 55.000 2.85 2.85 0.00 3.24
102 103 0.175760 TCCTTAGGCGATGCACAGTC 59.824 55.000 0.00 0.00 0.00 3.51
103 104 0.613260 TTCCTTAGGCGATGCACAGT 59.387 50.000 0.00 0.00 0.00 3.55
104 105 1.009829 GTTCCTTAGGCGATGCACAG 58.990 55.000 0.00 0.00 0.00 3.66
105 106 0.392461 GGTTCCTTAGGCGATGCACA 60.392 55.000 0.00 0.00 0.00 4.57
106 107 1.429148 CGGTTCCTTAGGCGATGCAC 61.429 60.000 0.00 0.00 0.00 4.57
107 108 1.153449 CGGTTCCTTAGGCGATGCA 60.153 57.895 0.00 0.00 0.00 3.96
108 109 1.887707 CCGGTTCCTTAGGCGATGC 60.888 63.158 0.00 0.00 0.00 3.91
109 110 1.887707 GCCGGTTCCTTAGGCGATG 60.888 63.158 1.90 0.00 41.53 3.84
110 111 2.504519 GCCGGTTCCTTAGGCGAT 59.495 61.111 1.90 0.00 41.53 4.58
113 114 4.468689 AGCGCCGGTTCCTTAGGC 62.469 66.667 2.29 0.00 46.88 3.93
114 115 2.511600 CAGCGCCGGTTCCTTAGG 60.512 66.667 2.29 0.00 0.00 2.69
115 116 3.195698 GCAGCGCCGGTTCCTTAG 61.196 66.667 2.29 0.00 0.00 2.18
116 117 4.010224 TGCAGCGCCGGTTCCTTA 62.010 61.111 2.29 0.00 0.00 2.69
120 121 2.309764 CTAATGTGCAGCGCCGGTTC 62.310 60.000 2.29 0.00 0.00 3.62
121 122 2.359354 TAATGTGCAGCGCCGGTT 60.359 55.556 2.29 0.00 0.00 4.44
122 123 2.796483 TTCTAATGTGCAGCGCCGGT 62.796 55.000 2.29 0.00 0.00 5.28
123 124 2.040213 CTTCTAATGTGCAGCGCCGG 62.040 60.000 2.29 0.00 0.00 6.13
124 125 1.349627 CTTCTAATGTGCAGCGCCG 59.650 57.895 2.29 0.00 0.00 6.46
125 126 0.097674 CACTTCTAATGTGCAGCGCC 59.902 55.000 2.29 0.00 0.00 6.53
126 127 0.798776 ACACTTCTAATGTGCAGCGC 59.201 50.000 0.00 0.00 38.86 5.92
127 128 2.068519 TCACACTTCTAATGTGCAGCG 58.931 47.619 0.20 0.00 45.82 5.18
128 129 2.159787 CGTCACACTTCTAATGTGCAGC 60.160 50.000 0.20 0.00 45.82 5.25
129 130 2.159787 GCGTCACACTTCTAATGTGCAG 60.160 50.000 0.20 0.00 45.82 4.41
130 131 1.798223 GCGTCACACTTCTAATGTGCA 59.202 47.619 0.20 0.00 45.82 4.57
131 132 1.128692 GGCGTCACACTTCTAATGTGC 59.871 52.381 0.20 0.00 45.82 4.57
133 134 1.271379 TCGGCGTCACACTTCTAATGT 59.729 47.619 6.85 0.00 0.00 2.71
134 135 1.990799 TCGGCGTCACACTTCTAATG 58.009 50.000 6.85 0.00 0.00 1.90
135 136 2.540515 CATCGGCGTCACACTTCTAAT 58.459 47.619 6.85 0.00 0.00 1.73
136 137 1.990799 CATCGGCGTCACACTTCTAA 58.009 50.000 6.85 0.00 0.00 2.10
137 138 0.457853 GCATCGGCGTCACACTTCTA 60.458 55.000 6.85 0.00 0.00 2.10
138 139 1.738099 GCATCGGCGTCACACTTCT 60.738 57.895 6.85 0.00 0.00 2.85
139 140 2.740714 GGCATCGGCGTCACACTTC 61.741 63.158 6.85 0.00 42.47 3.01
140 141 2.742372 GGCATCGGCGTCACACTT 60.742 61.111 6.85 0.00 42.47 3.16
141 142 4.760047 GGGCATCGGCGTCACACT 62.760 66.667 6.85 0.00 42.47 3.55
142 143 3.365291 TAGGGCATCGGCGTCACAC 62.365 63.158 6.85 0.00 42.47 3.82
143 144 3.071837 TAGGGCATCGGCGTCACA 61.072 61.111 6.85 0.00 42.47 3.58
144 145 2.279517 CTAGGGCATCGGCGTCAC 60.280 66.667 6.85 0.00 42.47 3.67
145 146 2.441348 TCTAGGGCATCGGCGTCA 60.441 61.111 6.85 0.00 42.47 4.35
146 147 2.027751 GTCTAGGGCATCGGCGTC 59.972 66.667 6.85 0.00 42.47 5.19
147 148 3.900892 CGTCTAGGGCATCGGCGT 61.901 66.667 6.85 0.00 42.47 5.68
149 150 3.917760 AGCGTCTAGGGCATCGGC 61.918 66.667 8.98 0.00 40.13 5.54
150 151 2.028190 CAGCGTCTAGGGCATCGG 59.972 66.667 8.98 0.00 0.00 4.18
151 152 2.659897 GCAGCGTCTAGGGCATCG 60.660 66.667 8.98 0.00 0.00 3.84
152 153 1.884926 GTGCAGCGTCTAGGGCATC 60.885 63.158 8.98 1.84 38.68 3.91
153 154 1.976132 ATGTGCAGCGTCTAGGGCAT 61.976 55.000 8.98 0.00 38.68 4.40
154 155 2.184020 AATGTGCAGCGTCTAGGGCA 62.184 55.000 8.98 0.00 0.00 5.36
155 156 0.179084 TAATGTGCAGCGTCTAGGGC 60.179 55.000 0.00 0.00 0.00 5.19
156 157 1.134818 TGTAATGTGCAGCGTCTAGGG 60.135 52.381 0.00 0.00 0.00 3.53
157 158 2.293677 TGTAATGTGCAGCGTCTAGG 57.706 50.000 0.00 0.00 0.00 3.02
158 159 3.061295 CACTTGTAATGTGCAGCGTCTAG 59.939 47.826 0.00 0.00 35.12 2.43
159 160 2.993220 CACTTGTAATGTGCAGCGTCTA 59.007 45.455 0.00 0.00 35.12 2.59
160 161 1.800586 CACTTGTAATGTGCAGCGTCT 59.199 47.619 0.00 0.00 35.12 4.18
161 162 1.531149 ACACTTGTAATGTGCAGCGTC 59.469 47.619 0.00 0.00 45.01 5.19
162 163 1.264020 CACACTTGTAATGTGCAGCGT 59.736 47.619 0.00 0.00 45.01 5.07
163 164 1.530720 TCACACTTGTAATGTGCAGCG 59.469 47.619 0.20 0.00 45.01 5.18
164 165 2.662791 CGTCACACTTGTAATGTGCAGC 60.663 50.000 0.20 0.00 45.01 5.25
165 166 2.662791 GCGTCACACTTGTAATGTGCAG 60.663 50.000 0.20 0.00 45.01 4.41
166 167 1.262950 GCGTCACACTTGTAATGTGCA 59.737 47.619 0.20 0.00 45.01 4.57
167 168 1.399727 GGCGTCACACTTGTAATGTGC 60.400 52.381 0.20 0.00 45.01 4.57
169 170 2.543777 AGGCGTCACACTTGTAATGT 57.456 45.000 0.00 0.00 0.00 2.71
170 171 3.242413 GCATAGGCGTCACACTTGTAATG 60.242 47.826 0.00 0.00 0.00 1.90
171 172 2.936498 GCATAGGCGTCACACTTGTAAT 59.064 45.455 0.00 0.00 0.00 1.89
172 173 2.343101 GCATAGGCGTCACACTTGTAA 58.657 47.619 0.00 0.00 0.00 2.41
173 174 2.004583 GCATAGGCGTCACACTTGTA 57.995 50.000 0.00 0.00 0.00 2.41
174 175 2.840974 GCATAGGCGTCACACTTGT 58.159 52.632 0.00 0.00 0.00 3.16
254 255 0.109964 TTGTTTTAGGCGTCGCATGC 60.110 50.000 20.50 7.91 0.00 4.06
255 256 1.602191 GTTGTTTTAGGCGTCGCATG 58.398 50.000 20.50 0.00 0.00 4.06
256 257 0.165079 CGTTGTTTTAGGCGTCGCAT 59.835 50.000 20.50 15.54 0.00 4.73
257 258 0.875040 TCGTTGTTTTAGGCGTCGCA 60.875 50.000 20.50 0.00 0.00 5.10
258 259 0.449993 GTCGTTGTTTTAGGCGTCGC 60.450 55.000 9.22 9.22 0.00 5.19
259 260 0.179292 CGTCGTTGTTTTAGGCGTCG 60.179 55.000 0.00 0.00 0.00 5.12
260 261 0.449993 GCGTCGTTGTTTTAGGCGTC 60.450 55.000 0.00 0.00 0.00 5.19
261 262 0.877213 AGCGTCGTTGTTTTAGGCGT 60.877 50.000 0.00 0.00 0.00 5.68
262 263 0.450482 CAGCGTCGTTGTTTTAGGCG 60.450 55.000 0.28 0.00 0.00 5.52
263 264 0.724785 GCAGCGTCGTTGTTTTAGGC 60.725 55.000 10.87 0.00 0.00 3.93
264 265 0.584396 TGCAGCGTCGTTGTTTTAGG 59.416 50.000 10.87 0.00 0.00 2.69
265 266 2.233355 CATGCAGCGTCGTTGTTTTAG 58.767 47.619 10.87 0.00 0.00 1.85
266 267 1.069568 CCATGCAGCGTCGTTGTTTTA 60.070 47.619 10.87 0.00 0.00 1.52
267 268 0.317770 CCATGCAGCGTCGTTGTTTT 60.318 50.000 10.87 0.00 0.00 2.43
268 269 1.282570 CCATGCAGCGTCGTTGTTT 59.717 52.632 10.87 0.00 0.00 2.83
269 270 1.891919 ACCATGCAGCGTCGTTGTT 60.892 52.632 10.87 0.00 0.00 2.83
270 271 2.280797 ACCATGCAGCGTCGTTGT 60.281 55.556 10.87 0.00 0.00 3.32
271 272 2.174107 CACCATGCAGCGTCGTTG 59.826 61.111 4.52 4.52 0.00 4.10
272 273 3.726517 GCACCATGCAGCGTCGTT 61.727 61.111 0.00 0.00 44.26 3.85
281 282 2.883730 CGCTGCATTGCACCATGC 60.884 61.111 15.10 15.10 45.29 4.06
282 283 2.883730 GCGCTGCATTGCACCATG 60.884 61.111 7.38 0.00 33.79 3.66
283 284 4.137872 GGCGCTGCATTGCACCAT 62.138 61.111 7.38 0.00 35.42 3.55
305 306 4.858680 TTTGTGTGGCGCCCGACA 62.859 61.111 26.77 23.15 0.00 4.35
306 307 3.587933 TTTTGTGTGGCGCCCGAC 61.588 61.111 26.77 20.63 0.00 4.79
307 308 3.587933 GTTTTGTGTGGCGCCCGA 61.588 61.111 26.77 7.30 0.00 5.14
308 309 4.973360 CGTTTTGTGTGGCGCCCG 62.973 66.667 26.77 13.92 0.00 6.13
309 310 4.639171 CCGTTTTGTGTGGCGCCC 62.639 66.667 26.77 16.24 0.00 6.13
310 311 3.817274 GACCGTTTTGTGTGGCGCC 62.817 63.158 22.73 22.73 0.00 6.53
311 312 2.353030 GACCGTTTTGTGTGGCGC 60.353 61.111 0.00 0.00 0.00 6.53
312 313 1.010125 CAGACCGTTTTGTGTGGCG 60.010 57.895 0.00 0.00 0.00 5.69
313 314 0.454196 AACAGACCGTTTTGTGTGGC 59.546 50.000 0.00 0.00 32.35 5.01
314 315 3.314080 ACATAACAGACCGTTTTGTGTGG 59.686 43.478 0.00 0.00 44.81 4.17
315 316 4.545823 ACATAACAGACCGTTTTGTGTG 57.454 40.909 0.00 0.00 44.81 3.82
318 319 5.821516 TTTCACATAACAGACCGTTTTGT 57.178 34.783 0.00 0.00 46.66 2.83
339 340 7.230712 ACGATCTAACCTGGTCTTGAAATTTTT 59.769 33.333 0.00 0.00 0.00 1.94
340 341 6.715264 ACGATCTAACCTGGTCTTGAAATTTT 59.285 34.615 0.00 0.00 0.00 1.82
341 342 6.149474 CACGATCTAACCTGGTCTTGAAATTT 59.851 38.462 0.00 0.00 0.00 1.82
342 343 5.643777 CACGATCTAACCTGGTCTTGAAATT 59.356 40.000 0.00 0.00 0.00 1.82
343 344 5.046591 TCACGATCTAACCTGGTCTTGAAAT 60.047 40.000 0.00 0.00 0.00 2.17
344 345 4.282449 TCACGATCTAACCTGGTCTTGAAA 59.718 41.667 0.00 0.00 0.00 2.69
345 346 3.830178 TCACGATCTAACCTGGTCTTGAA 59.170 43.478 0.00 0.00 0.00 2.69
346 347 3.427573 TCACGATCTAACCTGGTCTTGA 58.572 45.455 0.00 0.00 0.00 3.02
347 348 3.868757 TCACGATCTAACCTGGTCTTG 57.131 47.619 0.00 0.00 0.00 3.02
348 349 5.046591 TCAATTCACGATCTAACCTGGTCTT 60.047 40.000 0.00 0.00 0.00 3.01
349 350 4.466370 TCAATTCACGATCTAACCTGGTCT 59.534 41.667 0.00 0.00 0.00 3.85
350 351 4.755411 TCAATTCACGATCTAACCTGGTC 58.245 43.478 0.00 0.00 0.00 4.02
351 352 4.819105 TCAATTCACGATCTAACCTGGT 57.181 40.909 0.00 0.00 0.00 4.00
352 353 6.316140 TGAAATCAATTCACGATCTAACCTGG 59.684 38.462 0.00 0.00 43.08 4.45
353 354 7.307493 TGAAATCAATTCACGATCTAACCTG 57.693 36.000 0.00 0.00 43.08 4.00
371 372 6.567321 CGCATATTTGACCTGAGGATGAAATC 60.567 42.308 4.99 0.00 44.55 2.17
372 373 5.240183 CGCATATTTGACCTGAGGATGAAAT 59.760 40.000 4.99 8.71 0.00 2.17
373 374 4.576053 CGCATATTTGACCTGAGGATGAAA 59.424 41.667 4.99 0.93 0.00 2.69
374 375 4.129380 CGCATATTTGACCTGAGGATGAA 58.871 43.478 4.99 0.00 0.00 2.57
375 376 3.134623 ACGCATATTTGACCTGAGGATGA 59.865 43.478 4.99 0.00 0.00 2.92
376 377 3.470709 ACGCATATTTGACCTGAGGATG 58.529 45.455 4.99 0.00 0.00 3.51
377 378 3.845781 ACGCATATTTGACCTGAGGAT 57.154 42.857 4.99 0.00 0.00 3.24
378 379 3.627395 AACGCATATTTGACCTGAGGA 57.373 42.857 4.99 0.00 0.00 3.71
379 380 4.396166 AGAAAACGCATATTTGACCTGAGG 59.604 41.667 0.00 0.00 0.00 3.86
380 381 5.327091 CAGAAAACGCATATTTGACCTGAG 58.673 41.667 0.00 0.00 0.00 3.35
381 382 4.379394 GCAGAAAACGCATATTTGACCTGA 60.379 41.667 0.00 0.00 0.00 3.86
382 383 3.853671 GCAGAAAACGCATATTTGACCTG 59.146 43.478 0.00 0.00 0.00 4.00
383 384 3.119495 GGCAGAAAACGCATATTTGACCT 60.119 43.478 0.00 0.00 0.00 3.85
384 385 3.179048 GGCAGAAAACGCATATTTGACC 58.821 45.455 0.00 0.00 0.00 4.02
385 386 3.832276 TGGCAGAAAACGCATATTTGAC 58.168 40.909 0.00 0.00 0.00 3.18
386 387 3.755905 TCTGGCAGAAAACGCATATTTGA 59.244 39.130 16.28 0.00 0.00 2.69
387 388 4.095410 TCTGGCAGAAAACGCATATTTG 57.905 40.909 16.28 0.00 0.00 2.32
388 389 3.758554 ACTCTGGCAGAAAACGCATATTT 59.241 39.130 19.29 0.00 0.00 1.40
389 390 3.127548 CACTCTGGCAGAAAACGCATATT 59.872 43.478 19.29 0.00 0.00 1.28
390 391 2.679837 CACTCTGGCAGAAAACGCATAT 59.320 45.455 19.29 0.00 0.00 1.78
391 392 2.076100 CACTCTGGCAGAAAACGCATA 58.924 47.619 19.29 0.00 0.00 3.14
392 393 0.877071 CACTCTGGCAGAAAACGCAT 59.123 50.000 19.29 0.00 0.00 4.73
393 394 1.165907 CCACTCTGGCAGAAAACGCA 61.166 55.000 19.29 0.00 0.00 5.24
394 395 1.166531 ACCACTCTGGCAGAAAACGC 61.167 55.000 19.29 0.00 42.67 4.84
395 396 1.798813 GTACCACTCTGGCAGAAAACG 59.201 52.381 19.29 9.27 42.67 3.60
396 397 2.846193 TGTACCACTCTGGCAGAAAAC 58.154 47.619 19.29 11.97 42.67 2.43
397 398 3.788227 ATGTACCACTCTGGCAGAAAA 57.212 42.857 19.29 0.00 42.67 2.29
398 399 5.070446 CCTATATGTACCACTCTGGCAGAAA 59.930 44.000 19.29 0.00 42.67 2.52
399 400 4.588951 CCTATATGTACCACTCTGGCAGAA 59.411 45.833 19.29 1.54 42.67 3.02
400 401 4.152647 CCTATATGTACCACTCTGGCAGA 58.847 47.826 17.68 17.68 42.67 4.26
401 402 3.898123 ACCTATATGTACCACTCTGGCAG 59.102 47.826 8.58 8.58 42.67 4.85
402 403 3.923648 ACCTATATGTACCACTCTGGCA 58.076 45.455 0.00 0.00 42.67 4.92
403 404 4.957684 AACCTATATGTACCACTCTGGC 57.042 45.455 0.00 0.00 42.67 4.85
404 405 7.125792 AGAAAACCTATATGTACCACTCTGG 57.874 40.000 0.00 0.00 45.02 3.86
427 428 9.953825 CGCGCCTATAGATAAAGTTTATTTAAG 57.046 33.333 9.47 8.26 0.00 1.85
428 429 8.928733 CCGCGCCTATAGATAAAGTTTATTTAA 58.071 33.333 9.47 0.00 0.00 1.52
429 430 7.063780 GCCGCGCCTATAGATAAAGTTTATTTA 59.936 37.037 9.47 8.66 0.00 1.40
430 431 6.128363 GCCGCGCCTATAGATAAAGTTTATTT 60.128 38.462 9.47 6.72 0.00 1.40
431 432 5.350640 GCCGCGCCTATAGATAAAGTTTATT 59.649 40.000 9.47 3.32 0.00 1.40
432 433 4.868734 GCCGCGCCTATAGATAAAGTTTAT 59.131 41.667 7.87 7.87 0.00 1.40
433 434 4.240096 GCCGCGCCTATAGATAAAGTTTA 58.760 43.478 0.00 0.00 0.00 2.01
434 435 3.064931 GCCGCGCCTATAGATAAAGTTT 58.935 45.455 0.00 0.00 0.00 2.66
435 436 2.612221 GGCCGCGCCTATAGATAAAGTT 60.612 50.000 0.00 0.00 46.69 2.66
436 437 1.067071 GGCCGCGCCTATAGATAAAGT 60.067 52.381 0.00 0.00 46.69 2.66
437 438 1.641577 GGCCGCGCCTATAGATAAAG 58.358 55.000 0.00 0.00 46.69 1.85
438 439 3.826637 GGCCGCGCCTATAGATAAA 57.173 52.632 0.00 0.00 46.69 1.40
453 454 4.284550 TGGTGGTGCAAGGAGGCC 62.285 66.667 0.00 0.00 0.00 5.19
454 455 2.490270 ATCTGGTGGTGCAAGGAGGC 62.490 60.000 0.00 0.00 0.00 4.70
455 456 0.679002 CATCTGGTGGTGCAAGGAGG 60.679 60.000 0.00 0.00 0.00 4.30
456 457 1.310933 GCATCTGGTGGTGCAAGGAG 61.311 60.000 0.00 0.00 40.94 3.69
457 458 1.303561 GCATCTGGTGGTGCAAGGA 60.304 57.895 0.00 0.00 40.94 3.36
458 459 1.303888 AGCATCTGGTGGTGCAAGG 60.304 57.895 4.08 0.00 43.63 3.61
459 460 4.410225 AGCATCTGGTGGTGCAAG 57.590 55.556 4.08 0.00 43.63 4.01
464 465 2.353958 CAGGCAGCATCTGGTGGT 59.646 61.111 11.02 0.00 43.24 4.16
465 466 3.138798 GCAGGCAGCATCTGGTGG 61.139 66.667 11.02 0.00 44.79 4.61
466 467 3.506096 CGCAGGCAGCATCTGGTG 61.506 66.667 1.96 5.04 46.13 4.17
467 468 4.025858 ACGCAGGCAGCATCTGGT 62.026 61.111 1.96 0.00 46.13 4.00
468 469 3.506096 CACGCAGGCAGCATCTGG 61.506 66.667 1.96 0.00 46.13 3.86
469 470 2.745100 ACACGCAGGCAGCATCTG 60.745 61.111 1.96 0.00 46.13 2.90
470 471 2.745100 CACACGCAGGCAGCATCT 60.745 61.111 1.96 0.00 46.13 2.90
471 472 3.807538 CCACACGCAGGCAGCATC 61.808 66.667 1.96 0.00 46.13 3.91
472 473 4.648626 ACCACACGCAGGCAGCAT 62.649 61.111 1.96 0.00 46.13 3.79
475 476 3.567478 TACGACCACACGCAGGCAG 62.567 63.158 0.00 0.00 36.70 4.85
476 477 3.567478 CTACGACCACACGCAGGCA 62.567 63.158 0.00 0.00 36.70 4.75
477 478 2.809601 CTACGACCACACGCAGGC 60.810 66.667 0.00 0.00 36.70 4.85
478 479 2.126071 CCTACGACCACACGCAGG 60.126 66.667 0.00 0.00 39.82 4.85
479 480 1.733041 CACCTACGACCACACGCAG 60.733 63.158 0.00 0.00 36.70 5.18
480 481 2.337170 CACCTACGACCACACGCA 59.663 61.111 0.00 0.00 36.70 5.24
481 482 3.110178 GCACCTACGACCACACGC 61.110 66.667 0.00 0.00 36.70 5.34
482 483 1.080093 ATGCACCTACGACCACACG 60.080 57.895 0.00 0.00 39.31 4.49
483 484 1.635663 GCATGCACCTACGACCACAC 61.636 60.000 14.21 0.00 0.00 3.82
484 485 1.375396 GCATGCACCTACGACCACA 60.375 57.895 14.21 0.00 0.00 4.17
485 486 2.106683 GGCATGCACCTACGACCAC 61.107 63.158 21.36 0.00 0.00 4.16
486 487 1.909459 ATGGCATGCACCTACGACCA 61.909 55.000 21.36 4.91 0.00 4.02
487 488 1.153168 ATGGCATGCACCTACGACC 60.153 57.895 21.36 0.00 0.00 4.79
488 489 0.461870 TGATGGCATGCACCTACGAC 60.462 55.000 21.36 0.00 0.00 4.34
489 490 0.251634 TTGATGGCATGCACCTACGA 59.748 50.000 21.36 2.92 0.00 3.43
490 491 1.311859 ATTGATGGCATGCACCTACG 58.688 50.000 21.36 0.00 0.00 3.51
491 492 4.074259 TCATATTGATGGCATGCACCTAC 58.926 43.478 21.36 1.47 33.49 3.18
492 493 4.074259 GTCATATTGATGGCATGCACCTA 58.926 43.478 21.36 4.97 37.63 3.08
493 494 2.889045 GTCATATTGATGGCATGCACCT 59.111 45.455 21.36 2.39 37.63 4.00
494 495 2.351060 CGTCATATTGATGGCATGCACC 60.351 50.000 21.36 8.12 37.55 5.01
495 496 2.549329 TCGTCATATTGATGGCATGCAC 59.451 45.455 21.36 9.64 37.55 4.57
496 497 2.848691 TCGTCATATTGATGGCATGCA 58.151 42.857 21.36 6.13 37.55 3.96
497 498 3.902261 TTCGTCATATTGATGGCATGC 57.098 42.857 9.90 9.90 37.55 4.06
498 499 5.616488 TGATTCGTCATATTGATGGCATG 57.384 39.130 3.81 0.00 37.55 4.06
499 500 6.638096 TTTGATTCGTCATATTGATGGCAT 57.362 33.333 0.00 0.00 37.55 4.40
500 501 6.448207 TTTTGATTCGTCATATTGATGGCA 57.552 33.333 0.00 0.00 37.55 4.92
501 502 7.140705 TGATTTTGATTCGTCATATTGATGGC 58.859 34.615 0.00 0.00 34.27 4.40
502 503 9.518906 TTTGATTTTGATTCGTCATATTGATGG 57.481 29.630 0.00 0.00 34.27 3.51
511 512 9.473640 TGATTCAATTTTGATTTTGATTCGTCA 57.526 25.926 0.00 0.00 36.07 4.35
559 560 8.671028 GCAACGGAAGAGTAAATATCCTTTTTA 58.329 33.333 0.00 0.00 0.00 1.52
560 561 7.175990 TGCAACGGAAGAGTAAATATCCTTTTT 59.824 33.333 0.00 0.00 0.00 1.94
561 562 6.657541 TGCAACGGAAGAGTAAATATCCTTTT 59.342 34.615 0.00 0.00 0.00 2.27
562 563 6.177610 TGCAACGGAAGAGTAAATATCCTTT 58.822 36.000 0.00 0.00 0.00 3.11
563 564 5.741011 TGCAACGGAAGAGTAAATATCCTT 58.259 37.500 0.00 0.00 0.00 3.36
564 565 5.353394 TGCAACGGAAGAGTAAATATCCT 57.647 39.130 0.00 0.00 0.00 3.24
565 566 5.220796 GGTTGCAACGGAAGAGTAAATATCC 60.221 44.000 22.67 0.00 0.00 2.59
566 567 5.585047 AGGTTGCAACGGAAGAGTAAATATC 59.415 40.000 22.67 3.58 0.00 1.63
567 568 5.354234 CAGGTTGCAACGGAAGAGTAAATAT 59.646 40.000 22.67 0.00 0.00 1.28
568 569 4.693566 CAGGTTGCAACGGAAGAGTAAATA 59.306 41.667 22.67 0.00 0.00 1.40
569 570 3.502211 CAGGTTGCAACGGAAGAGTAAAT 59.498 43.478 22.67 0.00 0.00 1.40
570 571 2.875933 CAGGTTGCAACGGAAGAGTAAA 59.124 45.455 22.67 0.00 0.00 2.01
571 572 2.489971 CAGGTTGCAACGGAAGAGTAA 58.510 47.619 22.67 0.00 0.00 2.24
572 573 1.876416 GCAGGTTGCAACGGAAGAGTA 60.876 52.381 22.67 0.00 44.26 2.59
573 574 1.166531 GCAGGTTGCAACGGAAGAGT 61.167 55.000 22.67 0.00 44.26 3.24
574 575 1.576421 GCAGGTTGCAACGGAAGAG 59.424 57.895 22.67 9.74 44.26 2.85
575 576 3.744559 GCAGGTTGCAACGGAAGA 58.255 55.556 22.67 0.00 44.26 2.87
587 588 2.762969 TAGCAAACATGCCGGCAGGT 62.763 55.000 38.92 38.92 43.10 4.00
588 589 1.996786 CTAGCAAACATGCCGGCAGG 61.997 60.000 37.40 37.40 41.62 4.85
589 590 1.308069 ACTAGCAAACATGCCGGCAG 61.308 55.000 35.36 26.66 34.90 4.85
590 591 1.303236 ACTAGCAAACATGCCGGCA 60.303 52.632 34.80 34.80 34.90 5.69
591 592 1.137404 CACTAGCAAACATGCCGGC 59.863 57.895 22.73 22.73 34.90 6.13
592 593 1.382522 ATCACTAGCAAACATGCCGG 58.617 50.000 0.00 0.00 34.90 6.13
593 594 4.818534 ATTATCACTAGCAAACATGCCG 57.181 40.909 0.00 0.00 34.90 5.69
594 595 8.925161 TTTAAATTATCACTAGCAAACATGCC 57.075 30.769 0.00 0.00 34.90 4.40
618 619 0.618981 TTTGGGCCCAAACCGTTTTT 59.381 45.000 40.46 0.00 40.51 1.94
619 620 0.618981 TTTTGGGCCCAAACCGTTTT 59.381 45.000 43.11 0.00 44.39 2.43
620 621 0.107606 GTTTTGGGCCCAAACCGTTT 60.108 50.000 43.11 0.00 44.39 3.60
621 622 0.978667 AGTTTTGGGCCCAAACCGTT 60.979 50.000 43.11 27.05 44.39 4.44
622 623 1.382009 AGTTTTGGGCCCAAACCGT 60.382 52.632 43.11 28.95 44.39 4.83
623 624 1.068921 CAGTTTTGGGCCCAAACCG 59.931 57.895 43.11 30.49 44.39 4.44
624 625 0.544223 AACAGTTTTGGGCCCAAACC 59.456 50.000 43.11 37.44 44.39 3.27
625 626 1.208293 TCAACAGTTTTGGGCCCAAAC 59.792 47.619 43.11 34.65 44.39 2.93
626 627 1.573108 TCAACAGTTTTGGGCCCAAA 58.427 45.000 40.46 40.46 43.23 3.28
627 628 1.799933 ATCAACAGTTTTGGGCCCAA 58.200 45.000 34.07 34.07 0.00 4.12
628 629 1.799933 AATCAACAGTTTTGGGCCCA 58.200 45.000 24.45 24.45 0.00 5.36
629 630 4.344359 TTTAATCAACAGTTTTGGGCCC 57.656 40.909 17.59 17.59 0.00 5.80
649 650 2.160813 ACGCGACTGTTTGTGTCTTTTT 59.839 40.909 15.93 0.00 32.70 1.94
650 651 1.735571 ACGCGACTGTTTGTGTCTTTT 59.264 42.857 15.93 0.00 32.70 2.27
651 652 1.062002 CACGCGACTGTTTGTGTCTTT 59.938 47.619 15.93 0.00 32.70 2.52
652 653 0.650512 CACGCGACTGTTTGTGTCTT 59.349 50.000 15.93 0.00 32.70 3.01
653 654 1.151777 CCACGCGACTGTTTGTGTCT 61.152 55.000 15.93 0.00 32.70 3.41
654 655 1.275657 CCACGCGACTGTTTGTGTC 59.724 57.895 15.93 0.00 0.00 3.67
655 656 2.177580 CCCACGCGACTGTTTGTGT 61.178 57.895 15.93 2.00 0.00 3.72
656 657 2.631428 CCCACGCGACTGTTTGTG 59.369 61.111 15.93 0.00 0.00 3.33
657 658 3.276846 GCCCACGCGACTGTTTGT 61.277 61.111 15.93 0.00 0.00 2.83
658 659 4.025401 GGCCCACGCGACTGTTTG 62.025 66.667 15.93 0.00 35.02 2.93
694 695 4.604050 TGAGATAGAGCATAGAGGTACCCT 59.396 45.833 8.74 8.20 36.03 4.34
695 696 4.703093 GTGAGATAGAGCATAGAGGTACCC 59.297 50.000 8.74 0.00 0.00 3.69
696 697 4.703093 GGTGAGATAGAGCATAGAGGTACC 59.297 50.000 2.73 2.73 0.00 3.34
697 698 4.393680 CGGTGAGATAGAGCATAGAGGTAC 59.606 50.000 0.00 0.00 0.00 3.34
698 699 4.580868 CGGTGAGATAGAGCATAGAGGTA 58.419 47.826 0.00 0.00 0.00 3.08
699 700 3.417101 CGGTGAGATAGAGCATAGAGGT 58.583 50.000 0.00 0.00 0.00 3.85
700 701 2.163412 GCGGTGAGATAGAGCATAGAGG 59.837 54.545 0.00 0.00 0.00 3.69
701 702 2.163412 GGCGGTGAGATAGAGCATAGAG 59.837 54.545 0.00 0.00 0.00 2.43
702 703 2.163509 GGCGGTGAGATAGAGCATAGA 58.836 52.381 0.00 0.00 0.00 1.98
703 704 1.135546 CGGCGGTGAGATAGAGCATAG 60.136 57.143 0.00 0.00 0.00 2.23
704 705 0.881796 CGGCGGTGAGATAGAGCATA 59.118 55.000 0.00 0.00 0.00 3.14
705 706 1.662608 CGGCGGTGAGATAGAGCAT 59.337 57.895 0.00 0.00 0.00 3.79
706 707 3.120105 CGGCGGTGAGATAGAGCA 58.880 61.111 0.00 0.00 0.00 4.26
707 708 2.355244 GCGGCGGTGAGATAGAGC 60.355 66.667 9.78 0.00 0.00 4.09
708 709 2.336809 GGCGGCGGTGAGATAGAG 59.663 66.667 9.78 0.00 0.00 2.43
709 710 3.592814 CGGCGGCGGTGAGATAGA 61.593 66.667 25.36 0.00 0.00 1.98
728 729 2.624674 CTAGGGATTTGGCGGTGGGG 62.625 65.000 0.00 0.00 0.00 4.96
729 730 1.152963 CTAGGGATTTGGCGGTGGG 60.153 63.158 0.00 0.00 0.00 4.61
730 731 0.463833 GACTAGGGATTTGGCGGTGG 60.464 60.000 0.00 0.00 0.00 4.61
731 732 0.541863 AGACTAGGGATTTGGCGGTG 59.458 55.000 0.00 0.00 0.00 4.94
732 733 0.831307 GAGACTAGGGATTTGGCGGT 59.169 55.000 0.00 0.00 0.00 5.68
733 734 0.830648 TGAGACTAGGGATTTGGCGG 59.169 55.000 0.00 0.00 0.00 6.13
734 735 1.802880 CGTGAGACTAGGGATTTGGCG 60.803 57.143 0.00 0.00 0.00 5.69
735 736 1.941325 CGTGAGACTAGGGATTTGGC 58.059 55.000 0.00 0.00 0.00 4.52
736 737 1.482593 AGCGTGAGACTAGGGATTTGG 59.517 52.381 0.00 0.00 0.00 3.28
737 738 2.482142 GGAGCGTGAGACTAGGGATTTG 60.482 54.545 0.00 0.00 0.00 2.32
738 739 1.757699 GGAGCGTGAGACTAGGGATTT 59.242 52.381 0.00 0.00 0.00 2.17
739 740 1.404843 GGAGCGTGAGACTAGGGATT 58.595 55.000 0.00 0.00 0.00 3.01
740 741 0.468400 GGGAGCGTGAGACTAGGGAT 60.468 60.000 0.00 0.00 0.00 3.85
741 742 1.076923 GGGAGCGTGAGACTAGGGA 60.077 63.158 0.00 0.00 0.00 4.20
742 743 1.076632 AGGGAGCGTGAGACTAGGG 60.077 63.158 0.00 0.00 0.00 3.53
743 744 2.010582 GCAGGGAGCGTGAGACTAGG 62.011 65.000 0.00 0.00 0.00 3.02
744 745 1.435515 GCAGGGAGCGTGAGACTAG 59.564 63.158 0.00 0.00 0.00 2.57
745 746 3.604629 GCAGGGAGCGTGAGACTA 58.395 61.111 0.00 0.00 0.00 2.59
772 773 1.649271 GGTGAGGAGGCATTGGGGAT 61.649 60.000 0.00 0.00 0.00 3.85
781 782 2.413765 GATCGACGGTGAGGAGGC 59.586 66.667 0.00 0.00 0.00 4.70
784 785 0.809385 GAAGTGATCGACGGTGAGGA 59.191 55.000 0.00 0.00 0.00 3.71
786 787 0.179134 GGGAAGTGATCGACGGTGAG 60.179 60.000 0.00 0.00 0.00 3.51
787 788 0.896479 TGGGAAGTGATCGACGGTGA 60.896 55.000 0.00 0.00 0.00 4.02
789 790 1.590147 GTGGGAAGTGATCGACGGT 59.410 57.895 0.00 0.00 0.00 4.83
796 797 4.778143 GCGGCGGTGGGAAGTGAT 62.778 66.667 9.78 0.00 0.00 3.06
854 857 3.450115 GAGTGGTCGACGGGGAGG 61.450 72.222 9.92 0.00 0.00 4.30
858 861 3.650298 TAGGGGAGTGGTCGACGGG 62.650 68.421 9.92 0.00 0.00 5.28
860 863 2.413142 GGTAGGGGAGTGGTCGACG 61.413 68.421 9.92 0.00 0.00 5.12
873 876 4.475444 TGGGGAGAGCGGGGTAGG 62.475 72.222 0.00 0.00 0.00 3.18
931 934 3.119096 GGCAGGGAAGACGTTCGC 61.119 66.667 0.00 0.00 44.18 4.70
932 935 2.809601 CGGCAGGGAAGACGTTCG 60.810 66.667 0.00 0.00 34.68 3.95
933 936 3.119096 GCGGCAGGGAAGACGTTC 61.119 66.667 0.00 0.00 43.41 3.95
934 937 3.591254 GAGCGGCAGGGAAGACGTT 62.591 63.158 1.45 0.00 43.41 3.99
935 938 4.070552 GAGCGGCAGGGAAGACGT 62.071 66.667 1.45 0.00 43.41 4.34
979 1008 0.035152 ATTCCTGCGATCTTGTGGCA 60.035 50.000 0.00 0.00 39.39 4.92
1003 1058 2.960129 GGATACGCCAGCGAACGG 60.960 66.667 20.32 0.00 42.83 4.44
1068 1126 2.807676 CTGGAGCCAGGGTAAAACATT 58.192 47.619 8.69 0.00 40.17 2.71
1128 1195 1.271856 TGATGCGGGAGTAACCTTCA 58.728 50.000 0.00 0.00 38.98 3.02
1155 1222 5.256474 GTCTTGATTCTCTTTCCATTGGGA 58.744 41.667 2.09 0.00 43.03 4.37
1177 1244 0.890996 CCAGCTTTGAAAGAGCCGGT 60.891 55.000 9.48 0.00 41.03 5.28
1178 1245 0.606401 TCCAGCTTTGAAAGAGCCGG 60.606 55.000 9.48 0.00 41.03 6.13
1180 1247 1.172175 CCTCCAGCTTTGAAAGAGCC 58.828 55.000 9.48 0.00 41.03 4.70
1256 1323 7.181569 TCAAGGGAAAGAAAAACAGAAATGT 57.818 32.000 0.00 0.00 0.00 2.71
1260 1327 6.040842 CCTGATCAAGGGAAAGAAAAACAGAA 59.959 38.462 0.00 0.00 43.15 3.02
1274 1341 1.747355 GTGCAACATCCTGATCAAGGG 59.253 52.381 0.00 0.00 41.49 3.95
1313 1389 6.306987 ACCTCACCAATGAAACTAAAGTGAT 58.693 36.000 0.00 0.00 33.30 3.06
1317 1393 5.772521 CCAACCTCACCAATGAAACTAAAG 58.227 41.667 0.00 0.00 33.30 1.85
1344 1420 2.203015 ACGCGTGCAGGTTCTTGT 60.203 55.556 12.93 0.00 0.00 3.16
1360 1436 2.359900 AGATGCTTTGATTCCACGGAC 58.640 47.619 0.00 0.00 0.00 4.79
1367 1443 9.643693 TTTTATGGAAAGAAGATGCTTTGATTC 57.356 29.630 0.00 0.00 38.16 2.52
1391 1467 4.283467 GGAGACCAAAACCATAGCCTTTTT 59.717 41.667 0.00 0.00 0.00 1.94
1400 1476 0.476771 ACGGTGGAGACCAAAACCAT 59.523 50.000 0.00 0.00 43.33 3.55
1406 1488 1.418264 TCATGAAACGGTGGAGACCAA 59.582 47.619 0.00 0.00 43.33 3.67
1412 1494 4.065088 CTCTCTTTTCATGAAACGGTGGA 58.935 43.478 20.35 14.90 0.00 4.02
1415 1497 2.814336 GCCTCTCTTTTCATGAAACGGT 59.186 45.455 20.35 0.00 0.00 4.83
1436 1518 2.500910 AGATGCTCTGACTTCTCAAGGG 59.499 50.000 0.00 0.00 0.00 3.95
1533 1618 5.297776 CAGATGCTCACTTAAATTAGGTGGG 59.702 44.000 14.00 12.25 39.08 4.61
1537 1622 6.599244 TGGTTCAGATGCTCACTTAAATTAGG 59.401 38.462 0.00 0.00 0.00 2.69
1572 1657 2.672651 TCGACGCCCACCTTCGTA 60.673 61.111 0.00 0.00 39.22 3.43
1680 1765 0.929244 CAATCCCCTCCTTCATGGGT 59.071 55.000 0.00 0.00 41.82 4.51
1703 1788 5.768164 TCTTGTATCTGTATGGCATCGTCTA 59.232 40.000 1.65 0.00 0.00 2.59
1706 1791 4.099419 TGTCTTGTATCTGTATGGCATCGT 59.901 41.667 1.65 0.00 0.00 3.73
1709 1794 5.072193 TCCATGTCTTGTATCTGTATGGCAT 59.928 40.000 4.88 4.88 34.92 4.40
1760 1845 3.928727 TCAAGTCGGTGTAGACGAAAT 57.071 42.857 0.00 0.00 45.26 2.17
1806 1921 4.475135 GAGACGGCTTCCCCTGCC 62.475 72.222 0.00 0.00 46.42 4.85
1807 1922 1.614241 TTAGAGACGGCTTCCCCTGC 61.614 60.000 0.00 0.00 0.00 4.85
1808 1923 0.461961 CTTAGAGACGGCTTCCCCTG 59.538 60.000 0.00 0.00 0.00 4.45
1809 1924 0.688087 CCTTAGAGACGGCTTCCCCT 60.688 60.000 0.00 0.00 0.00 4.79
1810 1925 0.976590 ACCTTAGAGACGGCTTCCCC 60.977 60.000 0.00 0.00 0.00 4.81
1811 1926 0.903236 AACCTTAGAGACGGCTTCCC 59.097 55.000 0.00 0.00 0.00 3.97
1812 1927 2.494870 TGTAACCTTAGAGACGGCTTCC 59.505 50.000 0.00 0.00 0.00 3.46
1820 1935 2.159099 CGCAGCCATGTAACCTTAGAGA 60.159 50.000 0.00 0.00 0.00 3.10
1822 1937 1.828595 TCGCAGCCATGTAACCTTAGA 59.171 47.619 0.00 0.00 0.00 2.10
1825 1940 0.036164 TGTCGCAGCCATGTAACCTT 59.964 50.000 0.00 0.00 0.00 3.50
1833 1948 1.601759 AAGCAAGTGTCGCAGCCAT 60.602 52.632 0.00 0.00 0.00 4.40
1857 1972 1.068588 TGGAGATCAAACCTATCCGCG 59.931 52.381 0.00 0.00 32.47 6.46
2079 2196 2.423926 TGAGCTCGTTCAGAACAGAC 57.576 50.000 13.82 1.61 0.00 3.51
2165 2283 3.118408 TGCATAAATTCAGCTACCGACCT 60.118 43.478 0.00 0.00 0.00 3.85
2180 2298 4.322650 GCCCAAGTGATTTCCTTGCATAAA 60.323 41.667 0.00 0.00 38.36 1.40
2193 2311 0.478072 TGACCAAGTGCCCAAGTGAT 59.522 50.000 0.00 0.00 0.00 3.06
2295 2417 9.561069 AACACTAACTTCTTATATATGCCAAGG 57.439 33.333 0.00 0.00 0.00 3.61
2328 2450 6.380190 GGCTTGCATGATCAATAAGAGATTC 58.620 40.000 16.53 3.55 0.00 2.52
2400 2557 2.061028 CTGCAAATTGGACGGCTTTTC 58.939 47.619 0.00 0.00 0.00 2.29
2407 2564 1.267806 ACTGAAGCTGCAAATTGGACG 59.732 47.619 1.02 0.00 0.00 4.79
2432 2589 7.981102 AACCTTGGATAAGTTTCTGTAACTC 57.019 36.000 0.00 0.00 46.34 3.01
2439 2596 7.611855 CAGAACCATAACCTTGGATAAGTTTCT 59.388 37.037 0.00 0.00 39.25 2.52
2446 2603 5.367945 GGTCAGAACCATAACCTTGGATA 57.632 43.478 0.00 0.00 45.68 2.59
2495 2656 4.415881 ACACCAATCTGTACAGTTCACA 57.584 40.909 21.99 3.12 0.00 3.58
2531 2692 0.760567 AGTATGGCGATGGGAGCTCA 60.761 55.000 17.19 0.00 34.52 4.26
2544 2705 1.442769 GCCATGATGCCGTAGTATGG 58.557 55.000 3.80 3.80 40.91 2.74
2574 2735 2.051345 GCAACCAGCAAACGACCG 60.051 61.111 0.00 0.00 44.79 4.79
2622 2861 1.076923 GCTGGTCTACCTCCTCCGA 60.077 63.158 0.02 0.00 36.82 4.55
2643 2882 1.546589 CCGCCTAGGTGTTGGTGGTA 61.547 60.000 20.80 0.00 46.03 3.25
2657 2896 3.905678 CGATTCTCCTCGCCGCCT 61.906 66.667 0.00 0.00 0.00 5.52
2658 2897 4.208686 ACGATTCTCCTCGCCGCC 62.209 66.667 0.00 0.00 42.35 6.13
2660 2899 2.026301 GGACGATTCTCCTCGCCG 59.974 66.667 0.00 0.00 42.35 6.46
2664 2903 0.179070 GGCCTTGGACGATTCTCCTC 60.179 60.000 0.00 0.00 0.00 3.71
2670 2909 0.678048 GCTTCAGGCCTTGGACGATT 60.678 55.000 0.00 0.00 34.27 3.34
2672 2911 2.172483 GAGCTTCAGGCCTTGGACGA 62.172 60.000 0.00 0.00 43.05 4.20
2692 2931 4.479993 GCTGGCGAGGACTGGCAT 62.480 66.667 8.54 0.00 41.40 4.40
2697 2936 3.842923 CGGATGCTGGCGAGGACT 61.843 66.667 0.00 0.00 0.00 3.85
2746 2992 6.974795 AGTCTTAATAATTTCTTCAGGGGCT 58.025 36.000 0.00 0.00 0.00 5.19
2770 3016 7.392953 TGAATTCTTATGGTGCTTCAACATGTA 59.607 33.333 7.05 0.00 42.22 2.29
2778 3030 6.932356 TCTCATGAATTCTTATGGTGCTTC 57.068 37.500 7.05 0.00 0.00 3.86
2797 3049 3.258372 AGCCTTACGTCTCACAAATCTCA 59.742 43.478 0.00 0.00 0.00 3.27
2823 3075 3.855255 AAATTTCTGGTTTTGTGGGGG 57.145 42.857 0.00 0.00 0.00 5.40
2834 3086 6.741358 GGTAAGATTTCGTCGAAAATTTCTGG 59.259 38.462 23.11 0.00 35.11 3.86
2836 3088 6.531439 CGGTAAGATTTCGTCGAAAATTTCT 58.469 36.000 23.11 17.97 35.11 2.52
2838 3090 5.084055 GCGGTAAGATTTCGTCGAAAATTT 58.916 37.500 23.11 20.15 35.11 1.82
2840 3092 3.063045 GGCGGTAAGATTTCGTCGAAAAT 59.937 43.478 23.11 14.77 35.11 1.82
2845 3097 1.915093 CGGCGGTAAGATTTCGTCG 59.085 57.895 0.00 0.00 44.92 5.12
2846 3098 1.149964 CCCGGCGGTAAGATTTCGTC 61.150 60.000 26.32 0.00 0.00 4.20
2847 3099 1.153509 CCCGGCGGTAAGATTTCGT 60.154 57.895 26.32 0.00 0.00 3.85
2849 3101 2.184830 GGCCCGGCGGTAAGATTTC 61.185 63.158 26.32 2.91 0.00 2.17
2965 3227 6.364165 GTGTGGACTTTCATTCAATCACAATG 59.636 38.462 0.00 0.00 35.97 2.82
3025 3287 0.462581 TCCAAGCTTAGGCATCTGCG 60.463 55.000 0.00 0.00 43.26 5.18
3076 3338 4.081087 TCACTTTCAGATGGGTTACTAGGC 60.081 45.833 0.00 0.00 0.00 3.93
3084 3346 2.719739 CATGCTCACTTTCAGATGGGT 58.280 47.619 0.00 0.00 0.00 4.51
3086 3348 2.355132 GAGCATGCTCACTTTCAGATGG 59.645 50.000 36.94 0.00 42.31 3.51
3090 3352 4.934001 TCTTTAGAGCATGCTCACTTTCAG 59.066 41.667 40.91 27.58 44.99 3.02
3094 3356 7.065563 CACTTATTCTTTAGAGCATGCTCACTT 59.934 37.037 40.91 26.98 44.99 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.