Multiple sequence alignment - TraesCS1B01G427500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G427500 chr1B 100.000 2945 0 0 1 2945 652926906 652923962 0.000000e+00 5439
1 TraesCS1B01G427500 chr1B 83.492 1048 112 30 1075 2072 653039779 653038743 0.000000e+00 920
2 TraesCS1B01G427500 chr1B 85.670 321 11 5 714 1009 653040204 653039894 3.690000e-79 305
3 TraesCS1B01G427500 chr1D 87.831 1701 112 40 619 2270 470312457 470310803 0.000000e+00 1906
4 TraesCS1B01G427500 chr1D 87.629 873 79 22 1066 1920 470339546 470338685 0.000000e+00 987
5 TraesCS1B01G427500 chr1D 86.970 660 63 19 2307 2945 470310679 470310022 0.000000e+00 721
6 TraesCS1B01G427500 chr1D 90.631 555 21 7 1 531 470313064 470312517 0.000000e+00 708
7 TraesCS1B01G427500 chr1D 82.692 416 24 20 619 1008 470340031 470339638 2.830000e-85 326
8 TraesCS1B01G427500 chr1D 85.938 192 20 5 229 418 470340802 470340616 6.440000e-47 198
9 TraesCS1B01G427500 chr1A 90.011 931 63 7 1406 2321 563989677 563988762 0.000000e+00 1177
10 TraesCS1B01G427500 chr1A 84.688 1058 100 31 1066 2072 564040819 564039773 0.000000e+00 1000
11 TraesCS1B01G427500 chr1A 90.176 397 26 6 2562 2945 563988184 563987788 3.390000e-139 505
12 TraesCS1B01G427500 chr1A 85.961 463 33 15 1 455 563990133 563989695 1.600000e-127 466
13 TraesCS1B01G427500 chr1A 91.855 221 16 2 2314 2532 563988404 563988184 1.030000e-79 307
14 TraesCS1B01G427500 chr1A 80.471 425 29 18 613 1009 564041325 564040927 2.890000e-70 276
15 TraesCS1B01G427500 chr1A 83.732 209 19 8 229 430 564042064 564041864 1.800000e-42 183
16 TraesCS1B01G427500 chr3A 85.043 234 24 6 2719 2945 485688908 485688679 8.210000e-56 228
17 TraesCS1B01G427500 chr5B 86.559 186 16 7 222 407 3901452 3901276 2.320000e-46 196
18 TraesCS1B01G427500 chr7B 85.263 190 19 7 222 411 710079694 710079514 1.390000e-43 187
19 TraesCS1B01G427500 chr6B 85.484 186 18 7 222 407 502022514 502022338 5.010000e-43 185
20 TraesCS1B01G427500 chr3D 81.545 233 32 7 2719 2945 364265410 364265183 6.480000e-42 182


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G427500 chr1B 652923962 652926906 2944 True 5439.000000 5439 100.000000 1 2945 1 chr1B.!!$R1 2944
1 TraesCS1B01G427500 chr1B 653038743 653040204 1461 True 612.500000 920 84.581000 714 2072 2 chr1B.!!$R2 1358
2 TraesCS1B01G427500 chr1D 470310022 470313064 3042 True 1111.666667 1906 88.477333 1 2945 3 chr1D.!!$R1 2944
3 TraesCS1B01G427500 chr1D 470338685 470340802 2117 True 503.666667 987 85.419667 229 1920 3 chr1D.!!$R2 1691
4 TraesCS1B01G427500 chr1A 563987788 563990133 2345 True 613.750000 1177 89.500750 1 2945 4 chr1A.!!$R1 2944
5 TraesCS1B01G427500 chr1A 564039773 564042064 2291 True 486.333333 1000 82.963667 229 2072 3 chr1A.!!$R2 1843

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
994 1520 0.107312 AGCTTGCTCGGCAGATCATT 60.107 50.0 0.0 0.0 40.61 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2836 3895 0.469144 ACAGGGGTTTGCCGTCAAAT 60.469 50.0 0.0 0.0 43.32 2.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 4.106197 AGCGCGTTCAAAGATAAGAGTAG 58.894 43.478 8.43 0.00 0.00 2.57
57 58 4.381612 GGACCAACGTTGAGAGATATGTCA 60.382 45.833 29.35 0.00 0.00 3.58
90 91 0.329596 GATGGGAGCAAGTGGGTCTT 59.670 55.000 0.00 0.00 43.58 3.01
96 97 0.535102 AGCAAGTGGGTCTTCGTTGG 60.535 55.000 0.00 0.00 33.63 3.77
100 101 0.321653 AGTGGGTCTTCGTTGGATGC 60.322 55.000 0.00 0.00 0.00 3.91
132 137 0.245539 GCATGCATGGCTTGTGAAGT 59.754 50.000 27.34 0.00 36.33 3.01
138 145 4.081406 TGCATGGCTTGTGAAGTAAATCT 58.919 39.130 2.12 0.00 0.00 2.40
312 334 4.850386 ACTTAACTAATCAAGGTCCAGGGT 59.150 41.667 0.00 0.00 0.00 4.34
313 335 5.045797 ACTTAACTAATCAAGGTCCAGGGTC 60.046 44.000 0.00 0.00 0.00 4.46
314 336 2.197465 ACTAATCAAGGTCCAGGGTCC 58.803 52.381 0.00 0.00 0.00 4.46
315 337 2.196595 CTAATCAAGGTCCAGGGTCCA 58.803 52.381 4.44 0.00 0.00 4.02
368 390 3.311167 TGGGGATGTTGTATGGGAATG 57.689 47.619 0.00 0.00 0.00 2.67
519 900 5.638596 TGAAAGTCTGCAACTCTATACGA 57.361 39.130 0.00 0.00 37.17 3.43
531 912 4.592942 ACTCTATACGACCAACAGGTACA 58.407 43.478 0.00 0.00 35.25 2.90
533 914 5.125097 ACTCTATACGACCAACAGGTACAAG 59.875 44.000 0.00 0.00 35.25 3.16
534 915 5.012239 TCTATACGACCAACAGGTACAAGT 58.988 41.667 0.00 0.00 35.25 3.16
538 919 3.243636 ACGACCAACAGGTACAAGTACAG 60.244 47.826 12.00 6.61 37.78 2.74
539 920 3.660865 GACCAACAGGTACAAGTACAGG 58.339 50.000 12.00 5.97 37.78 4.00
540 921 3.311091 ACCAACAGGTACAAGTACAGGA 58.689 45.455 12.00 0.00 37.78 3.86
541 922 3.908103 ACCAACAGGTACAAGTACAGGAT 59.092 43.478 12.00 0.00 37.78 3.24
546 940 7.065803 CCAACAGGTACAAGTACAGGATATTTG 59.934 40.741 12.00 5.39 37.78 2.32
551 945 9.227777 AGGTACAAGTACAGGATATTTGTTTTC 57.772 33.333 12.00 0.00 37.78 2.29
555 949 8.576442 ACAAGTACAGGATATTTGTTTTCTTGG 58.424 33.333 20.54 12.44 36.31 3.61
560 954 8.133024 ACAGGATATTTGTTTTCTTGGCAATA 57.867 30.769 0.00 0.00 0.00 1.90
616 1102 6.398918 AGCTACTACTAGAACAAATGTGTGG 58.601 40.000 0.00 0.00 38.27 4.17
617 1103 5.581085 GCTACTACTAGAACAAATGTGTGGG 59.419 44.000 0.00 0.00 38.27 4.61
663 1156 4.707105 CTGACCCATGCATCACATTACTA 58.293 43.478 0.00 0.00 36.64 1.82
665 1158 4.164030 TGACCCATGCATCACATTACTACT 59.836 41.667 0.00 0.00 36.64 2.57
666 1159 4.708177 ACCCATGCATCACATTACTACTC 58.292 43.478 0.00 0.00 36.64 2.59
667 1160 4.410228 ACCCATGCATCACATTACTACTCT 59.590 41.667 0.00 0.00 36.64 3.24
668 1161 5.602561 ACCCATGCATCACATTACTACTCTA 59.397 40.000 0.00 0.00 36.64 2.43
669 1162 5.928839 CCCATGCATCACATTACTACTCTAC 59.071 44.000 0.00 0.00 36.64 2.59
670 1163 5.631096 CCATGCATCACATTACTACTCTACG 59.369 44.000 0.00 0.00 36.64 3.51
677 1170 7.312657 TCACATTACTACTCTACGTGGTTAG 57.687 40.000 0.00 3.58 38.40 2.34
696 1194 0.663153 GCCATGCGATTAGTCAACCC 59.337 55.000 0.00 0.00 0.00 4.11
697 1195 1.747206 GCCATGCGATTAGTCAACCCT 60.747 52.381 0.00 0.00 0.00 4.34
698 1196 2.484770 GCCATGCGATTAGTCAACCCTA 60.485 50.000 0.00 0.00 0.00 3.53
699 1197 3.393800 CCATGCGATTAGTCAACCCTAG 58.606 50.000 0.00 0.00 0.00 3.02
700 1198 3.181465 CCATGCGATTAGTCAACCCTAGT 60.181 47.826 0.00 0.00 0.00 2.57
701 1199 3.795623 TGCGATTAGTCAACCCTAGTC 57.204 47.619 0.00 0.00 0.00 2.59
702 1200 2.429610 TGCGATTAGTCAACCCTAGTCC 59.570 50.000 0.00 0.00 0.00 3.85
779 1281 1.707451 CACATGCGCACGTACGAAT 59.293 52.632 24.41 3.50 34.06 3.34
780 1282 0.917939 CACATGCGCACGTACGAATA 59.082 50.000 24.41 3.63 34.06 1.75
840 1342 1.516821 CGGCGGTTGAATTGCATGG 60.517 57.895 0.00 0.00 0.00 3.66
859 1361 5.064834 GCATGGGCTTAAGTTTACACTACTC 59.935 44.000 4.02 0.00 36.96 2.59
860 1362 4.813027 TGGGCTTAAGTTTACACTACTCG 58.187 43.478 4.02 0.00 30.68 4.18
861 1363 4.281688 TGGGCTTAAGTTTACACTACTCGT 59.718 41.667 4.02 0.00 30.68 4.18
862 1364 5.476599 TGGGCTTAAGTTTACACTACTCGTA 59.523 40.000 4.02 0.00 30.68 3.43
961 1487 3.414136 AACTGCCAGGCCGTGTCAA 62.414 57.895 9.62 0.00 0.00 3.18
994 1520 0.107312 AGCTTGCTCGGCAGATCATT 60.107 50.000 0.00 0.00 40.61 2.57
1252 1856 2.444895 GGAGCCGAGGAGTGGGAT 60.445 66.667 0.00 0.00 0.00 3.85
1607 2214 2.658707 GAGCACGACAACGGTCAGC 61.659 63.158 0.00 0.00 44.54 4.26
1684 2300 3.584868 AAGCAGTACCGCCACCGAC 62.585 63.158 0.00 0.00 36.29 4.79
1696 2312 1.497278 CACCGACCATGCAAGAACG 59.503 57.895 0.00 0.00 0.00 3.95
1734 2350 1.676006 GGCGGTGTATGGAAATGGAAG 59.324 52.381 0.00 0.00 0.00 3.46
1735 2351 2.639065 GCGGTGTATGGAAATGGAAGA 58.361 47.619 0.00 0.00 0.00 2.87
1736 2352 3.013921 GCGGTGTATGGAAATGGAAGAA 58.986 45.455 0.00 0.00 0.00 2.52
1849 2468 3.291584 AGGAGCTGTGAATCGAGTGATA 58.708 45.455 0.00 0.00 33.40 2.15
2172 2847 0.852136 GCAACACACCGAATTTGCAC 59.148 50.000 0.40 0.00 43.16 4.57
2173 2848 1.119635 CAACACACCGAATTTGCACG 58.880 50.000 0.00 0.00 0.00 5.34
2174 2849 0.593773 AACACACCGAATTTGCACGC 60.594 50.000 0.00 0.00 0.00 5.34
2175 2850 1.009108 CACACCGAATTTGCACGCA 60.009 52.632 0.00 0.00 0.00 5.24
2187 2862 2.177394 TGCACGCATAGTTCCTTCAA 57.823 45.000 0.00 0.00 0.00 2.69
2240 2915 0.613777 GACCTTCCCTTGGTGACGAT 59.386 55.000 0.00 0.00 38.03 3.73
2303 2978 6.307318 CAGACGACCTAATTTACACACTACAC 59.693 42.308 0.00 0.00 0.00 2.90
2322 3363 2.987149 CACGAAAATCACACTAGCTCGT 59.013 45.455 0.00 0.00 38.48 4.18
2338 3379 2.190981 CTCGTCTTACATGGCCGTAAC 58.809 52.381 0.00 0.00 0.00 2.50
2353 3394 1.201877 CGTAACGCGGGATGTGAAAAG 60.202 52.381 12.47 0.00 36.85 2.27
2402 3443 3.221771 TCACAATGGTAATGCCCATAGC 58.778 45.455 0.00 0.00 44.55 2.97
2440 3481 2.795231 ATTCTCATGGACTGTGGTGG 57.205 50.000 0.00 0.00 0.00 4.61
2571 3623 6.666113 TCCACCAACTAGTGTACATAAGATGA 59.334 38.462 15.06 0.00 35.93 2.92
2662 3718 4.400251 ACTTGCAATGTGGACCATTCATAG 59.600 41.667 0.00 0.00 41.93 2.23
2687 3743 9.171877 AGCAAATGGTTTGAAATTTAAACTTCA 57.828 25.926 7.95 7.95 43.26 3.02
2775 3831 1.982395 CTGAGCCCACCTACGACCA 60.982 63.158 0.00 0.00 0.00 4.02
2836 3895 1.874739 CGCCAGGTAACGGTCAAAGAA 60.875 52.381 0.00 0.00 46.39 2.52
2853 3917 0.966179 GAATTTGACGGCAAACCCCT 59.034 50.000 20.83 3.68 45.94 4.79
2898 3963 1.137479 CGCACGGTAGAGGGGAAAATA 59.863 52.381 0.00 0.00 0.00 1.40
2900 3965 3.743269 CGCACGGTAGAGGGGAAAATAAT 60.743 47.826 0.00 0.00 0.00 1.28
2920 3985 2.180017 CTGCAAATGAGCGTGGGC 59.820 61.111 0.00 0.00 37.31 5.36
2930 3995 0.884704 GAGCGTGGGCAAAACTGAGA 60.885 55.000 0.00 0.00 43.41 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 4.113354 GACATATCTCTCAACGTTGGTCC 58.887 47.826 27.02 6.21 0.00 4.46
57 58 2.424601 CTCCCATCATTGCGTTCACATT 59.575 45.455 0.00 0.00 0.00 2.71
110 111 0.038067 TCACAAGCCATGCATGCAAC 60.038 50.000 26.68 17.04 29.81 4.17
198 205 3.507233 GGTCTGATTTGAATCCAGTTGCA 59.493 43.478 1.56 0.00 34.50 4.08
312 334 7.775053 AAACAATAAGCTAAAACATCCTGGA 57.225 32.000 0.00 0.00 0.00 3.86
313 335 7.331687 CCAAAACAATAAGCTAAAACATCCTGG 59.668 37.037 0.00 0.00 0.00 4.45
314 336 8.087750 TCCAAAACAATAAGCTAAAACATCCTG 58.912 33.333 0.00 0.00 0.00 3.86
315 337 8.189119 TCCAAAACAATAAGCTAAAACATCCT 57.811 30.769 0.00 0.00 0.00 3.24
504 885 3.845178 TGTTGGTCGTATAGAGTTGCAG 58.155 45.455 0.00 0.00 0.00 4.41
531 912 7.232534 TGCCAAGAAAACAAATATCCTGTACTT 59.767 33.333 0.00 0.00 0.00 2.24
533 914 6.919721 TGCCAAGAAAACAAATATCCTGTAC 58.080 36.000 0.00 0.00 0.00 2.90
534 915 7.531857 TTGCCAAGAAAACAAATATCCTGTA 57.468 32.000 0.00 0.00 0.00 2.74
589 1005 9.587772 CACACATTTGTTCTAGTAGTAGCTTAT 57.412 33.333 0.00 0.00 31.66 1.73
590 1006 8.033038 CCACACATTTGTTCTAGTAGTAGCTTA 58.967 37.037 0.00 0.00 31.66 3.09
614 1100 4.007457 GCATTTCTGCTCTGCCCA 57.993 55.556 0.00 0.00 45.32 5.36
647 1134 6.142958 CACGTAGAGTAGTAATGTGATGCATG 59.857 42.308 2.46 0.00 37.96 4.06
677 1170 0.663153 GGGTTGACTAATCGCATGGC 59.337 55.000 0.00 0.00 0.00 4.40
702 1200 6.881602 GGATATGCTTTCTTTATCCCAGTAGG 59.118 42.308 0.00 0.00 32.61 3.18
712 1210 3.876914 CTGCACGGGATATGCTTTCTTTA 59.123 43.478 0.00 0.00 43.77 1.85
768 1266 2.214914 GGATGTTCGTATTCGTACGTGC 59.785 50.000 16.05 0.00 43.31 5.34
779 1281 3.681594 GCAGGAATTCAGGGATGTTCGTA 60.682 47.826 7.93 0.00 0.00 3.43
780 1282 2.941415 GCAGGAATTCAGGGATGTTCGT 60.941 50.000 7.93 0.00 0.00 3.85
840 1342 5.509622 CGTACGAGTAGTGTAAACTTAAGCC 59.490 44.000 10.44 0.00 0.00 4.35
859 1361 1.591248 GTTGCAATGCAGAACGTACG 58.409 50.000 15.01 15.01 40.61 3.67
860 1362 1.401018 GGGTTGCAATGCAGAACGTAC 60.401 52.381 8.31 2.20 40.61 3.67
861 1363 0.878416 GGGTTGCAATGCAGAACGTA 59.122 50.000 8.31 0.00 40.61 3.57
862 1364 1.106351 TGGGTTGCAATGCAGAACGT 61.106 50.000 8.31 0.00 40.61 3.99
935 1461 2.879907 CCTGGCAGTTGGCGATTG 59.120 61.111 14.43 0.00 46.16 2.67
977 1503 1.004185 CGAAATGATCTGCCGAGCAAG 60.004 52.381 0.00 0.00 39.28 4.01
979 1505 0.175531 TCGAAATGATCTGCCGAGCA 59.824 50.000 0.00 0.00 40.25 4.26
994 1520 9.691362 GGGGTTTATAACTTTATATACGTCGAA 57.309 33.333 0.00 0.00 32.08 3.71
1078 1670 0.036952 CCAGGATGTCGCTTGTGTCT 60.037 55.000 0.00 0.00 0.00 3.41
1234 1838 3.317436 ATCCCACTCCTCGGCTCCA 62.317 63.158 0.00 0.00 0.00 3.86
1237 1841 1.760086 CTCATCCCACTCCTCGGCT 60.760 63.158 0.00 0.00 0.00 5.52
1243 1847 1.145819 GAGCAGCTCATCCCACTCC 59.854 63.158 18.17 0.00 0.00 3.85
1374 1981 1.977293 GCCCCTGTAGCTCTTGGGAG 61.977 65.000 16.63 9.50 42.11 4.30
1375 1982 1.995626 GCCCCTGTAGCTCTTGGGA 60.996 63.158 16.63 0.00 42.11 4.37
1579 2186 2.033602 TCGTGCTCCAGGTCGAGA 59.966 61.111 0.00 0.00 30.97 4.04
1684 2300 1.787847 GTCGACCGTTCTTGCATGG 59.212 57.895 3.51 0.00 0.00 3.66
1696 2312 1.583967 CGTGAGATCAGCGTCGACC 60.584 63.158 10.58 2.76 0.00 4.79
1734 2350 1.137872 ACACCATCTGATCGGAGCTTC 59.862 52.381 10.61 0.00 0.00 3.86
1735 2351 1.137872 GACACCATCTGATCGGAGCTT 59.862 52.381 10.61 0.00 0.00 3.74
1736 2352 0.749649 GACACCATCTGATCGGAGCT 59.250 55.000 10.61 0.00 0.00 4.09
1819 2438 2.034376 ACAGCTCCTCCGACGTCT 59.966 61.111 14.70 0.00 0.00 4.18
1849 2468 1.912043 CCACCAATCTCCTCCAACTCT 59.088 52.381 0.00 0.00 0.00 3.24
1949 2610 9.693739 TCCATACACAAATTAACATACTCCAAT 57.306 29.630 0.00 0.00 0.00 3.16
1950 2611 9.693739 ATCCATACACAAATTAACATACTCCAA 57.306 29.630 0.00 0.00 0.00 3.53
1951 2612 9.119418 CATCCATACACAAATTAACATACTCCA 57.881 33.333 0.00 0.00 0.00 3.86
1952 2613 9.337396 TCATCCATACACAAATTAACATACTCC 57.663 33.333 0.00 0.00 0.00 3.85
2172 2847 3.861840 TCCTCTTTGAAGGAACTATGCG 58.138 45.455 0.00 0.00 42.56 4.73
2187 2862 3.586618 AGCTTTCAGATCACCTTCCTCTT 59.413 43.478 0.00 0.00 0.00 2.85
2218 2893 1.878102 CGTCACCAAGGGAAGGTCAAG 60.878 57.143 0.00 0.00 37.23 3.02
2303 2978 3.502920 AGACGAGCTAGTGTGATTTTCG 58.497 45.455 3.45 0.00 0.00 3.46
2322 3363 0.802994 CGCGTTACGGCCATGTAAGA 60.803 55.000 6.94 0.00 35.13 2.10
2338 3379 2.584791 CTTTTCTTTTCACATCCCGCG 58.415 47.619 0.00 0.00 0.00 6.46
2345 3386 5.380043 AGCAGAGATCCTTTTCTTTTCACA 58.620 37.500 0.00 0.00 0.00 3.58
2353 3394 9.727627 CATTTTGTATAAGCAGAGATCCTTTTC 57.272 33.333 0.00 0.00 0.00 2.29
2421 3462 1.988107 ACCACCACAGTCCATGAGAAT 59.012 47.619 0.00 0.00 0.00 2.40
2440 3481 5.909621 AGGCATATGCATATGGAAATGAC 57.090 39.130 36.01 21.73 44.36 3.06
2546 3598 6.666113 TCATCTTATGTACACTAGTTGGTGGA 59.334 38.462 0.00 0.00 41.09 4.02
2560 3612 6.038603 GCCTTTGCATTGAGTCATCTTATGTA 59.961 38.462 0.00 0.00 37.47 2.29
2662 3718 9.437045 CTGAAGTTTAAATTTCAAACCATTTGC 57.563 29.630 21.90 0.00 40.43 3.68
2775 3831 1.525995 CCCTTGTCAGTGGCAACGT 60.526 57.895 5.94 0.00 42.51 3.99
2836 3895 0.469144 ACAGGGGTTTGCCGTCAAAT 60.469 50.000 0.00 0.00 43.32 2.32
2853 3917 2.432510 CACCCTTACAAAAGCCCAAACA 59.567 45.455 0.00 0.00 0.00 2.83
2898 3963 1.200716 CCACGCTCATTTGCAGTCATT 59.799 47.619 0.00 0.00 0.00 2.57
2900 3965 1.236616 CCCACGCTCATTTGCAGTCA 61.237 55.000 0.00 0.00 0.00 3.41
2920 3985 6.376978 CATTGCTTAGTCCTTCTCAGTTTTG 58.623 40.000 0.00 0.00 0.00 2.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.