Multiple sequence alignment - TraesCS1B01G422400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G422400 chr1B 100.000 5171 0 0 1 5171 645510135 645515305 0.000000e+00 9550.0
1 TraesCS1B01G422400 chr1B 83.704 540 60 12 126 658 645384276 645384794 7.780000e-133 484.0
2 TraesCS1B01G422400 chr1D 88.984 3041 228 44 1923 4906 467597129 467600119 0.000000e+00 3661.0
3 TraesCS1B01G422400 chr1D 80.565 849 66 45 661 1430 467595871 467596699 3.500000e-156 562.0
4 TraesCS1B01G422400 chr1D 90.458 262 23 2 332 592 467538970 467539230 1.380000e-90 344.0
5 TraesCS1B01G422400 chr1D 89.015 264 26 3 61 322 467538411 467538673 1.800000e-84 324.0
6 TraesCS1B01G422400 chr1A 90.822 2724 163 28 2487 5171 560404968 560402293 0.000000e+00 3565.0
7 TraesCS1B01G422400 chr1A 86.579 760 85 6 1743 2492 560405825 560405073 0.000000e+00 822.0
8 TraesCS1B01G422400 chr1A 90.609 394 16 9 771 1143 560406790 560406397 2.150000e-138 503.0
9 TraesCS1B01G422400 chr1A 84.650 443 45 13 220 658 560443514 560443091 2.230000e-113 420.0
10 TraesCS1B01G422400 chr1A 78.250 400 61 17 991 1377 128523096 128523482 3.110000e-57 233.0
11 TraesCS1B01G422400 chr1A 96.970 33 1 0 573 605 315395324 315395356 7.230000e-04 56.5
12 TraesCS1B01G422400 chr4A 90.122 739 56 7 2487 3214 663341092 663340360 0.000000e+00 944.0
13 TraesCS1B01G422400 chr4A 78.017 464 70 22 991 1436 663341896 663341447 3.970000e-66 263.0
14 TraesCS1B01G422400 chr4A 97.143 35 1 0 571 605 159601073 159601107 5.590000e-05 60.2
15 TraesCS1B01G422400 chr5B 90.082 736 56 7 2487 3211 35355810 35356539 0.000000e+00 939.0
16 TraesCS1B01G422400 chr5B 77.958 431 61 24 991 1403 35355008 35355422 6.690000e-59 239.0
17 TraesCS1B01G422400 chr7B 86.824 425 40 9 2487 2900 672630161 672630580 1.310000e-125 460.0
18 TraesCS1B01G422400 chr7B 78.190 431 60 23 991 1403 672629359 672629773 1.440000e-60 244.0
19 TraesCS1B01G422400 chr7B 78.802 217 44 2 386 601 737760763 737760548 1.500000e-30 145.0
20 TraesCS1B01G422400 chr7B 96.078 51 2 0 2850 2900 672626389 672626439 3.320000e-12 84.2
21 TraesCS1B01G422400 chr3A 78.412 403 59 23 991 1380 160286785 160286398 2.410000e-58 237.0
22 TraesCS1B01G422400 chr3A 94.286 35 2 0 571 605 533075617 533075583 3.000000e-03 54.7
23 TraesCS1B01G422400 chr7A 77.419 403 63 18 991 1380 58320211 58319824 1.130000e-51 215.0
24 TraesCS1B01G422400 chr5A 77.468 395 59 20 1001 1380 507856164 507855785 5.250000e-50 209.0
25 TraesCS1B01G422400 chr5A 96.970 33 1 0 573 605 419571674 419571706 7.230000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G422400 chr1B 645510135 645515305 5170 False 9550.000000 9550 100.000000 1 5171 1 chr1B.!!$F2 5170
1 TraesCS1B01G422400 chr1B 645384276 645384794 518 False 484.000000 484 83.704000 126 658 1 chr1B.!!$F1 532
2 TraesCS1B01G422400 chr1D 467595871 467600119 4248 False 2111.500000 3661 84.774500 661 4906 2 chr1D.!!$F2 4245
3 TraesCS1B01G422400 chr1D 467538411 467539230 819 False 334.000000 344 89.736500 61 592 2 chr1D.!!$F1 531
4 TraesCS1B01G422400 chr1A 560402293 560406790 4497 True 1630.000000 3565 89.336667 771 5171 3 chr1A.!!$R2 4400
5 TraesCS1B01G422400 chr4A 663340360 663341896 1536 True 603.500000 944 84.069500 991 3214 2 chr4A.!!$R1 2223
6 TraesCS1B01G422400 chr5B 35355008 35356539 1531 False 589.000000 939 84.020000 991 3211 2 chr5B.!!$F1 2220
7 TraesCS1B01G422400 chr7B 672626389 672630580 4191 False 262.733333 460 87.030667 991 2900 3 chr7B.!!$F1 1909

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
65 66 0.034089 GGAGCATTACAAGCCCTGGT 60.034 55.0 0.00 0.00 0.00 4.00 F
644 936 0.034283 TGCATGGCAATGTCCTAGCA 60.034 50.0 2.31 8.50 34.76 3.49 F
1330 3353 0.038166 GTGCTGGATTTGGGACCTCA 59.962 55.0 0.00 0.00 0.00 3.86 F
1481 3546 0.109597 CGGCTGTTTCTGCACCATTC 60.110 55.0 0.00 0.00 0.00 2.67 F
1704 3809 0.179073 TCGCTGGGATAAGCTGCTTC 60.179 55.0 19.62 5.39 41.24 3.86 F
3260 5570 0.307760 CAACAAGACCAGCCACGTTC 59.692 55.0 0.00 0.00 0.00 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1459 3494 0.036164 TGGTGCAGAAACAGCCGTAT 59.964 50.0 0.00 0.0 37.24 3.06 R
2245 4398 0.038526 GTGTCCCTGTGTCGGTGTAG 60.039 60.0 0.00 0.0 0.00 2.74 R
3108 5418 0.030638 CGTGTTTTGCACCTGGGAAG 59.969 55.0 0.00 0.0 44.97 3.46 R
3283 5593 0.251073 GGCTGGCCTTGATTTTGCAT 59.749 50.0 3.32 0.0 0.00 3.96 R
3406 5737 0.809385 CAATGGTGCTGAGCTTGGAG 59.191 55.0 5.83 0.0 0.00 3.86 R
4820 7174 0.107459 GTAGGGGCTTCAGGCTTCAG 60.107 60.0 0.00 0.0 41.46 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 7.561021 TGAAATGTTTGTAAGTACAAGCTGA 57.439 32.000 15.98 1.50 45.77 4.26
41 42 8.165239 TGAAATGTTTGTAAGTACAAGCTGAT 57.835 30.769 15.98 3.41 45.77 2.90
42 43 8.075574 TGAAATGTTTGTAAGTACAAGCTGATG 58.924 33.333 15.98 0.00 45.77 3.07
43 44 7.510549 AATGTTTGTAAGTACAAGCTGATGT 57.489 32.000 15.98 0.00 45.77 3.06
45 46 5.176774 TGTTTGTAAGTACAAGCTGATGTCG 59.823 40.000 15.98 0.00 45.77 4.35
47 48 2.386661 AAGTACAAGCTGATGTCGGG 57.613 50.000 0.00 0.00 34.75 5.14
48 49 1.557099 AGTACAAGCTGATGTCGGGA 58.443 50.000 0.00 0.00 34.75 5.14
49 50 1.478510 AGTACAAGCTGATGTCGGGAG 59.521 52.381 0.00 0.00 34.75 4.30
50 51 0.175760 TACAAGCTGATGTCGGGAGC 59.824 55.000 0.00 0.00 34.75 4.70
52 53 0.463295 CAAGCTGATGTCGGGAGCAT 60.463 55.000 0.00 0.00 35.03 3.79
53 54 0.254178 AAGCTGATGTCGGGAGCATT 59.746 50.000 0.00 0.00 35.03 3.56
54 55 1.123077 AGCTGATGTCGGGAGCATTA 58.877 50.000 0.00 0.00 35.03 1.90
55 56 1.202580 AGCTGATGTCGGGAGCATTAC 60.203 52.381 0.00 0.00 35.03 1.89
56 57 1.473257 GCTGATGTCGGGAGCATTACA 60.473 52.381 0.00 0.00 32.70 2.41
57 58 2.905075 CTGATGTCGGGAGCATTACAA 58.095 47.619 0.00 0.00 0.00 2.41
58 59 2.868583 CTGATGTCGGGAGCATTACAAG 59.131 50.000 0.00 0.00 0.00 3.16
59 60 1.599542 GATGTCGGGAGCATTACAAGC 59.400 52.381 0.00 0.00 0.00 4.01
60 61 0.392461 TGTCGGGAGCATTACAAGCC 60.392 55.000 0.00 0.00 0.00 4.35
61 62 1.095807 GTCGGGAGCATTACAAGCCC 61.096 60.000 0.00 0.00 35.40 5.19
62 63 1.224592 CGGGAGCATTACAAGCCCT 59.775 57.895 0.00 0.00 36.62 5.19
63 64 1.097547 CGGGAGCATTACAAGCCCTG 61.098 60.000 0.00 0.00 36.62 4.45
64 65 0.753111 GGGAGCATTACAAGCCCTGG 60.753 60.000 0.00 0.00 35.86 4.45
65 66 0.034089 GGAGCATTACAAGCCCTGGT 60.034 55.000 0.00 0.00 0.00 4.00
66 67 1.098050 GAGCATTACAAGCCCTGGTG 58.902 55.000 0.00 0.00 0.00 4.17
68 69 1.948721 GCATTACAAGCCCTGGTGCC 61.949 60.000 3.90 0.00 0.00 5.01
69 70 1.000359 ATTACAAGCCCTGGTGCCC 60.000 57.895 3.90 0.00 0.00 5.36
91 92 6.127026 GCCCTATATACTTACCAAGGGAGATG 60.127 46.154 9.40 0.00 45.53 2.90
95 96 3.983044 ACTTACCAAGGGAGATGTGTC 57.017 47.619 0.00 0.00 0.00 3.67
109 110 3.813166 AGATGTGTCGTCGGTTGAAAAAT 59.187 39.130 0.00 0.00 0.00 1.82
112 113 2.032426 GTGTCGTCGGTTGAAAAATGGT 59.968 45.455 0.00 0.00 0.00 3.55
113 114 2.683867 TGTCGTCGGTTGAAAAATGGTT 59.316 40.909 0.00 0.00 0.00 3.67
121 123 4.806247 CGGTTGAAAAATGGTTGCAGTTAA 59.194 37.500 0.00 0.00 0.00 2.01
124 126 6.238076 GGTTGAAAAATGGTTGCAGTTAACAG 60.238 38.462 8.61 0.17 32.22 3.16
143 145 4.210331 ACAGCTTGGGCCTAATATTTGAG 58.790 43.478 0.33 0.00 39.73 3.02
245 247 7.154435 AGAACAATCTCACAAATTGGATCTG 57.846 36.000 0.00 0.00 38.23 2.90
254 256 5.048504 TCACAAATTGGATCTGTCTTCTTGC 60.049 40.000 0.00 0.00 0.00 4.01
280 283 8.292448 CGTTATTATGCTGAAATTAAGAGGCAT 58.708 33.333 0.00 0.00 42.05 4.40
281 284 9.971922 GTTATTATGCTGAAATTAAGAGGCATT 57.028 29.630 0.00 0.00 40.26 3.56
322 325 5.535333 TGTCAAGCTTTGTGTACCTAGTAC 58.465 41.667 0.00 0.00 39.24 2.73
326 329 7.328005 GTCAAGCTTTGTGTACCTAGTACTAAC 59.672 40.741 3.76 0.22 39.49 2.34
328 331 6.921914 AGCTTTGTGTACCTAGTACTAACAG 58.078 40.000 3.76 0.00 39.49 3.16
329 332 6.071503 AGCTTTGTGTACCTAGTACTAACAGG 60.072 42.308 8.41 8.41 39.49 4.00
330 333 6.594788 TTTGTGTACCTAGTACTAACAGGG 57.405 41.667 13.59 9.21 39.49 4.45
364 654 4.176271 TGCATGAAGTTGAGTGATACGAG 58.824 43.478 0.00 0.00 0.00 4.18
397 687 5.582689 TCATGAGCGGTATATATCCAGTG 57.417 43.478 0.00 0.00 0.00 3.66
479 769 8.053355 AGAAGGAAAGAAGTGGAAAAGAGTTTA 58.947 33.333 0.00 0.00 0.00 2.01
534 825 2.409378 CCATGCTTGACACGCATTTTTC 59.591 45.455 16.13 0.00 45.18 2.29
601 893 4.036804 GCAACGCACGGGCATTCA 62.037 61.111 11.77 0.00 41.24 2.57
603 895 3.737172 AACGCACGGGCATTCAGC 61.737 61.111 11.77 0.00 41.24 4.26
604 896 4.704833 ACGCACGGGCATTCAGCT 62.705 61.111 11.77 0.00 44.79 4.24
605 897 3.434319 CGCACGGGCATTCAGCTT 61.434 61.111 11.77 0.00 44.79 3.74
606 898 2.180017 GCACGGGCATTCAGCTTG 59.820 61.111 3.77 0.00 44.79 4.01
608 900 2.361610 ACGGGCATTCAGCTTGGG 60.362 61.111 0.00 0.00 44.79 4.12
609 901 3.830192 CGGGCATTCAGCTTGGGC 61.830 66.667 0.00 0.00 44.79 5.36
631 923 2.723746 GCCCGTAGCAATGCATGG 59.276 61.111 8.35 8.35 42.97 3.66
632 924 2.723746 CCCGTAGCAATGCATGGC 59.276 61.111 18.94 18.94 0.00 4.40
633 925 2.120282 CCCGTAGCAATGCATGGCA 61.120 57.895 27.59 11.14 44.86 4.92
634 926 1.665264 CCCGTAGCAATGCATGGCAA 61.665 55.000 27.59 0.00 43.62 4.52
636 928 1.483316 CGTAGCAATGCATGGCAATG 58.517 50.000 27.59 12.40 43.62 2.82
637 929 1.202325 CGTAGCAATGCATGGCAATGT 60.202 47.619 27.59 9.74 43.62 2.71
638 930 2.466846 GTAGCAATGCATGGCAATGTC 58.533 47.619 27.59 9.12 43.62 3.06
639 931 0.177141 AGCAATGCATGGCAATGTCC 59.823 50.000 27.59 0.00 43.62 4.02
641 933 1.409790 GCAATGCATGGCAATGTCCTA 59.590 47.619 21.56 0.00 43.62 2.94
642 934 2.545113 GCAATGCATGGCAATGTCCTAG 60.545 50.000 21.56 0.00 43.62 3.02
643 935 1.325355 ATGCATGGCAATGTCCTAGC 58.675 50.000 0.00 0.00 43.62 3.42
644 936 0.034283 TGCATGGCAATGTCCTAGCA 60.034 50.000 2.31 8.50 34.76 3.49
645 937 1.105457 GCATGGCAATGTCCTAGCAA 58.895 50.000 2.31 0.00 36.08 3.91
646 938 1.684983 GCATGGCAATGTCCTAGCAAT 59.315 47.619 2.31 0.00 36.08 3.56
647 939 2.288030 GCATGGCAATGTCCTAGCAATC 60.288 50.000 2.31 0.00 36.08 2.67
648 940 1.667236 TGGCAATGTCCTAGCAATCG 58.333 50.000 0.00 0.00 0.00 3.34
650 942 1.331756 GGCAATGTCCTAGCAATCGTG 59.668 52.381 0.00 0.00 0.00 4.35
651 943 1.331756 GCAATGTCCTAGCAATCGTGG 59.668 52.381 0.00 0.00 0.00 4.94
652 944 2.905075 CAATGTCCTAGCAATCGTGGA 58.095 47.619 0.00 0.00 0.00 4.02
653 945 3.470709 CAATGTCCTAGCAATCGTGGAT 58.529 45.455 0.00 0.00 0.00 3.41
654 946 2.602257 TGTCCTAGCAATCGTGGATG 57.398 50.000 0.00 0.00 0.00 3.51
655 947 1.221414 GTCCTAGCAATCGTGGATGC 58.779 55.000 0.00 0.00 0.00 3.91
656 948 1.123077 TCCTAGCAATCGTGGATGCT 58.877 50.000 5.53 5.53 40.96 3.79
657 949 1.069204 TCCTAGCAATCGTGGATGCTC 59.931 52.381 3.20 0.00 38.66 4.26
658 950 1.506493 CTAGCAATCGTGGATGCTCC 58.494 55.000 3.20 0.00 38.66 4.70
659 951 1.069823 CTAGCAATCGTGGATGCTCCT 59.930 52.381 3.20 0.00 37.46 3.69
660 952 1.123077 AGCAATCGTGGATGCTCCTA 58.877 50.000 0.00 0.00 37.46 2.94
664 956 1.333177 ATCGTGGATGCTCCTAGGTC 58.667 55.000 9.08 2.70 37.46 3.85
666 958 1.742768 GTGGATGCTCCTAGGTCGG 59.257 63.158 9.08 1.82 37.46 4.79
668 960 2.336809 GATGCTCCTAGGTCGGCG 59.663 66.667 9.08 0.00 0.00 6.46
739 1031 1.459455 TACCGAACCGAACCGAACCA 61.459 55.000 0.00 0.00 0.00 3.67
749 1041 2.033602 CCGAACCACCCCAGAACC 59.966 66.667 0.00 0.00 0.00 3.62
750 1042 2.824880 CCGAACCACCCCAGAACCA 61.825 63.158 0.00 0.00 0.00 3.67
751 1043 1.149627 CGAACCACCCCAGAACCAA 59.850 57.895 0.00 0.00 0.00 3.67
753 1045 1.152546 AACCACCCCAGAACCAAGC 60.153 57.895 0.00 0.00 0.00 4.01
754 1046 2.672996 CCACCCCAGAACCAAGCG 60.673 66.667 0.00 0.00 0.00 4.68
1143 3131 1.675641 GCCAGATCCGTGCCTTGTT 60.676 57.895 0.00 0.00 0.00 2.83
1144 3132 1.648467 GCCAGATCCGTGCCTTGTTC 61.648 60.000 0.00 0.00 0.00 3.18
1145 3133 0.321564 CCAGATCCGTGCCTTGTTCA 60.322 55.000 0.00 0.00 0.00 3.18
1150 3138 0.537143 TCCGTGCCTTGTTCATGCTT 60.537 50.000 0.00 0.00 0.00 3.91
1153 3141 1.135859 CGTGCCTTGTTCATGCTTCTC 60.136 52.381 0.00 0.00 0.00 2.87
1154 3142 1.135859 GTGCCTTGTTCATGCTTCTCG 60.136 52.381 0.00 0.00 0.00 4.04
1157 3145 2.666619 GCCTTGTTCATGCTTCTCGTTG 60.667 50.000 0.00 0.00 0.00 4.10
1164 3157 2.618241 TCATGCTTCTCGTTGTTGCTTT 59.382 40.909 0.00 0.00 0.00 3.51
1165 3158 2.755836 TGCTTCTCGTTGTTGCTTTC 57.244 45.000 0.00 0.00 0.00 2.62
1167 3160 1.663494 CTTCTCGTTGTTGCTTTCGC 58.337 50.000 0.00 0.00 0.00 4.70
1168 3161 0.306533 TTCTCGTTGTTGCTTTCGCC 59.693 50.000 0.00 0.00 34.43 5.54
1173 3166 1.263217 CGTTGTTGCTTTCGCCTAGTT 59.737 47.619 0.00 0.00 34.43 2.24
1175 3168 1.961793 TGTTGCTTTCGCCTAGTTGT 58.038 45.000 0.00 0.00 34.43 3.32
1184 3177 1.912971 GCCTAGTTGTTCCCGGGAT 59.087 57.895 27.48 12.05 0.00 3.85
1186 3179 1.697982 GCCTAGTTGTTCCCGGGATAT 59.302 52.381 27.48 11.24 0.00 1.63
1197 3190 2.960170 GGGATATCGCCGCGTACT 59.040 61.111 13.39 1.70 0.00 2.73
1199 3192 1.285023 GGATATCGCCGCGTACTGT 59.715 57.895 13.39 0.00 0.00 3.55
1228 3225 4.944372 CGGCGGGCTGATACGACC 62.944 72.222 0.00 0.00 33.78 4.79
1237 3235 3.830192 GATACGACCGGTGGCCGT 61.830 66.667 21.49 21.49 46.80 5.68
1239 3237 2.840717 GATACGACCGGTGGCCGTTT 62.841 60.000 22.69 15.94 46.80 3.60
1240 3238 1.603236 ATACGACCGGTGGCCGTTTA 61.603 55.000 22.69 8.45 46.80 2.01
1241 3239 2.485188 TACGACCGGTGGCCGTTTAC 62.485 60.000 22.69 0.00 46.80 2.01
1246 3244 1.740296 CGGTGGCCGTTTACTCTGG 60.740 63.158 0.00 0.00 42.73 3.86
1303 3326 3.050275 GACAGGTGCACGCCTTCC 61.050 66.667 11.45 0.00 36.58 3.46
1330 3353 0.038166 GTGCTGGATTTGGGACCTCA 59.962 55.000 0.00 0.00 0.00 3.86
1388 3419 2.108250 ACTCTAAATTGCACCACCCTGT 59.892 45.455 0.00 0.00 0.00 4.00
1389 3420 2.749621 CTCTAAATTGCACCACCCTGTC 59.250 50.000 0.00 0.00 0.00 3.51
1410 3444 4.294523 CCATCTGGGCGAACGAAA 57.705 55.556 0.00 0.00 0.00 3.46
1430 3465 1.103803 TAGCTTGACGCGGAGATTCT 58.896 50.000 12.47 2.54 45.59 2.40
1431 3466 0.179124 AGCTTGACGCGGAGATTCTC 60.179 55.000 12.47 5.03 45.59 2.87
1436 3471 0.248702 GACGCGGAGATTCTCTGGTC 60.249 60.000 21.28 20.25 37.35 4.02
1437 3472 0.681564 ACGCGGAGATTCTCTGGTCT 60.682 55.000 21.28 0.00 37.35 3.85
1441 3476 3.610585 CGCGGAGATTCTCTGGTCTATTC 60.611 52.174 21.28 4.73 37.35 1.75
1444 3479 3.580895 GGAGATTCTCTGGTCTATTCCCC 59.419 52.174 13.22 0.00 0.00 4.81
1445 3480 3.235200 AGATTCTCTGGTCTATTCCCCG 58.765 50.000 0.00 0.00 0.00 5.73
1446 3481 2.840640 TTCTCTGGTCTATTCCCCGA 57.159 50.000 0.00 0.00 0.00 5.14
1448 3483 0.676736 CTCTGGTCTATTCCCCGAGC 59.323 60.000 0.00 0.00 0.00 5.03
1455 3490 2.666596 CTATTCCCCGAGCCCAGTGC 62.667 65.000 0.00 0.00 41.71 4.40
1464 3499 2.890474 GCCCAGTGCGACATACGG 60.890 66.667 0.00 0.00 42.83 4.02
1465 3500 2.890474 CCCAGTGCGACATACGGC 60.890 66.667 0.00 0.00 42.83 5.68
1467 3502 2.167219 CCAGTGCGACATACGGCTG 61.167 63.158 0.00 0.00 42.83 4.85
1476 3511 1.128692 GACATACGGCTGTTTCTGCAC 59.871 52.381 1.99 0.00 0.00 4.57
1481 3546 0.109597 CGGCTGTTTCTGCACCATTC 60.110 55.000 0.00 0.00 0.00 2.67
1483 3548 0.730494 GCTGTTTCTGCACCATTCGC 60.730 55.000 0.00 0.00 0.00 4.70
1485 3550 2.076100 CTGTTTCTGCACCATTCGCTA 58.924 47.619 0.00 0.00 0.00 4.26
1489 3554 1.221840 CTGCACCATTCGCTAGGGT 59.778 57.895 6.70 0.00 34.59 4.34
1491 3556 3.813596 CACCATTCGCTAGGGTGC 58.186 61.111 6.70 0.00 44.84 5.01
1497 3562 1.635817 ATTCGCTAGGGTGCCATGGT 61.636 55.000 14.67 0.00 0.00 3.55
1503 3568 0.844661 TAGGGTGCCATGGTTCCTGT 60.845 55.000 23.78 15.39 0.00 4.00
1506 3571 1.290009 GTGCCATGGTTCCTGTTGC 59.710 57.895 14.67 0.00 0.00 4.17
1507 3572 1.907807 TGCCATGGTTCCTGTTGCC 60.908 57.895 14.67 0.00 0.00 4.52
1517 3582 2.949644 GTTCCTGTTGCCAACTAACTGT 59.050 45.455 9.30 0.00 0.00 3.55
1521 3586 3.380004 CCTGTTGCCAACTAACTGTTTGA 59.620 43.478 9.30 0.00 36.63 2.69
1523 3588 5.451798 CCTGTTGCCAACTAACTGTTTGAAT 60.452 40.000 9.30 0.00 36.63 2.57
1524 3589 5.971763 TGTTGCCAACTAACTGTTTGAATT 58.028 33.333 9.30 0.00 36.63 2.17
1525 3590 5.809562 TGTTGCCAACTAACTGTTTGAATTG 59.190 36.000 9.30 4.17 36.63 2.32
1528 3593 6.272318 TGCCAACTAACTGTTTGAATTGAAG 58.728 36.000 8.91 0.00 36.63 3.02
1529 3594 6.096141 TGCCAACTAACTGTTTGAATTGAAGA 59.904 34.615 8.91 0.00 36.63 2.87
1530 3595 6.978080 GCCAACTAACTGTTTGAATTGAAGAA 59.022 34.615 8.91 0.00 36.63 2.52
1531 3596 7.491048 GCCAACTAACTGTTTGAATTGAAGAAA 59.509 33.333 8.91 0.00 36.63 2.52
1532 3597 9.364989 CCAACTAACTGTTTGAATTGAAGAAAA 57.635 29.630 8.91 0.00 36.63 2.29
1554 3619 6.579491 AAAAAGTCGTGACACTTACTGTAC 57.421 37.500 10.24 0.00 35.45 2.90
1555 3620 3.911661 AGTCGTGACACTTACTGTACC 57.088 47.619 3.68 0.00 31.03 3.34
1556 3621 3.216800 AGTCGTGACACTTACTGTACCA 58.783 45.455 3.68 0.00 31.03 3.25
1557 3622 3.825014 AGTCGTGACACTTACTGTACCAT 59.175 43.478 3.68 0.00 31.03 3.55
1558 3623 4.280174 AGTCGTGACACTTACTGTACCATT 59.720 41.667 3.68 0.00 31.03 3.16
1559 3624 4.620184 GTCGTGACACTTACTGTACCATTC 59.380 45.833 3.68 0.00 31.03 2.67
1560 3625 4.278919 TCGTGACACTTACTGTACCATTCA 59.721 41.667 3.68 0.00 31.03 2.57
1561 3626 5.047590 TCGTGACACTTACTGTACCATTCAT 60.048 40.000 3.68 0.00 31.03 2.57
1562 3627 5.637810 CGTGACACTTACTGTACCATTCATT 59.362 40.000 3.68 0.00 31.03 2.57
1563 3628 6.183360 CGTGACACTTACTGTACCATTCATTC 60.183 42.308 3.68 0.00 31.03 2.67
1564 3629 6.649141 GTGACACTTACTGTACCATTCATTCA 59.351 38.462 0.00 0.00 31.03 2.57
1579 3644 4.226427 TCATTCATTCTAGGTGCTGCTT 57.774 40.909 0.00 0.00 0.00 3.91
1580 3645 3.943381 TCATTCATTCTAGGTGCTGCTTG 59.057 43.478 0.00 0.00 0.00 4.01
1583 3648 2.089980 CATTCTAGGTGCTGCTTGCTT 58.910 47.619 0.00 0.00 43.37 3.91
1600 3676 2.263945 GCTTCCGCTTCTCTAGTCAAC 58.736 52.381 0.00 0.00 0.00 3.18
1602 3678 0.809385 TCCGCTTCTCTAGTCAACCG 59.191 55.000 0.00 0.00 0.00 4.44
1607 3683 3.673594 CGCTTCTCTAGTCAACCGATTGT 60.674 47.826 0.00 0.00 37.11 2.71
1608 3684 3.614616 GCTTCTCTAGTCAACCGATTGTG 59.385 47.826 0.00 0.00 37.11 3.33
1609 3685 4.810790 CTTCTCTAGTCAACCGATTGTGT 58.189 43.478 0.00 0.00 37.11 3.72
1611 3687 5.306532 TCTCTAGTCAACCGATTGTGTAC 57.693 43.478 0.00 0.00 37.11 2.90
1612 3688 4.763279 TCTCTAGTCAACCGATTGTGTACA 59.237 41.667 0.00 0.00 37.11 2.90
1613 3689 5.242171 TCTCTAGTCAACCGATTGTGTACAA 59.758 40.000 0.00 0.00 40.51 2.41
1615 3691 6.460781 TCTAGTCAACCGATTGTGTACAATT 58.539 36.000 11.20 0.00 45.72 2.32
1616 3692 7.604549 TCTAGTCAACCGATTGTGTACAATTA 58.395 34.615 11.20 0.00 45.72 1.40
1617 3693 6.476243 AGTCAACCGATTGTGTACAATTAC 57.524 37.500 11.20 0.07 45.72 1.89
1619 3695 6.147164 AGTCAACCGATTGTGTACAATTACTG 59.853 38.462 11.20 7.41 45.72 2.74
1621 3697 7.116662 GTCAACCGATTGTGTACAATTACTGTA 59.883 37.037 11.20 0.00 45.72 2.74
1622 3698 7.656542 TCAACCGATTGTGTACAATTACTGTAA 59.343 33.333 11.20 2.26 45.72 2.41
1623 3699 8.447833 CAACCGATTGTGTACAATTACTGTAAT 58.552 33.333 11.20 7.22 45.72 1.89
1625 3701 9.090692 ACCGATTGTGTACAATTACTGTAATAC 57.909 33.333 13.07 8.78 45.72 1.89
1626 3702 9.309516 CCGATTGTGTACAATTACTGTAATACT 57.690 33.333 13.07 4.69 45.72 2.12
1640 3716 6.481643 ACTGTAATACTATGTTTGTGGCCTT 58.518 36.000 3.32 0.00 0.00 4.35
1650 3726 5.446143 TGTTTGTGGCCTTATTACTGTTG 57.554 39.130 3.32 0.00 0.00 3.33
1651 3727 5.133941 TGTTTGTGGCCTTATTACTGTTGA 58.866 37.500 3.32 0.00 0.00 3.18
1652 3728 5.772672 TGTTTGTGGCCTTATTACTGTTGAT 59.227 36.000 3.32 0.00 0.00 2.57
1653 3729 6.943146 TGTTTGTGGCCTTATTACTGTTGATA 59.057 34.615 3.32 0.00 0.00 2.15
1654 3730 6.995511 TTGTGGCCTTATTACTGTTGATAC 57.004 37.500 3.32 0.00 0.00 2.24
1656 3732 5.878116 TGTGGCCTTATTACTGTTGATACAC 59.122 40.000 3.32 0.00 0.00 2.90
1661 3757 6.458342 GCCTTATTACTGTTGATACACTTGCC 60.458 42.308 0.00 0.00 0.00 4.52
1667 3763 1.394917 GTTGATACACTTGCCTCGCTG 59.605 52.381 0.00 0.00 0.00 5.18
1691 3787 0.309922 GATCCAATGCACATCGCTGG 59.690 55.000 0.00 0.00 43.06 4.85
1692 3788 1.105167 ATCCAATGCACATCGCTGGG 61.105 55.000 0.00 0.00 43.06 4.45
1704 3809 0.179073 TCGCTGGGATAAGCTGCTTC 60.179 55.000 19.62 5.39 41.24 3.86
1708 3813 2.486907 GCTGGGATAAGCTGCTTCTGAT 60.487 50.000 19.62 7.03 40.20 2.90
1709 3814 3.401182 CTGGGATAAGCTGCTTCTGATC 58.599 50.000 19.62 15.59 0.00 2.92
1710 3815 2.105477 TGGGATAAGCTGCTTCTGATCC 59.895 50.000 24.76 24.76 41.54 3.36
1713 3825 2.996249 TAAGCTGCTTCTGATCCCTG 57.004 50.000 19.62 0.00 0.00 4.45
1717 3829 2.573462 AGCTGCTTCTGATCCCTGTTAA 59.427 45.455 0.00 0.00 0.00 2.01
1734 3848 7.889589 CCTGTTAATGGGAAAATTTCTTGTC 57.110 36.000 5.65 0.00 0.00 3.18
1735 3849 7.441017 CCTGTTAATGGGAAAATTTCTTGTCA 58.559 34.615 5.65 0.88 0.00 3.58
1736 3850 7.384932 CCTGTTAATGGGAAAATTTCTTGTCAC 59.615 37.037 5.65 0.00 0.00 3.67
1741 3855 5.599732 TGGGAAAATTTCTTGTCACACATG 58.400 37.500 5.65 0.00 26.42 3.21
1755 3898 7.857734 TGTCACACATGGTTACCTTATTATG 57.142 36.000 2.07 0.00 0.00 1.90
1792 3936 8.363390 TGATAGTGGAATAGTAGCTCAAGATTG 58.637 37.037 0.00 0.00 0.00 2.67
1794 3938 6.578023 AGTGGAATAGTAGCTCAAGATTGAC 58.422 40.000 0.00 0.00 32.90 3.18
1804 3948 8.317679 AGTAGCTCAAGATTGACTTATTTGTCT 58.682 33.333 0.00 0.00 37.03 3.41
1828 3973 4.792704 GCTCTGCAACTATGAGAGTAGCTC 60.793 50.000 4.21 0.00 44.21 4.09
1829 3974 3.634448 TCTGCAACTATGAGAGTAGCTCC 59.366 47.826 0.00 0.00 43.26 4.70
1831 3976 3.382865 TGCAACTATGAGAGTAGCTCCAG 59.617 47.826 0.00 0.00 43.26 3.86
1835 3988 5.060427 ACTATGAGAGTAGCTCCAGTGAT 57.940 43.478 0.00 0.00 43.26 3.06
1837 3990 4.935352 ATGAGAGTAGCTCCAGTGATTC 57.065 45.455 0.00 0.00 43.26 2.52
1838 3991 3.974719 TGAGAGTAGCTCCAGTGATTCT 58.025 45.455 0.00 0.00 43.26 2.40
1839 3992 4.348486 TGAGAGTAGCTCCAGTGATTCTT 58.652 43.478 0.00 0.00 43.26 2.52
1840 3993 5.510430 TGAGAGTAGCTCCAGTGATTCTTA 58.490 41.667 0.00 0.00 43.26 2.10
1841 3994 5.358442 TGAGAGTAGCTCCAGTGATTCTTAC 59.642 44.000 0.00 0.00 43.26 2.34
1842 3995 5.265191 AGAGTAGCTCCAGTGATTCTTACA 58.735 41.667 0.00 0.00 0.00 2.41
1843 3996 5.126384 AGAGTAGCTCCAGTGATTCTTACAC 59.874 44.000 0.00 0.00 38.38 2.90
1844 3997 8.762069 GAGAGTAGCTCCAGTGATTCTTACACT 61.762 44.444 0.00 0.00 40.19 3.55
1846 3999 5.590530 AGCTCCAGTGATTCTTACACTAG 57.409 43.478 0.00 0.00 45.15 2.57
1847 4000 4.116238 GCTCCAGTGATTCTTACACTAGC 58.884 47.826 0.00 0.00 45.15 3.42
1851 4004 5.949952 TCCAGTGATTCTTACACTAGCTGTA 59.050 40.000 0.00 0.00 45.15 2.74
1852 4005 6.095580 TCCAGTGATTCTTACACTAGCTGTAG 59.904 42.308 0.00 0.00 45.15 2.74
1853 4006 6.127591 CCAGTGATTCTTACACTAGCTGTAGT 60.128 42.308 0.00 0.00 45.15 2.73
1854 4007 7.316640 CAGTGATTCTTACACTAGCTGTAGTT 58.683 38.462 0.00 0.00 45.15 2.24
1855 4008 7.815068 CAGTGATTCTTACACTAGCTGTAGTTT 59.185 37.037 0.00 0.00 45.15 2.66
1856 4009 8.030106 AGTGATTCTTACACTAGCTGTAGTTTC 58.970 37.037 0.00 0.00 45.10 2.78
1857 4010 7.813148 GTGATTCTTACACTAGCTGTAGTTTCA 59.187 37.037 0.00 0.00 37.40 2.69
1858 4011 8.531982 TGATTCTTACACTAGCTGTAGTTTCAT 58.468 33.333 0.00 0.00 37.40 2.57
1859 4012 8.934507 ATTCTTACACTAGCTGTAGTTTCATC 57.065 34.615 0.00 0.00 37.40 2.92
1860 4013 7.462571 TCTTACACTAGCTGTAGTTTCATCA 57.537 36.000 0.00 0.00 37.40 3.07
1861 4014 7.892609 TCTTACACTAGCTGTAGTTTCATCAA 58.107 34.615 0.00 0.00 37.40 2.57
1887 4040 4.470304 ACCTCTGTTTTCACCCTACCTATC 59.530 45.833 0.00 0.00 0.00 2.08
1893 4046 5.075344 TGTTTTCACCCTACCTATCCCTTTT 59.925 40.000 0.00 0.00 0.00 2.27
1895 4048 7.036425 TGTTTTCACCCTACCTATCCCTTTTAT 60.036 37.037 0.00 0.00 0.00 1.40
1897 4050 8.641498 TTTCACCCTACCTATCCCTTTTATTA 57.359 34.615 0.00 0.00 0.00 0.98
1899 4052 8.214721 TCACCCTACCTATCCCTTTTATTATG 57.785 38.462 0.00 0.00 0.00 1.90
1902 4055 7.965442 ACCCTACCTATCCCTTTTATTATGCTA 59.035 37.037 0.00 0.00 0.00 3.49
1903 4056 8.832735 CCCTACCTATCCCTTTTATTATGCTAA 58.167 37.037 0.00 0.00 0.00 3.09
1923 4076 9.623000 ATGCTAAAATAAAATTCCCGTACTACT 57.377 29.630 0.00 0.00 0.00 2.57
1925 4078 9.712359 GCTAAAATAAAATTCCCGTACTACTTG 57.288 33.333 0.00 0.00 0.00 3.16
1926 4079 9.712359 CTAAAATAAAATTCCCGTACTACTTGC 57.288 33.333 0.00 0.00 0.00 4.01
1928 4081 9.452287 AAAATAAAATTCCCGTACTACTTGCTA 57.548 29.630 0.00 0.00 0.00 3.49
1929 4082 9.452287 AAATAAAATTCCCGTACTACTTGCTAA 57.548 29.630 0.00 0.00 0.00 3.09
1932 4085 6.920569 AATTCCCGTACTACTTGCTAATTG 57.079 37.500 0.00 0.00 0.00 2.32
1950 4103 8.031864 TGCTAATTGTTTTTCTGTTCTTCAACA 58.968 29.630 0.00 0.00 40.40 3.33
1974 4127 2.229784 GCAGGATTTTCAGGACAACAGG 59.770 50.000 0.00 0.00 0.00 4.00
2004 4157 0.589729 CATTGGTTAGCATGCGCGAC 60.590 55.000 12.10 11.91 45.49 5.19
2007 4160 2.703409 GTTAGCATGCGCGACCAG 59.297 61.111 12.10 0.00 45.49 4.00
2040 4193 6.445357 TCCAAAGAAATTATAACGGAAGCC 57.555 37.500 0.00 0.00 0.00 4.35
2151 4304 3.127721 GCTACAAGCTTGAAAGGTCCATC 59.872 47.826 32.50 11.01 38.45 3.51
2243 4396 3.326747 ACGTCAAAGAGGTATGTCTTGC 58.673 45.455 0.00 0.00 36.86 4.01
2245 4398 3.614616 CGTCAAAGAGGTATGTCTTGCTC 59.385 47.826 0.00 0.00 36.86 4.26
2275 4428 3.826157 ACACAGGGACACACAATTATTGG 59.174 43.478 9.88 1.39 34.12 3.16
2310 4463 8.629158 TGCCAAATTATAATATGTCGCTTTCTT 58.371 29.630 0.00 0.00 0.00 2.52
2311 4464 8.905702 GCCAAATTATAATATGTCGCTTTCTTG 58.094 33.333 0.00 0.00 0.00 3.02
2312 4465 9.398170 CCAAATTATAATATGTCGCTTTCTTGG 57.602 33.333 0.00 1.17 0.00 3.61
2315 4468 9.561069 AATTATAATATGTCGCTTTCTTGGAGT 57.439 29.630 0.00 0.00 0.00 3.85
2358 4517 9.922305 GTCTCATCTAGTAAATGCATTAAACAC 57.078 33.333 13.39 8.60 0.00 3.32
2398 4565 5.129634 TGAGCTGTGAAAGTTTCATGGTTA 58.870 37.500 20.72 15.10 42.47 2.85
2412 4580 8.527810 AGTTTCATGGTTAAGTTTTGAGTTTCA 58.472 29.630 0.00 0.00 0.00 2.69
2416 4584 8.352201 TCATGGTTAAGTTTTGAGTTTCATCTG 58.648 33.333 0.00 0.00 0.00 2.90
2422 4590 6.884280 AGTTTTGAGTTTCATCTGGTTAGG 57.116 37.500 0.00 0.00 0.00 2.69
2462 4631 6.986817 TCTGCATTTAATAGAGCTGGACTAAC 59.013 38.462 0.00 0.00 0.00 2.34
2516 4796 8.287350 AGTGAACATAGGTATTCCCTCTAGTTA 58.713 37.037 0.00 0.00 44.81 2.24
2545 4825 5.520632 GCGAGTAGCACATCATCTACTTAA 58.479 41.667 3.78 0.00 43.81 1.85
2569 4849 8.539770 AATCACACACTGATTAGTTACTCTTG 57.460 34.615 0.00 0.00 46.17 3.02
2619 4899 3.204306 TCTCTTAGCATGATTGGCCAG 57.796 47.619 5.11 0.00 0.00 4.85
2694 4983 1.846007 AAGGTTCACAACAGGCAACA 58.154 45.000 0.00 0.00 41.41 3.33
2744 5033 5.105351 GCTTAATCCATGTTTTAGGGCTGTT 60.105 40.000 0.00 0.00 0.00 3.16
2749 5038 6.129414 TCCATGTTTTAGGGCTGTTAGTTA 57.871 37.500 0.00 0.00 0.00 2.24
2757 5046 8.683615 GTTTTAGGGCTGTTAGTTATTGCTAAT 58.316 33.333 0.00 0.00 34.03 1.73
2788 5079 2.425143 ATGGTCATGTTAGGCACCAG 57.575 50.000 7.64 0.00 42.22 4.00
2792 5083 1.555075 GTCATGTTAGGCACCAGAGGA 59.445 52.381 0.00 0.00 0.00 3.71
2879 5189 3.828921 ACCTTACACCCAGTTTTCCTTC 58.171 45.455 0.00 0.00 0.00 3.46
2892 5202 6.715264 CCAGTTTTCCTTCCAGTAACTGTAAT 59.285 38.462 0.00 0.00 42.42 1.89
2910 5220 8.004087 ACTGTAATCCGTTAGCTCTTGTAATA 57.996 34.615 0.00 0.00 0.00 0.98
2911 5221 8.472413 ACTGTAATCCGTTAGCTCTTGTAATAA 58.528 33.333 0.00 0.00 0.00 1.40
2912 5222 9.477484 CTGTAATCCGTTAGCTCTTGTAATAAT 57.523 33.333 0.00 0.00 0.00 1.28
2936 5246 5.409520 TGTTCTTCAGTGCATAACTCATGAC 59.590 40.000 0.00 0.00 36.83 3.06
2937 5247 5.151297 TCTTCAGTGCATAACTCATGACA 57.849 39.130 0.00 0.00 36.83 3.58
2995 5305 3.517100 AGTTCTGCAGGATAAGCAAGAGA 59.483 43.478 15.13 0.00 42.17 3.10
3039 5349 9.187455 GAGCTAGCTAAACTTCAGATTGTATAC 57.813 37.037 19.38 0.00 0.00 1.47
3084 5394 2.110011 AGGTACTGCCCCATCAGTTTTT 59.890 45.455 1.55 0.00 44.26 1.94
3092 5402 2.836981 CCCCATCAGTTTTTATGGCCAA 59.163 45.455 10.96 0.00 41.19 4.52
3108 5418 2.304751 CCAAGGAAAATGATGGCAGC 57.695 50.000 0.00 0.00 0.00 5.25
3161 5471 0.456653 CCGCTGCACCAAGTAAATGC 60.457 55.000 0.00 0.00 39.88 3.56
3192 5502 2.428171 TCCTGCTATGCAATTCCAAAGC 59.572 45.455 0.00 0.00 38.41 3.51
3216 5526 3.004106 GCAATGGGCTTATTCTACAGCAG 59.996 47.826 0.00 0.00 40.25 4.24
3234 5544 1.406539 CAGCTTGTGCCTGTGTCTTTT 59.593 47.619 0.00 0.00 40.80 2.27
3239 5549 2.649190 TGTGCCTGTGTCTTTTAGCAA 58.351 42.857 0.00 0.00 31.03 3.91
3254 5564 1.109323 AGCAACCAACAAGACCAGCC 61.109 55.000 0.00 0.00 0.00 4.85
3257 5567 1.101049 AACCAACAAGACCAGCCACG 61.101 55.000 0.00 0.00 0.00 4.94
3258 5568 1.525995 CCAACAAGACCAGCCACGT 60.526 57.895 0.00 0.00 0.00 4.49
3260 5570 0.307760 CAACAAGACCAGCCACGTTC 59.692 55.000 0.00 0.00 0.00 3.95
3267 5577 1.890041 CCAGCCACGTTCGAACCAA 60.890 57.895 22.07 0.00 0.00 3.67
3268 5578 1.278637 CAGCCACGTTCGAACCAAC 59.721 57.895 22.07 9.57 0.00 3.77
3280 5590 4.942761 TCGAACCAACCTACTGTTTACT 57.057 40.909 0.00 0.00 34.00 2.24
3282 5592 4.099881 TCGAACCAACCTACTGTTTACTGT 59.900 41.667 0.00 0.00 34.00 3.55
3283 5593 5.301551 TCGAACCAACCTACTGTTTACTGTA 59.698 40.000 0.00 0.68 34.00 2.74
3284 5594 6.015180 TCGAACCAACCTACTGTTTACTGTAT 60.015 38.462 0.93 0.00 34.00 2.29
3295 5605 9.546909 CTACTGTTTACTGTATGCAAAATCAAG 57.453 33.333 0.00 0.00 31.43 3.02
3300 5610 3.194116 ACTGTATGCAAAATCAAGGCCAG 59.806 43.478 5.01 0.00 0.00 4.85
3339 5649 2.102925 CCAAACATTTCAACCTGCACCT 59.897 45.455 0.00 0.00 0.00 4.00
3342 5652 2.880443 ACATTTCAACCTGCACCTCAT 58.120 42.857 0.00 0.00 0.00 2.90
3406 5737 1.267121 TGAGGCACCAGAGTTCTACC 58.733 55.000 0.00 0.00 0.00 3.18
3486 5817 2.868044 GCAACCACAACAACAACCACAA 60.868 45.455 0.00 0.00 0.00 3.33
3487 5818 2.734079 CAACCACAACAACAACCACAAC 59.266 45.455 0.00 0.00 0.00 3.32
3488 5819 1.273886 ACCACAACAACAACCACAACC 59.726 47.619 0.00 0.00 0.00 3.77
3489 5820 1.273606 CCACAACAACAACCACAACCA 59.726 47.619 0.00 0.00 0.00 3.67
3490 5821 2.333014 CACAACAACAACCACAACCAC 58.667 47.619 0.00 0.00 0.00 4.16
3491 5822 1.964223 ACAACAACAACCACAACCACA 59.036 42.857 0.00 0.00 0.00 4.17
3492 5823 2.365617 ACAACAACAACCACAACCACAA 59.634 40.909 0.00 0.00 0.00 3.33
3540 5871 1.338973 CACAACATGCAGCAAGTTCCT 59.661 47.619 13.07 0.00 0.00 3.36
3570 5901 4.574599 AGTTCAACTGCAAACATCTTCC 57.425 40.909 0.00 0.00 0.00 3.46
3693 6024 1.134401 GTGCAGCCTGCCTATTCTACA 60.134 52.381 15.29 0.00 44.23 2.74
3732 6063 1.676635 GCACCATGAAGCTGCTCCA 60.677 57.895 1.00 0.00 0.00 3.86
3774 6105 2.408271 TTGCTGTTCCTATGGCAGAG 57.592 50.000 1.19 1.19 36.06 3.35
3810 6141 1.228245 GCAGACCCAGCAGTTCCAA 60.228 57.895 0.00 0.00 0.00 3.53
3855 6186 0.389426 CTCAGCAATGCAAGGTTGGC 60.389 55.000 8.35 0.00 0.00 4.52
3864 6195 0.033109 GCAAGGTTGGCCCCTATTCT 60.033 55.000 0.00 0.00 33.33 2.40
4002 6333 0.268869 ATCATCTAGGACCCCAGCCA 59.731 55.000 0.00 0.00 0.00 4.75
4017 6348 2.401766 GCCAGTGCAGAATCACCCG 61.402 63.158 0.00 0.00 37.68 5.28
4068 6399 2.354821 GGGTTACTTGAACGATCATGCC 59.645 50.000 8.25 2.76 39.12 4.40
4120 6451 0.179145 CCAGCCCGTAGAGTACAACG 60.179 60.000 8.06 8.06 38.80 4.10
4158 6489 3.672255 CTCTGTTGGCAATGCGGCG 62.672 63.158 1.92 0.51 45.16 6.46
4177 6508 2.044555 TGGTCTGGCTAGTCGACGG 61.045 63.158 10.46 8.51 0.00 4.79
4196 6527 0.745845 GTGGAGAAGCCGCATGTGAT 60.746 55.000 8.11 0.00 46.72 3.06
4222 6553 2.497675 TCTATCTGCTCCTGCGACTTTT 59.502 45.455 0.00 0.00 43.34 2.27
4223 6554 1.731720 ATCTGCTCCTGCGACTTTTC 58.268 50.000 0.00 0.00 43.34 2.29
4231 6562 0.232303 CTGCGACTTTTCCGTGTGAC 59.768 55.000 0.00 0.00 0.00 3.67
4236 6567 2.090041 CGACTTTTCCGTGTGACATACG 59.910 50.000 16.84 16.84 40.98 3.06
4250 6581 0.930310 CATACGGTGTGGCGATCTTG 59.070 55.000 0.00 0.00 0.00 3.02
4255 6586 0.517316 GGTGTGGCGATCTTGTTGTC 59.483 55.000 0.00 0.00 0.00 3.18
4283 6614 0.801251 CTCGCTTTTGAGCTTCCCTG 59.199 55.000 0.00 0.00 0.00 4.45
4379 6713 7.933033 TGGATGATGATCGTGATGAAATAAGAA 59.067 33.333 0.00 0.00 0.00 2.52
4382 6716 7.578852 TGATGATCGTGATGAAATAAGAATGC 58.421 34.615 0.00 0.00 0.00 3.56
4383 6717 7.443272 TGATGATCGTGATGAAATAAGAATGCT 59.557 33.333 0.00 0.00 0.00 3.79
4384 6718 8.837788 ATGATCGTGATGAAATAAGAATGCTA 57.162 30.769 0.00 0.00 0.00 3.49
4386 6720 7.386025 TGATCGTGATGAAATAAGAATGCTAGG 59.614 37.037 0.00 0.00 0.00 3.02
4388 6722 7.047891 TCGTGATGAAATAAGAATGCTAGGTT 58.952 34.615 0.00 0.00 0.00 3.50
4389 6723 8.201464 TCGTGATGAAATAAGAATGCTAGGTTA 58.799 33.333 0.00 0.00 0.00 2.85
4390 6724 8.491152 CGTGATGAAATAAGAATGCTAGGTTAG 58.509 37.037 0.00 0.00 0.00 2.34
4391 6725 9.331282 GTGATGAAATAAGAATGCTAGGTTAGT 57.669 33.333 0.00 0.00 0.00 2.24
4392 6726 9.547753 TGATGAAATAAGAATGCTAGGTTAGTC 57.452 33.333 0.00 0.00 0.00 2.59
4393 6727 9.771534 GATGAAATAAGAATGCTAGGTTAGTCT 57.228 33.333 0.00 0.00 0.00 3.24
4594 6930 1.283487 GCCGGGTTTGTGTTTACCG 59.717 57.895 2.18 0.00 43.89 4.02
4597 6933 0.587768 CGGGTTTGTGTTTACCGTCC 59.412 55.000 0.00 0.00 39.70 4.79
4609 6945 0.896923 TACCGTCCGTTGGCAGTAAT 59.103 50.000 0.00 0.00 0.00 1.89
4614 6950 2.412325 CGTCCGTTGGCAGTAATTGTTC 60.412 50.000 0.00 0.00 0.00 3.18
4659 6997 0.038251 GGTTTGGCTGTGGCTTAAGC 60.038 55.000 19.53 19.53 38.73 3.09
4697 7035 4.003648 GGGAAGTAACTGTGGACAAGATG 58.996 47.826 0.00 0.00 0.00 2.90
4703 7041 7.124573 AGTAACTGTGGACAAGATGCATATA 57.875 36.000 0.00 0.00 0.00 0.86
4708 7046 6.484643 ACTGTGGACAAGATGCATATACATTC 59.515 38.462 0.00 0.00 0.00 2.67
4711 7049 5.471116 TGGACAAGATGCATATACATTCTGC 59.529 40.000 0.00 0.00 36.45 4.26
4719 7057 4.202000 TGCATATACATTCTGCCAAAACCG 60.202 41.667 0.00 0.00 35.02 4.44
4749 7092 7.639945 GTCATAAGACAAAAAGTTGCTACTGT 58.360 34.615 0.36 0.00 44.34 3.55
4764 7107 4.246458 GCTACTGTACTGAACTGAAAGGG 58.754 47.826 6.77 0.00 39.30 3.95
4788 7131 5.799827 ATACTCATTCTGGAGAACTAGGC 57.200 43.478 0.00 0.00 38.30 3.93
4795 7138 0.615331 TGGAGAACTAGGCCTGCTTG 59.385 55.000 17.99 5.39 0.00 4.01
4805 7159 0.461339 GGCCTGCTTGCATTCCAATG 60.461 55.000 0.00 0.00 39.40 2.82
4818 7172 2.416680 TCCAATGAATGACGATGCCA 57.583 45.000 0.00 0.00 0.00 4.92
4819 7173 2.016318 TCCAATGAATGACGATGCCAC 58.984 47.619 0.00 0.00 0.00 5.01
4820 7174 1.066002 CCAATGAATGACGATGCCACC 59.934 52.381 0.00 0.00 0.00 4.61
4821 7175 2.019249 CAATGAATGACGATGCCACCT 58.981 47.619 0.00 0.00 0.00 4.00
4822 7176 1.671979 ATGAATGACGATGCCACCTG 58.328 50.000 0.00 0.00 0.00 4.00
4823 7177 0.612744 TGAATGACGATGCCACCTGA 59.387 50.000 0.00 0.00 0.00 3.86
4824 7178 1.003003 TGAATGACGATGCCACCTGAA 59.997 47.619 0.00 0.00 0.00 3.02
4855 7209 3.393800 CCCTACTGATGGCAAATACTCG 58.606 50.000 0.00 0.00 0.00 4.18
4909 7264 5.598005 TCCAGAAATTGTTCATGTCAAAGGT 59.402 36.000 9.29 0.78 36.09 3.50
4945 7300 1.125093 TCCAGGCAGAGGACGGAAAA 61.125 55.000 0.00 0.00 0.00 2.29
4946 7301 0.250727 CCAGGCAGAGGACGGAAAAA 60.251 55.000 0.00 0.00 0.00 1.94
4948 7303 0.765510 AGGCAGAGGACGGAAAAAGT 59.234 50.000 0.00 0.00 0.00 2.66
4971 7326 4.447290 TGTTCATTTCTCGAGTCCAAACA 58.553 39.130 13.13 13.98 0.00 2.83
4990 7345 7.039363 TCCAAACACCTAACCAATTTAAGATGG 60.039 37.037 6.98 6.98 42.60 3.51
5002 7357 6.153340 CCAATTTAAGATGGTCCATTGTCTGT 59.847 38.462 5.65 0.00 31.84 3.41
5028 7385 7.867921 TCCCATAATAACAGTCAGGTTAACAT 58.132 34.615 8.10 0.00 36.86 2.71
5035 7392 4.973168 ACAGTCAGGTTAACATGTGACAT 58.027 39.130 25.03 15.79 41.52 3.06
5042 7399 7.601130 GTCAGGTTAACATGTGACATTGTACTA 59.399 37.037 18.86 0.00 39.33 1.82
5046 7403 8.227791 GGTTAACATGTGACATTGTACTAACTG 58.772 37.037 8.10 0.00 0.00 3.16
5047 7404 8.984764 GTTAACATGTGACATTGTACTAACTGA 58.015 33.333 0.00 0.00 0.00 3.41
5048 7405 7.421530 AACATGTGACATTGTACTAACTGAC 57.578 36.000 0.00 0.00 0.00 3.51
5049 7406 6.521162 ACATGTGACATTGTACTAACTGACA 58.479 36.000 0.00 0.00 0.00 3.58
5050 7407 6.646653 ACATGTGACATTGTACTAACTGACAG 59.353 38.462 0.00 0.00 0.00 3.51
5059 7416 4.277672 TGTACTAACTGACAGTCTGACACC 59.722 45.833 8.93 0.00 0.00 4.16
5104 7461 3.065925 GCAACAGCCATAAATCCAGAGAC 59.934 47.826 0.00 0.00 0.00 3.36
5129 7486 8.739972 ACCAACCACAGAATGAATATTAAACTC 58.260 33.333 0.00 0.00 39.69 3.01
5162 7522 4.504858 CATACACAACCCAGGTCTAGAAC 58.495 47.826 0.00 0.00 0.00 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 8.865001 GCTTGTACTTACAAACATTTCAAACAA 58.135 29.630 3.52 0.00 44.67 2.83
13 14 8.531530 CAGCTTGTACTTACAAACATTTCAAAC 58.468 33.333 3.52 0.00 44.67 2.93
14 15 8.462811 TCAGCTTGTACTTACAAACATTTCAAA 58.537 29.630 3.52 0.00 44.67 2.69
15 16 7.990917 TCAGCTTGTACTTACAAACATTTCAA 58.009 30.769 3.52 0.00 44.67 2.69
16 17 7.561021 TCAGCTTGTACTTACAAACATTTCA 57.439 32.000 3.52 0.00 44.67 2.69
17 18 8.076178 ACATCAGCTTGTACTTACAAACATTTC 58.924 33.333 3.52 0.00 44.67 2.17
18 19 7.940850 ACATCAGCTTGTACTTACAAACATTT 58.059 30.769 3.52 0.00 44.67 2.32
19 20 7.510549 ACATCAGCTTGTACTTACAAACATT 57.489 32.000 3.52 0.00 44.67 2.71
21 22 5.176774 CGACATCAGCTTGTACTTACAAACA 59.823 40.000 3.52 0.00 44.67 2.83
22 23 5.389516 CCGACATCAGCTTGTACTTACAAAC 60.390 44.000 3.52 0.00 44.67 2.93
26 27 3.119245 TCCCGACATCAGCTTGTACTTAC 60.119 47.826 0.00 0.00 0.00 2.34
27 28 3.093814 TCCCGACATCAGCTTGTACTTA 58.906 45.455 0.00 0.00 0.00 2.24
28 29 1.899814 TCCCGACATCAGCTTGTACTT 59.100 47.619 0.00 0.00 0.00 2.24
29 30 1.478510 CTCCCGACATCAGCTTGTACT 59.521 52.381 0.00 0.00 0.00 2.73
30 31 1.927895 CTCCCGACATCAGCTTGTAC 58.072 55.000 0.00 0.00 0.00 2.90
31 32 0.175760 GCTCCCGACATCAGCTTGTA 59.824 55.000 0.00 0.00 0.00 2.41
33 34 0.463295 ATGCTCCCGACATCAGCTTG 60.463 55.000 0.00 0.00 34.03 4.01
34 35 0.254178 AATGCTCCCGACATCAGCTT 59.746 50.000 0.00 0.00 34.03 3.74
36 37 1.221414 GTAATGCTCCCGACATCAGC 58.779 55.000 0.00 0.00 0.00 4.26
40 41 1.668419 GCTTGTAATGCTCCCGACAT 58.332 50.000 0.00 0.00 33.64 3.06
41 42 0.392461 GGCTTGTAATGCTCCCGACA 60.392 55.000 0.00 0.00 37.15 4.35
42 43 1.095807 GGGCTTGTAATGCTCCCGAC 61.096 60.000 0.00 0.00 37.15 4.79
43 44 1.223487 GGGCTTGTAATGCTCCCGA 59.777 57.895 0.00 0.00 37.15 5.14
45 46 0.753111 CCAGGGCTTGTAATGCTCCC 60.753 60.000 0.00 0.00 38.44 4.30
47 48 1.098050 CACCAGGGCTTGTAATGCTC 58.902 55.000 0.00 0.00 37.84 4.26
48 49 0.967380 GCACCAGGGCTTGTAATGCT 60.967 55.000 9.52 0.00 37.15 3.79
49 50 1.512694 GCACCAGGGCTTGTAATGC 59.487 57.895 0.00 0.00 36.06 3.56
50 51 2.192605 GGCACCAGGGCTTGTAATG 58.807 57.895 0.00 0.00 39.42 1.90
64 65 4.842380 TCCCTTGGTAAGTATATAGGGCAC 59.158 45.833 0.00 0.00 41.70 5.01
65 66 5.091552 CTCCCTTGGTAAGTATATAGGGCA 58.908 45.833 0.00 0.00 41.70 5.36
66 67 5.339477 TCTCCCTTGGTAAGTATATAGGGC 58.661 45.833 0.00 0.00 41.70 5.19
68 69 7.455008 ACACATCTCCCTTGGTAAGTATATAGG 59.545 40.741 0.00 0.00 0.00 2.57
69 70 8.423906 ACACATCTCCCTTGGTAAGTATATAG 57.576 38.462 0.00 0.00 0.00 1.31
91 92 2.032426 ACCATTTTTCAACCGACGACAC 59.968 45.455 0.00 0.00 0.00 3.67
95 96 1.784283 GCAACCATTTTTCAACCGACG 59.216 47.619 0.00 0.00 0.00 5.12
109 110 1.680735 CCAAGCTGTTAACTGCAACCA 59.319 47.619 31.16 0.29 42.33 3.67
112 113 0.673437 GCCCAAGCTGTTAACTGCAA 59.327 50.000 31.16 1.98 42.33 4.08
113 114 1.178534 GGCCCAAGCTGTTAACTGCA 61.179 55.000 31.16 2.41 42.33 4.41
121 123 4.079787 TCTCAAATATTAGGCCCAAGCTGT 60.080 41.667 0.00 0.00 39.73 4.40
124 126 5.072741 TCATCTCAAATATTAGGCCCAAGC 58.927 41.667 0.00 0.00 38.76 4.01
181 183 4.437390 CGTTCCATTCTCCATAGCAACAAC 60.437 45.833 0.00 0.00 0.00 3.32
245 247 5.718649 TCAGCATAATAACGCAAGAAGAC 57.281 39.130 0.00 0.00 43.62 3.01
254 256 7.639039 TGCCTCTTAATTTCAGCATAATAACG 58.361 34.615 0.00 0.00 0.00 3.18
294 297 4.705023 AGGTACACAAAGCTTGACAGTTTT 59.295 37.500 0.00 0.00 33.97 2.43
295 298 4.270008 AGGTACACAAAGCTTGACAGTTT 58.730 39.130 0.00 0.00 0.00 2.66
322 325 2.715749 TCCATGCATGTCCCTGTTAG 57.284 50.000 24.58 6.69 0.00 2.34
397 687 3.361724 CGCTCGCCGTCAAATAACTTATC 60.362 47.826 0.00 0.00 0.00 1.75
614 906 2.723746 CCATGCATTGCTACGGGC 59.276 61.111 10.49 0.00 42.22 6.13
615 907 1.665264 TTGCCATGCATTGCTACGGG 61.665 55.000 21.95 8.33 38.76 5.28
616 908 0.386476 ATTGCCATGCATTGCTACGG 59.614 50.000 21.95 9.04 38.76 4.02
617 909 1.202325 ACATTGCCATGCATTGCTACG 60.202 47.619 21.95 11.05 41.68 3.51
618 910 2.466846 GACATTGCCATGCATTGCTAC 58.533 47.619 21.95 6.83 41.68 3.58
619 911 1.409790 GGACATTGCCATGCATTGCTA 59.590 47.619 21.95 15.81 41.68 3.49
620 912 0.177141 GGACATTGCCATGCATTGCT 59.823 50.000 21.95 3.22 41.68 3.91
621 913 0.177141 AGGACATTGCCATGCATTGC 59.823 50.000 15.57 15.57 41.68 3.56
622 914 2.545113 GCTAGGACATTGCCATGCATTG 60.545 50.000 0.00 8.85 43.00 2.82
623 915 1.684983 GCTAGGACATTGCCATGCATT 59.315 47.619 0.00 0.00 38.76 3.56
624 916 1.325355 GCTAGGACATTGCCATGCAT 58.675 50.000 0.00 0.00 38.76 3.96
627 919 2.031420 CGATTGCTAGGACATTGCCATG 60.031 50.000 0.00 0.00 36.34 3.66
628 920 2.224606 CGATTGCTAGGACATTGCCAT 58.775 47.619 0.00 0.00 0.00 4.40
629 921 1.065491 ACGATTGCTAGGACATTGCCA 60.065 47.619 0.00 0.00 0.00 4.92
630 922 1.331756 CACGATTGCTAGGACATTGCC 59.668 52.381 0.00 0.00 0.00 4.52
631 923 1.331756 CCACGATTGCTAGGACATTGC 59.668 52.381 0.00 0.00 0.00 3.56
632 924 2.905075 TCCACGATTGCTAGGACATTG 58.095 47.619 0.00 0.00 0.00 2.82
633 925 3.470709 CATCCACGATTGCTAGGACATT 58.529 45.455 0.00 0.00 32.04 2.71
634 926 2.808202 GCATCCACGATTGCTAGGACAT 60.808 50.000 0.00 0.00 32.04 3.06
636 928 1.202580 AGCATCCACGATTGCTAGGAC 60.203 52.381 0.00 0.00 35.68 3.85
637 929 1.069204 GAGCATCCACGATTGCTAGGA 59.931 52.381 0.00 0.00 37.79 2.94
638 930 1.506493 GAGCATCCACGATTGCTAGG 58.494 55.000 0.00 0.00 37.79 3.02
651 943 2.336809 CGCCGACCTAGGAGCATC 59.663 66.667 17.98 0.71 0.00 3.91
652 944 2.442272 ACGCCGACCTAGGAGCAT 60.442 61.111 17.98 0.23 34.23 3.79
653 945 3.138798 GACGCCGACCTAGGAGCA 61.139 66.667 17.98 0.00 34.23 4.26
654 946 2.829458 AGACGCCGACCTAGGAGC 60.829 66.667 17.98 14.05 34.23 4.70
655 947 0.820074 ATCAGACGCCGACCTAGGAG 60.820 60.000 17.98 8.95 37.11 3.69
656 948 0.395311 AATCAGACGCCGACCTAGGA 60.395 55.000 17.98 0.00 0.00 2.94
657 949 0.460311 AAATCAGACGCCGACCTAGG 59.540 55.000 7.41 7.41 0.00 3.02
658 950 1.927174 CAAAATCAGACGCCGACCTAG 59.073 52.381 0.00 0.00 0.00 3.02
659 951 1.546923 TCAAAATCAGACGCCGACCTA 59.453 47.619 0.00 0.00 0.00 3.08
660 952 0.320374 TCAAAATCAGACGCCGACCT 59.680 50.000 0.00 0.00 0.00 3.85
664 956 1.419922 CGGTCAAAATCAGACGCCG 59.580 57.895 0.00 0.00 36.87 6.46
666 958 0.721718 CTCCGGTCAAAATCAGACGC 59.278 55.000 0.00 0.00 36.87 5.19
668 960 1.993370 CGTCTCCGGTCAAAATCAGAC 59.007 52.381 0.00 3.25 35.29 3.51
719 1011 1.008875 GGTTCGGTTCGGTTCGGTAC 61.009 60.000 0.00 0.00 0.00 3.34
720 1012 1.288752 GGTTCGGTTCGGTTCGGTA 59.711 57.895 0.00 0.00 0.00 4.02
725 1017 2.111669 GGGTGGTTCGGTTCGGTT 59.888 61.111 0.00 0.00 0.00 4.44
726 1018 3.944945 GGGGTGGTTCGGTTCGGT 61.945 66.667 0.00 0.00 0.00 4.69
730 1022 1.149854 GTTCTGGGGTGGTTCGGTT 59.850 57.895 0.00 0.00 0.00 4.44
739 1031 3.175710 ACCGCTTGGTTCTGGGGT 61.176 61.111 0.00 0.00 46.51 4.95
761 1053 3.277211 GATATAGGCGGCGCGGTCA 62.277 63.158 26.95 11.61 0.00 4.02
766 1058 1.141234 GGGTAGATATAGGCGGCGC 59.859 63.158 26.17 26.17 0.00 6.53
767 1059 1.432251 CGGGTAGATATAGGCGGCG 59.568 63.158 0.51 0.51 0.00 6.46
768 1060 1.141234 GCGGGTAGATATAGGCGGC 59.859 63.158 0.00 0.00 0.00 6.53
831 1126 0.736325 CTAGGTCGGCGACTTGGTTG 60.736 60.000 35.42 17.92 32.47 3.77
964 1287 3.592814 CCGCGTATCTCCGGCTGA 61.593 66.667 4.92 0.00 37.85 4.26
1143 3131 1.882912 AGCAACAACGAGAAGCATGA 58.117 45.000 0.00 0.00 0.00 3.07
1144 3132 2.693797 AAGCAACAACGAGAAGCATG 57.306 45.000 0.00 0.00 0.00 4.06
1145 3133 2.349817 CGAAAGCAACAACGAGAAGCAT 60.350 45.455 0.00 0.00 0.00 3.79
1164 3157 2.652095 CCCGGGAACAACTAGGCGA 61.652 63.158 18.48 0.00 0.00 5.54
1165 3158 1.968050 ATCCCGGGAACAACTAGGCG 61.968 60.000 30.84 0.00 0.00 5.52
1167 3160 2.029290 CGATATCCCGGGAACAACTAGG 60.029 54.545 30.84 7.36 0.00 3.02
1168 3161 2.609737 GCGATATCCCGGGAACAACTAG 60.610 54.545 30.84 15.96 0.00 2.57
1173 3166 2.863346 CGGCGATATCCCGGGAACA 61.863 63.158 30.84 19.50 41.99 3.18
1175 3168 3.998672 GCGGCGATATCCCGGGAA 61.999 66.667 30.84 17.56 45.66 3.97
1184 3177 1.226463 CACACAGTACGCGGCGATA 60.226 57.895 30.94 14.49 0.00 2.92
1217 3214 2.585247 GCCACCGGTCGTATCAGC 60.585 66.667 2.59 0.00 0.00 4.26
1330 3353 4.362677 TCCTAGAGGTAGAAATGGCAAGT 58.637 43.478 0.00 0.00 36.34 3.16
1373 3404 0.889186 GTCGACAGGGTGGTGCAATT 60.889 55.000 11.55 0.00 0.00 2.32
1403 3437 1.266891 CCGCGTCAAGCTATTTCGTTC 60.267 52.381 4.92 0.00 45.59 3.95
1406 3440 0.572590 CTCCGCGTCAAGCTATTTCG 59.427 55.000 4.92 0.00 45.59 3.46
1409 3443 2.101582 AGAATCTCCGCGTCAAGCTATT 59.898 45.455 4.92 0.00 45.59 1.73
1410 3444 1.683917 AGAATCTCCGCGTCAAGCTAT 59.316 47.619 4.92 0.00 45.59 2.97
1430 3465 0.759436 GGCTCGGGGAATAGACCAGA 60.759 60.000 0.00 0.00 0.00 3.86
1431 3466 1.749033 GGCTCGGGGAATAGACCAG 59.251 63.158 0.00 0.00 0.00 4.00
1436 3471 1.447643 CACTGGGCTCGGGGAATAG 59.552 63.158 0.00 0.00 0.00 1.73
1437 3472 2.742116 GCACTGGGCTCGGGGAATA 61.742 63.158 0.00 0.00 40.25 1.75
1444 3479 1.878522 GTATGTCGCACTGGGCTCG 60.879 63.158 0.00 0.00 41.67 5.03
1445 3480 1.878522 CGTATGTCGCACTGGGCTC 60.879 63.158 0.00 0.00 41.67 4.70
1446 3481 2.184322 CGTATGTCGCACTGGGCT 59.816 61.111 0.00 0.00 41.67 5.19
1448 3483 2.890474 GCCGTATGTCGCACTGGG 60.890 66.667 0.00 0.00 38.35 4.45
1455 3490 0.370273 GCAGAAACAGCCGTATGTCG 59.630 55.000 0.00 0.00 39.52 4.35
1458 3493 0.447801 GGTGCAGAAACAGCCGTATG 59.552 55.000 0.00 0.00 31.85 2.39
1459 3494 0.036164 TGGTGCAGAAACAGCCGTAT 59.964 50.000 0.00 0.00 37.24 3.06
1464 3499 0.730494 GCGAATGGTGCAGAAACAGC 60.730 55.000 0.00 0.00 38.53 4.40
1465 3500 0.877071 AGCGAATGGTGCAGAAACAG 59.123 50.000 0.00 0.00 33.85 3.16
1467 3502 1.398390 CCTAGCGAATGGTGCAGAAAC 59.602 52.381 0.00 0.00 33.85 2.78
1476 3511 1.149174 ATGGCACCCTAGCGAATGG 59.851 57.895 0.00 0.00 34.64 3.16
1481 3546 1.819632 GAACCATGGCACCCTAGCG 60.820 63.158 13.04 0.00 34.64 4.26
1483 3548 0.107017 CAGGAACCATGGCACCCTAG 60.107 60.000 13.04 7.09 0.00 3.02
1485 3550 1.729267 AACAGGAACCATGGCACCCT 61.729 55.000 13.04 12.93 0.00 4.34
1489 3554 1.907807 GGCAACAGGAACCATGGCA 60.908 57.895 13.04 0.00 38.16 4.92
1490 3555 1.907807 TGGCAACAGGAACCATGGC 60.908 57.895 13.04 0.00 46.17 4.40
1491 3556 4.517663 TGGCAACAGGAACCATGG 57.482 55.556 11.19 11.19 46.17 3.66
1503 3568 6.214191 TCAATTCAAACAGTTAGTTGGCAA 57.786 33.333 0.00 0.00 41.19 4.52
1506 3571 8.925161 TTTCTTCAATTCAAACAGTTAGTTGG 57.075 30.769 0.00 0.00 41.19 3.77
1531 3596 5.521372 GGTACAGTAAGTGTCACGACTTTTT 59.479 40.000 10.00 2.85 40.94 1.94
1532 3597 5.045872 GGTACAGTAAGTGTCACGACTTTT 58.954 41.667 10.00 4.74 40.94 2.27
1534 3599 3.633525 TGGTACAGTAAGTGTCACGACTT 59.366 43.478 10.00 0.00 40.94 3.01
1551 3616 6.017605 CAGCACCTAGAATGAATGAATGGTAC 60.018 42.308 0.00 0.00 0.00 3.34
1552 3617 6.057533 CAGCACCTAGAATGAATGAATGGTA 58.942 40.000 0.00 0.00 0.00 3.25
1553 3618 4.885907 CAGCACCTAGAATGAATGAATGGT 59.114 41.667 0.00 0.00 0.00 3.55
1554 3619 4.261489 GCAGCACCTAGAATGAATGAATGG 60.261 45.833 0.00 0.00 0.00 3.16
1555 3620 4.579340 AGCAGCACCTAGAATGAATGAATG 59.421 41.667 0.00 0.00 0.00 2.67
1556 3621 4.789807 AGCAGCACCTAGAATGAATGAAT 58.210 39.130 0.00 0.00 0.00 2.57
1557 3622 4.226427 AGCAGCACCTAGAATGAATGAA 57.774 40.909 0.00 0.00 0.00 2.57
1558 3623 3.920231 AGCAGCACCTAGAATGAATGA 57.080 42.857 0.00 0.00 0.00 2.57
1559 3624 3.488721 GCAAGCAGCACCTAGAATGAATG 60.489 47.826 0.00 0.00 44.79 2.67
1560 3625 2.686915 GCAAGCAGCACCTAGAATGAAT 59.313 45.455 0.00 0.00 44.79 2.57
1561 3626 2.086869 GCAAGCAGCACCTAGAATGAA 58.913 47.619 0.00 0.00 44.79 2.57
1562 3627 1.742761 GCAAGCAGCACCTAGAATGA 58.257 50.000 0.00 0.00 44.79 2.57
1583 3648 0.809385 CGGTTGACTAGAGAAGCGGA 59.191 55.000 16.89 0.00 38.94 5.54
1600 3676 9.309516 AGTATTACAGTAATTGTACACAATCGG 57.690 33.333 11.16 1.28 45.06 4.18
1611 3687 9.716507 GCCACAAACATAGTATTACAGTAATTG 57.283 33.333 11.16 6.20 0.00 2.32
1612 3688 8.899771 GGCCACAAACATAGTATTACAGTAATT 58.100 33.333 11.16 0.00 0.00 1.40
1613 3689 8.272173 AGGCCACAAACATAGTATTACAGTAAT 58.728 33.333 5.01 10.71 0.00 1.89
1615 3691 7.190335 AGGCCACAAACATAGTATTACAGTA 57.810 36.000 5.01 0.00 0.00 2.74
1616 3692 6.062258 AGGCCACAAACATAGTATTACAGT 57.938 37.500 5.01 0.00 0.00 3.55
1617 3693 8.677148 ATAAGGCCACAAACATAGTATTACAG 57.323 34.615 5.01 0.00 0.00 2.74
1621 3697 9.120538 CAGTAATAAGGCCACAAACATAGTATT 57.879 33.333 5.01 0.00 0.00 1.89
1622 3698 8.272173 ACAGTAATAAGGCCACAAACATAGTAT 58.728 33.333 5.01 0.00 0.00 2.12
1623 3699 7.626390 ACAGTAATAAGGCCACAAACATAGTA 58.374 34.615 5.01 0.00 0.00 1.82
1625 3701 7.120579 TCAACAGTAATAAGGCCACAAACATAG 59.879 37.037 5.01 0.00 0.00 2.23
1626 3702 6.943146 TCAACAGTAATAAGGCCACAAACATA 59.057 34.615 5.01 0.00 0.00 2.29
1627 3703 5.772672 TCAACAGTAATAAGGCCACAAACAT 59.227 36.000 5.01 0.00 0.00 2.71
1628 3704 5.133941 TCAACAGTAATAAGGCCACAAACA 58.866 37.500 5.01 0.00 0.00 2.83
1629 3705 5.699097 TCAACAGTAATAAGGCCACAAAC 57.301 39.130 5.01 0.00 0.00 2.93
1630 3706 6.943146 TGTATCAACAGTAATAAGGCCACAAA 59.057 34.615 5.01 0.00 0.00 2.83
1631 3707 6.373216 GTGTATCAACAGTAATAAGGCCACAA 59.627 38.462 5.01 0.00 35.91 3.33
1633 3709 6.113411 AGTGTATCAACAGTAATAAGGCCAC 58.887 40.000 5.01 0.00 37.51 5.01
1640 3716 6.040247 CGAGGCAAGTGTATCAACAGTAATA 58.960 40.000 0.00 0.00 38.36 0.98
1650 3726 1.134965 AGACAGCGAGGCAAGTGTATC 60.135 52.381 0.00 0.00 0.00 2.24
1651 3727 0.898320 AGACAGCGAGGCAAGTGTAT 59.102 50.000 0.00 0.00 0.00 2.29
1652 3728 1.472878 CTAGACAGCGAGGCAAGTGTA 59.527 52.381 0.00 0.00 0.00 2.90
1653 3729 0.244994 CTAGACAGCGAGGCAAGTGT 59.755 55.000 0.00 0.00 0.00 3.55
1654 3730 0.528017 TCTAGACAGCGAGGCAAGTG 59.472 55.000 0.00 0.00 0.00 3.16
1656 3732 1.269517 GGATCTAGACAGCGAGGCAAG 60.270 57.143 0.00 0.00 0.00 4.01
1661 3757 2.223900 TGCATTGGATCTAGACAGCGAG 60.224 50.000 0.00 0.00 0.00 5.03
1667 3763 2.478134 GCGATGTGCATTGGATCTAGAC 59.522 50.000 0.00 0.00 45.45 2.59
1691 3787 2.371510 AGGGATCAGAAGCAGCTTATCC 59.628 50.000 20.91 20.91 37.75 2.59
1692 3788 3.181456 ACAGGGATCAGAAGCAGCTTATC 60.181 47.826 7.92 7.72 0.00 1.75
1710 3815 7.384932 GTGACAAGAAATTTTCCCATTAACAGG 59.615 37.037 5.52 0.00 0.00 4.00
1713 3825 7.708752 TGTGTGACAAGAAATTTTCCCATTAAC 59.291 33.333 5.52 0.00 0.00 2.01
1717 3829 5.867903 TGTGTGACAAGAAATTTTCCCAT 57.132 34.783 5.52 0.00 0.00 4.00
1763 3907 6.641169 TGAGCTACTATTCCACTATCACAG 57.359 41.667 0.00 0.00 0.00 3.66
1764 3908 6.833933 TCTTGAGCTACTATTCCACTATCACA 59.166 38.462 0.00 0.00 0.00 3.58
1771 3915 6.578023 AGTCAATCTTGAGCTACTATTCCAC 58.422 40.000 0.00 0.00 37.98 4.02
1792 3936 4.453819 AGTTGCAGAGCAGACAAATAAGTC 59.546 41.667 0.00 0.00 40.61 3.01
1794 3938 6.314648 TCATAGTTGCAGAGCAGACAAATAAG 59.685 38.462 0.00 0.00 40.61 1.73
1804 3948 4.645762 CTACTCTCATAGTTGCAGAGCA 57.354 45.455 0.00 0.00 39.80 4.26
1828 3973 5.078411 ACAGCTAGTGTAAGAATCACTGG 57.922 43.478 8.54 6.90 44.41 4.00
1829 3974 6.857956 ACTACAGCTAGTGTAAGAATCACTG 58.142 40.000 8.54 0.00 44.41 3.66
1831 3976 7.813148 TGAAACTACAGCTAGTGTAAGAATCAC 59.187 37.037 0.00 0.00 41.28 3.06
1835 3988 7.892609 TGATGAAACTACAGCTAGTGTAAGAA 58.107 34.615 0.00 0.00 41.28 2.52
1837 3990 7.598869 TGTTGATGAAACTACAGCTAGTGTAAG 59.401 37.037 0.00 4.66 41.28 2.34
1838 3991 7.438564 TGTTGATGAAACTACAGCTAGTGTAA 58.561 34.615 0.00 0.00 41.28 2.41
1839 3992 6.988522 TGTTGATGAAACTACAGCTAGTGTA 58.011 36.000 0.00 0.00 37.36 2.90
1840 3993 5.853936 TGTTGATGAAACTACAGCTAGTGT 58.146 37.500 0.00 0.00 39.70 3.55
1841 3994 6.347725 GGTTGTTGATGAAACTACAGCTAGTG 60.348 42.308 0.00 0.00 43.66 2.74
1842 3995 5.701290 GGTTGTTGATGAAACTACAGCTAGT 59.299 40.000 0.00 0.00 43.66 2.57
1843 3996 5.934625 AGGTTGTTGATGAAACTACAGCTAG 59.065 40.000 0.00 0.00 43.66 3.42
1844 3997 5.865085 AGGTTGTTGATGAAACTACAGCTA 58.135 37.500 0.00 0.00 43.66 3.32
1846 3999 4.757149 AGAGGTTGTTGATGAAACTACAGC 59.243 41.667 5.44 0.00 43.66 4.40
1847 4000 5.760253 ACAGAGGTTGTTGATGAAACTACAG 59.240 40.000 5.44 0.00 43.66 2.74
1861 4014 3.434596 GGTAGGGTGAAAACAGAGGTTGT 60.435 47.826 0.00 0.00 43.45 3.32
1897 4050 9.623000 AGTAGTACGGGAATTTTATTTTAGCAT 57.377 29.630 0.00 0.00 0.00 3.79
1899 4052 9.712359 CAAGTAGTACGGGAATTTTATTTTAGC 57.288 33.333 0.00 0.00 0.00 3.09
1902 4055 8.344446 AGCAAGTAGTACGGGAATTTTATTTT 57.656 30.769 0.00 0.00 0.00 1.82
1903 4056 7.933215 AGCAAGTAGTACGGGAATTTTATTT 57.067 32.000 0.00 0.00 0.00 1.40
1904 4057 9.623000 ATTAGCAAGTAGTACGGGAATTTTATT 57.377 29.630 0.00 0.00 0.00 1.40
1905 4058 9.623000 AATTAGCAAGTAGTACGGGAATTTTAT 57.377 29.630 0.00 0.00 0.00 1.40
1906 4059 8.885722 CAATTAGCAAGTAGTACGGGAATTTTA 58.114 33.333 0.00 0.00 0.00 1.52
1907 4060 7.392393 ACAATTAGCAAGTAGTACGGGAATTTT 59.608 33.333 0.00 0.00 0.00 1.82
1908 4061 6.882678 ACAATTAGCAAGTAGTACGGGAATTT 59.117 34.615 0.00 0.00 0.00 1.82
1909 4062 6.412214 ACAATTAGCAAGTAGTACGGGAATT 58.588 36.000 0.00 0.00 0.00 2.17
1910 4063 5.985911 ACAATTAGCAAGTAGTACGGGAAT 58.014 37.500 0.00 0.00 0.00 3.01
1911 4064 5.410355 ACAATTAGCAAGTAGTACGGGAA 57.590 39.130 0.00 0.00 0.00 3.97
1912 4065 5.410355 AACAATTAGCAAGTAGTACGGGA 57.590 39.130 0.00 0.00 0.00 5.14
1913 4066 6.490566 AAAACAATTAGCAAGTAGTACGGG 57.509 37.500 0.00 0.00 0.00 5.28
1914 4067 7.744715 CAGAAAAACAATTAGCAAGTAGTACGG 59.255 37.037 0.00 0.00 0.00 4.02
1915 4068 8.280497 ACAGAAAAACAATTAGCAAGTAGTACG 58.720 33.333 0.00 0.00 0.00 3.67
1918 4071 8.903820 AGAACAGAAAAACAATTAGCAAGTAGT 58.096 29.630 0.00 0.00 0.00 2.73
1921 4074 8.250332 TGAAGAACAGAAAAACAATTAGCAAGT 58.750 29.630 0.00 0.00 0.00 3.16
1922 4075 8.633075 TGAAGAACAGAAAAACAATTAGCAAG 57.367 30.769 0.00 0.00 0.00 4.01
1923 4076 8.868916 GTTGAAGAACAGAAAAACAATTAGCAA 58.131 29.630 0.00 0.00 31.78 3.91
1925 4078 8.406172 TGTTGAAGAACAGAAAAACAATTAGC 57.594 30.769 0.00 0.00 37.15 3.09
1928 4081 8.229811 GCTTTGTTGAAGAACAGAAAAACAATT 58.770 29.630 0.00 0.00 43.03 2.32
1929 4082 7.387397 TGCTTTGTTGAAGAACAGAAAAACAAT 59.613 29.630 0.00 0.00 43.03 2.71
1932 4085 6.183360 CCTGCTTTGTTGAAGAACAGAAAAAC 60.183 38.462 0.00 0.00 43.03 2.43
1950 4103 3.960102 TGTTGTCCTGAAAATCCTGCTTT 59.040 39.130 0.00 0.00 0.00 3.51
1974 4127 2.012673 CTAACCAATGACCTCAGCAGC 58.987 52.381 0.00 0.00 0.00 5.25
2004 4157 4.953940 TTCTTTGGAATGGTTTTCCTGG 57.046 40.909 6.00 0.00 41.38 4.45
2040 4193 1.648504 TGTTCATGCAGCTCTCGATG 58.351 50.000 0.00 0.00 0.00 3.84
2151 4304 1.517257 ATCGCTTCGCAGTTCTCCG 60.517 57.895 0.00 0.00 0.00 4.63
2199 4352 0.759959 TGTCAAGGCCACGGAAGTTA 59.240 50.000 5.01 0.00 46.40 2.24
2243 4396 0.526662 GTCCCTGTGTCGGTGTAGAG 59.473 60.000 0.00 0.00 0.00 2.43
2245 4398 0.038526 GTGTCCCTGTGTCGGTGTAG 60.039 60.000 0.00 0.00 0.00 2.74
2302 4455 7.772332 ATTTACATACTACTCCAAGAAAGCG 57.228 36.000 0.00 0.00 0.00 4.68
2310 4463 8.375493 AGACCAGAAATTTACATACTACTCCA 57.625 34.615 0.00 0.00 0.00 3.86
2311 4464 8.475639 TGAGACCAGAAATTTACATACTACTCC 58.524 37.037 0.00 0.00 0.00 3.85
2358 4517 3.698040 AGCTCAAGGCAAACATAATCCAG 59.302 43.478 0.00 0.00 44.79 3.86
2398 4565 6.833933 ACCTAACCAGATGAAACTCAAAACTT 59.166 34.615 0.00 0.00 0.00 2.66
2412 4580 4.280929 GCAGGAAACAAAACCTAACCAGAT 59.719 41.667 0.00 0.00 34.87 2.90
2416 4584 4.280929 AGATGCAGGAAACAAAACCTAACC 59.719 41.667 0.00 0.00 34.87 2.85
2444 4613 5.348986 CAAGCGTTAGTCCAGCTCTATTAA 58.651 41.667 0.00 0.00 40.78 1.40
2447 4616 2.101582 CCAAGCGTTAGTCCAGCTCTAT 59.898 50.000 0.00 0.00 40.78 1.98
2452 4621 2.399356 GCCCAAGCGTTAGTCCAGC 61.399 63.158 0.00 0.00 0.00 4.85
2462 4631 0.594796 GACAAACTGTTGCCCAAGCG 60.595 55.000 0.00 0.00 44.31 4.68
2499 4779 6.208994 CGCAGTTATAACTAGAGGGAATACCT 59.791 42.308 17.62 0.00 45.58 3.08
2608 4888 6.183360 ACGTAGATTAACTACTGGCCAATCAT 60.183 38.462 7.01 0.00 46.49 2.45
2694 4983 5.500234 TCACATCAAGCCAGTTAAATAGCT 58.500 37.500 0.00 0.00 37.10 3.32
2757 5046 6.152661 CCTAACATGACCATAAAAAGAGGCAA 59.847 38.462 0.00 0.00 0.00 4.52
2879 5189 5.007385 AGCTAACGGATTACAGTTACTGG 57.993 43.478 17.21 0.00 36.09 4.00
2892 5202 7.553334 AGAACATTATTACAAGAGCTAACGGA 58.447 34.615 0.00 0.00 0.00 4.69
2910 5220 6.656270 TCATGAGTTATGCACTGAAGAACATT 59.344 34.615 0.00 0.00 35.01 2.71
2911 5221 6.093219 GTCATGAGTTATGCACTGAAGAACAT 59.907 38.462 0.00 0.00 35.01 2.71
2912 5222 5.409520 GTCATGAGTTATGCACTGAAGAACA 59.590 40.000 0.00 0.00 35.01 3.18
2936 5246 2.154462 CCTGCACCAAAGTAGGTTCTG 58.846 52.381 0.00 0.00 40.77 3.02
2937 5247 2.568623 CCTGCACCAAAGTAGGTTCT 57.431 50.000 0.00 0.00 40.77 3.01
3039 5349 2.225019 ACTCTTTTGTGCAGCATCTTCG 59.775 45.455 0.00 0.00 0.00 3.79
3046 5356 1.678101 ACCTTCACTCTTTTGTGCAGC 59.322 47.619 0.00 0.00 37.81 5.25
3092 5402 2.105766 GGAAGCTGCCATCATTTTCCT 58.894 47.619 5.59 0.00 34.43 3.36
3108 5418 0.030638 CGTGTTTTGCACCTGGGAAG 59.969 55.000 0.00 0.00 44.97 3.46
3192 5502 3.004106 GCTGTAGAATAAGCCCATTGCAG 59.996 47.826 0.00 0.00 44.83 4.41
3216 5526 2.605580 GCTAAAAGACACAGGCACAAGC 60.606 50.000 0.00 0.00 41.10 4.01
3228 5538 4.097286 TGGTCTTGTTGGTTGCTAAAAGAC 59.903 41.667 5.08 5.08 41.65 3.01
3234 5544 1.604604 GCTGGTCTTGTTGGTTGCTA 58.395 50.000 0.00 0.00 0.00 3.49
3239 5549 1.525995 CGTGGCTGGTCTTGTTGGT 60.526 57.895 0.00 0.00 0.00 3.67
3254 5564 1.790623 CAGTAGGTTGGTTCGAACGTG 59.209 52.381 21.34 5.43 0.00 4.49
3257 5567 5.050567 CAGTAAACAGTAGGTTGGTTCGAAC 60.051 44.000 20.14 20.14 40.35 3.95
3258 5568 5.051816 CAGTAAACAGTAGGTTGGTTCGAA 58.948 41.667 0.00 0.00 40.35 3.71
3260 5570 4.374399 ACAGTAAACAGTAGGTTGGTTCG 58.626 43.478 0.00 0.00 40.35 3.95
3267 5577 7.663905 TGATTTTGCATACAGTAAACAGTAGGT 59.336 33.333 0.00 0.00 31.28 3.08
3268 5578 8.039603 TGATTTTGCATACAGTAAACAGTAGG 57.960 34.615 0.00 0.00 31.28 3.18
3280 5590 2.094078 GCTGGCCTTGATTTTGCATACA 60.094 45.455 3.32 0.00 0.00 2.29
3282 5592 1.481772 GGCTGGCCTTGATTTTGCATA 59.518 47.619 3.32 0.00 0.00 3.14
3283 5593 0.251073 GGCTGGCCTTGATTTTGCAT 59.749 50.000 3.32 0.00 0.00 3.96
3284 5594 0.832983 AGGCTGGCCTTGATTTTGCA 60.833 50.000 8.50 0.00 45.70 4.08
3369 5679 2.297315 CTCAACTACAGTCTGTGGCTGA 59.703 50.000 18.14 18.14 32.74 4.26
3406 5737 0.809385 CAATGGTGCTGAGCTTGGAG 59.191 55.000 5.83 0.00 0.00 3.86
3540 5871 1.416030 TGCAGTTGAACTACCTGAGCA 59.584 47.619 0.00 0.00 0.00 4.26
3547 5878 5.452777 GGAAGATGTTTGCAGTTGAACTAC 58.547 41.667 0.00 0.00 0.00 2.73
3549 5880 3.319122 GGGAAGATGTTTGCAGTTGAACT 59.681 43.478 0.00 0.00 0.00 3.01
3693 6024 3.604582 CTTTCGCTGGGAAGAAGAGATT 58.395 45.455 7.24 0.00 35.70 2.40
3732 6063 0.041312 CGCTGCTTTGCACGTAAACT 60.041 50.000 0.00 0.00 33.79 2.66
3774 6105 2.001361 GCTGGTGCTGGATGTGATGC 62.001 60.000 0.00 0.00 36.03 3.91
4002 6333 2.045926 GCCGGGTGATTCTGCACT 60.046 61.111 2.18 0.00 38.78 4.40
4017 6348 1.310933 CCTTGTCAGCCATGTCTGCC 61.311 60.000 0.00 0.00 34.19 4.85
4120 6451 2.825836 CAGCCCGTCATGGAAGGC 60.826 66.667 11.48 11.48 46.13 4.35
4158 6489 1.136984 CGTCGACTAGCCAGACCAC 59.863 63.158 14.70 0.00 0.00 4.16
4177 6508 0.745845 ATCACATGCGGCTTCTCCAC 60.746 55.000 0.00 0.00 34.01 4.02
4196 6527 0.463204 GCAGGAGCAGATAGAGTGCA 59.537 55.000 0.00 0.00 43.82 4.57
4203 6534 2.418746 GGAAAAGTCGCAGGAGCAGATA 60.419 50.000 0.00 0.00 42.27 1.98
4231 6562 0.930310 CAAGATCGCCACACCGTATG 59.070 55.000 0.00 0.00 0.00 2.39
4236 6567 0.517316 GACAACAAGATCGCCACACC 59.483 55.000 0.00 0.00 0.00 4.16
4250 6581 0.674895 AGCGAGCTTCCCATGACAAC 60.675 55.000 0.00 0.00 0.00 3.32
4255 6586 1.131883 CTCAAAAGCGAGCTTCCCATG 59.868 52.381 11.01 8.28 34.84 3.66
4309 6640 1.324740 ACGTACCAATCTGCCGGCTA 61.325 55.000 29.70 16.70 0.00 3.93
4379 6713 5.204292 TCATCACTCAGACTAACCTAGCAT 58.796 41.667 0.00 0.00 0.00 3.79
4382 6716 6.951062 TCATCATCACTCAGACTAACCTAG 57.049 41.667 0.00 0.00 0.00 3.02
4383 6717 7.343057 ACAATCATCATCACTCAGACTAACCTA 59.657 37.037 0.00 0.00 0.00 3.08
4384 6718 6.155910 ACAATCATCATCACTCAGACTAACCT 59.844 38.462 0.00 0.00 0.00 3.50
4386 6720 6.198029 CGACAATCATCATCACTCAGACTAAC 59.802 42.308 0.00 0.00 0.00 2.34
4388 6722 5.221126 CCGACAATCATCATCACTCAGACTA 60.221 44.000 0.00 0.00 0.00 2.59
4389 6723 4.441217 CCGACAATCATCATCACTCAGACT 60.441 45.833 0.00 0.00 0.00 3.24
4390 6724 3.801050 CCGACAATCATCATCACTCAGAC 59.199 47.826 0.00 0.00 0.00 3.51
4391 6725 3.739209 GCCGACAATCATCATCACTCAGA 60.739 47.826 0.00 0.00 0.00 3.27
4392 6726 2.543012 GCCGACAATCATCATCACTCAG 59.457 50.000 0.00 0.00 0.00 3.35
4393 6727 2.093553 TGCCGACAATCATCATCACTCA 60.094 45.455 0.00 0.00 0.00 3.41
4517 6852 3.310774 CACACACTGAACAAGAAGGTGAG 59.689 47.826 0.00 0.00 33.36 3.51
4594 6930 2.412325 CGAACAATTACTGCCAACGGAC 60.412 50.000 0.00 0.00 0.00 4.79
4597 6933 2.961522 ACGAACAATTACTGCCAACG 57.038 45.000 0.00 0.00 0.00 4.10
4609 6945 3.446310 TCTCACAGCAAGTACGAACAA 57.554 42.857 0.00 0.00 0.00 2.83
4614 6950 6.073765 ACTGTAAATTTCTCACAGCAAGTACG 60.074 38.462 16.15 0.00 42.76 3.67
4666 7004 0.693049 AGTTACTTCCCCCACAGCAG 59.307 55.000 0.00 0.00 0.00 4.24
4697 7035 4.036262 TCGGTTTTGGCAGAATGTATATGC 59.964 41.667 0.00 0.00 39.31 3.14
4703 7041 2.034558 CACTTCGGTTTTGGCAGAATGT 59.965 45.455 0.00 0.00 39.31 2.71
4708 7046 1.021202 TGACACTTCGGTTTTGGCAG 58.979 50.000 0.00 0.00 0.00 4.85
4711 7049 5.030874 GTCTTATGACACTTCGGTTTTGG 57.969 43.478 3.96 0.00 42.48 3.28
4749 7092 6.928348 TGAGTATTCCCTTTCAGTTCAGTA 57.072 37.500 0.00 0.00 0.00 2.74
4764 7107 6.220201 GCCTAGTTCTCCAGAATGAGTATTC 58.780 44.000 0.00 0.00 42.44 1.75
4788 7131 3.536956 ATTCATTGGAATGCAAGCAGG 57.463 42.857 0.00 0.00 42.10 4.85
4805 7159 1.667724 CTTCAGGTGGCATCGTCATTC 59.332 52.381 0.00 0.00 0.00 2.67
4811 7165 2.110967 CAGGCTTCAGGTGGCATCG 61.111 63.158 0.00 0.00 0.00 3.84
4818 7172 2.759795 GGGCTTCAGGCTTCAGGT 59.240 61.111 0.00 0.00 41.46 4.00
4819 7173 1.274703 TAGGGGCTTCAGGCTTCAGG 61.275 60.000 0.00 0.00 41.46 3.86
4820 7174 0.107459 GTAGGGGCTTCAGGCTTCAG 60.107 60.000 0.00 0.00 41.46 3.02
4821 7175 0.547712 AGTAGGGGCTTCAGGCTTCA 60.548 55.000 0.00 0.00 41.46 3.02
4822 7176 0.107459 CAGTAGGGGCTTCAGGCTTC 60.107 60.000 0.00 0.00 41.46 3.86
4823 7177 0.547712 TCAGTAGGGGCTTCAGGCTT 60.548 55.000 0.00 0.00 41.46 4.35
4824 7178 0.327000 ATCAGTAGGGGCTTCAGGCT 60.327 55.000 0.00 0.00 41.46 4.58
4855 7209 3.833070 TCCCAGAAGGTTCAGTAAGTCTC 59.167 47.826 0.00 0.00 36.75 3.36
4894 7249 4.963318 AGAGAGACCTTTGACATGAACA 57.037 40.909 0.00 0.00 0.00 3.18
4909 7264 4.020128 GCCTGGAGGAAACTAAAAGAGAGA 60.020 45.833 0.00 0.00 44.43 3.10
4939 7294 5.507077 TCGAGAAATGAACAACTTTTTCCG 58.493 37.500 0.00 0.00 0.00 4.30
4941 7296 6.633234 GGACTCGAGAAATGAACAACTTTTTC 59.367 38.462 21.68 0.00 0.00 2.29
4945 7300 4.703897 TGGACTCGAGAAATGAACAACTT 58.296 39.130 21.68 0.00 0.00 2.66
4946 7301 4.336889 TGGACTCGAGAAATGAACAACT 57.663 40.909 21.68 0.00 0.00 3.16
4948 7303 4.878971 TGTTTGGACTCGAGAAATGAACAA 59.121 37.500 21.68 9.74 0.00 2.83
4971 7326 6.147437 TGGACCATCTTAAATTGGTTAGGT 57.853 37.500 9.67 0.00 46.14 3.08
5002 7357 7.691213 TGTTAACCTGACTGTTATTATGGGAA 58.309 34.615 2.48 0.00 31.19 3.97
5016 7371 5.689383 ACAATGTCACATGTTAACCTGAC 57.311 39.130 16.57 16.24 34.74 3.51
5028 7385 6.040504 AGACTGTCAGTTAGTACAATGTCACA 59.959 38.462 7.00 0.00 0.00 3.58
5035 7392 5.221185 GGTGTCAGACTGTCAGTTAGTACAA 60.221 44.000 7.00 0.00 0.00 2.41
5042 7399 2.808202 GCATGGTGTCAGACTGTCAGTT 60.808 50.000 7.00 0.00 0.00 3.16
5046 7403 2.232452 ACTAGCATGGTGTCAGACTGTC 59.768 50.000 7.89 0.00 0.00 3.51
5047 7404 2.232452 GACTAGCATGGTGTCAGACTGT 59.768 50.000 7.89 0.00 0.00 3.55
5048 7405 2.232208 TGACTAGCATGGTGTCAGACTG 59.768 50.000 19.41 0.00 36.03 3.51
5049 7406 2.529632 TGACTAGCATGGTGTCAGACT 58.470 47.619 19.41 0.00 36.03 3.24
5104 7461 8.739039 TGAGTTTAATATTCATTCTGTGGTTGG 58.261 33.333 0.00 0.00 0.00 3.77
5129 7486 2.744202 GGTTGTGTATGCTCAGACCTTG 59.256 50.000 8.71 0.00 0.00 3.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.