Multiple sequence alignment - TraesCS1B01G426400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G426400 chr1B 100.000 3689 0 0 1 3689 652458275 652461963 0.000000e+00 6813.0
1 TraesCS1B01G426400 chr1B 81.148 1464 226 33 1428 2874 652569911 652571341 0.000000e+00 1129.0
2 TraesCS1B01G426400 chr1B 77.726 642 100 26 977 1599 652485091 652485708 1.630000e-93 353.0
3 TraesCS1B01G426400 chr1B 79.866 149 16 7 2636 2773 652577097 652577242 3.030000e-16 97.1
4 TraesCS1B01G426400 chr1A 90.180 3676 197 78 122 3689 563685324 563688943 0.000000e+00 4638.0
5 TraesCS1B01G426400 chr1A 83.182 1540 199 33 1470 2984 563690274 563691778 0.000000e+00 1354.0
6 TraesCS1B01G426400 chr1A 83.333 1428 194 22 1468 2874 563765441 563766845 0.000000e+00 1279.0
7 TraesCS1B01G426400 chr1A 80.874 1464 237 32 1432 2874 563783580 563785021 0.000000e+00 1112.0
8 TraesCS1B01G426400 chr1A 84.716 916 120 13 1436 2347 563791354 563792253 0.000000e+00 898.0
9 TraesCS1B01G426400 chr1A 77.982 654 90 29 970 1599 563764604 563765227 9.740000e-96 361.0
10 TraesCS1B01G426400 chr1A 75.239 731 127 31 2343 3053 563799386 563800082 7.740000e-77 298.0
11 TraesCS1B01G426400 chr1A 98.039 51 0 1 54 103 563685219 563685269 1.830000e-13 87.9
12 TraesCS1B01G426400 chr1D 89.632 3694 212 82 122 3689 470076143 470079791 0.000000e+00 4542.0
13 TraesCS1B01G426400 chr1D 83.626 1539 189 39 1470 2984 470081079 470082578 0.000000e+00 1387.0
14 TraesCS1B01G426400 chr1D 82.338 1189 183 19 1469 2644 470190109 470191283 0.000000e+00 1007.0
15 TraesCS1B01G426400 chr1D 78.806 1307 226 29 1512 2784 470198453 470199742 0.000000e+00 832.0
16 TraesCS1B01G426400 chr1D 78.884 663 82 29 967 1599 470123329 470123963 2.670000e-106 396.0
17 TraesCS1B01G426400 chr1D 92.308 104 3 2 1 103 470075985 470076084 3.840000e-30 143.0
18 TraesCS1B01G426400 chr3D 76.923 689 122 28 2016 2690 414629822 414630487 1.260000e-94 357.0
19 TraesCS1B01G426400 chr5D 92.857 224 16 0 445 668 291500854 291501077 3.550000e-85 326.0
20 TraesCS1B01G426400 chr5B 92.857 224 16 0 445 668 332202778 332203001 3.550000e-85 326.0
21 TraesCS1B01G426400 chr5A 93.213 221 15 0 448 668 383882937 383883157 3.550000e-85 326.0
22 TraesCS1B01G426400 chr7D 92.019 213 17 0 454 666 477072510 477072298 2.150000e-77 300.0
23 TraesCS1B01G426400 chr7A 91.667 216 18 0 448 663 518809465 518809680 2.150000e-77 300.0
24 TraesCS1B01G426400 chr3B 91.244 217 19 0 449 665 525228427 525228211 2.790000e-76 296.0
25 TraesCS1B01G426400 chr3A 91.244 217 19 0 449 665 518630441 518630225 2.790000e-76 296.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G426400 chr1B 652458275 652461963 3688 False 6813.000000 6813 100.0000 1 3689 1 chr1B.!!$F1 3688
1 TraesCS1B01G426400 chr1B 652569911 652571341 1430 False 1129.000000 1129 81.1480 1428 2874 1 chr1B.!!$F3 1446
2 TraesCS1B01G426400 chr1B 652485091 652485708 617 False 353.000000 353 77.7260 977 1599 1 chr1B.!!$F2 622
3 TraesCS1B01G426400 chr1A 563685219 563691778 6559 False 2026.633333 4638 90.4670 54 3689 3 chr1A.!!$F4 3635
4 TraesCS1B01G426400 chr1A 563783580 563785021 1441 False 1112.000000 1112 80.8740 1432 2874 1 chr1A.!!$F1 1442
5 TraesCS1B01G426400 chr1A 563791354 563792253 899 False 898.000000 898 84.7160 1436 2347 1 chr1A.!!$F2 911
6 TraesCS1B01G426400 chr1A 563764604 563766845 2241 False 820.000000 1279 80.6575 970 2874 2 chr1A.!!$F5 1904
7 TraesCS1B01G426400 chr1A 563799386 563800082 696 False 298.000000 298 75.2390 2343 3053 1 chr1A.!!$F3 710
8 TraesCS1B01G426400 chr1D 470075985 470082578 6593 False 2024.000000 4542 88.5220 1 3689 3 chr1D.!!$F4 3688
9 TraesCS1B01G426400 chr1D 470190109 470191283 1174 False 1007.000000 1007 82.3380 1469 2644 1 chr1D.!!$F2 1175
10 TraesCS1B01G426400 chr1D 470198453 470199742 1289 False 832.000000 832 78.8060 1512 2784 1 chr1D.!!$F3 1272
11 TraesCS1B01G426400 chr1D 470123329 470123963 634 False 396.000000 396 78.8840 967 1599 1 chr1D.!!$F1 632
12 TraesCS1B01G426400 chr3D 414629822 414630487 665 False 357.000000 357 76.9230 2016 2690 1 chr3D.!!$F1 674

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
398 446 0.035152 GAGATCCACATGCCACACCA 60.035 55.0 0.0 0.0 0.0 4.17 F
941 1088 0.307760 GGTTCACTTCACACGGCAAG 59.692 55.0 0.0 0.0 0.0 4.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1403 1607 0.306533 CTTTCACCGAACACCAACCG 59.693 55.0 0.0 0.0 0.00 4.44 R
2730 10391 0.180406 ATGGCACGGTCAGATAACCC 59.820 55.0 0.0 0.0 35.79 4.11 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 4.672801 CGCTCTCAATTAAAAGGTTCCTGC 60.673 45.833 0.00 0.00 0.00 4.85
46 47 6.679327 ATTAAAAGGTTCCTGCGTCTAATC 57.321 37.500 0.00 0.00 0.00 1.75
49 50 1.134560 AGGTTCCTGCGTCTAATCGAC 59.865 52.381 0.00 0.00 39.33 4.20
50 51 1.557651 GTTCCTGCGTCTAATCGACC 58.442 55.000 0.00 0.00 39.56 4.79
51 52 1.134560 GTTCCTGCGTCTAATCGACCT 59.865 52.381 0.00 0.00 39.56 3.85
52 53 1.022735 TCCTGCGTCTAATCGACCTC 58.977 55.000 0.00 0.00 39.56 3.85
100 101 6.037610 GGAGTTGTAATTGATGGCTACAAGAG 59.962 42.308 0.00 0.00 36.48 2.85
101 102 6.476378 AGTTGTAATTGATGGCTACAAGAGT 58.524 36.000 0.00 0.00 36.48 3.24
103 104 6.985188 TGTAATTGATGGCTACAAGAGTTC 57.015 37.500 0.00 0.00 0.00 3.01
115 130 3.554934 ACAAGAGTTCCAAGCATGTTCA 58.445 40.909 0.00 0.00 0.00 3.18
116 131 3.567164 ACAAGAGTTCCAAGCATGTTCAG 59.433 43.478 0.00 0.00 0.00 3.02
119 134 1.610522 AGTTCCAAGCATGTTCAGCAC 59.389 47.619 0.00 0.00 0.00 4.40
137 179 2.096496 GCACAGGATTGCATGTACAGTC 59.904 50.000 0.33 0.00 42.49 3.51
138 180 3.337358 CACAGGATTGCATGTACAGTCA 58.663 45.455 0.33 0.00 36.82 3.41
139 181 3.373130 CACAGGATTGCATGTACAGTCAG 59.627 47.826 0.33 0.00 36.82 3.51
140 182 3.008375 ACAGGATTGCATGTACAGTCAGT 59.992 43.478 0.33 0.00 37.25 3.41
180 222 1.340017 TGGCCCTACACAATCTTCAGC 60.340 52.381 0.00 0.00 0.00 4.26
309 357 5.978919 TCAACATTCAGTGAAGCATTTCAAC 59.021 36.000 11.91 0.00 44.49 3.18
315 363 2.032030 AGTGAAGCATTTCAACCGAACG 60.032 45.455 0.00 0.00 44.49 3.95
356 404 0.750546 GCCTGCAGCATCATCCAAGA 60.751 55.000 8.66 0.00 42.97 3.02
366 414 0.527600 TCATCCAAGAATCGCCGACG 60.528 55.000 0.00 0.00 42.01 5.12
391 439 1.177256 GGGCCATGAGATCCACATGC 61.177 60.000 18.97 15.19 42.31 4.06
398 446 0.035152 GAGATCCACATGCCACACCA 60.035 55.000 0.00 0.00 0.00 4.17
407 455 3.667282 GCCACACCAGCTGCTGTG 61.667 66.667 28.08 28.08 38.01 3.66
440 504 3.280968 GGGGGTTGGAATGGGGGT 61.281 66.667 0.00 0.00 0.00 4.95
441 505 1.936995 GGGGGTTGGAATGGGGGTA 60.937 63.158 0.00 0.00 0.00 3.69
445 509 1.219131 GGTTGGAATGGGGGTAGGGT 61.219 60.000 0.00 0.00 0.00 4.34
605 673 4.278513 TTGGACTTGCCCACCCCG 62.279 66.667 0.00 0.00 35.62 5.73
674 742 1.338136 CCCTGTACGCCATCTCCCTT 61.338 60.000 0.00 0.00 0.00 3.95
675 751 0.541863 CCTGTACGCCATCTCCCTTT 59.458 55.000 0.00 0.00 0.00 3.11
727 841 0.392193 GCTCTTCCTTGCTGCTGCTA 60.392 55.000 17.00 8.35 40.48 3.49
736 850 0.390866 TGCTGCTGCTACTGCTTCTC 60.391 55.000 17.00 0.00 40.48 2.87
740 854 0.718343 GCTGCTACTGCTTCTCGTTG 59.282 55.000 0.00 0.00 40.48 4.10
741 855 1.354040 CTGCTACTGCTTCTCGTTGG 58.646 55.000 0.00 0.00 40.48 3.77
742 856 0.670546 TGCTACTGCTTCTCGTTGGC 60.671 55.000 0.00 0.00 40.48 4.52
743 857 0.390472 GCTACTGCTTCTCGTTGGCT 60.390 55.000 0.00 0.00 36.03 4.75
744 858 1.354040 CTACTGCTTCTCGTTGGCTG 58.646 55.000 0.00 0.00 0.00 4.85
745 859 0.670546 TACTGCTTCTCGTTGGCTGC 60.671 55.000 0.00 0.00 0.00 5.25
764 878 1.472878 GCGGCTGGATAGATCGTATCA 59.527 52.381 11.73 0.20 0.00 2.15
771 885 0.809385 ATAGATCGTATCACGGCCGG 59.191 55.000 31.76 18.67 42.81 6.13
775 889 4.884257 CGTATCACGGCCGGGGTG 62.884 72.222 30.43 18.34 38.08 4.61
871 996 1.137675 GGCCCAAGGAATGAGAAATGC 59.862 52.381 0.00 0.00 0.00 3.56
872 997 1.202336 GCCCAAGGAATGAGAAATGCG 60.202 52.381 0.00 0.00 0.00 4.73
878 1025 2.063541 GAATGAGAAATGCGGGCCCG 62.064 60.000 40.26 40.26 43.09 6.13
938 1085 1.557443 CTCGGTTCACTTCACACGGC 61.557 60.000 0.00 0.00 0.00 5.68
939 1086 1.885388 CGGTTCACTTCACACGGCA 60.885 57.895 0.00 0.00 0.00 5.69
940 1087 1.433053 CGGTTCACTTCACACGGCAA 61.433 55.000 0.00 0.00 0.00 4.52
941 1088 0.307760 GGTTCACTTCACACGGCAAG 59.692 55.000 0.00 0.00 0.00 4.01
942 1089 0.317020 GTTCACTTCACACGGCAAGC 60.317 55.000 0.00 0.00 0.00 4.01
957 1117 2.900106 AAGCCCAGGAGCCAGTCAC 61.900 63.158 0.00 0.00 0.00 3.67
959 1119 2.348998 CCCAGGAGCCAGTCACAC 59.651 66.667 0.00 0.00 0.00 3.82
960 1120 2.219875 CCCAGGAGCCAGTCACACT 61.220 63.158 0.00 0.00 0.00 3.55
962 1122 1.080230 CAGGAGCCAGTCACACTCG 60.080 63.158 0.00 0.00 0.00 4.18
965 1125 1.367840 GAGCCAGTCACACTCGGTT 59.632 57.895 0.00 0.00 0.00 4.44
1077 1238 0.958091 CTGCTCTCTCTGGTATCCGG 59.042 60.000 0.00 0.00 0.00 5.14
1138 1318 2.283894 GGAGCCAGGGGTTTTGGG 60.284 66.667 0.00 0.00 36.19 4.12
1148 1328 2.036572 GTTTTGGGGCCGGGATGA 59.963 61.111 2.18 0.00 0.00 2.92
1249 1440 1.380515 CTCGGGCCTCCTCTCTTGA 60.381 63.158 0.84 0.00 0.00 3.02
1277 1475 4.308458 TGTGCGTCTGGGGTTCCG 62.308 66.667 0.00 0.00 35.24 4.30
1388 1591 1.402852 CCGTGCAGTCATTCTTCTCGA 60.403 52.381 0.00 0.00 30.57 4.04
1403 1607 2.489971 TCTCGATGTGTTTGGTTGGAC 58.510 47.619 0.00 0.00 0.00 4.02
1458 1678 3.896648 TGATGTTGTTTCTTTCCGCTC 57.103 42.857 0.00 0.00 0.00 5.03
1464 1684 1.671054 TTTCTTTCCGCTCGCAGGG 60.671 57.895 0.00 0.00 0.00 4.45
1465 1685 4.760047 TCTTTCCGCTCGCAGGGC 62.760 66.667 0.00 0.00 0.00 5.19
1797 2371 1.358759 CGACGGCTGCTTTTTGGTT 59.641 52.632 0.00 0.00 0.00 3.67
1929 2509 3.206150 CCCTTACACTACATGGATGCAC 58.794 50.000 0.00 0.00 0.00 4.57
1950 2530 5.987953 GCACATCAATACATCTGAGAAGCTA 59.012 40.000 0.00 0.00 0.00 3.32
1992 2572 1.911293 GCTCGCCAAATCTCGTTGCA 61.911 55.000 0.00 0.00 0.00 4.08
2007 2587 0.740868 TTGCAGCACTAGTCGGCATC 60.741 55.000 16.21 5.72 34.03 3.91
2125 2705 1.519455 CAGGGAAAGCTCTACGCCG 60.519 63.158 0.00 0.00 40.39 6.46
2329 6471 2.361104 GGAGGGCGATTTGGTGCA 60.361 61.111 0.00 0.00 0.00 4.57
2377 10022 0.761187 AGTTGTTGCCAGAGAGAGCA 59.239 50.000 0.00 0.00 37.18 4.26
2379 10024 0.604780 TTGTTGCCAGAGAGAGCAGC 60.605 55.000 0.00 0.00 40.73 5.25
2391 10036 3.560105 AGAGAGCAGCTTTGAGGTTTTT 58.440 40.909 0.00 0.00 0.00 1.94
2431 10076 2.032071 GGTGGGTCAAGGTGTCGG 59.968 66.667 0.00 0.00 0.00 4.79
2443 10088 3.897122 TGTCGGCTTTGGGGGCTT 61.897 61.111 0.00 0.00 0.00 4.35
2446 10097 2.600173 CGGCTTTGGGGGCTTTGA 60.600 61.111 0.00 0.00 0.00 2.69
2474 10125 4.021925 GCGAAGGTGCTCCAGGGT 62.022 66.667 7.70 0.00 35.89 4.34
2492 10143 3.053619 AGGGTTTTGTCCTTGTCTCAGTT 60.054 43.478 0.00 0.00 0.00 3.16
2494 10145 4.202020 GGGTTTTGTCCTTGTCTCAGTTTC 60.202 45.833 0.00 0.00 0.00 2.78
2497 10148 2.036387 TGTCCTTGTCTCAGTTTCGGA 58.964 47.619 0.00 0.00 0.00 4.55
2502 10153 3.516615 CTTGTCTCAGTTTCGGATCCTC 58.483 50.000 10.75 0.00 0.00 3.71
2504 10155 1.743958 GTCTCAGTTTCGGATCCTCGA 59.256 52.381 10.75 0.00 37.38 4.04
2543 10194 5.845065 TCTTGGATGATGATGAGGAGAATCT 59.155 40.000 0.00 0.00 33.73 2.40
2607 10258 6.239148 GCACCTATGACATAAGATCTGACAGA 60.239 42.308 7.80 7.80 0.00 3.41
2624 10275 2.254459 CAGAGTCCGTTCTGTTCATCG 58.746 52.381 0.00 0.00 39.76 3.84
2679 10330 3.207669 GCAGCATGGCTCTTCCCG 61.208 66.667 0.00 0.00 36.40 5.14
2681 10332 4.845580 AGCATGGCTCTTCCCGCG 62.846 66.667 0.00 0.00 37.34 6.46
2712 10371 4.038883 AGCGGAGGTGTTATACTGTTATCC 59.961 45.833 0.00 0.00 36.17 2.59
2729 10390 0.984961 TCCCTATGCAGGCTGCTTCT 60.985 55.000 36.50 23.83 45.31 2.85
2730 10391 0.818445 CCCTATGCAGGCTGCTTCTG 60.818 60.000 36.50 24.84 45.31 3.02
2747 10408 0.462047 CTGGGTTATCTGACCGTGCC 60.462 60.000 0.00 0.00 40.75 5.01
2752 10413 2.135933 GTTATCTGACCGTGCCATAGC 58.864 52.381 0.00 0.00 40.48 2.97
2769 10430 1.392589 AGCTGTTGTTGTTCAGTGGG 58.607 50.000 0.00 0.00 34.57 4.61
2771 10432 1.476488 GCTGTTGTTGTTCAGTGGGTT 59.524 47.619 0.00 0.00 34.57 4.11
2795 10456 1.536766 TGCAAGCTGCTCACATGTTAC 59.463 47.619 1.00 0.00 45.31 2.50
2825 10494 4.025360 ACCGTGGTATGTATGGTAGTTGA 58.975 43.478 0.00 0.00 35.71 3.18
2832 10501 5.989777 GGTATGTATGGTAGTTGATGTGGTC 59.010 44.000 0.00 0.00 0.00 4.02
2900 10576 7.719871 TTATCTGAGCTAGGTTACTCTGTTT 57.280 36.000 0.00 0.00 34.52 2.83
2902 10578 3.926616 TGAGCTAGGTTACTCTGTTTGC 58.073 45.455 0.00 0.00 33.92 3.68
2905 10583 3.003480 GCTAGGTTACTCTGTTTGCCTG 58.997 50.000 0.00 0.00 0.00 4.85
2929 10614 9.776158 CTGTGTATTAGTACTTGTCTGAACTAG 57.224 37.037 0.00 0.00 34.82 2.57
2940 10625 6.706270 ACTTGTCTGAACTAGTAATTGTGGTG 59.294 38.462 0.00 0.00 39.28 4.17
2941 10626 5.547465 TGTCTGAACTAGTAATTGTGGTGG 58.453 41.667 0.00 0.00 0.00 4.61
2942 10627 5.071250 TGTCTGAACTAGTAATTGTGGTGGT 59.929 40.000 0.00 0.00 0.00 4.16
2943 10628 5.995897 GTCTGAACTAGTAATTGTGGTGGTT 59.004 40.000 0.00 0.00 0.00 3.67
2944 10629 5.995282 TCTGAACTAGTAATTGTGGTGGTTG 59.005 40.000 0.00 0.00 0.00 3.77
2945 10630 5.931294 TGAACTAGTAATTGTGGTGGTTGA 58.069 37.500 0.00 0.00 0.00 3.18
2984 10669 0.594602 GGCGGTTTTCAACTGGTACC 59.405 55.000 4.43 4.43 38.23 3.34
2991 10676 1.956297 TTCAACTGGTACCGTGGTTG 58.044 50.000 25.87 25.87 39.95 3.77
2996 10681 1.512156 CTGGTACCGTGGTTGTTGCC 61.512 60.000 7.57 0.00 0.00 4.52
3005 10690 0.821711 TGGTTGTTGCCTGTGCCTAC 60.822 55.000 0.00 0.00 36.33 3.18
3010 10695 0.948678 GTTGCCTGTGCCTACGAAAA 59.051 50.000 0.00 0.00 36.33 2.29
3038 10723 7.446625 ACTCAAAATGCATAACTTCTTCTCTGT 59.553 33.333 0.00 0.00 0.00 3.41
3046 10731 8.314021 TGCATAACTTCTTCTCTGTATCTTTGA 58.686 33.333 0.00 0.00 0.00 2.69
3053 10738 6.401394 TCTTCTCTGTATCTTTGACATGGTG 58.599 40.000 0.00 0.00 0.00 4.17
3054 10739 5.089970 TCTCTGTATCTTTGACATGGTGG 57.910 43.478 0.00 0.00 0.00 4.61
3055 10740 3.609853 TCTGTATCTTTGACATGGTGGC 58.390 45.455 0.00 0.00 0.00 5.01
3056 10741 2.684881 CTGTATCTTTGACATGGTGGCC 59.315 50.000 0.00 0.00 0.00 5.36
3057 10742 2.308570 TGTATCTTTGACATGGTGGCCT 59.691 45.455 3.32 0.00 0.00 5.19
3058 10743 2.610438 ATCTTTGACATGGTGGCCTT 57.390 45.000 3.32 0.00 0.00 4.35
3059 10744 2.380064 TCTTTGACATGGTGGCCTTT 57.620 45.000 3.32 0.00 0.00 3.11
3060 10745 2.676748 TCTTTGACATGGTGGCCTTTT 58.323 42.857 3.32 0.00 0.00 2.27
3061 10746 3.838565 TCTTTGACATGGTGGCCTTTTA 58.161 40.909 3.32 0.00 0.00 1.52
3062 10747 4.415596 TCTTTGACATGGTGGCCTTTTAT 58.584 39.130 3.32 0.00 0.00 1.40
3063 10748 5.575157 TCTTTGACATGGTGGCCTTTTATA 58.425 37.500 3.32 0.00 0.00 0.98
3064 10749 6.194235 TCTTTGACATGGTGGCCTTTTATAT 58.806 36.000 3.32 0.00 0.00 0.86
3065 10750 6.321181 TCTTTGACATGGTGGCCTTTTATATC 59.679 38.462 3.32 0.00 0.00 1.63
3066 10751 5.387113 TGACATGGTGGCCTTTTATATCT 57.613 39.130 3.32 0.00 0.00 1.98
3067 10752 5.132502 TGACATGGTGGCCTTTTATATCTG 58.867 41.667 3.32 0.00 0.00 2.90
3068 10753 5.104151 TGACATGGTGGCCTTTTATATCTGA 60.104 40.000 3.32 0.00 0.00 3.27
3069 10754 5.765510 ACATGGTGGCCTTTTATATCTGAA 58.234 37.500 3.32 0.00 0.00 3.02
3070 10755 5.594317 ACATGGTGGCCTTTTATATCTGAAC 59.406 40.000 3.32 0.00 0.00 3.18
3071 10756 5.450818 TGGTGGCCTTTTATATCTGAACT 57.549 39.130 3.32 0.00 0.00 3.01
3072 10757 6.569127 TGGTGGCCTTTTATATCTGAACTA 57.431 37.500 3.32 0.00 0.00 2.24
3073 10758 6.591935 TGGTGGCCTTTTATATCTGAACTAG 58.408 40.000 3.32 0.00 0.00 2.57
3074 10759 5.998363 GGTGGCCTTTTATATCTGAACTAGG 59.002 44.000 3.32 0.00 0.00 3.02
3075 10760 6.409349 GGTGGCCTTTTATATCTGAACTAGGT 60.409 42.308 3.32 0.00 0.00 3.08
3076 10761 7.054751 GTGGCCTTTTATATCTGAACTAGGTT 58.945 38.462 3.32 0.00 0.00 3.50
3077 10762 8.208903 GTGGCCTTTTATATCTGAACTAGGTTA 58.791 37.037 3.32 0.00 0.00 2.85
3078 10763 8.208903 TGGCCTTTTATATCTGAACTAGGTTAC 58.791 37.037 3.32 0.00 0.00 2.50
3079 10764 8.430431 GGCCTTTTATATCTGAACTAGGTTACT 58.570 37.037 0.00 0.00 0.00 2.24
3080 10765 9.478768 GCCTTTTATATCTGAACTAGGTTACTC 57.521 37.037 0.00 0.00 0.00 2.59
3087 10772 9.924010 ATATCTGAACTAGGTTACTCTGTTAGT 57.076 33.333 0.00 0.00 42.62 2.24
3088 10773 8.653036 ATCTGAACTAGGTTACTCTGTTAGTT 57.347 34.615 0.00 0.00 39.80 2.24
3089 10774 9.750783 ATCTGAACTAGGTTACTCTGTTAGTTA 57.249 33.333 0.00 0.00 39.80 2.24
3090 10775 9.007901 TCTGAACTAGGTTACTCTGTTAGTTAC 57.992 37.037 0.00 0.00 39.80 2.50
3091 10776 8.696043 TGAACTAGGTTACTCTGTTAGTTACA 57.304 34.615 0.00 0.00 39.09 2.41
3117 10802 9.924010 AGTCTTATACTGGTACTCTGAACTAAT 57.076 33.333 0.00 0.00 36.93 1.73
3124 10809 8.147244 ACTGGTACTCTGAACTAATTTATGGT 57.853 34.615 0.00 0.00 0.00 3.55
3125 10810 8.258708 ACTGGTACTCTGAACTAATTTATGGTC 58.741 37.037 0.00 0.00 0.00 4.02
3126 10811 7.262772 TGGTACTCTGAACTAATTTATGGTCG 58.737 38.462 0.00 0.00 0.00 4.79
3127 10812 7.093640 TGGTACTCTGAACTAATTTATGGTCGT 60.094 37.037 0.00 0.00 0.00 4.34
3128 10813 7.763071 GGTACTCTGAACTAATTTATGGTCGTT 59.237 37.037 0.00 0.00 0.00 3.85
3129 10814 9.793252 GTACTCTGAACTAATTTATGGTCGTTA 57.207 33.333 0.00 0.00 0.00 3.18
3131 10816 9.886132 ACTCTGAACTAATTTATGGTCGTTAAT 57.114 29.630 0.00 0.00 0.00 1.40
3133 10818 9.661563 TCTGAACTAATTTATGGTCGTTAATGT 57.338 29.630 0.00 0.00 0.00 2.71
3134 10819 9.702726 CTGAACTAATTTATGGTCGTTAATGTG 57.297 33.333 0.00 0.00 0.00 3.21
3135 10820 9.438228 TGAACTAATTTATGGTCGTTAATGTGA 57.562 29.630 0.00 0.00 0.00 3.58
3138 10823 8.395633 ACTAATTTATGGTCGTTAATGTGAAGC 58.604 33.333 0.00 0.00 0.00 3.86
3139 10824 7.391148 AATTTATGGTCGTTAATGTGAAGCT 57.609 32.000 0.00 0.00 0.00 3.74
3140 10825 5.794687 TTATGGTCGTTAATGTGAAGCTG 57.205 39.130 0.00 0.00 0.00 4.24
3141 10826 3.120321 TGGTCGTTAATGTGAAGCTGT 57.880 42.857 0.00 0.00 0.00 4.40
3142 10827 3.472652 TGGTCGTTAATGTGAAGCTGTT 58.527 40.909 0.00 0.00 0.00 3.16
3143 10828 4.633175 TGGTCGTTAATGTGAAGCTGTTA 58.367 39.130 0.00 0.00 0.00 2.41
3144 10829 5.057819 TGGTCGTTAATGTGAAGCTGTTAA 58.942 37.500 0.00 0.00 0.00 2.01
3145 10830 5.049954 TGGTCGTTAATGTGAAGCTGTTAAC 60.050 40.000 0.00 0.00 35.03 2.01
3146 10831 5.178809 GGTCGTTAATGTGAAGCTGTTAACT 59.821 40.000 7.22 0.00 35.79 2.24
3147 10832 6.071463 GTCGTTAATGTGAAGCTGTTAACTG 58.929 40.000 7.22 7.67 35.79 3.16
3148 10833 4.846137 CGTTAATGTGAAGCTGTTAACTGC 59.154 41.667 25.11 25.11 40.53 4.40
3149 10834 5.559991 CGTTAATGTGAAGCTGTTAACTGCA 60.560 40.000 31.16 15.96 42.33 4.41
3150 10835 6.381801 GTTAATGTGAAGCTGTTAACTGCAT 58.618 36.000 31.16 23.40 42.33 3.96
3151 10836 5.458041 AATGTGAAGCTGTTAACTGCATT 57.542 34.783 31.16 23.15 42.33 3.56
3152 10837 4.227512 TGTGAAGCTGTTAACTGCATTG 57.772 40.909 31.16 7.36 42.33 2.82
3153 10838 3.004629 TGTGAAGCTGTTAACTGCATTGG 59.995 43.478 31.16 5.89 42.33 3.16
3154 10839 3.004734 GTGAAGCTGTTAACTGCATTGGT 59.995 43.478 31.16 13.57 42.33 3.67
3155 10840 3.253188 TGAAGCTGTTAACTGCATTGGTC 59.747 43.478 31.16 21.13 42.33 4.02
3156 10841 3.146104 AGCTGTTAACTGCATTGGTCT 57.854 42.857 31.16 12.33 42.33 3.85
3157 10842 3.490348 AGCTGTTAACTGCATTGGTCTT 58.510 40.909 31.16 11.71 42.33 3.01
3158 10843 3.503748 AGCTGTTAACTGCATTGGTCTTC 59.496 43.478 31.16 5.95 42.33 2.87
3159 10844 3.253188 GCTGTTAACTGCATTGGTCTTCA 59.747 43.478 26.83 0.00 40.06 3.02
3160 10845 4.261572 GCTGTTAACTGCATTGGTCTTCAA 60.262 41.667 26.83 0.00 40.06 2.69
3161 10846 5.181690 TGTTAACTGCATTGGTCTTCAAC 57.818 39.130 7.22 0.00 38.31 3.18
3162 10847 4.887071 TGTTAACTGCATTGGTCTTCAACT 59.113 37.500 7.22 0.00 38.31 3.16
3163 10848 3.996150 AACTGCATTGGTCTTCAACTG 57.004 42.857 0.00 0.00 38.31 3.16
3164 10849 2.233271 ACTGCATTGGTCTTCAACTGG 58.767 47.619 0.00 0.00 38.31 4.00
3165 10850 2.233271 CTGCATTGGTCTTCAACTGGT 58.767 47.619 0.00 0.00 38.31 4.00
3166 10851 3.181445 ACTGCATTGGTCTTCAACTGGTA 60.181 43.478 0.00 0.00 38.31 3.25
3167 10852 3.411446 TGCATTGGTCTTCAACTGGTAG 58.589 45.455 0.00 0.00 38.31 3.18
3168 10853 2.162408 GCATTGGTCTTCAACTGGTAGC 59.838 50.000 0.00 0.00 38.31 3.58
3169 10854 3.679389 CATTGGTCTTCAACTGGTAGCT 58.321 45.455 0.00 0.00 38.31 3.32
3170 10855 3.402628 TTGGTCTTCAACTGGTAGCTC 57.597 47.619 0.00 0.00 0.00 4.09
3171 10856 2.609747 TGGTCTTCAACTGGTAGCTCT 58.390 47.619 0.00 0.00 0.00 4.09
3172 10857 2.300152 TGGTCTTCAACTGGTAGCTCTG 59.700 50.000 0.00 0.00 0.00 3.35
3173 10858 2.563179 GGTCTTCAACTGGTAGCTCTGA 59.437 50.000 0.00 0.00 0.00 3.27
3174 10859 3.196685 GGTCTTCAACTGGTAGCTCTGAT 59.803 47.826 0.00 0.00 0.00 2.90
3175 10860 4.323104 GGTCTTCAACTGGTAGCTCTGATT 60.323 45.833 0.00 0.00 0.00 2.57
3176 10861 4.629200 GTCTTCAACTGGTAGCTCTGATTG 59.371 45.833 0.00 0.00 0.00 2.67
3177 10862 4.284490 TCTTCAACTGGTAGCTCTGATTGT 59.716 41.667 0.00 0.00 0.00 2.71
3178 10863 4.623932 TCAACTGGTAGCTCTGATTGTT 57.376 40.909 0.00 0.00 0.00 2.83
3179 10864 4.318332 TCAACTGGTAGCTCTGATTGTTG 58.682 43.478 0.00 0.04 36.05 3.33
3180 10865 4.067896 CAACTGGTAGCTCTGATTGTTGT 58.932 43.478 0.00 0.00 31.85 3.32
3181 10866 4.357918 ACTGGTAGCTCTGATTGTTGTT 57.642 40.909 0.00 0.00 0.00 2.83
3182 10867 4.067896 ACTGGTAGCTCTGATTGTTGTTG 58.932 43.478 0.00 0.00 0.00 3.33
3183 10868 4.067896 CTGGTAGCTCTGATTGTTGTTGT 58.932 43.478 0.00 0.00 0.00 3.32
3184 10869 3.814842 TGGTAGCTCTGATTGTTGTTGTG 59.185 43.478 0.00 0.00 0.00 3.33
3185 10870 3.365364 GGTAGCTCTGATTGTTGTTGTGC 60.365 47.826 0.00 0.00 0.00 4.57
3186 10871 1.265095 AGCTCTGATTGTTGTTGTGCG 59.735 47.619 0.00 0.00 0.00 5.34
3187 10872 1.002468 GCTCTGATTGTTGTTGTGCGT 60.002 47.619 0.00 0.00 0.00 5.24
3188 10873 2.223144 GCTCTGATTGTTGTTGTGCGTA 59.777 45.455 0.00 0.00 0.00 4.42
3189 10874 3.120199 GCTCTGATTGTTGTTGTGCGTAT 60.120 43.478 0.00 0.00 0.00 3.06
3190 10875 4.397382 CTCTGATTGTTGTTGTGCGTATG 58.603 43.478 0.00 0.00 0.00 2.39
3191 10876 3.188254 TCTGATTGTTGTTGTGCGTATGG 59.812 43.478 0.00 0.00 0.00 2.74
3192 10877 3.142174 TGATTGTTGTTGTGCGTATGGA 58.858 40.909 0.00 0.00 0.00 3.41
3193 10878 3.565902 TGATTGTTGTTGTGCGTATGGAA 59.434 39.130 0.00 0.00 0.00 3.53
3194 10879 3.617540 TTGTTGTTGTGCGTATGGAAG 57.382 42.857 0.00 0.00 0.00 3.46
3195 10880 2.839975 TGTTGTTGTGCGTATGGAAGA 58.160 42.857 0.00 0.00 0.00 2.87
3196 10881 3.407698 TGTTGTTGTGCGTATGGAAGAT 58.592 40.909 0.00 0.00 0.00 2.40
3197 10882 3.188254 TGTTGTTGTGCGTATGGAAGATG 59.812 43.478 0.00 0.00 0.00 2.90
3198 10883 3.052455 TGTTGTGCGTATGGAAGATGT 57.948 42.857 0.00 0.00 0.00 3.06
3199 10884 3.407698 TGTTGTGCGTATGGAAGATGTT 58.592 40.909 0.00 0.00 0.00 2.71
3200 10885 3.818210 TGTTGTGCGTATGGAAGATGTTT 59.182 39.130 0.00 0.00 0.00 2.83
3201 10886 4.998033 TGTTGTGCGTATGGAAGATGTTTA 59.002 37.500 0.00 0.00 0.00 2.01
3202 10887 5.470437 TGTTGTGCGTATGGAAGATGTTTAA 59.530 36.000 0.00 0.00 0.00 1.52
3203 10888 6.017026 TGTTGTGCGTATGGAAGATGTTTAAA 60.017 34.615 0.00 0.00 0.00 1.52
3204 10889 6.561737 TGTGCGTATGGAAGATGTTTAAAA 57.438 33.333 0.00 0.00 0.00 1.52
3205 10890 6.375377 TGTGCGTATGGAAGATGTTTAAAAC 58.625 36.000 0.00 0.00 0.00 2.43
3206 10891 5.506832 GTGCGTATGGAAGATGTTTAAAACG 59.493 40.000 0.00 0.00 0.00 3.60
3207 10892 4.494410 GCGTATGGAAGATGTTTAAAACGC 59.506 41.667 9.94 9.94 43.94 4.84
3208 10893 5.623335 CGTATGGAAGATGTTTAAAACGCA 58.377 37.500 0.00 0.00 0.00 5.24
3209 10894 6.255215 CGTATGGAAGATGTTTAAAACGCAT 58.745 36.000 0.00 0.00 0.00 4.73
3210 10895 7.403421 CGTATGGAAGATGTTTAAAACGCATA 58.597 34.615 0.00 0.00 0.00 3.14
3211 10896 7.906010 CGTATGGAAGATGTTTAAAACGCATAA 59.094 33.333 0.00 0.00 0.00 1.90
3212 10897 9.006215 GTATGGAAGATGTTTAAAACGCATAAC 57.994 33.333 0.00 0.00 0.00 1.89
3213 10898 7.209471 TGGAAGATGTTTAAAACGCATAACT 57.791 32.000 0.00 0.00 0.00 2.24
3214 10899 7.081349 TGGAAGATGTTTAAAACGCATAACTG 58.919 34.615 0.00 0.00 0.00 3.16
3215 10900 6.033513 GGAAGATGTTTAAAACGCATAACTGC 59.966 38.462 0.00 0.00 45.31 4.40
3216 10901 6.254281 AGATGTTTAAAACGCATAACTGCT 57.746 33.333 0.00 0.00 46.65 4.24
3217 10902 6.677913 AGATGTTTAAAACGCATAACTGCTT 58.322 32.000 0.00 0.00 46.65 3.91
3218 10903 7.812648 AGATGTTTAAAACGCATAACTGCTTA 58.187 30.769 0.00 0.00 46.65 3.09
3219 10904 8.458843 AGATGTTTAAAACGCATAACTGCTTAT 58.541 29.630 0.00 0.00 46.65 1.73
3220 10905 9.710979 GATGTTTAAAACGCATAACTGCTTATA 57.289 29.630 0.00 0.00 46.65 0.98
3222 10907 9.497030 TGTTTAAAACGCATAACTGCTTATATG 57.503 29.630 0.00 0.00 46.65 1.78
3223 10908 9.498307 GTTTAAAACGCATAACTGCTTATATGT 57.502 29.630 0.00 0.00 46.65 2.29
3227 10912 8.601845 AAACGCATAACTGCTTATATGTATCA 57.398 30.769 0.00 0.00 46.65 2.15
3228 10913 8.777865 AACGCATAACTGCTTATATGTATCAT 57.222 30.769 0.00 0.00 46.65 2.45
3229 10914 8.777865 ACGCATAACTGCTTATATGTATCATT 57.222 30.769 0.00 0.00 46.65 2.57
3230 10915 8.659491 ACGCATAACTGCTTATATGTATCATTG 58.341 33.333 0.00 0.00 46.65 2.82
3231 10916 8.118607 CGCATAACTGCTTATATGTATCATTGG 58.881 37.037 0.00 0.00 46.65 3.16
3232 10917 8.950210 GCATAACTGCTTATATGTATCATTGGT 58.050 33.333 0.00 0.00 45.32 3.67
3235 10920 7.969536 ACTGCTTATATGTATCATTGGTGTC 57.030 36.000 0.00 0.00 0.00 3.67
3236 10921 6.936900 ACTGCTTATATGTATCATTGGTGTCC 59.063 38.462 0.00 0.00 0.00 4.02
3237 10922 7.078249 TGCTTATATGTATCATTGGTGTCCT 57.922 36.000 0.00 0.00 0.00 3.85
3238 10923 6.936335 TGCTTATATGTATCATTGGTGTCCTG 59.064 38.462 0.00 0.00 0.00 3.86
3239 10924 6.372659 GCTTATATGTATCATTGGTGTCCTGG 59.627 42.308 0.00 0.00 0.00 4.45
3240 10925 5.912149 ATATGTATCATTGGTGTCCTGGT 57.088 39.130 0.00 0.00 0.00 4.00
3241 10926 3.627395 TGTATCATTGGTGTCCTGGTC 57.373 47.619 0.00 0.00 0.00 4.02
3242 10927 3.181329 TGTATCATTGGTGTCCTGGTCT 58.819 45.455 0.00 0.00 0.00 3.85
3243 10928 3.587061 TGTATCATTGGTGTCCTGGTCTT 59.413 43.478 0.00 0.00 0.00 3.01
3244 10929 3.814504 ATCATTGGTGTCCTGGTCTTT 57.185 42.857 0.00 0.00 0.00 2.52
3245 10930 3.593442 TCATTGGTGTCCTGGTCTTTT 57.407 42.857 0.00 0.00 0.00 2.27
3246 10931 3.909732 TCATTGGTGTCCTGGTCTTTTT 58.090 40.909 0.00 0.00 0.00 1.94
3268 10953 7.465353 TTTTCTATTCTGTGATGATTTGGCA 57.535 32.000 0.00 0.00 0.00 4.92
3269 10954 6.441093 TTCTATTCTGTGATGATTTGGCAC 57.559 37.500 0.00 0.00 0.00 5.01
3270 10955 3.770263 ATTCTGTGATGATTTGGCACG 57.230 42.857 0.00 0.00 35.37 5.34
3271 10956 1.452110 TCTGTGATGATTTGGCACGG 58.548 50.000 0.00 0.00 39.62 4.94
3272 10957 1.167851 CTGTGATGATTTGGCACGGT 58.832 50.000 0.00 0.00 34.92 4.83
3273 10958 0.880441 TGTGATGATTTGGCACGGTG 59.120 50.000 3.15 3.15 35.37 4.94
3274 10959 0.171007 GTGATGATTTGGCACGGTGG 59.829 55.000 10.60 0.00 0.00 4.61
3275 10960 0.251121 TGATGATTTGGCACGGTGGT 60.251 50.000 10.60 0.00 0.00 4.16
3277 10962 0.539438 ATGATTTGGCACGGTGGTGT 60.539 50.000 10.60 0.00 46.13 4.16
3278 10963 1.285641 GATTTGGCACGGTGGTGTG 59.714 57.895 10.60 0.00 46.13 3.82
3279 10964 1.452145 GATTTGGCACGGTGGTGTGT 61.452 55.000 10.60 0.00 46.13 3.72
3280 10965 1.733402 ATTTGGCACGGTGGTGTGTG 61.733 55.000 10.60 0.00 46.13 3.82
3281 10966 2.821679 TTTGGCACGGTGGTGTGTGA 62.822 55.000 10.60 0.00 46.13 3.58
3282 10967 3.276846 GGCACGGTGGTGTGTGAC 61.277 66.667 10.60 0.00 46.13 3.67
3283 10968 2.203015 GCACGGTGGTGTGTGACT 60.203 61.111 10.60 0.00 46.13 3.41
3284 10969 2.244651 GCACGGTGGTGTGTGACTC 61.245 63.158 10.60 0.00 46.13 3.36
3285 10970 1.594293 CACGGTGGTGTGTGACTCC 60.594 63.158 0.00 0.00 39.38 3.85
3286 10971 2.030562 CGGTGGTGTGTGACTCCC 59.969 66.667 0.00 0.00 31.02 4.30
3287 10972 2.507854 CGGTGGTGTGTGACTCCCT 61.508 63.158 0.00 0.00 31.02 4.20
3288 10973 1.071471 GGTGGTGTGTGACTCCCTG 59.929 63.158 0.00 0.00 31.02 4.45
3289 10974 1.696097 GGTGGTGTGTGACTCCCTGT 61.696 60.000 0.00 0.00 31.02 4.00
3290 10975 1.045407 GTGGTGTGTGACTCCCTGTA 58.955 55.000 0.00 0.00 31.02 2.74
3291 10976 1.000955 GTGGTGTGTGACTCCCTGTAG 59.999 57.143 0.00 0.00 31.02 2.74
3292 10977 1.339097 GGTGTGTGACTCCCTGTAGT 58.661 55.000 0.00 0.00 0.00 2.73
3293 10978 1.000955 GGTGTGTGACTCCCTGTAGTG 59.999 57.143 0.00 0.00 0.00 2.74
3294 10979 1.000955 GTGTGTGACTCCCTGTAGTGG 59.999 57.143 0.00 0.00 0.00 4.00
3295 10980 1.339097 GTGTGACTCCCTGTAGTGGT 58.661 55.000 0.00 0.00 0.00 4.16
3296 10981 2.158430 TGTGTGACTCCCTGTAGTGGTA 60.158 50.000 0.00 0.00 0.00 3.25
3297 10982 2.492484 GTGTGACTCCCTGTAGTGGTAG 59.508 54.545 0.00 0.00 0.00 3.18
3298 10983 2.377531 TGTGACTCCCTGTAGTGGTAGA 59.622 50.000 0.00 0.00 0.00 2.59
3299 10984 3.011369 TGTGACTCCCTGTAGTGGTAGAT 59.989 47.826 0.00 0.00 0.00 1.98
3300 10985 4.024670 GTGACTCCCTGTAGTGGTAGATT 58.975 47.826 0.00 0.00 0.00 2.40
3301 10986 4.466726 GTGACTCCCTGTAGTGGTAGATTT 59.533 45.833 0.00 0.00 0.00 2.17
3302 10987 4.466370 TGACTCCCTGTAGTGGTAGATTTG 59.534 45.833 0.00 0.00 0.00 2.32
3303 10988 4.426704 ACTCCCTGTAGTGGTAGATTTGT 58.573 43.478 0.00 0.00 0.00 2.83
3304 10989 4.844655 ACTCCCTGTAGTGGTAGATTTGTT 59.155 41.667 0.00 0.00 0.00 2.83
3305 10990 5.309806 ACTCCCTGTAGTGGTAGATTTGTTT 59.690 40.000 0.00 0.00 0.00 2.83
3306 10991 6.183361 ACTCCCTGTAGTGGTAGATTTGTTTT 60.183 38.462 0.00 0.00 0.00 2.43
3307 10992 6.607019 TCCCTGTAGTGGTAGATTTGTTTTT 58.393 36.000 0.00 0.00 0.00 1.94
3308 10993 7.747690 TCCCTGTAGTGGTAGATTTGTTTTTA 58.252 34.615 0.00 0.00 0.00 1.52
3309 10994 7.881232 TCCCTGTAGTGGTAGATTTGTTTTTAG 59.119 37.037 0.00 0.00 0.00 1.85
3310 10995 7.361799 CCCTGTAGTGGTAGATTTGTTTTTAGC 60.362 40.741 0.00 0.00 0.00 3.09
3311 10996 7.390718 CCTGTAGTGGTAGATTTGTTTTTAGCT 59.609 37.037 0.00 0.00 0.00 3.32
3312 10997 8.094798 TGTAGTGGTAGATTTGTTTTTAGCTG 57.905 34.615 0.00 0.00 0.00 4.24
3313 10998 7.934665 TGTAGTGGTAGATTTGTTTTTAGCTGA 59.065 33.333 0.00 0.00 0.00 4.26
3314 10999 7.817418 AGTGGTAGATTTGTTTTTAGCTGAA 57.183 32.000 0.00 0.00 0.00 3.02
3315 11000 7.875971 AGTGGTAGATTTGTTTTTAGCTGAAG 58.124 34.615 0.00 0.00 0.00 3.02
3316 11001 7.502561 AGTGGTAGATTTGTTTTTAGCTGAAGT 59.497 33.333 0.00 0.00 0.00 3.01
3317 11002 8.780249 GTGGTAGATTTGTTTTTAGCTGAAGTA 58.220 33.333 0.00 0.00 0.00 2.24
3318 11003 8.999431 TGGTAGATTTGTTTTTAGCTGAAGTAG 58.001 33.333 0.00 0.00 0.00 2.57
3331 11016 4.669206 CTGAAGTAGCTGTGATGATCCT 57.331 45.455 0.00 0.00 0.00 3.24
3332 11017 5.021033 CTGAAGTAGCTGTGATGATCCTT 57.979 43.478 0.00 0.00 0.00 3.36
3333 11018 6.154203 CTGAAGTAGCTGTGATGATCCTTA 57.846 41.667 0.00 0.00 0.00 2.69
3334 11019 5.907207 TGAAGTAGCTGTGATGATCCTTAC 58.093 41.667 0.00 0.00 0.00 2.34
3335 11020 4.576216 AGTAGCTGTGATGATCCTTACG 57.424 45.455 0.00 0.00 0.00 3.18
3336 11021 2.231215 AGCTGTGATGATCCTTACGC 57.769 50.000 0.00 0.00 0.00 4.42
3337 11022 1.482182 AGCTGTGATGATCCTTACGCA 59.518 47.619 10.30 0.00 0.00 5.24
3338 11023 1.863454 GCTGTGATGATCCTTACGCAG 59.137 52.381 0.00 0.00 41.74 5.18
3340 11025 3.525537 CTGTGATGATCCTTACGCAGTT 58.474 45.455 0.00 0.00 37.78 3.16
3341 11026 3.261580 TGTGATGATCCTTACGCAGTTG 58.738 45.455 0.00 0.00 37.78 3.16
3342 11027 3.262420 GTGATGATCCTTACGCAGTTGT 58.738 45.455 0.00 0.00 37.78 3.32
3343 11028 3.062639 GTGATGATCCTTACGCAGTTGTG 59.937 47.826 0.00 0.00 37.78 3.33
3344 11029 1.438651 TGATCCTTACGCAGTTGTGC 58.561 50.000 0.00 0.00 37.78 4.57
3356 11041 1.002468 CAGTTGTGCTGTTAGTGTGGC 60.002 52.381 0.00 0.00 40.27 5.01
3357 11042 1.134098 AGTTGTGCTGTTAGTGTGGCT 60.134 47.619 0.00 0.00 0.00 4.75
3358 11043 1.676006 GTTGTGCTGTTAGTGTGGCTT 59.324 47.619 0.00 0.00 0.00 4.35
3359 11044 1.308047 TGTGCTGTTAGTGTGGCTTG 58.692 50.000 0.00 0.00 0.00 4.01
3360 11045 1.134250 TGTGCTGTTAGTGTGGCTTGA 60.134 47.619 0.00 0.00 0.00 3.02
3361 11046 1.946768 GTGCTGTTAGTGTGGCTTGAA 59.053 47.619 0.00 0.00 0.00 2.69
3362 11047 1.946768 TGCTGTTAGTGTGGCTTGAAC 59.053 47.619 0.00 0.00 0.00 3.18
3363 11048 1.946768 GCTGTTAGTGTGGCTTGAACA 59.053 47.619 0.00 0.00 0.00 3.18
3364 11049 2.287009 GCTGTTAGTGTGGCTTGAACAC 60.287 50.000 0.00 0.00 46.70 3.32
3373 11058 5.375417 TGTGGCTTGAACACATATTTCAG 57.625 39.130 0.00 0.00 43.35 3.02
3374 11059 4.168760 GTGGCTTGAACACATATTTCAGC 58.831 43.478 0.00 0.00 38.67 4.26
3375 11060 3.825585 TGGCTTGAACACATATTTCAGCA 59.174 39.130 9.92 0.00 34.50 4.41
3376 11061 4.280425 TGGCTTGAACACATATTTCAGCAA 59.720 37.500 9.92 0.00 34.50 3.91
3377 11062 4.622740 GGCTTGAACACATATTTCAGCAAC 59.377 41.667 9.92 0.00 34.50 4.17
3378 11063 5.464168 GCTTGAACACATATTTCAGCAACT 58.536 37.500 0.00 0.00 34.50 3.16
3379 11064 5.922544 GCTTGAACACATATTTCAGCAACTT 59.077 36.000 0.00 0.00 34.50 2.66
3380 11065 6.421801 GCTTGAACACATATTTCAGCAACTTT 59.578 34.615 0.00 0.00 34.50 2.66
3381 11066 7.042523 GCTTGAACACATATTTCAGCAACTTTT 60.043 33.333 0.00 0.00 34.50 2.27
3382 11067 8.715191 TTGAACACATATTTCAGCAACTTTTT 57.285 26.923 0.00 0.00 34.50 1.94
3383 11068 8.351495 TGAACACATATTTCAGCAACTTTTTC 57.649 30.769 0.00 0.00 0.00 2.29
3384 11069 7.978414 TGAACACATATTTCAGCAACTTTTTCA 59.022 29.630 0.00 0.00 0.00 2.69
3385 11070 8.891671 AACACATATTTCAGCAACTTTTTCAT 57.108 26.923 0.00 0.00 0.00 2.57
3386 11071 8.301730 ACACATATTTCAGCAACTTTTTCATG 57.698 30.769 0.00 0.00 0.00 3.07
3387 11072 7.927629 ACACATATTTCAGCAACTTTTTCATGT 59.072 29.630 0.00 0.00 0.00 3.21
3388 11073 9.409312 CACATATTTCAGCAACTTTTTCATGTA 57.591 29.630 0.00 0.00 0.00 2.29
3391 11076 7.801547 ATTTCAGCAACTTTTTCATGTATCG 57.198 32.000 0.00 0.00 0.00 2.92
3392 11077 6.552859 TTCAGCAACTTTTTCATGTATCGA 57.447 33.333 0.00 0.00 0.00 3.59
3393 11078 6.169419 TCAGCAACTTTTTCATGTATCGAG 57.831 37.500 0.00 0.00 0.00 4.04
3394 11079 4.790140 CAGCAACTTTTTCATGTATCGAGC 59.210 41.667 0.00 0.00 0.00 5.03
3395 11080 4.098416 GCAACTTTTTCATGTATCGAGCC 58.902 43.478 0.00 0.00 0.00 4.70
3396 11081 4.142600 GCAACTTTTTCATGTATCGAGCCT 60.143 41.667 0.00 0.00 0.00 4.58
3397 11082 5.619981 GCAACTTTTTCATGTATCGAGCCTT 60.620 40.000 0.00 0.00 0.00 4.35
3398 11083 6.381801 CAACTTTTTCATGTATCGAGCCTTT 58.618 36.000 0.00 0.00 0.00 3.11
3399 11084 6.575162 ACTTTTTCATGTATCGAGCCTTTT 57.425 33.333 0.00 0.00 0.00 2.27
3400 11085 6.981722 ACTTTTTCATGTATCGAGCCTTTTT 58.018 32.000 0.00 0.00 0.00 1.94
3424 11109 8.801715 TTTTTCTGTGAAAGCAATCATTAGAC 57.198 30.769 7.63 0.00 30.26 2.59
3425 11110 5.784750 TCTGTGAAAGCAATCATTAGACG 57.215 39.130 0.00 0.00 0.00 4.18
3426 11111 4.631377 TCTGTGAAAGCAATCATTAGACGG 59.369 41.667 0.00 0.00 0.00 4.79
3427 11112 4.323417 TGTGAAAGCAATCATTAGACGGT 58.677 39.130 0.00 0.00 0.00 4.83
3428 11113 5.483811 TGTGAAAGCAATCATTAGACGGTA 58.516 37.500 0.00 0.00 0.00 4.02
3429 11114 5.580691 TGTGAAAGCAATCATTAGACGGTAG 59.419 40.000 0.00 0.00 0.00 3.18
3430 11115 5.006746 GTGAAAGCAATCATTAGACGGTAGG 59.993 44.000 0.00 0.00 0.00 3.18
3431 11116 5.105106 TGAAAGCAATCATTAGACGGTAGGA 60.105 40.000 0.00 0.00 0.00 2.94
3432 11117 4.323553 AGCAATCATTAGACGGTAGGAC 57.676 45.455 0.00 0.00 0.00 3.85
3433 11118 3.704566 AGCAATCATTAGACGGTAGGACA 59.295 43.478 0.00 0.00 0.00 4.02
3434 11119 4.345257 AGCAATCATTAGACGGTAGGACAT 59.655 41.667 0.00 0.00 0.00 3.06
3435 11120 4.449068 GCAATCATTAGACGGTAGGACATG 59.551 45.833 0.00 0.00 0.00 3.21
3436 11121 5.601662 CAATCATTAGACGGTAGGACATGT 58.398 41.667 0.00 0.00 0.00 3.21
3437 11122 5.871396 ATCATTAGACGGTAGGACATGTT 57.129 39.130 0.00 0.00 0.00 2.71
3438 11123 5.258456 TCATTAGACGGTAGGACATGTTC 57.742 43.478 0.00 0.00 0.00 3.18
3439 11124 3.770263 TTAGACGGTAGGACATGTTCG 57.230 47.619 0.00 2.58 0.00 3.95
3440 11125 1.542492 AGACGGTAGGACATGTTCGT 58.458 50.000 0.00 5.86 0.00 3.85
3441 11126 2.715046 AGACGGTAGGACATGTTCGTA 58.285 47.619 0.00 0.00 0.00 3.43
3442 11127 2.681848 AGACGGTAGGACATGTTCGTAG 59.318 50.000 0.00 0.00 0.00 3.51
3443 11128 2.679837 GACGGTAGGACATGTTCGTAGA 59.320 50.000 0.00 0.00 0.00 2.59
3444 11129 3.285484 ACGGTAGGACATGTTCGTAGAT 58.715 45.455 0.00 0.00 35.04 1.98
3445 11130 4.454678 ACGGTAGGACATGTTCGTAGATA 58.545 43.478 0.00 0.00 35.04 1.98
3446 11131 4.883585 ACGGTAGGACATGTTCGTAGATAA 59.116 41.667 0.00 0.00 35.04 1.75
3447 11132 5.533903 ACGGTAGGACATGTTCGTAGATAAT 59.466 40.000 0.00 0.00 35.04 1.28
3448 11133 6.040166 ACGGTAGGACATGTTCGTAGATAATT 59.960 38.462 0.00 0.00 35.04 1.40
3449 11134 6.921857 CGGTAGGACATGTTCGTAGATAATTT 59.078 38.462 0.00 0.00 35.04 1.82
3450 11135 8.077991 CGGTAGGACATGTTCGTAGATAATTTA 58.922 37.037 0.00 0.00 35.04 1.40
3451 11136 9.924650 GGTAGGACATGTTCGTAGATAATTTAT 57.075 33.333 0.00 0.00 35.04 1.40
3496 11181 7.737972 TTGTTAAGAATACTGTAAAGCTGCA 57.262 32.000 1.02 0.00 0.00 4.41
3497 11182 7.737972 TGTTAAGAATACTGTAAAGCTGCAA 57.262 32.000 1.02 0.00 0.00 4.08
3498 11183 7.806690 TGTTAAGAATACTGTAAAGCTGCAAG 58.193 34.615 1.02 0.00 0.00 4.01
3499 11184 7.659799 TGTTAAGAATACTGTAAAGCTGCAAGA 59.340 33.333 1.02 0.00 34.07 3.02
3500 11185 8.504005 GTTAAGAATACTGTAAAGCTGCAAGAA 58.496 33.333 1.02 0.00 34.07 2.52
3501 11186 6.487689 AGAATACTGTAAAGCTGCAAGAAC 57.512 37.500 1.02 0.00 34.07 3.01
3502 11187 5.997746 AGAATACTGTAAAGCTGCAAGAACA 59.002 36.000 1.02 0.00 34.07 3.18
3503 11188 6.656693 AGAATACTGTAAAGCTGCAAGAACAT 59.343 34.615 1.02 0.00 34.07 2.71
3504 11189 6.824305 ATACTGTAAAGCTGCAAGAACATT 57.176 33.333 1.02 0.00 34.07 2.71
3505 11190 5.520376 ACTGTAAAGCTGCAAGAACATTT 57.480 34.783 1.02 0.00 34.07 2.32
3506 11191 5.906073 ACTGTAAAGCTGCAAGAACATTTT 58.094 33.333 1.02 0.00 34.07 1.82
3507 11192 7.038154 ACTGTAAAGCTGCAAGAACATTTTA 57.962 32.000 1.02 0.00 34.07 1.52
3508 11193 7.661040 ACTGTAAAGCTGCAAGAACATTTTAT 58.339 30.769 1.02 0.00 34.07 1.40
3509 11194 7.596248 ACTGTAAAGCTGCAAGAACATTTTATG 59.404 33.333 1.02 0.00 34.07 1.90
3510 11195 6.867816 TGTAAAGCTGCAAGAACATTTTATGG 59.132 34.615 1.02 0.00 34.07 2.74
3511 11196 5.473066 AAGCTGCAAGAACATTTTATGGT 57.527 34.783 1.02 0.00 34.07 3.55
3524 11209 9.634163 GAACATTTTATGGTCCTTTTATCGTTT 57.366 29.630 0.00 0.00 41.13 3.60
3525 11210 9.990360 AACATTTTATGGTCCTTTTATCGTTTT 57.010 25.926 0.00 0.00 33.60 2.43
3526 11211 9.990360 ACATTTTATGGTCCTTTTATCGTTTTT 57.010 25.926 0.00 0.00 33.60 1.94
3531 11216 7.940178 ATGGTCCTTTTATCGTTTTTGAAAC 57.060 32.000 0.00 0.00 0.00 2.78
3532 11217 6.864342 TGGTCCTTTTATCGTTTTTGAAACA 58.136 32.000 4.65 0.00 0.00 2.83
3533 11218 7.493367 TGGTCCTTTTATCGTTTTTGAAACAT 58.507 30.769 4.65 0.89 0.00 2.71
3534 11219 8.630917 TGGTCCTTTTATCGTTTTTGAAACATA 58.369 29.630 4.65 0.14 0.00 2.29
3535 11220 9.634163 GGTCCTTTTATCGTTTTTGAAACATAT 57.366 29.630 4.65 0.63 0.00 1.78
3673 11358 9.130661 TCAATGAAAACTTAATCTTGTCTTCCA 57.869 29.630 0.00 0.00 0.00 3.53
3674 11359 9.748708 CAATGAAAACTTAATCTTGTCTTCCAA 57.251 29.630 0.00 0.00 0.00 3.53
3675 11360 9.750125 AATGAAAACTTAATCTTGTCTTCCAAC 57.250 29.630 0.00 0.00 0.00 3.77
3676 11361 7.712797 TGAAAACTTAATCTTGTCTTCCAACC 58.287 34.615 0.00 0.00 0.00 3.77
3677 11362 6.650427 AAACTTAATCTTGTCTTCCAACCC 57.350 37.500 0.00 0.00 0.00 4.11
3678 11363 5.319043 ACTTAATCTTGTCTTCCAACCCA 57.681 39.130 0.00 0.00 0.00 4.51
3679 11364 5.070685 ACTTAATCTTGTCTTCCAACCCAC 58.929 41.667 0.00 0.00 0.00 4.61
3680 11365 3.593442 AATCTTGTCTTCCAACCCACA 57.407 42.857 0.00 0.00 0.00 4.17
3681 11366 2.638480 TCTTGTCTTCCAACCCACAG 57.362 50.000 0.00 0.00 0.00 3.66
3682 11367 0.954452 CTTGTCTTCCAACCCACAGC 59.046 55.000 0.00 0.00 0.00 4.40
3683 11368 0.257328 TTGTCTTCCAACCCACAGCA 59.743 50.000 0.00 0.00 0.00 4.41
3684 11369 0.478072 TGTCTTCCAACCCACAGCAT 59.522 50.000 0.00 0.00 0.00 3.79
3685 11370 0.883833 GTCTTCCAACCCACAGCATG 59.116 55.000 0.00 0.00 46.00 4.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 6.480524 TGAACAATTTGTAATCAGAGGTCG 57.519 37.500 1.76 0.00 0.00 4.79
49 50 6.088824 GTGCTGAACAATTTGTAATCAGAGG 58.911 40.000 25.15 8.93 37.39 3.69
50 51 6.671190 TGTGCTGAACAATTTGTAATCAGAG 58.329 36.000 25.15 9.45 37.39 3.35
51 52 6.294120 CCTGTGCTGAACAATTTGTAATCAGA 60.294 38.462 25.15 13.32 37.39 3.27
52 53 5.860182 CCTGTGCTGAACAATTTGTAATCAG 59.140 40.000 19.93 19.93 37.94 2.90
100 101 1.337703 TGTGCTGAACATGCTTGGAAC 59.662 47.619 4.44 0.00 32.36 3.62
101 102 1.610038 CTGTGCTGAACATGCTTGGAA 59.390 47.619 4.44 0.00 38.39 3.53
103 104 0.242825 CCTGTGCTGAACATGCTTGG 59.757 55.000 4.44 0.00 38.39 3.61
115 130 2.290514 ACTGTACATGCAATCCTGTGCT 60.291 45.455 7.60 0.00 45.17 4.40
116 131 2.086869 ACTGTACATGCAATCCTGTGC 58.913 47.619 0.00 0.38 45.15 4.57
119 134 3.603532 ACTGACTGTACATGCAATCCTG 58.396 45.455 0.00 0.00 0.00 3.86
137 179 3.509575 GGAGCTGACCCTGATATAGACTG 59.490 52.174 0.00 0.00 0.00 3.51
138 180 3.401002 AGGAGCTGACCCTGATATAGACT 59.599 47.826 0.00 0.00 31.66 3.24
139 181 3.773560 AGGAGCTGACCCTGATATAGAC 58.226 50.000 0.00 0.00 31.66 2.59
190 232 5.750067 CAGGGTATCACATTTTTAGCAATGC 59.250 40.000 0.00 0.00 37.63 3.56
335 383 2.124024 GGATGATGCTGCAGGCCA 60.124 61.111 17.12 6.13 40.92 5.36
336 384 1.735376 CTTGGATGATGCTGCAGGCC 61.735 60.000 17.12 0.00 40.92 5.19
337 385 0.750546 TCTTGGATGATGCTGCAGGC 60.751 55.000 17.12 8.54 42.22 4.85
338 386 1.758936 TTCTTGGATGATGCTGCAGG 58.241 50.000 17.12 0.00 0.00 4.85
339 387 2.031944 CGATTCTTGGATGATGCTGCAG 60.032 50.000 10.11 10.11 0.00 4.41
340 388 1.944709 CGATTCTTGGATGATGCTGCA 59.055 47.619 4.13 4.13 0.00 4.41
347 395 0.527600 CGTCGGCGATTCTTGGATGA 60.528 55.000 14.79 0.00 41.33 2.92
366 414 0.179006 GGATCTCATGGCCCCTTGTC 60.179 60.000 0.00 0.00 0.00 3.18
398 446 0.390866 CATTCCTCGTCACAGCAGCT 60.391 55.000 0.00 0.00 0.00 4.24
407 455 0.394565 CCCCAGATCCATTCCTCGTC 59.605 60.000 0.00 0.00 0.00 4.20
440 504 1.624391 GGCCAGGAGAGGTAAACCCTA 60.624 57.143 0.00 0.00 46.51 3.53
445 509 2.666098 GCCGGCCAGGAGAGGTAAA 61.666 63.158 18.11 0.00 45.00 2.01
605 673 2.501610 GTGCTGATCGGGGACTCC 59.498 66.667 3.14 0.00 0.00 3.85
712 791 0.957395 GCAGTAGCAGCAGCAAGGAA 60.957 55.000 3.17 0.00 45.49 3.36
727 841 1.963338 GCAGCCAACGAGAAGCAGT 60.963 57.895 0.00 0.00 0.00 4.40
740 854 1.375268 GATCTATCCAGCCGCAGCC 60.375 63.158 0.00 0.00 41.25 4.85
741 855 1.735920 CGATCTATCCAGCCGCAGC 60.736 63.158 0.00 0.00 40.32 5.25
742 856 0.881796 TACGATCTATCCAGCCGCAG 59.118 55.000 0.00 0.00 0.00 5.18
743 857 1.472878 GATACGATCTATCCAGCCGCA 59.527 52.381 0.00 0.00 0.00 5.69
744 858 1.472878 TGATACGATCTATCCAGCCGC 59.527 52.381 0.00 0.00 0.00 6.53
745 859 2.476352 CGTGATACGATCTATCCAGCCG 60.476 54.545 0.00 0.00 46.05 5.52
771 885 2.983592 CGGAAGCCACAACCACCC 60.984 66.667 0.00 0.00 0.00 4.61
895 1042 3.829226 CAGCCCAGGCCCATCCAT 61.829 66.667 4.70 0.00 43.17 3.41
914 1061 1.068588 TGTGAAGTGAACCGAGTGAGG 59.931 52.381 0.00 0.00 37.30 3.86
938 1085 2.045536 GACTGGCTCCTGGGCTTG 60.046 66.667 7.03 3.80 41.48 4.01
939 1086 2.530151 TGACTGGCTCCTGGGCTT 60.530 61.111 7.03 0.00 41.48 4.35
940 1087 3.325753 GTGACTGGCTCCTGGGCT 61.326 66.667 7.03 0.00 41.48 5.19
941 1088 3.640407 TGTGACTGGCTCCTGGGC 61.640 66.667 0.00 0.00 41.27 5.36
942 1089 2.177594 GAGTGTGACTGGCTCCTGGG 62.178 65.000 0.00 0.00 0.00 4.45
957 1117 0.038159 GGAGTGGAGTGAACCGAGTG 60.038 60.000 0.00 0.00 0.00 3.51
959 1119 0.038159 GTGGAGTGGAGTGAACCGAG 60.038 60.000 0.00 0.00 0.00 4.63
960 1120 0.469331 AGTGGAGTGGAGTGAACCGA 60.469 55.000 0.00 0.00 0.00 4.69
962 1122 0.321996 GGAGTGGAGTGGAGTGAACC 59.678 60.000 0.00 0.00 0.00 3.62
965 1125 0.188587 AGTGGAGTGGAGTGGAGTGA 59.811 55.000 0.00 0.00 0.00 3.41
1077 1238 3.934962 GCGAGGATGAGGGGGAGC 61.935 72.222 0.00 0.00 0.00 4.70
1132 1312 2.036572 GTCATCCCGGCCCCAAAA 59.963 61.111 0.00 0.00 0.00 2.44
1216 1398 3.157252 GAGATCAGAGGCGCCCCA 61.157 66.667 26.15 4.45 0.00 4.96
1220 1402 4.959596 GCCCGAGATCAGAGGCGC 62.960 72.222 0.00 0.00 35.30 6.53
1264 1456 4.430765 CGGACGGAACCCCAGACG 62.431 72.222 0.00 0.00 0.00 4.18
1388 1591 1.407258 CAACCGTCCAACCAAACACAT 59.593 47.619 0.00 0.00 0.00 3.21
1403 1607 0.306533 CTTTCACCGAACACCAACCG 59.693 55.000 0.00 0.00 0.00 4.44
1466 1686 3.790334 TTCTCCGCCGCCATCATCG 62.790 63.158 0.00 0.00 0.00 3.84
1929 2509 6.982724 TGTGTAGCTTCTCAGATGTATTGATG 59.017 38.462 0.00 0.00 0.00 3.07
1950 2530 5.817816 GCACAGGATTAGCTTACTTATGTGT 59.182 40.000 14.85 0.00 38.18 3.72
1992 2572 1.109920 ATCCGATGCCGACTAGTGCT 61.110 55.000 0.00 0.00 38.22 4.40
2007 2587 3.381590 TGAGAATCTGACTGGTGTATCCG 59.618 47.826 0.00 0.00 35.65 4.18
2085 2665 6.402550 CCTGGTAAAATGACATGTCTTCGAAG 60.403 42.308 25.55 19.35 0.00 3.79
2125 2705 1.523758 AGGTTCTCGTCATTGGCAAC 58.476 50.000 0.00 0.00 0.00 4.17
2377 10022 2.363359 CAGCCTCAAAAACCTCAAAGCT 59.637 45.455 0.00 0.00 0.00 3.74
2379 10024 3.633986 AGTCAGCCTCAAAAACCTCAAAG 59.366 43.478 0.00 0.00 0.00 2.77
2391 10036 2.224597 TGAATGCTCAAAGTCAGCCTCA 60.225 45.455 0.00 0.00 35.89 3.86
2431 10076 0.686789 AACATCAAAGCCCCCAAAGC 59.313 50.000 0.00 0.00 0.00 3.51
2443 10088 2.304761 ACCTTCGCCCTAGAAACATCAA 59.695 45.455 0.00 0.00 0.00 2.57
2446 10097 1.679032 GCACCTTCGCCCTAGAAACAT 60.679 52.381 0.00 0.00 0.00 2.71
2474 10125 3.625764 CCGAAACTGAGACAAGGACAAAA 59.374 43.478 0.00 0.00 0.00 2.44
2492 10143 2.306847 TGTGATCATCGAGGATCCGAA 58.693 47.619 30.84 17.05 42.41 4.30
2494 10145 2.873609 GATGTGATCATCGAGGATCCG 58.126 52.381 30.84 0.00 42.41 4.18
2504 10155 7.949690 TCATCCAAGAAAAAGATGTGATCAT 57.050 32.000 0.00 0.00 38.79 2.45
2543 10194 4.384098 CCTTGTCATAGCCATACTCCACAA 60.384 45.833 0.00 0.00 0.00 3.33
2607 10258 2.160205 TCTCGATGAACAGAACGGACT 58.840 47.619 0.00 0.00 0.00 3.85
2624 10275 3.134458 CCACGCTTCCAGGAAATATCTC 58.866 50.000 2.72 0.00 0.00 2.75
2679 10330 4.821589 CCTCCGCTTCAGTCCCGC 62.822 72.222 0.00 0.00 0.00 6.13
2681 10332 2.113243 AACACCTCCGCTTCAGTCCC 62.113 60.000 0.00 0.00 0.00 4.46
2693 10344 7.097834 GCATAGGGATAACAGTATAACACCTC 58.902 42.308 0.00 0.00 0.00 3.85
2729 10390 1.195442 TGGCACGGTCAGATAACCCA 61.195 55.000 0.00 0.00 35.79 4.51
2730 10391 0.180406 ATGGCACGGTCAGATAACCC 59.820 55.000 0.00 0.00 35.79 4.11
2747 10408 3.058016 CCCACTGAACAACAACAGCTATG 60.058 47.826 0.00 0.00 37.61 2.23
2752 10413 3.866883 AAACCCACTGAACAACAACAG 57.133 42.857 0.00 0.00 39.65 3.16
2795 10456 4.082190 CCATACATACCACGGTCAGATAGG 60.082 50.000 0.00 0.00 0.00 2.57
2825 10494 1.073923 GGGTTCCACTGAAGACCACAT 59.926 52.381 0.00 0.00 31.90 3.21
2832 10501 1.542915 CTTGCATGGGTTCCACTGAAG 59.457 52.381 0.00 0.00 35.80 3.02
2860 10529 9.482627 AGCTCAGATAAATTACTACTAATGCAC 57.517 33.333 0.00 0.00 0.00 4.57
2884 10558 3.003480 CAGGCAAACAGAGTAACCTAGC 58.997 50.000 0.00 0.00 0.00 3.42
2900 10576 5.479027 TCAGACAAGTACTAATACACAGGCA 59.521 40.000 0.00 0.00 33.30 4.75
2902 10578 7.603651 AGTTCAGACAAGTACTAATACACAGG 58.396 38.462 0.00 0.00 33.30 4.00
2929 10614 5.574891 TGCATATCAACCACCACAATTAC 57.425 39.130 0.00 0.00 0.00 1.89
2931 10616 4.621274 GCTTGCATATCAACCACCACAATT 60.621 41.667 0.00 0.00 0.00 2.32
2934 10619 1.818060 GCTTGCATATCAACCACCACA 59.182 47.619 0.00 0.00 0.00 4.17
2940 10625 5.567138 AGTTAACAGCTTGCATATCAACC 57.433 39.130 8.61 0.00 0.00 3.77
2941 10626 6.185399 CGTAGTTAACAGCTTGCATATCAAC 58.815 40.000 8.61 0.00 0.00 3.18
2942 10627 5.293324 CCGTAGTTAACAGCTTGCATATCAA 59.707 40.000 8.61 0.00 0.00 2.57
2943 10628 4.808895 CCGTAGTTAACAGCTTGCATATCA 59.191 41.667 8.61 0.00 0.00 2.15
2944 10629 4.318831 GCCGTAGTTAACAGCTTGCATATC 60.319 45.833 8.61 0.00 0.00 1.63
2945 10630 3.560068 GCCGTAGTTAACAGCTTGCATAT 59.440 43.478 8.61 0.00 0.00 1.78
2984 10669 2.026014 GCACAGGCAACAACCACG 59.974 61.111 0.00 0.00 40.72 4.94
2991 10676 0.948678 TTTTCGTAGGCACAGGCAAC 59.051 50.000 0.00 0.00 43.71 4.17
3010 10695 8.854117 AGAGAAGAAGTTATGCATTTTGAGTTT 58.146 29.630 3.54 0.00 0.00 2.66
3012 10697 7.446625 ACAGAGAAGAAGTTATGCATTTTGAGT 59.553 33.333 3.54 0.00 0.00 3.41
3015 10700 9.713740 GATACAGAGAAGAAGTTATGCATTTTG 57.286 33.333 3.54 0.00 0.00 2.44
3025 10710 7.605691 CCATGTCAAAGATACAGAGAAGAAGTT 59.394 37.037 0.00 0.00 0.00 2.66
3029 10714 6.401394 CACCATGTCAAAGATACAGAGAAGA 58.599 40.000 0.00 0.00 0.00 2.87
3033 10718 3.624861 GCCACCATGTCAAAGATACAGAG 59.375 47.826 0.00 0.00 0.00 3.35
3038 10723 3.737559 AAGGCCACCATGTCAAAGATA 57.262 42.857 5.01 0.00 0.00 1.98
3046 10731 5.387113 TCAGATATAAAAGGCCACCATGT 57.613 39.130 5.01 0.00 0.00 3.21
3053 10738 8.430431 AGTAACCTAGTTCAGATATAAAAGGCC 58.570 37.037 0.00 0.00 0.00 5.19
3054 10739 9.478768 GAGTAACCTAGTTCAGATATAAAAGGC 57.521 37.037 0.00 0.00 0.00 4.35
3061 10746 9.924010 ACTAACAGAGTAACCTAGTTCAGATAT 57.076 33.333 0.00 0.00 36.27 1.63
3062 10747 9.750783 AACTAACAGAGTAACCTAGTTCAGATA 57.249 33.333 0.00 0.00 37.44 1.98
3063 10748 8.653036 AACTAACAGAGTAACCTAGTTCAGAT 57.347 34.615 0.00 0.00 37.44 2.90
3064 10749 9.007901 GTAACTAACAGAGTAACCTAGTTCAGA 57.992 37.037 0.00 0.00 37.44 3.27
3065 10750 8.790718 TGTAACTAACAGAGTAACCTAGTTCAG 58.209 37.037 0.00 0.00 37.44 3.02
3066 10751 8.696043 TGTAACTAACAGAGTAACCTAGTTCA 57.304 34.615 0.00 0.00 37.44 3.18
3091 10776 9.924010 ATTAGTTCAGAGTACCAGTATAAGACT 57.076 33.333 0.00 0.00 39.82 3.24
3098 10783 9.263446 ACCATAAATTAGTTCAGAGTACCAGTA 57.737 33.333 0.00 0.00 0.00 2.74
3099 10784 8.147244 ACCATAAATTAGTTCAGAGTACCAGT 57.853 34.615 0.00 0.00 0.00 4.00
3100 10785 7.435488 CGACCATAAATTAGTTCAGAGTACCAG 59.565 40.741 0.00 0.00 0.00 4.00
3101 10786 7.093640 ACGACCATAAATTAGTTCAGAGTACCA 60.094 37.037 0.00 0.00 0.00 3.25
3102 10787 7.263496 ACGACCATAAATTAGTTCAGAGTACC 58.737 38.462 0.00 0.00 0.00 3.34
3103 10788 8.699283 AACGACCATAAATTAGTTCAGAGTAC 57.301 34.615 0.00 0.00 0.00 2.73
3105 10790 9.886132 ATTAACGACCATAAATTAGTTCAGAGT 57.114 29.630 0.00 0.00 0.00 3.24
3107 10792 9.661563 ACATTAACGACCATAAATTAGTTCAGA 57.338 29.630 0.00 0.00 0.00 3.27
3108 10793 9.702726 CACATTAACGACCATAAATTAGTTCAG 57.297 33.333 0.00 0.00 0.00 3.02
3109 10794 9.438228 TCACATTAACGACCATAAATTAGTTCA 57.562 29.630 0.00 0.00 0.00 3.18
3112 10797 8.395633 GCTTCACATTAACGACCATAAATTAGT 58.604 33.333 0.00 0.00 0.00 2.24
3113 10798 8.612619 AGCTTCACATTAACGACCATAAATTAG 58.387 33.333 0.00 0.00 0.00 1.73
3114 10799 8.394877 CAGCTTCACATTAACGACCATAAATTA 58.605 33.333 0.00 0.00 0.00 1.40
3115 10800 7.094377 ACAGCTTCACATTAACGACCATAAATT 60.094 33.333 0.00 0.00 0.00 1.82
3116 10801 6.374333 ACAGCTTCACATTAACGACCATAAAT 59.626 34.615 0.00 0.00 0.00 1.40
3117 10802 5.703592 ACAGCTTCACATTAACGACCATAAA 59.296 36.000 0.00 0.00 0.00 1.40
3118 10803 5.242434 ACAGCTTCACATTAACGACCATAA 58.758 37.500 0.00 0.00 0.00 1.90
3119 10804 4.827692 ACAGCTTCACATTAACGACCATA 58.172 39.130 0.00 0.00 0.00 2.74
3120 10805 3.674997 ACAGCTTCACATTAACGACCAT 58.325 40.909 0.00 0.00 0.00 3.55
3121 10806 3.120321 ACAGCTTCACATTAACGACCA 57.880 42.857 0.00 0.00 0.00 4.02
3122 10807 5.178809 AGTTAACAGCTTCACATTAACGACC 59.821 40.000 8.61 0.00 40.72 4.79
3123 10808 6.071463 CAGTTAACAGCTTCACATTAACGAC 58.929 40.000 8.61 0.00 40.72 4.34
3124 10809 5.333798 GCAGTTAACAGCTTCACATTAACGA 60.334 40.000 15.09 0.00 40.72 3.85
3125 10810 4.846137 GCAGTTAACAGCTTCACATTAACG 59.154 41.667 15.09 0.00 40.72 3.18
3126 10811 5.757886 TGCAGTTAACAGCTTCACATTAAC 58.242 37.500 21.64 0.00 37.65 2.01
3127 10812 6.573664 ATGCAGTTAACAGCTTCACATTAA 57.426 33.333 21.64 1.01 0.00 1.40
3128 10813 6.380995 CAATGCAGTTAACAGCTTCACATTA 58.619 36.000 21.64 1.69 0.00 1.90
3129 10814 5.224888 CAATGCAGTTAACAGCTTCACATT 58.775 37.500 21.64 11.02 0.00 2.71
3130 10815 4.321452 CCAATGCAGTTAACAGCTTCACAT 60.321 41.667 21.64 5.85 0.00 3.21
3131 10816 3.004629 CCAATGCAGTTAACAGCTTCACA 59.995 43.478 21.64 3.75 0.00 3.58
3132 10817 3.004734 ACCAATGCAGTTAACAGCTTCAC 59.995 43.478 21.64 0.00 0.00 3.18
3133 10818 3.221771 ACCAATGCAGTTAACAGCTTCA 58.778 40.909 21.64 4.45 0.00 3.02
3134 10819 3.503748 AGACCAATGCAGTTAACAGCTTC 59.496 43.478 21.64 11.12 0.00 3.86
3135 10820 3.490348 AGACCAATGCAGTTAACAGCTT 58.510 40.909 21.64 13.90 0.00 3.74
3136 10821 3.146104 AGACCAATGCAGTTAACAGCT 57.854 42.857 21.64 6.80 0.00 4.24
3137 10822 3.253188 TGAAGACCAATGCAGTTAACAGC 59.747 43.478 15.46 15.46 0.00 4.40
3138 10823 5.009010 AGTTGAAGACCAATGCAGTTAACAG 59.991 40.000 8.61 0.17 37.08 3.16
3139 10824 4.887071 AGTTGAAGACCAATGCAGTTAACA 59.113 37.500 8.61 0.00 37.08 2.41
3140 10825 5.215160 CAGTTGAAGACCAATGCAGTTAAC 58.785 41.667 0.00 0.00 37.08 2.01
3141 10826 4.278170 CCAGTTGAAGACCAATGCAGTTAA 59.722 41.667 0.00 0.00 37.08 2.01
3142 10827 3.820467 CCAGTTGAAGACCAATGCAGTTA 59.180 43.478 0.00 0.00 37.08 2.24
3143 10828 2.624838 CCAGTTGAAGACCAATGCAGTT 59.375 45.455 0.00 0.00 37.08 3.16
3144 10829 2.233271 CCAGTTGAAGACCAATGCAGT 58.767 47.619 0.00 0.00 37.08 4.40
3145 10830 2.233271 ACCAGTTGAAGACCAATGCAG 58.767 47.619 0.00 0.00 37.08 4.41
3146 10831 2.363306 ACCAGTTGAAGACCAATGCA 57.637 45.000 0.00 0.00 37.08 3.96
3147 10832 2.162408 GCTACCAGTTGAAGACCAATGC 59.838 50.000 0.00 0.00 37.08 3.56
3148 10833 3.679389 AGCTACCAGTTGAAGACCAATG 58.321 45.455 0.00 0.00 37.08 2.82
3149 10834 3.584848 AGAGCTACCAGTTGAAGACCAAT 59.415 43.478 0.00 0.00 37.08 3.16
3150 10835 2.972713 AGAGCTACCAGTTGAAGACCAA 59.027 45.455 0.00 0.00 0.00 3.67
3151 10836 2.300152 CAGAGCTACCAGTTGAAGACCA 59.700 50.000 0.00 0.00 0.00 4.02
3152 10837 2.563179 TCAGAGCTACCAGTTGAAGACC 59.437 50.000 0.00 0.00 0.00 3.85
3153 10838 3.944055 TCAGAGCTACCAGTTGAAGAC 57.056 47.619 0.00 0.00 0.00 3.01
3154 10839 4.284490 ACAATCAGAGCTACCAGTTGAAGA 59.716 41.667 0.00 0.00 0.00 2.87
3155 10840 4.573900 ACAATCAGAGCTACCAGTTGAAG 58.426 43.478 0.00 0.00 0.00 3.02
3156 10841 4.623932 ACAATCAGAGCTACCAGTTGAA 57.376 40.909 0.00 0.00 0.00 2.69
3157 10842 4.202357 ACAACAATCAGAGCTACCAGTTGA 60.202 41.667 17.56 3.98 38.64 3.18
3158 10843 4.067896 ACAACAATCAGAGCTACCAGTTG 58.932 43.478 12.05 12.05 40.48 3.16
3159 10844 4.357918 ACAACAATCAGAGCTACCAGTT 57.642 40.909 0.00 0.00 0.00 3.16
3160 10845 4.067896 CAACAACAATCAGAGCTACCAGT 58.932 43.478 0.00 0.00 0.00 4.00
3161 10846 4.067896 ACAACAACAATCAGAGCTACCAG 58.932 43.478 0.00 0.00 0.00 4.00
3162 10847 3.814842 CACAACAACAATCAGAGCTACCA 59.185 43.478 0.00 0.00 0.00 3.25
3163 10848 3.365364 GCACAACAACAATCAGAGCTACC 60.365 47.826 0.00 0.00 0.00 3.18
3164 10849 3.665323 CGCACAACAACAATCAGAGCTAC 60.665 47.826 0.00 0.00 0.00 3.58
3165 10850 2.480037 CGCACAACAACAATCAGAGCTA 59.520 45.455 0.00 0.00 0.00 3.32
3166 10851 1.265095 CGCACAACAACAATCAGAGCT 59.735 47.619 0.00 0.00 0.00 4.09
3167 10852 1.002468 ACGCACAACAACAATCAGAGC 60.002 47.619 0.00 0.00 0.00 4.09
3168 10853 4.397382 CATACGCACAACAACAATCAGAG 58.603 43.478 0.00 0.00 0.00 3.35
3169 10854 3.188254 CCATACGCACAACAACAATCAGA 59.812 43.478 0.00 0.00 0.00 3.27
3170 10855 3.188254 TCCATACGCACAACAACAATCAG 59.812 43.478 0.00 0.00 0.00 2.90
3171 10856 3.142174 TCCATACGCACAACAACAATCA 58.858 40.909 0.00 0.00 0.00 2.57
3172 10857 3.822594 TCCATACGCACAACAACAATC 57.177 42.857 0.00 0.00 0.00 2.67
3173 10858 3.818210 TCTTCCATACGCACAACAACAAT 59.182 39.130 0.00 0.00 0.00 2.71
3174 10859 3.206964 TCTTCCATACGCACAACAACAA 58.793 40.909 0.00 0.00 0.00 2.83
3175 10860 2.839975 TCTTCCATACGCACAACAACA 58.160 42.857 0.00 0.00 0.00 3.33
3176 10861 3.188460 ACATCTTCCATACGCACAACAAC 59.812 43.478 0.00 0.00 0.00 3.32
3177 10862 3.407698 ACATCTTCCATACGCACAACAA 58.592 40.909 0.00 0.00 0.00 2.83
3178 10863 3.052455 ACATCTTCCATACGCACAACA 57.948 42.857 0.00 0.00 0.00 3.33
3179 10864 4.419522 AAACATCTTCCATACGCACAAC 57.580 40.909 0.00 0.00 0.00 3.32
3180 10865 6.561737 TTTAAACATCTTCCATACGCACAA 57.438 33.333 0.00 0.00 0.00 3.33
3181 10866 6.375377 GTTTTAAACATCTTCCATACGCACA 58.625 36.000 2.62 0.00 0.00 4.57
3182 10867 5.506832 CGTTTTAAACATCTTCCATACGCAC 59.493 40.000 8.61 0.00 0.00 5.34
3183 10868 5.623335 CGTTTTAAACATCTTCCATACGCA 58.377 37.500 8.61 0.00 0.00 5.24
3184 10869 4.494410 GCGTTTTAAACATCTTCCATACGC 59.506 41.667 8.61 9.94 42.71 4.42
3185 10870 5.623335 TGCGTTTTAAACATCTTCCATACG 58.377 37.500 8.61 0.00 0.00 3.06
3186 10871 9.006215 GTTATGCGTTTTAAACATCTTCCATAC 57.994 33.333 8.61 0.00 0.00 2.39
3187 10872 8.952278 AGTTATGCGTTTTAAACATCTTCCATA 58.048 29.630 8.61 2.63 0.00 2.74
3188 10873 7.754924 CAGTTATGCGTTTTAAACATCTTCCAT 59.245 33.333 8.61 3.42 0.00 3.41
3189 10874 7.081349 CAGTTATGCGTTTTAAACATCTTCCA 58.919 34.615 8.61 0.00 0.00 3.53
3190 10875 6.033513 GCAGTTATGCGTTTTAAACATCTTCC 59.966 38.462 8.61 0.00 43.87 3.46
3191 10876 6.967498 GCAGTTATGCGTTTTAAACATCTTC 58.033 36.000 8.61 0.00 43.87 2.87
3192 10877 6.927933 GCAGTTATGCGTTTTAAACATCTT 57.072 33.333 8.61 0.83 43.87 2.40
3209 10894 9.489084 GACACCAATGATACATATAAGCAGTTA 57.511 33.333 0.00 0.00 0.00 2.24
3210 10895 7.445402 GGACACCAATGATACATATAAGCAGTT 59.555 37.037 0.00 0.00 0.00 3.16
3211 10896 6.936900 GGACACCAATGATACATATAAGCAGT 59.063 38.462 0.00 0.00 0.00 4.40
3212 10897 7.118825 CAGGACACCAATGATACATATAAGCAG 59.881 40.741 0.00 0.00 0.00 4.24
3213 10898 6.936335 CAGGACACCAATGATACATATAAGCA 59.064 38.462 0.00 0.00 0.00 3.91
3214 10899 6.372659 CCAGGACACCAATGATACATATAAGC 59.627 42.308 0.00 0.00 0.00 3.09
3215 10900 7.453393 ACCAGGACACCAATGATACATATAAG 58.547 38.462 0.00 0.00 0.00 1.73
3216 10901 7.292356 AGACCAGGACACCAATGATACATATAA 59.708 37.037 0.00 0.00 0.00 0.98
3217 10902 6.787458 AGACCAGGACACCAATGATACATATA 59.213 38.462 0.00 0.00 0.00 0.86
3218 10903 5.608437 AGACCAGGACACCAATGATACATAT 59.392 40.000 0.00 0.00 0.00 1.78
3219 10904 4.968719 AGACCAGGACACCAATGATACATA 59.031 41.667 0.00 0.00 0.00 2.29
3220 10905 3.782523 AGACCAGGACACCAATGATACAT 59.217 43.478 0.00 0.00 0.00 2.29
3221 10906 3.181329 AGACCAGGACACCAATGATACA 58.819 45.455 0.00 0.00 0.00 2.29
3222 10907 3.914426 AGACCAGGACACCAATGATAC 57.086 47.619 0.00 0.00 0.00 2.24
3223 10908 4.927267 AAAGACCAGGACACCAATGATA 57.073 40.909 0.00 0.00 0.00 2.15
3224 10909 3.814504 AAAGACCAGGACACCAATGAT 57.185 42.857 0.00 0.00 0.00 2.45
3225 10910 3.593442 AAAAGACCAGGACACCAATGA 57.407 42.857 0.00 0.00 0.00 2.57
3243 10928 7.814107 GTGCCAAATCATCACAGAATAGAAAAA 59.186 33.333 0.00 0.00 0.00 1.94
3244 10929 7.315142 GTGCCAAATCATCACAGAATAGAAAA 58.685 34.615 0.00 0.00 0.00 2.29
3245 10930 6.403527 CGTGCCAAATCATCACAGAATAGAAA 60.404 38.462 0.00 0.00 0.00 2.52
3246 10931 5.065090 CGTGCCAAATCATCACAGAATAGAA 59.935 40.000 0.00 0.00 0.00 2.10
3247 10932 4.571984 CGTGCCAAATCATCACAGAATAGA 59.428 41.667 0.00 0.00 0.00 1.98
3248 10933 4.260907 CCGTGCCAAATCATCACAGAATAG 60.261 45.833 0.00 0.00 0.00 1.73
3249 10934 3.627123 CCGTGCCAAATCATCACAGAATA 59.373 43.478 0.00 0.00 0.00 1.75
3250 10935 2.424601 CCGTGCCAAATCATCACAGAAT 59.575 45.455 0.00 0.00 0.00 2.40
3251 10936 1.811965 CCGTGCCAAATCATCACAGAA 59.188 47.619 0.00 0.00 0.00 3.02
3252 10937 1.271325 ACCGTGCCAAATCATCACAGA 60.271 47.619 0.00 0.00 0.00 3.41
3253 10938 1.135603 CACCGTGCCAAATCATCACAG 60.136 52.381 0.00 0.00 0.00 3.66
3254 10939 0.880441 CACCGTGCCAAATCATCACA 59.120 50.000 0.00 0.00 0.00 3.58
3255 10940 0.171007 CCACCGTGCCAAATCATCAC 59.829 55.000 0.00 0.00 0.00 3.06
3256 10941 0.251121 ACCACCGTGCCAAATCATCA 60.251 50.000 0.00 0.00 0.00 3.07
3257 10942 0.171007 CACCACCGTGCCAAATCATC 59.829 55.000 0.00 0.00 32.04 2.92
3258 10943 0.539438 ACACCACCGTGCCAAATCAT 60.539 50.000 0.00 0.00 44.40 2.45
3259 10944 1.152860 ACACCACCGTGCCAAATCA 60.153 52.632 0.00 0.00 44.40 2.57
3260 10945 1.285641 CACACCACCGTGCCAAATC 59.714 57.895 0.00 0.00 44.40 2.17
3261 10946 1.454847 ACACACCACCGTGCCAAAT 60.455 52.632 0.00 0.00 44.40 2.32
3262 10947 2.044848 ACACACCACCGTGCCAAA 60.045 55.556 0.00 0.00 44.40 3.28
3263 10948 2.826287 CACACACCACCGTGCCAA 60.826 61.111 0.00 0.00 44.40 4.52
3264 10949 3.787001 TCACACACCACCGTGCCA 61.787 61.111 0.00 0.00 44.40 4.92
3265 10950 3.276846 GTCACACACCACCGTGCC 61.277 66.667 0.00 0.00 44.40 5.01
3266 10951 2.203015 AGTCACACACCACCGTGC 60.203 61.111 0.00 0.00 44.40 5.34
3267 10952 1.594293 GGAGTCACACACCACCGTG 60.594 63.158 0.00 0.00 46.11 4.94
3268 10953 2.803817 GGGAGTCACACACCACCGT 61.804 63.158 0.00 0.00 29.85 4.83
3269 10954 2.030562 GGGAGTCACACACCACCG 59.969 66.667 0.00 0.00 29.85 4.94
3270 10955 1.071471 CAGGGAGTCACACACCACC 59.929 63.158 0.00 0.00 29.85 4.61
3271 10956 1.000955 CTACAGGGAGTCACACACCAC 59.999 57.143 0.00 0.00 29.85 4.16
3272 10957 1.338107 CTACAGGGAGTCACACACCA 58.662 55.000 0.00 0.00 29.85 4.17
3273 10958 1.000955 CACTACAGGGAGTCACACACC 59.999 57.143 0.00 0.00 0.00 4.16
3274 10959 1.000955 CCACTACAGGGAGTCACACAC 59.999 57.143 0.00 0.00 0.00 3.82
3275 10960 1.338107 CCACTACAGGGAGTCACACA 58.662 55.000 0.00 0.00 0.00 3.72
3276 10961 1.339097 ACCACTACAGGGAGTCACAC 58.661 55.000 0.00 0.00 0.00 3.82
3277 10962 2.377531 TCTACCACTACAGGGAGTCACA 59.622 50.000 0.00 0.00 40.74 3.58
3278 10963 3.083122 TCTACCACTACAGGGAGTCAC 57.917 52.381 0.00 0.00 40.74 3.67
3279 10964 4.332683 AATCTACCACTACAGGGAGTCA 57.667 45.455 0.00 0.00 40.74 3.41
3280 10965 4.466726 ACAAATCTACCACTACAGGGAGTC 59.533 45.833 0.00 0.00 40.74 3.36
3281 10966 4.426704 ACAAATCTACCACTACAGGGAGT 58.573 43.478 0.00 0.00 40.74 3.85
3282 10967 5.422214 AACAAATCTACCACTACAGGGAG 57.578 43.478 0.00 0.00 41.32 4.30
3283 10968 5.836024 AAACAAATCTACCACTACAGGGA 57.164 39.130 0.00 0.00 0.00 4.20
3284 10969 6.894339 AAAAACAAATCTACCACTACAGGG 57.106 37.500 0.00 0.00 0.00 4.45
3285 10970 7.390718 AGCTAAAAACAAATCTACCACTACAGG 59.609 37.037 0.00 0.00 0.00 4.00
3286 10971 8.230486 CAGCTAAAAACAAATCTACCACTACAG 58.770 37.037 0.00 0.00 0.00 2.74
3287 10972 7.934665 TCAGCTAAAAACAAATCTACCACTACA 59.065 33.333 0.00 0.00 0.00 2.74
3288 10973 8.319143 TCAGCTAAAAACAAATCTACCACTAC 57.681 34.615 0.00 0.00 0.00 2.73
3289 10974 8.911918 TTCAGCTAAAAACAAATCTACCACTA 57.088 30.769 0.00 0.00 0.00 2.74
3290 10975 7.502561 ACTTCAGCTAAAAACAAATCTACCACT 59.497 33.333 0.00 0.00 0.00 4.00
3291 10976 7.649057 ACTTCAGCTAAAAACAAATCTACCAC 58.351 34.615 0.00 0.00 0.00 4.16
3292 10977 7.817418 ACTTCAGCTAAAAACAAATCTACCA 57.183 32.000 0.00 0.00 0.00 3.25
3310 10995 4.669206 AGGATCATCACAGCTACTTCAG 57.331 45.455 0.00 0.00 0.00 3.02
3311 10996 5.450550 CGTAAGGATCATCACAGCTACTTCA 60.451 44.000 0.00 0.00 0.00 3.02
3312 10997 4.979197 CGTAAGGATCATCACAGCTACTTC 59.021 45.833 0.00 0.00 0.00 3.01
3313 10998 4.737946 GCGTAAGGATCATCACAGCTACTT 60.738 45.833 0.00 0.00 38.28 2.24
3314 10999 3.243569 GCGTAAGGATCATCACAGCTACT 60.244 47.826 0.00 0.00 38.28 2.57
3315 11000 3.053455 GCGTAAGGATCATCACAGCTAC 58.947 50.000 0.00 0.00 38.28 3.58
3316 11001 2.693074 TGCGTAAGGATCATCACAGCTA 59.307 45.455 0.00 0.00 38.28 3.32
3317 11002 1.482182 TGCGTAAGGATCATCACAGCT 59.518 47.619 0.00 0.00 38.28 4.24
3318 11003 1.863454 CTGCGTAAGGATCATCACAGC 59.137 52.381 0.00 0.00 36.74 4.40
3319 11004 3.170791 ACTGCGTAAGGATCATCACAG 57.829 47.619 0.00 0.00 36.74 3.66
3320 11005 3.261580 CAACTGCGTAAGGATCATCACA 58.738 45.455 0.00 0.00 36.74 3.58
3321 11006 3.062639 CACAACTGCGTAAGGATCATCAC 59.937 47.826 0.00 0.00 36.74 3.06
3322 11007 3.261580 CACAACTGCGTAAGGATCATCA 58.738 45.455 0.00 0.00 36.74 3.07
3323 11008 2.030946 GCACAACTGCGTAAGGATCATC 59.969 50.000 0.00 0.00 36.74 2.92
3324 11009 2.009774 GCACAACTGCGTAAGGATCAT 58.990 47.619 0.00 0.00 36.74 2.45
3325 11010 1.438651 GCACAACTGCGTAAGGATCA 58.561 50.000 0.00 0.00 36.74 2.92
3337 11022 1.134098 AGCCACACTAACAGCACAACT 60.134 47.619 0.00 0.00 0.00 3.16
3338 11023 1.308998 AGCCACACTAACAGCACAAC 58.691 50.000 0.00 0.00 0.00 3.32
3339 11024 1.675483 CAAGCCACACTAACAGCACAA 59.325 47.619 0.00 0.00 0.00 3.33
3340 11025 1.134250 TCAAGCCACACTAACAGCACA 60.134 47.619 0.00 0.00 0.00 4.57
3341 11026 1.593196 TCAAGCCACACTAACAGCAC 58.407 50.000 0.00 0.00 0.00 4.40
3342 11027 1.946768 GTTCAAGCCACACTAACAGCA 59.053 47.619 0.00 0.00 0.00 4.41
3343 11028 1.946768 TGTTCAAGCCACACTAACAGC 59.053 47.619 0.00 0.00 0.00 4.40
3344 11029 2.942376 TGTGTTCAAGCCACACTAACAG 59.058 45.455 4.92 0.00 44.24 3.16
3345 11030 2.992593 TGTGTTCAAGCCACACTAACA 58.007 42.857 4.92 0.00 44.24 2.41
3346 11031 5.880054 ATATGTGTTCAAGCCACACTAAC 57.120 39.130 4.92 0.00 44.90 2.34
3347 11032 6.488344 TGAAATATGTGTTCAAGCCACACTAA 59.512 34.615 4.92 0.00 44.90 2.24
3348 11033 6.000840 TGAAATATGTGTTCAAGCCACACTA 58.999 36.000 4.92 0.00 44.90 2.74
3349 11034 4.826733 TGAAATATGTGTTCAAGCCACACT 59.173 37.500 4.92 0.00 44.90 3.55
3350 11035 5.119931 TGAAATATGTGTTCAAGCCACAC 57.880 39.130 0.00 0.00 44.90 3.82
3351 11036 4.321156 GCTGAAATATGTGTTCAAGCCACA 60.321 41.667 0.00 0.00 46.03 4.17
3352 11037 4.168760 GCTGAAATATGTGTTCAAGCCAC 58.831 43.478 0.00 0.00 34.68 5.01
3353 11038 3.825585 TGCTGAAATATGTGTTCAAGCCA 59.174 39.130 0.00 0.00 34.68 4.75
3354 11039 4.439305 TGCTGAAATATGTGTTCAAGCC 57.561 40.909 0.00 0.00 34.68 4.35
3355 11040 5.464168 AGTTGCTGAAATATGTGTTCAAGC 58.536 37.500 0.00 0.00 34.68 4.01
3356 11041 7.935338 AAAGTTGCTGAAATATGTGTTCAAG 57.065 32.000 0.00 0.00 34.68 3.02
3357 11042 8.715191 AAAAAGTTGCTGAAATATGTGTTCAA 57.285 26.923 0.00 0.00 34.68 2.69
3358 11043 7.978414 TGAAAAAGTTGCTGAAATATGTGTTCA 59.022 29.630 0.00 0.00 33.97 3.18
3359 11044 8.351495 TGAAAAAGTTGCTGAAATATGTGTTC 57.649 30.769 0.00 0.00 0.00 3.18
3360 11045 8.767085 CATGAAAAAGTTGCTGAAATATGTGTT 58.233 29.630 0.00 0.00 0.00 3.32
3361 11046 7.927629 ACATGAAAAAGTTGCTGAAATATGTGT 59.072 29.630 0.00 0.00 0.00 3.72
3362 11047 8.301730 ACATGAAAAAGTTGCTGAAATATGTG 57.698 30.769 0.00 0.00 0.00 3.21
3365 11050 9.507280 CGATACATGAAAAAGTTGCTGAAATAT 57.493 29.630 0.00 0.00 0.00 1.28
3366 11051 8.726068 TCGATACATGAAAAAGTTGCTGAAATA 58.274 29.630 0.00 0.00 0.00 1.40
3367 11052 7.592938 TCGATACATGAAAAAGTTGCTGAAAT 58.407 30.769 0.00 0.00 0.00 2.17
3368 11053 6.964908 TCGATACATGAAAAAGTTGCTGAAA 58.035 32.000 0.00 0.00 0.00 2.69
3369 11054 6.552859 TCGATACATGAAAAAGTTGCTGAA 57.447 33.333 0.00 0.00 0.00 3.02
3370 11055 5.390885 GCTCGATACATGAAAAAGTTGCTGA 60.391 40.000 0.00 0.00 0.00 4.26
3371 11056 4.790140 GCTCGATACATGAAAAAGTTGCTG 59.210 41.667 0.00 0.00 0.00 4.41
3372 11057 4.142600 GGCTCGATACATGAAAAAGTTGCT 60.143 41.667 0.00 0.00 0.00 3.91
3373 11058 4.098416 GGCTCGATACATGAAAAAGTTGC 58.902 43.478 0.00 0.00 0.00 4.17
3374 11059 5.551760 AGGCTCGATACATGAAAAAGTTG 57.448 39.130 0.00 0.00 0.00 3.16
3375 11060 6.575162 AAAGGCTCGATACATGAAAAAGTT 57.425 33.333 0.00 0.00 0.00 2.66
3376 11061 6.575162 AAAAGGCTCGATACATGAAAAAGT 57.425 33.333 0.00 0.00 0.00 2.66
3399 11084 7.591057 CGTCTAATGATTGCTTTCACAGAAAAA 59.409 33.333 0.00 0.00 0.00 1.94
3400 11085 7.077605 CGTCTAATGATTGCTTTCACAGAAAA 58.922 34.615 0.00 0.00 0.00 2.29
3401 11086 6.348458 CCGTCTAATGATTGCTTTCACAGAAA 60.348 38.462 0.00 0.00 0.00 2.52
3402 11087 5.122239 CCGTCTAATGATTGCTTTCACAGAA 59.878 40.000 0.00 0.00 0.00 3.02
3403 11088 4.631377 CCGTCTAATGATTGCTTTCACAGA 59.369 41.667 0.00 0.00 0.00 3.41
3404 11089 4.393062 ACCGTCTAATGATTGCTTTCACAG 59.607 41.667 0.00 0.00 0.00 3.66
3405 11090 4.323417 ACCGTCTAATGATTGCTTTCACA 58.677 39.130 0.00 0.00 0.00 3.58
3406 11091 4.946784 ACCGTCTAATGATTGCTTTCAC 57.053 40.909 0.00 0.00 0.00 3.18
3407 11092 5.105106 TCCTACCGTCTAATGATTGCTTTCA 60.105 40.000 0.00 0.00 0.00 2.69
3408 11093 5.234543 GTCCTACCGTCTAATGATTGCTTTC 59.765 44.000 0.00 0.00 0.00 2.62
3409 11094 5.116882 GTCCTACCGTCTAATGATTGCTTT 58.883 41.667 0.00 0.00 0.00 3.51
3410 11095 4.161565 TGTCCTACCGTCTAATGATTGCTT 59.838 41.667 0.00 0.00 0.00 3.91
3411 11096 3.704566 TGTCCTACCGTCTAATGATTGCT 59.295 43.478 0.00 0.00 0.00 3.91
3412 11097 4.054780 TGTCCTACCGTCTAATGATTGC 57.945 45.455 0.00 0.00 0.00 3.56
3413 11098 5.601662 ACATGTCCTACCGTCTAATGATTG 58.398 41.667 0.00 0.00 0.00 2.67
3414 11099 5.871396 ACATGTCCTACCGTCTAATGATT 57.129 39.130 0.00 0.00 0.00 2.57
3415 11100 5.507482 CGAACATGTCCTACCGTCTAATGAT 60.507 44.000 0.00 0.00 0.00 2.45
3416 11101 4.201980 CGAACATGTCCTACCGTCTAATGA 60.202 45.833 0.00 0.00 0.00 2.57
3417 11102 4.042398 CGAACATGTCCTACCGTCTAATG 58.958 47.826 0.00 0.00 0.00 1.90
3418 11103 3.698040 ACGAACATGTCCTACCGTCTAAT 59.302 43.478 0.00 0.00 0.00 1.73
3419 11104 3.084039 ACGAACATGTCCTACCGTCTAA 58.916 45.455 0.00 0.00 0.00 2.10
3420 11105 2.715046 ACGAACATGTCCTACCGTCTA 58.285 47.619 0.00 0.00 0.00 2.59
3421 11106 1.542492 ACGAACATGTCCTACCGTCT 58.458 50.000 0.00 0.00 0.00 4.18
3422 11107 2.679837 TCTACGAACATGTCCTACCGTC 59.320 50.000 0.00 0.00 0.00 4.79
3423 11108 2.715046 TCTACGAACATGTCCTACCGT 58.285 47.619 0.00 7.07 0.00 4.83
3424 11109 3.984508 ATCTACGAACATGTCCTACCG 57.015 47.619 0.00 1.01 0.00 4.02
3425 11110 9.924650 ATAAATTATCTACGAACATGTCCTACC 57.075 33.333 0.00 0.00 0.00 3.18
3470 11155 8.792633 TGCAGCTTTACAGTATTCTTAACAATT 58.207 29.630 0.00 0.00 0.00 2.32
3471 11156 8.335532 TGCAGCTTTACAGTATTCTTAACAAT 57.664 30.769 0.00 0.00 0.00 2.71
3472 11157 7.737972 TGCAGCTTTACAGTATTCTTAACAA 57.262 32.000 0.00 0.00 0.00 2.83
3473 11158 7.659799 TCTTGCAGCTTTACAGTATTCTTAACA 59.340 33.333 0.00 0.00 0.00 2.41
3474 11159 8.029642 TCTTGCAGCTTTACAGTATTCTTAAC 57.970 34.615 0.00 0.00 0.00 2.01
3475 11160 8.504005 GTTCTTGCAGCTTTACAGTATTCTTAA 58.496 33.333 0.00 0.00 0.00 1.85
3476 11161 7.659799 TGTTCTTGCAGCTTTACAGTATTCTTA 59.340 33.333 0.00 0.00 0.00 2.10
3477 11162 6.486657 TGTTCTTGCAGCTTTACAGTATTCTT 59.513 34.615 0.00 0.00 0.00 2.52
3478 11163 5.997746 TGTTCTTGCAGCTTTACAGTATTCT 59.002 36.000 0.00 0.00 0.00 2.40
3479 11164 6.241207 TGTTCTTGCAGCTTTACAGTATTC 57.759 37.500 0.00 0.00 0.00 1.75
3480 11165 6.824305 ATGTTCTTGCAGCTTTACAGTATT 57.176 33.333 0.00 0.00 0.00 1.89
3481 11166 6.824305 AATGTTCTTGCAGCTTTACAGTAT 57.176 33.333 0.00 0.00 0.00 2.12
3482 11167 6.633500 AAATGTTCTTGCAGCTTTACAGTA 57.367 33.333 0.00 0.00 0.00 2.74
3483 11168 5.520376 AAATGTTCTTGCAGCTTTACAGT 57.480 34.783 0.00 0.00 0.00 3.55
3484 11169 7.062605 CCATAAAATGTTCTTGCAGCTTTACAG 59.937 37.037 0.00 0.00 0.00 2.74
3485 11170 6.867816 CCATAAAATGTTCTTGCAGCTTTACA 59.132 34.615 0.00 0.00 0.00 2.41
3486 11171 6.868339 ACCATAAAATGTTCTTGCAGCTTTAC 59.132 34.615 0.00 0.00 0.00 2.01
3487 11172 6.991938 ACCATAAAATGTTCTTGCAGCTTTA 58.008 32.000 0.00 0.00 0.00 1.85
3488 11173 5.857268 ACCATAAAATGTTCTTGCAGCTTT 58.143 33.333 0.00 0.00 0.00 3.51
3489 11174 5.473039 GACCATAAAATGTTCTTGCAGCTT 58.527 37.500 0.00 0.00 0.00 3.74
3490 11175 4.082026 GGACCATAAAATGTTCTTGCAGCT 60.082 41.667 0.00 0.00 0.00 4.24
3491 11176 4.082026 AGGACCATAAAATGTTCTTGCAGC 60.082 41.667 0.00 0.00 0.00 5.25
3492 11177 5.649782 AGGACCATAAAATGTTCTTGCAG 57.350 39.130 0.00 0.00 0.00 4.41
3493 11178 6.418057 AAAGGACCATAAAATGTTCTTGCA 57.582 33.333 0.00 0.00 0.00 4.08
3494 11179 9.087424 GATAAAAGGACCATAAAATGTTCTTGC 57.913 33.333 0.00 0.00 0.00 4.01
3495 11180 9.289303 CGATAAAAGGACCATAAAATGTTCTTG 57.711 33.333 0.00 0.00 0.00 3.02
3496 11181 9.020731 ACGATAAAAGGACCATAAAATGTTCTT 57.979 29.630 0.00 0.00 0.00 2.52
3497 11182 8.575649 ACGATAAAAGGACCATAAAATGTTCT 57.424 30.769 0.00 0.00 0.00 3.01
3498 11183 9.634163 AAACGATAAAAGGACCATAAAATGTTC 57.366 29.630 0.00 0.00 0.00 3.18
3499 11184 9.990360 AAAACGATAAAAGGACCATAAAATGTT 57.010 25.926 0.00 0.00 0.00 2.71
3500 11185 9.990360 AAAAACGATAAAAGGACCATAAAATGT 57.010 25.926 0.00 0.00 0.00 2.71
3505 11190 9.465985 GTTTCAAAAACGATAAAAGGACCATAA 57.534 29.630 0.00 0.00 0.00 1.90
3506 11191 8.630917 TGTTTCAAAAACGATAAAAGGACCATA 58.369 29.630 0.00 0.00 0.00 2.74
3507 11192 7.493367 TGTTTCAAAAACGATAAAAGGACCAT 58.507 30.769 0.00 0.00 0.00 3.55
3508 11193 6.864342 TGTTTCAAAAACGATAAAAGGACCA 58.136 32.000 0.00 0.00 0.00 4.02
3509 11194 7.940178 ATGTTTCAAAAACGATAAAAGGACC 57.060 32.000 0.00 0.00 0.00 4.46
3647 11332 9.130661 TGGAAGACAAGATTAAGTTTTCATTGA 57.869 29.630 0.00 0.00 32.34 2.57
3648 11333 9.748708 TTGGAAGACAAGATTAAGTTTTCATTG 57.251 29.630 0.00 0.00 32.34 2.82
3649 11334 9.750125 GTTGGAAGACAAGATTAAGTTTTCATT 57.250 29.630 0.00 0.00 40.38 2.57
3650 11335 8.360390 GGTTGGAAGACAAGATTAAGTTTTCAT 58.640 33.333 0.00 0.00 40.38 2.57
3651 11336 7.201875 GGGTTGGAAGACAAGATTAAGTTTTCA 60.202 37.037 0.00 0.00 40.38 2.69
3652 11337 7.145985 GGGTTGGAAGACAAGATTAAGTTTTC 58.854 38.462 0.00 0.00 40.38 2.29
3653 11338 6.609616 TGGGTTGGAAGACAAGATTAAGTTTT 59.390 34.615 0.00 0.00 40.38 2.43
3654 11339 6.040504 GTGGGTTGGAAGACAAGATTAAGTTT 59.959 38.462 0.00 0.00 40.38 2.66
3655 11340 5.535030 GTGGGTTGGAAGACAAGATTAAGTT 59.465 40.000 0.00 0.00 40.38 2.66
3656 11341 5.070685 GTGGGTTGGAAGACAAGATTAAGT 58.929 41.667 0.00 0.00 40.38 2.24
3657 11342 5.070001 TGTGGGTTGGAAGACAAGATTAAG 58.930 41.667 0.00 0.00 40.38 1.85
3658 11343 5.055265 TGTGGGTTGGAAGACAAGATTAA 57.945 39.130 0.00 0.00 40.38 1.40
3659 11344 4.651778 CTGTGGGTTGGAAGACAAGATTA 58.348 43.478 0.00 0.00 40.38 1.75
3660 11345 3.490348 CTGTGGGTTGGAAGACAAGATT 58.510 45.455 0.00 0.00 40.38 2.40
3661 11346 2.815589 GCTGTGGGTTGGAAGACAAGAT 60.816 50.000 0.00 0.00 40.38 2.40
3662 11347 1.476833 GCTGTGGGTTGGAAGACAAGA 60.477 52.381 0.00 0.00 40.38 3.02
3663 11348 0.954452 GCTGTGGGTTGGAAGACAAG 59.046 55.000 0.00 0.00 40.38 3.16
3664 11349 0.257328 TGCTGTGGGTTGGAAGACAA 59.743 50.000 0.00 0.00 36.54 3.18
3665 11350 0.478072 ATGCTGTGGGTTGGAAGACA 59.522 50.000 0.00 0.00 0.00 3.41
3666 11351 0.883833 CATGCTGTGGGTTGGAAGAC 59.116 55.000 0.00 0.00 0.00 3.01
3667 11352 0.251297 CCATGCTGTGGGTTGGAAGA 60.251 55.000 1.22 0.00 44.79 2.87
3668 11353 2.269978 CCATGCTGTGGGTTGGAAG 58.730 57.895 1.22 0.00 44.79 3.46
3669 11354 4.517663 CCATGCTGTGGGTTGGAA 57.482 55.556 1.22 0.00 44.79 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.