Multiple sequence alignment - TraesCS1B01G420900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G420900 chr1B 100.000 3341 0 0 1 3341 644800026 644796686 0.000000e+00 6170.0
1 TraesCS1B01G420900 chr1B 88.542 768 79 3 977 1744 643908323 643907565 0.000000e+00 922.0
2 TraesCS1B01G420900 chr1B 86.861 822 80 15 985 1788 644527399 644526588 0.000000e+00 894.0
3 TraesCS1B01G420900 chr1B 84.046 702 84 8 1073 1762 644310619 644311304 0.000000e+00 651.0
4 TraesCS1B01G420900 chr1B 89.412 425 42 1 985 1409 644341714 644342135 1.760000e-147 532.0
5 TraesCS1B01G420900 chr1B 88.385 353 20 6 2012 2343 644526307 644525955 4.010000e-109 405.0
6 TraesCS1B01G420900 chr1B 85.789 380 32 13 1380 1749 645095715 645096082 1.880000e-102 383.0
7 TraesCS1B01G420900 chr1B 92.803 264 18 1 1994 2256 644311463 644311726 6.760000e-102 381.0
8 TraesCS1B01G420900 chr1B 93.407 91 5 1 2000 2089 643907237 643907147 2.090000e-27 134.0
9 TraesCS1B01G420900 chr1D 91.236 1974 97 28 421 2344 467298796 467300743 0.000000e+00 2617.0
10 TraesCS1B01G420900 chr1D 85.743 989 105 20 796 1774 467108731 467107769 0.000000e+00 1013.0
11 TraesCS1B01G420900 chr1D 88.301 359 25 9 2000 2341 467107446 467107088 6.670000e-112 414.0
12 TraesCS1B01G420900 chr1D 90.000 320 15 3 2619 2921 467310913 467311232 6.720000e-107 398.0
13 TraesCS1B01G420900 chr1D 90.083 242 19 4 172 410 467298486 467298725 3.240000e-80 309.0
14 TraesCS1B01G420900 chr1D 95.930 172 4 3 2458 2628 467300754 467300923 3.280000e-70 276.0
15 TraesCS1B01G420900 chr1D 93.333 90 6 0 2928 3017 467311803 467311892 2.090000e-27 134.0
16 TraesCS1B01G420900 chr1A 91.424 1341 73 17 478 1791 559348790 559350115 0.000000e+00 1801.0
17 TraesCS1B01G420900 chr1A 87.596 911 56 26 1803 2679 559350164 559351051 0.000000e+00 1003.0
18 TraesCS1B01G420900 chr1A 84.894 993 106 24 808 1774 559045770 559044796 0.000000e+00 963.0
19 TraesCS1B01G420900 chr1A 88.643 361 24 9 1997 2341 559044492 559044133 1.110000e-114 424.0
20 TraesCS1B01G420900 chr1A 91.882 271 13 4 1994 2256 559232409 559232140 1.460000e-98 370.0
21 TraesCS1B01G420900 chr1A 88.136 177 19 2 177 351 559347869 559348045 3.380000e-50 209.0
22 TraesCS1B01G420900 chr1A 89.394 66 7 0 1697 1762 559232658 559232593 2.140000e-12 84.2
23 TraesCS1B01G420900 chr1A 87.143 70 8 1 620 688 559045986 559045917 9.940000e-11 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G420900 chr1B 644796686 644800026 3340 True 6170.000000 6170 100.000000 1 3341 1 chr1B.!!$R1 3340
1 TraesCS1B01G420900 chr1B 644525955 644527399 1444 True 649.500000 894 87.623000 985 2343 2 chr1B.!!$R3 1358
2 TraesCS1B01G420900 chr1B 643907147 643908323 1176 True 528.000000 922 90.974500 977 2089 2 chr1B.!!$R2 1112
3 TraesCS1B01G420900 chr1B 644310619 644311726 1107 False 516.000000 651 88.424500 1073 2256 2 chr1B.!!$F3 1183
4 TraesCS1B01G420900 chr1D 467298486 467300923 2437 False 1067.333333 2617 92.416333 172 2628 3 chr1D.!!$F1 2456
5 TraesCS1B01G420900 chr1D 467107088 467108731 1643 True 713.500000 1013 87.022000 796 2341 2 chr1D.!!$R1 1545
6 TraesCS1B01G420900 chr1D 467310913 467311892 979 False 266.000000 398 91.666500 2619 3017 2 chr1D.!!$F2 398
7 TraesCS1B01G420900 chr1A 559347869 559351051 3182 False 1004.333333 1801 89.052000 177 2679 3 chr1A.!!$F1 2502
8 TraesCS1B01G420900 chr1A 559044133 559045986 1853 True 488.566667 963 86.893333 620 2341 3 chr1A.!!$R1 1721
9 TraesCS1B01G420900 chr1A 559232140 559232658 518 True 227.100000 370 90.638000 1697 2256 2 chr1A.!!$R2 559

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
142 143 0.033796 ATCGTCCCCACCGTCTTCTA 60.034 55.0 0.00 0.00 0.0 2.10 F
244 245 0.249280 GTGACCCGCCTTTTGTTTGG 60.249 55.0 0.00 0.00 0.0 3.28 F
957 1726 0.321653 AACCAGGTGCGCTCTTTAGG 60.322 55.0 9.73 8.54 0.0 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1791 2612 1.587613 GCTTGGTTTGCGTTGCGAA 60.588 52.632 0.0 0.0 0.0 4.70 R
1792 2613 2.025441 GCTTGGTTTGCGTTGCGA 59.975 55.556 0.0 0.0 0.0 5.10 R
2804 3904 0.105964 TGGGTGAGAAACTGTGTCCG 59.894 55.000 0.0 0.0 0.0 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 6.385649 TTTTTCGAACTGGTAAAGCTCATT 57.614 33.333 0.00 0.00 0.00 2.57
46 47 5.607119 TTTCGAACTGGTAAAGCTCATTC 57.393 39.130 0.00 0.00 0.00 2.67
47 48 4.537135 TCGAACTGGTAAAGCTCATTCT 57.463 40.909 0.00 0.00 0.00 2.40
48 49 5.654603 TCGAACTGGTAAAGCTCATTCTA 57.345 39.130 0.00 0.00 0.00 2.10
49 50 6.032956 TCGAACTGGTAAAGCTCATTCTAA 57.967 37.500 0.00 0.00 0.00 2.10
50 51 6.640518 TCGAACTGGTAAAGCTCATTCTAAT 58.359 36.000 0.00 0.00 0.00 1.73
51 52 7.103641 TCGAACTGGTAAAGCTCATTCTAATT 58.896 34.615 0.00 0.00 0.00 1.40
52 53 8.255206 TCGAACTGGTAAAGCTCATTCTAATTA 58.745 33.333 0.00 0.00 0.00 1.40
53 54 8.328864 CGAACTGGTAAAGCTCATTCTAATTAC 58.671 37.037 0.00 0.00 0.00 1.89
54 55 9.162764 GAACTGGTAAAGCTCATTCTAATTACA 57.837 33.333 0.00 0.00 0.00 2.41
55 56 9.515226 AACTGGTAAAGCTCATTCTAATTACAA 57.485 29.630 0.00 0.00 0.00 2.41
56 57 9.686683 ACTGGTAAAGCTCATTCTAATTACAAT 57.313 29.630 0.00 0.00 0.00 2.71
57 58 9.941664 CTGGTAAAGCTCATTCTAATTACAATG 57.058 33.333 7.03 7.03 0.00 2.82
58 59 9.679661 TGGTAAAGCTCATTCTAATTACAATGA 57.320 29.630 13.47 13.47 36.80 2.57
78 79 9.778993 ACAATGAGAAAAATAAGATGACGAATG 57.221 29.630 0.00 0.00 0.00 2.67
79 80 9.229784 CAATGAGAAAAATAAGATGACGAATGG 57.770 33.333 0.00 0.00 0.00 3.16
80 81 7.320443 TGAGAAAAATAAGATGACGAATGGG 57.680 36.000 0.00 0.00 0.00 4.00
81 82 6.884295 TGAGAAAAATAAGATGACGAATGGGT 59.116 34.615 0.00 0.00 0.00 4.51
82 83 8.044309 TGAGAAAAATAAGATGACGAATGGGTA 58.956 33.333 0.00 0.00 0.00 3.69
83 84 8.438676 AGAAAAATAAGATGACGAATGGGTAG 57.561 34.615 0.00 0.00 0.00 3.18
84 85 6.619801 AAAATAAGATGACGAATGGGTAGC 57.380 37.500 0.00 0.00 0.00 3.58
85 86 2.622064 AAGATGACGAATGGGTAGCC 57.378 50.000 3.29 3.29 0.00 3.93
86 87 1.794714 AGATGACGAATGGGTAGCCT 58.205 50.000 13.11 0.00 0.00 4.58
87 88 2.958818 AGATGACGAATGGGTAGCCTA 58.041 47.619 13.11 0.00 0.00 3.93
88 89 3.511477 AGATGACGAATGGGTAGCCTAT 58.489 45.455 13.11 0.13 0.00 2.57
89 90 3.259374 AGATGACGAATGGGTAGCCTATG 59.741 47.826 13.11 2.19 0.00 2.23
90 91 1.070134 TGACGAATGGGTAGCCTATGC 59.930 52.381 13.11 2.16 37.95 3.14
91 92 1.070134 GACGAATGGGTAGCCTATGCA 59.930 52.381 13.11 0.00 41.13 3.96
92 93 1.699634 ACGAATGGGTAGCCTATGCAT 59.300 47.619 13.11 3.79 41.13 3.96
93 94 2.289694 ACGAATGGGTAGCCTATGCATC 60.290 50.000 13.11 0.00 41.13 3.91
94 95 2.289631 CGAATGGGTAGCCTATGCATCA 60.290 50.000 13.11 0.00 41.13 3.07
95 96 3.754965 GAATGGGTAGCCTATGCATCAA 58.245 45.455 13.11 0.00 41.13 2.57
96 97 2.936919 TGGGTAGCCTATGCATCAAG 57.063 50.000 13.11 0.00 41.13 3.02
97 98 2.126882 TGGGTAGCCTATGCATCAAGT 58.873 47.619 13.11 0.00 41.13 3.16
98 99 2.509548 TGGGTAGCCTATGCATCAAGTT 59.490 45.455 13.11 0.00 41.13 2.66
99 100 2.880890 GGGTAGCCTATGCATCAAGTTG 59.119 50.000 0.19 0.00 41.13 3.16
100 101 3.545703 GGTAGCCTATGCATCAAGTTGT 58.454 45.455 0.19 0.00 41.13 3.32
101 102 4.444306 GGGTAGCCTATGCATCAAGTTGTA 60.444 45.833 0.19 0.00 41.13 2.41
102 103 5.308825 GGTAGCCTATGCATCAAGTTGTAT 58.691 41.667 0.19 0.00 41.13 2.29
103 104 5.765182 GGTAGCCTATGCATCAAGTTGTATT 59.235 40.000 0.19 0.00 41.13 1.89
104 105 6.073003 GGTAGCCTATGCATCAAGTTGTATTC 60.073 42.308 0.19 0.00 41.13 1.75
105 106 5.439721 AGCCTATGCATCAAGTTGTATTCA 58.560 37.500 0.19 0.00 41.13 2.57
106 107 6.066690 AGCCTATGCATCAAGTTGTATTCAT 58.933 36.000 0.19 4.64 41.13 2.57
107 108 6.016527 AGCCTATGCATCAAGTTGTATTCATG 60.017 38.462 0.19 0.07 41.13 3.07
108 109 6.675026 CCTATGCATCAAGTTGTATTCATGG 58.325 40.000 0.19 4.17 0.00 3.66
109 110 4.987408 TGCATCAAGTTGTATTCATGGG 57.013 40.909 2.11 0.00 0.00 4.00
110 111 4.343231 TGCATCAAGTTGTATTCATGGGT 58.657 39.130 2.11 0.00 0.00 4.51
111 112 4.771577 TGCATCAAGTTGTATTCATGGGTT 59.228 37.500 2.11 0.00 0.00 4.11
112 113 5.245751 TGCATCAAGTTGTATTCATGGGTTT 59.754 36.000 2.11 0.00 0.00 3.27
113 114 5.807011 GCATCAAGTTGTATTCATGGGTTTC 59.193 40.000 2.11 0.00 0.00 2.78
114 115 6.350445 GCATCAAGTTGTATTCATGGGTTTCT 60.350 38.462 2.11 0.00 0.00 2.52
115 116 7.605449 CATCAAGTTGTATTCATGGGTTTCTT 58.395 34.615 2.11 0.00 0.00 2.52
116 117 7.214467 TCAAGTTGTATTCATGGGTTTCTTC 57.786 36.000 2.11 0.00 0.00 2.87
117 118 7.004086 TCAAGTTGTATTCATGGGTTTCTTCT 58.996 34.615 2.11 0.00 0.00 2.85
118 119 8.160765 TCAAGTTGTATTCATGGGTTTCTTCTA 58.839 33.333 2.11 0.00 0.00 2.10
119 120 7.923414 AGTTGTATTCATGGGTTTCTTCTAC 57.077 36.000 0.00 0.00 0.00 2.59
120 121 6.884836 AGTTGTATTCATGGGTTTCTTCTACC 59.115 38.462 0.00 0.00 34.82 3.18
121 122 6.381498 TGTATTCATGGGTTTCTTCTACCA 57.619 37.500 0.00 0.00 37.40 3.25
122 123 6.177610 TGTATTCATGGGTTTCTTCTACCAC 58.822 40.000 0.00 0.00 37.40 4.16
123 124 4.715534 TTCATGGGTTTCTTCTACCACA 57.284 40.909 0.00 0.00 37.40 4.17
124 125 4.927267 TCATGGGTTTCTTCTACCACAT 57.073 40.909 0.00 0.00 37.40 3.21
125 126 4.843728 TCATGGGTTTCTTCTACCACATC 58.156 43.478 0.00 0.00 37.40 3.06
126 127 3.328382 TGGGTTTCTTCTACCACATCG 57.672 47.619 0.00 0.00 37.40 3.84
127 128 2.635915 TGGGTTTCTTCTACCACATCGT 59.364 45.455 0.00 0.00 37.40 3.73
128 129 3.259902 GGGTTTCTTCTACCACATCGTC 58.740 50.000 0.00 0.00 37.40 4.20
129 130 3.259902 GGTTTCTTCTACCACATCGTCC 58.740 50.000 0.00 0.00 35.67 4.79
130 131 3.259902 GTTTCTTCTACCACATCGTCCC 58.740 50.000 0.00 0.00 0.00 4.46
131 132 1.481871 TCTTCTACCACATCGTCCCC 58.518 55.000 0.00 0.00 0.00 4.81
132 133 1.191535 CTTCTACCACATCGTCCCCA 58.808 55.000 0.00 0.00 0.00 4.96
133 134 0.899720 TTCTACCACATCGTCCCCAC 59.100 55.000 0.00 0.00 0.00 4.61
134 135 0.974010 TCTACCACATCGTCCCCACC 60.974 60.000 0.00 0.00 0.00 4.61
135 136 2.292794 CTACCACATCGTCCCCACCG 62.293 65.000 0.00 0.00 0.00 4.94
136 137 3.702048 CCACATCGTCCCCACCGT 61.702 66.667 0.00 0.00 0.00 4.83
137 138 2.125673 CACATCGTCCCCACCGTC 60.126 66.667 0.00 0.00 0.00 4.79
138 139 2.283676 ACATCGTCCCCACCGTCT 60.284 61.111 0.00 0.00 0.00 4.18
139 140 1.911766 ACATCGTCCCCACCGTCTT 60.912 57.895 0.00 0.00 0.00 3.01
140 141 1.153628 CATCGTCCCCACCGTCTTC 60.154 63.158 0.00 0.00 0.00 2.87
141 142 1.305046 ATCGTCCCCACCGTCTTCT 60.305 57.895 0.00 0.00 0.00 2.85
142 143 0.033796 ATCGTCCCCACCGTCTTCTA 60.034 55.000 0.00 0.00 0.00 2.10
143 144 0.679002 TCGTCCCCACCGTCTTCTAG 60.679 60.000 0.00 0.00 0.00 2.43
144 145 1.516423 GTCCCCACCGTCTTCTAGC 59.484 63.158 0.00 0.00 0.00 3.42
145 146 1.077805 TCCCCACCGTCTTCTAGCA 59.922 57.895 0.00 0.00 0.00 3.49
146 147 1.218316 CCCCACCGTCTTCTAGCAC 59.782 63.158 0.00 0.00 0.00 4.40
147 148 1.218316 CCCACCGTCTTCTAGCACC 59.782 63.158 0.00 0.00 0.00 5.01
148 149 1.218316 CCACCGTCTTCTAGCACCC 59.782 63.158 0.00 0.00 0.00 4.61
149 150 1.258445 CCACCGTCTTCTAGCACCCT 61.258 60.000 0.00 0.00 0.00 4.34
150 151 0.608640 CACCGTCTTCTAGCACCCTT 59.391 55.000 0.00 0.00 0.00 3.95
151 152 1.002087 CACCGTCTTCTAGCACCCTTT 59.998 52.381 0.00 0.00 0.00 3.11
152 153 1.002087 ACCGTCTTCTAGCACCCTTTG 59.998 52.381 0.00 0.00 0.00 2.77
153 154 1.275291 CCGTCTTCTAGCACCCTTTGA 59.725 52.381 0.00 0.00 0.00 2.69
154 155 2.338500 CGTCTTCTAGCACCCTTTGAC 58.662 52.381 0.00 0.00 0.00 3.18
155 156 2.701107 GTCTTCTAGCACCCTTTGACC 58.299 52.381 0.00 0.00 0.00 4.02
156 157 2.303311 GTCTTCTAGCACCCTTTGACCT 59.697 50.000 0.00 0.00 0.00 3.85
157 158 2.979678 TCTTCTAGCACCCTTTGACCTT 59.020 45.455 0.00 0.00 0.00 3.50
158 159 3.394606 TCTTCTAGCACCCTTTGACCTTT 59.605 43.478 0.00 0.00 0.00 3.11
159 160 3.418684 TCTAGCACCCTTTGACCTTTC 57.581 47.619 0.00 0.00 0.00 2.62
160 161 2.979678 TCTAGCACCCTTTGACCTTTCT 59.020 45.455 0.00 0.00 0.00 2.52
161 162 4.164981 TCTAGCACCCTTTGACCTTTCTA 58.835 43.478 0.00 0.00 0.00 2.10
162 163 3.876309 AGCACCCTTTGACCTTTCTAA 57.124 42.857 0.00 0.00 0.00 2.10
163 164 4.388577 AGCACCCTTTGACCTTTCTAAT 57.611 40.909 0.00 0.00 0.00 1.73
164 165 5.514500 AGCACCCTTTGACCTTTCTAATA 57.486 39.130 0.00 0.00 0.00 0.98
165 166 5.254115 AGCACCCTTTGACCTTTCTAATAC 58.746 41.667 0.00 0.00 0.00 1.89
166 167 5.014228 AGCACCCTTTGACCTTTCTAATACT 59.986 40.000 0.00 0.00 0.00 2.12
167 168 5.354513 GCACCCTTTGACCTTTCTAATACTC 59.645 44.000 0.00 0.00 0.00 2.59
168 169 5.880887 CACCCTTTGACCTTTCTAATACTCC 59.119 44.000 0.00 0.00 0.00 3.85
169 170 5.045066 ACCCTTTGACCTTTCTAATACTCCC 60.045 44.000 0.00 0.00 0.00 4.30
170 171 5.191921 CCCTTTGACCTTTCTAATACTCCCT 59.808 44.000 0.00 0.00 0.00 4.20
171 172 6.297068 CCCTTTGACCTTTCTAATACTCCCTT 60.297 42.308 0.00 0.00 0.00 3.95
172 173 7.175797 CCTTTGACCTTTCTAATACTCCCTTT 58.824 38.462 0.00 0.00 0.00 3.11
173 174 7.121315 CCTTTGACCTTTCTAATACTCCCTTTG 59.879 40.741 0.00 0.00 0.00 2.77
174 175 6.697641 TGACCTTTCTAATACTCCCTTTGT 57.302 37.500 0.00 0.00 0.00 2.83
175 176 6.472887 TGACCTTTCTAATACTCCCTTTGTG 58.527 40.000 0.00 0.00 0.00 3.33
176 177 5.816682 ACCTTTCTAATACTCCCTTTGTGG 58.183 41.667 0.00 0.00 0.00 4.17
177 178 5.550403 ACCTTTCTAATACTCCCTTTGTGGA 59.450 40.000 0.00 0.00 38.35 4.02
178 179 6.045106 ACCTTTCTAATACTCCCTTTGTGGAA 59.955 38.462 0.00 0.00 38.35 3.53
179 180 6.374613 CCTTTCTAATACTCCCTTTGTGGAAC 59.625 42.308 0.00 0.00 38.35 3.62
180 181 5.080969 TCTAATACTCCCTTTGTGGAACG 57.919 43.478 0.00 0.00 42.39 3.95
196 197 0.316204 AACGGAGGAAGTACCACACG 59.684 55.000 0.00 0.00 42.04 4.49
231 232 3.181476 ACAACTTGCATTTTCAGTGACCC 60.181 43.478 0.00 0.00 0.00 4.46
244 245 0.249280 GTGACCCGCCTTTTGTTTGG 60.249 55.000 0.00 0.00 0.00 3.28
251 252 1.801025 CGCCTTTTGTTTGGGTGTGTC 60.801 52.381 0.00 0.00 0.00 3.67
265 267 1.888512 GTGTGTCTACGGGTCACCTTA 59.111 52.381 0.00 0.00 33.28 2.69
286 288 7.983484 ACCTTATACGTGGTGTTATAAAAGGAG 59.017 37.037 0.00 0.00 34.90 3.69
293 295 7.933033 ACGTGGTGTTATAAAAGGAGAAAACTA 59.067 33.333 0.00 0.00 0.00 2.24
324 326 3.268330 CGATGATAGGGGCAATGATCAG 58.732 50.000 0.09 0.00 32.12 2.90
328 330 0.758734 TAGGGGCAATGATCAGTCCG 59.241 55.000 0.09 0.00 0.00 4.79
335 337 4.439057 GGCAATGATCAGTCCGTTAGTTA 58.561 43.478 0.09 0.00 0.00 2.24
394 1027 0.466963 AAAAGTGGGTCCGTTCGACT 59.533 50.000 0.00 0.00 41.64 4.18
406 1039 5.446875 GGTCCGTTCGACTGAATAAAATTCC 60.447 44.000 0.00 0.00 41.64 3.01
409 1042 6.428771 TCCGTTCGACTGAATAAAATTCCTTT 59.571 34.615 0.00 0.00 36.29 3.11
410 1043 7.040961 TCCGTTCGACTGAATAAAATTCCTTTT 60.041 33.333 0.00 0.00 38.17 2.27
411 1044 7.593644 CCGTTCGACTGAATAAAATTCCTTTTT 59.406 33.333 0.00 0.00 40.59 1.94
441 1133 2.620112 GGGGCAATGATCATCCGCG 61.620 63.158 18.67 0.00 0.00 6.46
456 1148 9.981114 TGATCATCCGCGAATAATATATTATGT 57.019 29.630 16.89 8.66 33.51 2.29
509 1201 2.442212 TCAAGCGAACGGTGATAACA 57.558 45.000 0.00 0.00 0.00 2.41
511 1203 1.393539 CAAGCGAACGGTGATAACAGG 59.606 52.381 0.00 0.00 0.00 4.00
614 1306 1.886542 ACGAAAGCATGGAAAAGTCCC 59.113 47.619 0.00 0.00 44.23 4.46
615 1307 1.202348 CGAAAGCATGGAAAAGTCCCC 59.798 52.381 0.00 0.00 44.23 4.81
616 1308 1.550524 GAAAGCATGGAAAAGTCCCCC 59.449 52.381 0.00 0.00 44.23 5.40
811 1551 7.597386 ACCTGGTTCGTTAGTTAGTTAGTTAG 58.403 38.462 0.00 0.00 0.00 2.34
812 1552 7.231519 ACCTGGTTCGTTAGTTAGTTAGTTAGT 59.768 37.037 0.00 0.00 0.00 2.24
813 1553 8.084684 CCTGGTTCGTTAGTTAGTTAGTTAGTT 58.915 37.037 0.00 0.00 0.00 2.24
900 1650 4.312231 GTGCAAACGCTCGCAGCA 62.312 61.111 8.52 0.00 42.58 4.41
910 1670 1.023513 GCTCGCAGCATCCTCTGTTT 61.024 55.000 0.00 0.00 41.89 2.83
911 1671 1.005340 CTCGCAGCATCCTCTGTTTC 58.995 55.000 0.00 0.00 36.49 2.78
913 1673 1.699656 CGCAGCATCCTCTGTTTCGG 61.700 60.000 0.00 0.00 36.49 4.30
915 1675 1.813513 CAGCATCCTCTGTTTCGGTT 58.186 50.000 0.00 0.00 0.00 4.44
922 1687 1.063806 CTCTGTTTCGGTTCTGCTCG 58.936 55.000 0.00 0.00 0.00 5.03
957 1726 0.321653 AACCAGGTGCGCTCTTTAGG 60.322 55.000 9.73 8.54 0.00 2.69
1047 1840 3.863407 GGACAAGATCCCACTGGTC 57.137 57.895 0.00 0.00 42.46 4.02
1518 2326 1.796749 GTCGGACGAAGCTGACGAC 60.797 63.158 18.04 14.45 45.42 4.34
1521 2329 0.732880 CGGACGAAGCTGACGACATT 60.733 55.000 18.04 0.00 34.70 2.71
1791 2612 5.047943 ACTCGCTCACTAGTCACTTTGTTAT 60.048 40.000 0.00 0.00 0.00 1.89
1792 2613 5.779922 TCGCTCACTAGTCACTTTGTTATT 58.220 37.500 0.00 0.00 0.00 1.40
1794 2615 5.220043 CGCTCACTAGTCACTTTGTTATTCG 60.220 44.000 0.00 0.00 0.00 3.34
1797 2618 5.986741 TCACTAGTCACTTTGTTATTCGCAA 59.013 36.000 0.00 0.00 0.00 4.85
1963 2919 0.968901 CCCTACCACCTGTGCGTCTA 60.969 60.000 0.00 0.00 0.00 2.59
1964 2920 0.172803 CCTACCACCTGTGCGTCTAC 59.827 60.000 0.00 0.00 0.00 2.59
1965 2921 1.174783 CTACCACCTGTGCGTCTACT 58.825 55.000 0.00 0.00 0.00 2.57
1966 2922 2.362736 CTACCACCTGTGCGTCTACTA 58.637 52.381 0.00 0.00 0.00 1.82
1967 2923 1.174783 ACCACCTGTGCGTCTACTAG 58.825 55.000 0.00 0.00 0.00 2.57
1968 2924 0.179134 CCACCTGTGCGTCTACTAGC 60.179 60.000 0.00 0.00 0.00 3.42
1969 2925 0.811915 CACCTGTGCGTCTACTAGCT 59.188 55.000 0.00 0.00 0.00 3.32
1970 2926 2.014857 CACCTGTGCGTCTACTAGCTA 58.985 52.381 0.00 0.00 0.00 3.32
1971 2927 2.015587 ACCTGTGCGTCTACTAGCTAC 58.984 52.381 0.00 0.00 0.00 3.58
1972 2928 2.290464 CCTGTGCGTCTACTAGCTACT 58.710 52.381 0.00 0.00 0.00 2.57
1973 2929 2.288458 CCTGTGCGTCTACTAGCTACTC 59.712 54.545 0.00 0.00 0.00 2.59
1974 2930 2.937149 CTGTGCGTCTACTAGCTACTCA 59.063 50.000 0.00 0.00 0.00 3.41
1975 2931 2.676839 TGTGCGTCTACTAGCTACTCAC 59.323 50.000 0.71 0.71 31.25 3.51
1976 2932 2.937799 GTGCGTCTACTAGCTACTCACT 59.062 50.000 0.00 0.00 0.00 3.41
1977 2933 2.937149 TGCGTCTACTAGCTACTCACTG 59.063 50.000 0.00 0.00 0.00 3.66
2037 3073 4.941309 ACCAACGGGCGGTTCCAC 62.941 66.667 7.54 0.00 36.49 4.02
2205 3247 0.323629 CCTGGGCCGAGTACAAGAAA 59.676 55.000 14.30 0.00 0.00 2.52
2263 3305 1.687493 CCCTTCGAGCTCTTCCCCT 60.687 63.158 12.85 0.00 0.00 4.79
2383 3462 9.268268 TGTTTACTAATTAATCCATCGATCCAC 57.732 33.333 0.00 0.00 0.00 4.02
2390 3469 8.868522 AATTAATCCATCGATCCACACATATT 57.131 30.769 0.00 0.00 0.00 1.28
2391 3470 8.868522 ATTAATCCATCGATCCACACATATTT 57.131 30.769 0.00 0.00 0.00 1.40
2414 3493 2.359848 GGTAACAAAAAGAAGTGGGCGT 59.640 45.455 0.00 0.00 0.00 5.68
2416 3495 3.982576 AACAAAAAGAAGTGGGCGTAG 57.017 42.857 0.00 0.00 0.00 3.51
2418 3497 3.284617 ACAAAAAGAAGTGGGCGTAGTT 58.715 40.909 0.00 0.00 0.00 2.24
2421 3500 2.165319 AAGAAGTGGGCGTAGTTGTC 57.835 50.000 0.00 0.00 0.00 3.18
2545 3628 4.720649 TTTCCACTAGTAGTAGCAGCAG 57.279 45.455 1.57 0.00 0.00 4.24
2546 3629 2.025155 TCCACTAGTAGTAGCAGCAGC 58.975 52.381 1.57 0.00 42.56 5.25
2547 3630 1.751351 CCACTAGTAGTAGCAGCAGCA 59.249 52.381 3.17 0.00 45.49 4.41
2548 3631 2.166459 CCACTAGTAGTAGCAGCAGCAA 59.834 50.000 3.17 0.00 45.49 3.91
2549 3632 3.181471 CCACTAGTAGTAGCAGCAGCAAT 60.181 47.826 3.17 0.00 45.49 3.56
2599 3682 0.827368 TGTTGTCCCCTTTTGTTGGC 59.173 50.000 0.00 0.00 0.00 4.52
2715 3798 3.762288 ACTGTGTTCTCGAGTATGGCTTA 59.238 43.478 13.13 0.00 0.00 3.09
2740 3823 4.219033 CGTACAAACTGAATGCAAAGTCC 58.781 43.478 0.00 0.00 0.00 3.85
2756 3839 4.383602 CCGTTGAAACCCGCAGCG 62.384 66.667 8.18 8.18 39.25 5.18
2782 3865 2.442272 GTCCGGGCAGCTCTCCTA 60.442 66.667 0.00 0.00 0.00 2.94
2804 3904 3.243434 ACATCGAACATCCAGACGTATCC 60.243 47.826 0.00 0.00 0.00 2.59
2805 3905 1.332686 TCGAACATCCAGACGTATCCG 59.667 52.381 0.00 0.00 40.83 4.18
2820 3920 2.457366 ATCCGGACACAGTTTCTCAC 57.543 50.000 6.12 0.00 0.00 3.51
2889 3989 1.374125 GGCAAACCGGATGCAAACC 60.374 57.895 28.86 14.22 45.60 3.27
2923 4023 4.552365 CATCCGGACCGCTGCCAT 62.552 66.667 6.12 0.00 0.00 4.40
2924 4024 2.842462 ATCCGGACCGCTGCCATA 60.842 61.111 6.12 0.00 0.00 2.74
2929 4029 0.037326 CGGACCGCTGCCATATATGT 60.037 55.000 11.73 0.00 0.00 2.29
2930 4030 1.608025 CGGACCGCTGCCATATATGTT 60.608 52.381 11.73 0.00 0.00 2.71
2933 4033 2.143122 ACCGCTGCCATATATGTTTCG 58.857 47.619 11.73 8.85 0.00 3.46
2935 4035 1.135972 CGCTGCCATATATGTTTCGGC 60.136 52.381 11.73 13.88 43.28 5.54
2953 4617 1.079819 CAGACGTGGGACGAGCAAT 60.080 57.895 2.62 0.00 46.05 3.56
3006 4670 3.561725 GGTCGATGGAAGGCAAAATCTAG 59.438 47.826 0.00 0.00 0.00 2.43
3017 4681 1.327764 CAAAATCTAGGCCGAGTTCGC 59.672 52.381 13.04 0.00 38.18 4.70
3018 4682 0.527817 AAATCTAGGCCGAGTTCGCG 60.528 55.000 13.04 0.00 38.18 5.87
3019 4683 1.381928 AATCTAGGCCGAGTTCGCGA 61.382 55.000 13.04 3.71 38.18 5.87
3020 4684 1.787057 ATCTAGGCCGAGTTCGCGAG 61.787 60.000 9.59 0.00 38.18 5.03
3021 4685 4.189188 TAGGCCGAGTTCGCGAGC 62.189 66.667 15.76 15.76 38.18 5.03
3025 4689 4.116328 CCGAGTTCGCGAGCTGGA 62.116 66.667 30.68 4.84 38.18 3.86
3026 4690 2.126463 CGAGTTCGCGAGCTGGAA 60.126 61.111 30.57 0.00 0.00 3.53
3027 4691 2.437343 CGAGTTCGCGAGCTGGAAC 61.437 63.158 30.57 14.37 42.15 3.62
3028 4692 3.052081 AGTTCGCGAGCTGGAACT 58.948 55.556 25.21 13.90 45.89 3.01
3029 4693 3.464628 GTTCGCGAGCTGGAACTC 58.535 61.111 16.26 0.00 39.48 3.01
3030 4694 1.372997 GTTCGCGAGCTGGAACTCA 60.373 57.895 16.26 0.00 39.48 3.41
3031 4695 0.944311 GTTCGCGAGCTGGAACTCAA 60.944 55.000 16.26 0.00 39.48 3.02
3032 4696 0.944311 TTCGCGAGCTGGAACTCAAC 60.944 55.000 9.59 0.00 36.42 3.18
3033 4697 1.664649 CGCGAGCTGGAACTCAACA 60.665 57.895 0.00 0.00 36.42 3.33
3034 4698 1.016130 CGCGAGCTGGAACTCAACAT 61.016 55.000 0.00 0.00 36.42 2.71
3035 4699 0.445436 GCGAGCTGGAACTCAACATG 59.555 55.000 0.00 0.00 36.42 3.21
3036 4700 0.445436 CGAGCTGGAACTCAACATGC 59.555 55.000 0.00 0.00 36.42 4.06
3037 4701 1.527034 GAGCTGGAACTCAACATGCA 58.473 50.000 0.00 0.00 36.65 3.96
3038 4702 2.089980 GAGCTGGAACTCAACATGCAT 58.910 47.619 0.00 0.00 36.65 3.96
3039 4703 1.816835 AGCTGGAACTCAACATGCATG 59.183 47.619 25.09 25.09 0.00 4.06
3040 4704 1.135199 GCTGGAACTCAACATGCATGG 60.135 52.381 29.41 14.61 0.00 3.66
3041 4705 2.439409 CTGGAACTCAACATGCATGGA 58.561 47.619 29.41 17.06 0.00 3.41
3042 4706 2.161855 TGGAACTCAACATGCATGGAC 58.838 47.619 29.41 12.12 0.00 4.02
3043 4707 2.161855 GGAACTCAACATGCATGGACA 58.838 47.619 29.41 11.95 0.00 4.02
3044 4708 2.557924 GGAACTCAACATGCATGGACAA 59.442 45.455 29.41 11.63 0.00 3.18
3045 4709 3.366679 GGAACTCAACATGCATGGACAAG 60.367 47.826 29.41 21.15 0.00 3.16
3046 4710 2.165167 ACTCAACATGCATGGACAAGG 58.835 47.619 29.41 15.97 0.00 3.61
3047 4711 2.224843 ACTCAACATGCATGGACAAGGA 60.225 45.455 29.41 15.42 0.00 3.36
3048 4712 2.422479 CTCAACATGCATGGACAAGGAG 59.578 50.000 29.41 19.87 0.00 3.69
3049 4713 2.040145 TCAACATGCATGGACAAGGAGA 59.960 45.455 29.41 12.27 0.00 3.71
3050 4714 2.821378 CAACATGCATGGACAAGGAGAA 59.179 45.455 29.41 0.00 0.00 2.87
3051 4715 2.440409 ACATGCATGGACAAGGAGAAC 58.560 47.619 29.41 0.00 0.00 3.01
3052 4716 2.224843 ACATGCATGGACAAGGAGAACA 60.225 45.455 29.41 0.00 0.00 3.18
3053 4717 2.885135 TGCATGGACAAGGAGAACAT 57.115 45.000 0.00 0.00 0.00 2.71
3054 4718 3.998913 TGCATGGACAAGGAGAACATA 57.001 42.857 0.00 0.00 0.00 2.29
3055 4719 4.299586 TGCATGGACAAGGAGAACATAA 57.700 40.909 0.00 0.00 0.00 1.90
3056 4720 4.661222 TGCATGGACAAGGAGAACATAAA 58.339 39.130 0.00 0.00 0.00 1.40
3057 4721 4.458989 TGCATGGACAAGGAGAACATAAAC 59.541 41.667 0.00 0.00 0.00 2.01
3058 4722 4.702131 GCATGGACAAGGAGAACATAAACT 59.298 41.667 0.00 0.00 0.00 2.66
3059 4723 5.183904 GCATGGACAAGGAGAACATAAACTT 59.816 40.000 0.00 0.00 0.00 2.66
3060 4724 6.294731 GCATGGACAAGGAGAACATAAACTTT 60.295 38.462 0.00 0.00 0.00 2.66
3061 4725 6.633500 TGGACAAGGAGAACATAAACTTTG 57.367 37.500 0.00 0.00 0.00 2.77
3062 4726 6.126409 TGGACAAGGAGAACATAAACTTTGT 58.874 36.000 0.00 0.00 35.81 2.83
3063 4727 6.262273 TGGACAAGGAGAACATAAACTTTGTC 59.738 38.462 0.00 0.00 43.48 3.18
3064 4728 6.300354 ACAAGGAGAACATAAACTTTGTCG 57.700 37.500 0.00 0.00 29.25 4.35
3065 4729 6.053005 ACAAGGAGAACATAAACTTTGTCGA 58.947 36.000 0.00 0.00 29.25 4.20
3066 4730 6.202954 ACAAGGAGAACATAAACTTTGTCGAG 59.797 38.462 0.00 0.00 29.25 4.04
3067 4731 4.691216 AGGAGAACATAAACTTTGTCGAGC 59.309 41.667 0.00 0.00 0.00 5.03
3068 4732 4.451096 GGAGAACATAAACTTTGTCGAGCA 59.549 41.667 0.00 0.00 0.00 4.26
3069 4733 5.389935 GGAGAACATAAACTTTGTCGAGCAG 60.390 44.000 0.00 0.00 0.00 4.24
3070 4734 3.813529 ACATAAACTTTGTCGAGCAGC 57.186 42.857 0.00 0.00 0.00 5.25
3071 4735 3.138304 ACATAAACTTTGTCGAGCAGCA 58.862 40.909 0.00 0.00 0.00 4.41
3072 4736 3.187227 ACATAAACTTTGTCGAGCAGCAG 59.813 43.478 0.00 0.00 0.00 4.24
3073 4737 0.308993 AAACTTTGTCGAGCAGCAGC 59.691 50.000 0.00 0.00 42.56 5.25
3089 4753 4.874977 GCGGGTGCTCTACGAGGC 62.875 72.222 7.41 0.00 38.39 4.70
3090 4754 4.208686 CGGGTGCTCTACGAGGCC 62.209 72.222 0.00 0.00 0.00 5.19
3091 4755 4.208686 GGGTGCTCTACGAGGCCG 62.209 72.222 0.00 0.00 42.50 6.13
3092 4756 4.874977 GGTGCTCTACGAGGCCGC 62.875 72.222 0.00 0.00 39.95 6.53
3117 4781 2.795121 GCACTCATGCGACAAAGTAG 57.205 50.000 0.00 0.00 43.33 2.57
3118 4782 1.394917 GCACTCATGCGACAAAGTAGG 59.605 52.381 0.00 0.00 43.33 3.18
3119 4783 2.930887 GCACTCATGCGACAAAGTAGGA 60.931 50.000 0.00 0.00 43.33 2.94
3120 4784 2.668457 CACTCATGCGACAAAGTAGGAC 59.332 50.000 0.00 0.00 0.00 3.85
3121 4785 1.920574 CTCATGCGACAAAGTAGGACG 59.079 52.381 0.00 0.00 0.00 4.79
3123 4787 3.070060 GCGACAAAGTAGGACGCG 58.930 61.111 3.53 3.53 39.90 6.01
3124 4788 3.067846 GCGACAAAGTAGGACGCGC 62.068 63.158 5.73 0.00 39.90 6.86
3125 4789 1.731613 CGACAAAGTAGGACGCGCA 60.732 57.895 5.73 0.00 0.00 6.09
3126 4790 1.674611 CGACAAAGTAGGACGCGCAG 61.675 60.000 5.73 2.42 0.00 5.18
3127 4791 1.352156 GACAAAGTAGGACGCGCAGG 61.352 60.000 5.73 0.00 0.00 4.85
3128 4792 2.434359 AAAGTAGGACGCGCAGGC 60.434 61.111 5.73 1.57 0.00 4.85
3148 4812 2.203167 CGCTGATGAGCAGGCCAT 60.203 61.111 5.01 0.00 46.62 4.40
3149 4813 2.252346 CGCTGATGAGCAGGCCATC 61.252 63.158 5.01 12.76 46.62 3.51
3150 4814 1.153025 GCTGATGAGCAGGCCATCA 60.153 57.895 5.01 18.07 45.58 3.07
3151 4815 1.445716 GCTGATGAGCAGGCCATCAC 61.446 60.000 5.01 11.81 43.67 3.06
3152 4816 1.153309 TGATGAGCAGGCCATCACG 60.153 57.895 5.01 0.00 43.67 4.35
3153 4817 1.890979 GATGAGCAGGCCATCACGG 60.891 63.158 5.01 0.00 39.98 4.94
3154 4818 2.315781 GATGAGCAGGCCATCACGGA 62.316 60.000 5.01 0.00 39.98 4.69
3160 4824 4.713946 GGCCATCACGGACAAGAA 57.286 55.556 0.00 0.00 45.64 2.52
3161 4825 2.171635 GGCCATCACGGACAAGAAC 58.828 57.895 0.00 0.00 45.64 3.01
3162 4826 0.605319 GGCCATCACGGACAAGAACA 60.605 55.000 0.00 0.00 45.64 3.18
3163 4827 0.517316 GCCATCACGGACAAGAACAC 59.483 55.000 0.00 0.00 36.56 3.32
3164 4828 1.878102 GCCATCACGGACAAGAACACT 60.878 52.381 0.00 0.00 36.56 3.55
3165 4829 1.800586 CCATCACGGACAAGAACACTG 59.199 52.381 0.00 0.00 36.56 3.66
3166 4830 2.547855 CCATCACGGACAAGAACACTGA 60.548 50.000 0.00 0.00 36.56 3.41
3167 4831 2.218953 TCACGGACAAGAACACTGAC 57.781 50.000 0.00 0.00 0.00 3.51
3168 4832 1.478916 TCACGGACAAGAACACTGACA 59.521 47.619 0.00 0.00 0.00 3.58
3169 4833 1.860950 CACGGACAAGAACACTGACAG 59.139 52.381 0.00 0.00 0.00 3.51
3170 4834 0.861837 CGGACAAGAACACTGACAGC 59.138 55.000 1.25 0.00 0.00 4.40
3171 4835 1.539065 CGGACAAGAACACTGACAGCT 60.539 52.381 1.25 0.00 0.00 4.24
3172 4836 2.139118 GGACAAGAACACTGACAGCTC 58.861 52.381 1.25 0.00 0.00 4.09
3173 4837 2.139118 GACAAGAACACTGACAGCTCC 58.861 52.381 1.25 0.00 0.00 4.70
3174 4838 1.143305 CAAGAACACTGACAGCTCCG 58.857 55.000 1.25 0.00 0.00 4.63
3175 4839 0.601311 AAGAACACTGACAGCTCCGC 60.601 55.000 1.25 0.00 0.00 5.54
3176 4840 2.356313 AACACTGACAGCTCCGCG 60.356 61.111 1.25 0.00 0.00 6.46
3177 4841 3.151958 AACACTGACAGCTCCGCGT 62.152 57.895 4.92 0.00 0.00 6.01
3178 4842 2.807045 CACTGACAGCTCCGCGTC 60.807 66.667 4.92 0.00 34.56 5.19
3179 4843 4.406173 ACTGACAGCTCCGCGTCG 62.406 66.667 4.92 0.00 35.86 5.12
3180 4844 4.406173 CTGACAGCTCCGCGTCGT 62.406 66.667 4.92 0.00 35.86 4.34
3181 4845 3.898627 CTGACAGCTCCGCGTCGTT 62.899 63.158 4.92 0.00 35.86 3.85
3182 4846 3.470567 GACAGCTCCGCGTCGTTG 61.471 66.667 4.92 6.26 0.00 4.10
3183 4847 3.891586 GACAGCTCCGCGTCGTTGA 62.892 63.158 4.92 0.00 0.00 3.18
3184 4848 3.470567 CAGCTCCGCGTCGTTGAC 61.471 66.667 4.92 0.00 0.00 3.18
3185 4849 3.973516 AGCTCCGCGTCGTTGACA 61.974 61.111 4.92 0.00 32.09 3.58
3186 4850 3.764049 GCTCCGCGTCGTTGACAC 61.764 66.667 4.92 0.00 32.09 3.67
3187 4851 3.103911 CTCCGCGTCGTTGACACC 61.104 66.667 4.92 0.00 32.09 4.16
3188 4852 3.834447 CTCCGCGTCGTTGACACCA 62.834 63.158 4.92 0.00 32.09 4.17
3189 4853 3.403057 CCGCGTCGTTGACACCAG 61.403 66.667 4.92 0.00 32.09 4.00
3190 4854 4.059459 CGCGTCGTTGACACCAGC 62.059 66.667 0.00 0.00 32.09 4.85
3191 4855 2.964925 GCGTCGTTGACACCAGCA 60.965 61.111 0.00 0.00 32.09 4.41
3192 4856 2.943345 GCGTCGTTGACACCAGCAG 61.943 63.158 0.00 0.00 32.09 4.24
3193 4857 2.939022 GTCGTTGACACCAGCAGC 59.061 61.111 0.00 0.00 32.09 5.25
3194 4858 1.595382 GTCGTTGACACCAGCAGCT 60.595 57.895 0.00 0.00 32.09 4.24
3195 4859 1.595109 TCGTTGACACCAGCAGCTG 60.595 57.895 16.23 16.23 0.00 4.24
3196 4860 2.641559 GTTGACACCAGCAGCTGC 59.358 61.111 31.53 31.53 42.49 5.25
3206 4870 2.781300 GCAGCTGCTCGTAGTTGC 59.219 61.111 31.33 7.91 45.29 4.17
3207 4871 2.744768 GCAGCTGCTCGTAGTTGCC 61.745 63.158 31.33 0.00 45.57 4.52
3208 4872 1.374631 CAGCTGCTCGTAGTTGCCA 60.375 57.895 0.00 0.00 0.00 4.92
3209 4873 1.374758 AGCTGCTCGTAGTTGCCAC 60.375 57.895 0.00 0.00 0.00 5.01
3210 4874 2.391389 GCTGCTCGTAGTTGCCACC 61.391 63.158 0.00 0.00 0.00 4.61
3211 4875 1.005037 CTGCTCGTAGTTGCCACCA 60.005 57.895 0.00 0.00 0.00 4.17
3212 4876 1.291877 CTGCTCGTAGTTGCCACCAC 61.292 60.000 0.00 0.00 0.00 4.16
3213 4877 1.301401 GCTCGTAGTTGCCACCACA 60.301 57.895 0.00 0.00 0.00 4.17
3214 4878 0.882927 GCTCGTAGTTGCCACCACAA 60.883 55.000 0.00 0.00 0.00 3.33
3219 4883 2.719354 GTTGCCACCACAACGACC 59.281 61.111 0.00 0.00 40.45 4.79
3220 4884 2.115911 GTTGCCACCACAACGACCA 61.116 57.895 0.00 0.00 40.45 4.02
3221 4885 1.152860 TTGCCACCACAACGACCAT 60.153 52.632 0.00 0.00 0.00 3.55
3222 4886 1.451337 TTGCCACCACAACGACCATG 61.451 55.000 0.00 0.00 0.00 3.66
3223 4887 1.599518 GCCACCACAACGACCATGA 60.600 57.895 0.00 0.00 0.00 3.07
3224 4888 1.577328 GCCACCACAACGACCATGAG 61.577 60.000 0.00 0.00 0.00 2.90
3225 4889 0.955428 CCACCACAACGACCATGAGG 60.955 60.000 0.00 0.00 42.21 3.86
3235 4899 2.438434 CCATGAGGTTGGCCCGTC 60.438 66.667 0.00 0.00 38.74 4.79
3236 4900 2.819595 CATGAGGTTGGCCCGTCG 60.820 66.667 0.00 0.00 38.74 5.12
3237 4901 3.000819 ATGAGGTTGGCCCGTCGA 61.001 61.111 0.00 0.00 38.74 4.20
3238 4902 3.310860 ATGAGGTTGGCCCGTCGAC 62.311 63.158 5.18 5.18 38.74 4.20
3245 4909 4.867599 GGCCCGTCGACGTCCATC 62.868 72.222 33.49 17.70 37.74 3.51
3246 4910 4.124351 GCCCGTCGACGTCCATCA 62.124 66.667 33.49 0.00 37.74 3.07
3247 4911 2.805546 CCCGTCGACGTCCATCAT 59.194 61.111 33.49 0.00 37.74 2.45
3248 4912 1.588932 CCCGTCGACGTCCATCATG 60.589 63.158 33.49 16.97 37.74 3.07
3249 4913 1.588932 CCGTCGACGTCCATCATGG 60.589 63.158 33.49 13.35 36.16 3.66
3250 4914 1.431845 CGTCGACGTCCATCATGGA 59.568 57.895 29.08 0.66 45.98 3.41
3259 4923 2.252535 TCCATCATGGACCTCACTCA 57.747 50.000 0.66 0.00 42.67 3.41
3260 4924 2.550175 TCCATCATGGACCTCACTCAA 58.450 47.619 0.66 0.00 42.67 3.02
3261 4925 2.237143 TCCATCATGGACCTCACTCAAC 59.763 50.000 0.66 0.00 42.67 3.18
3262 4926 2.636830 CATCATGGACCTCACTCAACC 58.363 52.381 0.00 0.00 0.00 3.77
3263 4927 0.608130 TCATGGACCTCACTCAACCG 59.392 55.000 0.00 0.00 0.00 4.44
3264 4928 0.608130 CATGGACCTCACTCAACCGA 59.392 55.000 0.00 0.00 0.00 4.69
3265 4929 1.208052 CATGGACCTCACTCAACCGAT 59.792 52.381 0.00 0.00 0.00 4.18
3266 4930 0.608130 TGGACCTCACTCAACCGATG 59.392 55.000 0.00 0.00 0.00 3.84
3267 4931 0.895530 GGACCTCACTCAACCGATGA 59.104 55.000 0.00 0.00 36.38 2.92
3268 4932 1.482593 GGACCTCACTCAACCGATGAT 59.517 52.381 0.00 0.00 37.44 2.45
3269 4933 2.693591 GGACCTCACTCAACCGATGATA 59.306 50.000 0.00 0.00 37.44 2.15
3270 4934 3.322254 GGACCTCACTCAACCGATGATAT 59.678 47.826 0.00 0.00 37.44 1.63
3271 4935 4.551388 GACCTCACTCAACCGATGATATC 58.449 47.826 0.00 0.00 37.44 1.63
3272 4936 3.322254 ACCTCACTCAACCGATGATATCC 59.678 47.826 0.00 0.00 37.44 2.59
3273 4937 3.321968 CCTCACTCAACCGATGATATCCA 59.678 47.826 0.00 0.00 37.44 3.41
3274 4938 4.554292 CTCACTCAACCGATGATATCCAG 58.446 47.826 0.00 0.00 37.44 3.86
3275 4939 3.321968 TCACTCAACCGATGATATCCAGG 59.678 47.826 0.00 3.62 37.44 4.45
3276 4940 2.037772 ACTCAACCGATGATATCCAGGC 59.962 50.000 0.00 0.00 37.44 4.85
3277 4941 2.301296 CTCAACCGATGATATCCAGGCT 59.699 50.000 0.00 0.00 37.44 4.58
3278 4942 2.037641 TCAACCGATGATATCCAGGCTG 59.962 50.000 7.75 7.75 31.50 4.85
3279 4943 0.322975 ACCGATGATATCCAGGCTGC 59.677 55.000 9.56 0.00 0.00 5.25
3280 4944 0.738762 CCGATGATATCCAGGCTGCG 60.739 60.000 9.56 4.40 0.00 5.18
3281 4945 0.738762 CGATGATATCCAGGCTGCGG 60.739 60.000 9.56 0.00 0.00 5.69
3282 4946 0.610174 GATGATATCCAGGCTGCGGA 59.390 55.000 9.56 1.79 36.84 5.54
3283 4947 0.322975 ATGATATCCAGGCTGCGGAC 59.677 55.000 9.56 0.00 34.69 4.79
3284 4948 0.760567 TGATATCCAGGCTGCGGACT 60.761 55.000 9.56 0.00 34.69 3.85
3285 4949 1.257743 GATATCCAGGCTGCGGACTA 58.742 55.000 9.56 0.00 34.69 2.59
3286 4950 0.969894 ATATCCAGGCTGCGGACTAC 59.030 55.000 9.56 0.00 34.69 2.73
3302 4966 5.885020 GGACTACGACGAGGAAAATTATG 57.115 43.478 0.00 0.00 0.00 1.90
3303 4967 4.208666 GGACTACGACGAGGAAAATTATGC 59.791 45.833 0.00 0.00 0.00 3.14
3304 4968 4.117685 ACTACGACGAGGAAAATTATGCC 58.882 43.478 0.00 0.00 0.00 4.40
3305 4969 2.980568 ACGACGAGGAAAATTATGCCA 58.019 42.857 0.00 0.00 0.00 4.92
3306 4970 3.541632 ACGACGAGGAAAATTATGCCAT 58.458 40.909 0.00 0.00 0.00 4.40
3307 4971 3.312421 ACGACGAGGAAAATTATGCCATG 59.688 43.478 0.00 0.00 0.00 3.66
3308 4972 3.303990 CGACGAGGAAAATTATGCCATGG 60.304 47.826 7.63 7.63 0.00 3.66
3309 4973 2.958355 ACGAGGAAAATTATGCCATGGG 59.042 45.455 15.13 0.00 0.00 4.00
3310 4974 3.221771 CGAGGAAAATTATGCCATGGGA 58.778 45.455 15.13 12.25 0.00 4.37
3311 4975 3.636300 CGAGGAAAATTATGCCATGGGAA 59.364 43.478 11.10 0.00 0.00 3.97
3312 4976 4.099266 CGAGGAAAATTATGCCATGGGAAA 59.901 41.667 11.10 6.68 0.00 3.13
3313 4977 5.395103 CGAGGAAAATTATGCCATGGGAAAA 60.395 40.000 11.10 0.00 0.00 2.29
3314 4978 5.993055 AGGAAAATTATGCCATGGGAAAAG 58.007 37.500 11.10 0.00 0.00 2.27
3315 4979 5.725822 AGGAAAATTATGCCATGGGAAAAGA 59.274 36.000 11.10 0.00 0.00 2.52
3316 4980 6.387807 AGGAAAATTATGCCATGGGAAAAGAT 59.612 34.615 11.10 0.00 0.00 2.40
3317 4981 6.484308 GGAAAATTATGCCATGGGAAAAGATG 59.516 38.462 11.10 0.00 0.00 2.90
3318 4982 5.556006 AATTATGCCATGGGAAAAGATGG 57.444 39.130 11.10 0.00 41.95 3.51
3322 4986 0.826062 CCATGGGAAAAGATGGCACC 59.174 55.000 2.85 0.00 33.01 5.01
3323 4987 1.620524 CCATGGGAAAAGATGGCACCT 60.621 52.381 2.85 0.00 33.01 4.00
3324 4988 1.753073 CATGGGAAAAGATGGCACCTC 59.247 52.381 0.00 0.00 0.00 3.85
3325 4989 0.776810 TGGGAAAAGATGGCACCTCA 59.223 50.000 0.00 0.00 0.00 3.86
3326 4990 1.358787 TGGGAAAAGATGGCACCTCAT 59.641 47.619 0.00 0.00 0.00 2.90
3327 4991 1.753073 GGGAAAAGATGGCACCTCATG 59.247 52.381 0.00 0.00 0.00 3.07
3328 4992 2.450476 GGAAAAGATGGCACCTCATGT 58.550 47.619 0.00 0.00 0.00 3.21
3329 4993 2.424956 GGAAAAGATGGCACCTCATGTC 59.575 50.000 0.00 0.00 0.00 3.06
3330 4994 2.134789 AAAGATGGCACCTCATGTCC 57.865 50.000 0.00 0.00 28.68 4.02
3331 4995 0.257039 AAGATGGCACCTCATGTCCC 59.743 55.000 0.00 0.00 28.68 4.46
3332 4996 0.622738 AGATGGCACCTCATGTCCCT 60.623 55.000 0.00 0.00 28.68 4.20
3333 4997 0.179034 GATGGCACCTCATGTCCCTC 60.179 60.000 0.00 0.00 28.68 4.30
3334 4998 1.976132 ATGGCACCTCATGTCCCTCG 61.976 60.000 0.00 0.00 28.68 4.63
3335 4999 2.660064 GGCACCTCATGTCCCTCGT 61.660 63.158 0.00 0.00 0.00 4.18
3336 5000 1.448540 GCACCTCATGTCCCTCGTG 60.449 63.158 0.00 0.00 34.61 4.35
3337 5001 1.219124 CACCTCATGTCCCTCGTGG 59.781 63.158 0.00 0.00 34.14 4.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 6.262273 AGAATGAGCTTTACCAGTTCGAAAAA 59.738 34.615 0.00 0.00 35.49 1.94
23 24 5.763204 AGAATGAGCTTTACCAGTTCGAAAA 59.237 36.000 0.00 0.00 35.49 2.29
24 25 5.305585 AGAATGAGCTTTACCAGTTCGAAA 58.694 37.500 0.00 0.00 35.49 3.46
25 26 4.894784 AGAATGAGCTTTACCAGTTCGAA 58.105 39.130 0.00 0.00 35.49 3.71
26 27 4.537135 AGAATGAGCTTTACCAGTTCGA 57.463 40.909 0.00 0.00 35.49 3.71
27 28 6.910536 ATTAGAATGAGCTTTACCAGTTCG 57.089 37.500 0.00 0.00 35.49 3.95
28 29 9.162764 TGTAATTAGAATGAGCTTTACCAGTTC 57.837 33.333 0.00 0.00 33.33 3.01
29 30 9.515226 TTGTAATTAGAATGAGCTTTACCAGTT 57.485 29.630 0.00 0.00 0.00 3.16
30 31 9.686683 ATTGTAATTAGAATGAGCTTTACCAGT 57.313 29.630 7.03 0.00 0.00 4.00
31 32 9.941664 CATTGTAATTAGAATGAGCTTTACCAG 57.058 33.333 24.14 0.00 38.74 4.00
32 33 9.679661 TCATTGTAATTAGAATGAGCTTTACCA 57.320 29.630 26.02 8.18 39.92 3.25
52 53 9.778993 CATTCGTCATCTTATTTTTCTCATTGT 57.221 29.630 0.00 0.00 0.00 2.71
53 54 9.229784 CCATTCGTCATCTTATTTTTCTCATTG 57.770 33.333 0.00 0.00 0.00 2.82
54 55 8.408601 CCCATTCGTCATCTTATTTTTCTCATT 58.591 33.333 0.00 0.00 0.00 2.57
55 56 7.557719 ACCCATTCGTCATCTTATTTTTCTCAT 59.442 33.333 0.00 0.00 0.00 2.90
56 57 6.884295 ACCCATTCGTCATCTTATTTTTCTCA 59.116 34.615 0.00 0.00 0.00 3.27
57 58 7.321745 ACCCATTCGTCATCTTATTTTTCTC 57.678 36.000 0.00 0.00 0.00 2.87
58 59 7.012421 GCTACCCATTCGTCATCTTATTTTTCT 59.988 37.037 0.00 0.00 0.00 2.52
59 60 7.132863 GCTACCCATTCGTCATCTTATTTTTC 58.867 38.462 0.00 0.00 0.00 2.29
60 61 6.039382 GGCTACCCATTCGTCATCTTATTTTT 59.961 38.462 0.00 0.00 0.00 1.94
61 62 5.531287 GGCTACCCATTCGTCATCTTATTTT 59.469 40.000 0.00 0.00 0.00 1.82
62 63 5.063880 GGCTACCCATTCGTCATCTTATTT 58.936 41.667 0.00 0.00 0.00 1.40
63 64 4.348168 AGGCTACCCATTCGTCATCTTATT 59.652 41.667 0.00 0.00 0.00 1.40
64 65 3.904339 AGGCTACCCATTCGTCATCTTAT 59.096 43.478 0.00 0.00 0.00 1.73
65 66 3.305720 AGGCTACCCATTCGTCATCTTA 58.694 45.455 0.00 0.00 0.00 2.10
66 67 2.119495 AGGCTACCCATTCGTCATCTT 58.881 47.619 0.00 0.00 0.00 2.40
67 68 1.794714 AGGCTACCCATTCGTCATCT 58.205 50.000 0.00 0.00 0.00 2.90
68 69 3.589988 CATAGGCTACCCATTCGTCATC 58.410 50.000 0.00 0.00 0.00 2.92
69 70 2.289694 GCATAGGCTACCCATTCGTCAT 60.290 50.000 0.00 0.00 36.96 3.06
70 71 1.070134 GCATAGGCTACCCATTCGTCA 59.930 52.381 0.00 0.00 36.96 4.35
71 72 1.070134 TGCATAGGCTACCCATTCGTC 59.930 52.381 0.00 0.00 41.91 4.20
72 73 1.128200 TGCATAGGCTACCCATTCGT 58.872 50.000 0.00 0.00 41.91 3.85
73 74 2.289631 TGATGCATAGGCTACCCATTCG 60.290 50.000 0.00 0.00 41.91 3.34
74 75 3.423539 TGATGCATAGGCTACCCATTC 57.576 47.619 0.00 0.00 41.91 2.67
75 76 3.139025 ACTTGATGCATAGGCTACCCATT 59.861 43.478 0.00 0.00 41.91 3.16
76 77 2.713167 ACTTGATGCATAGGCTACCCAT 59.287 45.455 0.00 2.19 41.91 4.00
77 78 2.126882 ACTTGATGCATAGGCTACCCA 58.873 47.619 0.00 0.00 41.91 4.51
78 79 2.880890 CAACTTGATGCATAGGCTACCC 59.119 50.000 0.00 0.00 41.91 3.69
79 80 3.545703 ACAACTTGATGCATAGGCTACC 58.454 45.455 0.00 0.00 41.91 3.18
80 81 6.483307 TGAATACAACTTGATGCATAGGCTAC 59.517 38.462 0.00 0.00 41.91 3.58
81 82 6.591001 TGAATACAACTTGATGCATAGGCTA 58.409 36.000 0.00 0.00 41.91 3.93
82 83 5.439721 TGAATACAACTTGATGCATAGGCT 58.560 37.500 0.00 0.00 41.91 4.58
83 84 5.756195 TGAATACAACTTGATGCATAGGC 57.244 39.130 0.00 0.00 41.68 3.93
84 85 6.294342 CCCATGAATACAACTTGATGCATAGG 60.294 42.308 0.00 0.00 0.00 2.57
85 86 6.263842 ACCCATGAATACAACTTGATGCATAG 59.736 38.462 0.00 0.00 0.00 2.23
86 87 6.128486 ACCCATGAATACAACTTGATGCATA 58.872 36.000 0.00 0.00 0.00 3.14
87 88 4.957954 ACCCATGAATACAACTTGATGCAT 59.042 37.500 0.00 0.00 0.00 3.96
88 89 4.343231 ACCCATGAATACAACTTGATGCA 58.657 39.130 0.00 0.00 0.00 3.96
89 90 4.989279 ACCCATGAATACAACTTGATGC 57.011 40.909 0.00 0.00 0.00 3.91
90 91 7.161773 AGAAACCCATGAATACAACTTGATG 57.838 36.000 0.00 0.00 0.00 3.07
91 92 7.671398 AGAAGAAACCCATGAATACAACTTGAT 59.329 33.333 0.00 0.00 0.00 2.57
92 93 7.004086 AGAAGAAACCCATGAATACAACTTGA 58.996 34.615 0.00 0.00 0.00 3.02
93 94 7.219484 AGAAGAAACCCATGAATACAACTTG 57.781 36.000 0.00 0.00 0.00 3.16
94 95 7.393515 GGTAGAAGAAACCCATGAATACAACTT 59.606 37.037 0.00 0.00 0.00 2.66
95 96 6.884836 GGTAGAAGAAACCCATGAATACAACT 59.115 38.462 0.00 0.00 0.00 3.16
96 97 6.657541 TGGTAGAAGAAACCCATGAATACAAC 59.342 38.462 0.00 0.00 36.06 3.32
97 98 6.657541 GTGGTAGAAGAAACCCATGAATACAA 59.342 38.462 0.00 0.00 36.06 2.41
98 99 6.177610 GTGGTAGAAGAAACCCATGAATACA 58.822 40.000 0.00 0.00 36.06 2.29
99 100 6.177610 TGTGGTAGAAGAAACCCATGAATAC 58.822 40.000 0.00 0.00 36.06 1.89
100 101 6.381498 TGTGGTAGAAGAAACCCATGAATA 57.619 37.500 0.00 0.00 36.06 1.75
101 102 5.255397 TGTGGTAGAAGAAACCCATGAAT 57.745 39.130 0.00 0.00 36.06 2.57
102 103 4.715534 TGTGGTAGAAGAAACCCATGAA 57.284 40.909 0.00 0.00 36.06 2.57
103 104 4.622933 CGATGTGGTAGAAGAAACCCATGA 60.623 45.833 0.00 0.00 36.06 3.07
104 105 3.623060 CGATGTGGTAGAAGAAACCCATG 59.377 47.826 0.00 0.00 36.06 3.66
105 106 3.263425 ACGATGTGGTAGAAGAAACCCAT 59.737 43.478 0.00 0.00 36.06 4.00
106 107 2.635915 ACGATGTGGTAGAAGAAACCCA 59.364 45.455 0.00 0.00 36.06 4.51
107 108 3.259902 GACGATGTGGTAGAAGAAACCC 58.740 50.000 0.00 0.00 36.06 4.11
108 109 3.259902 GGACGATGTGGTAGAAGAAACC 58.740 50.000 0.00 0.00 37.53 3.27
109 110 3.259902 GGGACGATGTGGTAGAAGAAAC 58.740 50.000 0.00 0.00 0.00 2.78
110 111 2.235402 GGGGACGATGTGGTAGAAGAAA 59.765 50.000 0.00 0.00 0.00 2.52
111 112 1.829222 GGGGACGATGTGGTAGAAGAA 59.171 52.381 0.00 0.00 0.00 2.52
112 113 1.272816 TGGGGACGATGTGGTAGAAGA 60.273 52.381 0.00 0.00 0.00 2.87
113 114 1.134788 GTGGGGACGATGTGGTAGAAG 60.135 57.143 0.00 0.00 0.00 2.85
114 115 0.899720 GTGGGGACGATGTGGTAGAA 59.100 55.000 0.00 0.00 0.00 2.10
115 116 0.974010 GGTGGGGACGATGTGGTAGA 60.974 60.000 0.00 0.00 0.00 2.59
116 117 1.520666 GGTGGGGACGATGTGGTAG 59.479 63.158 0.00 0.00 0.00 3.18
117 118 2.352821 CGGTGGGGACGATGTGGTA 61.353 63.158 0.00 0.00 0.00 3.25
118 119 3.702048 CGGTGGGGACGATGTGGT 61.702 66.667 0.00 0.00 0.00 4.16
119 120 3.659089 GACGGTGGGGACGATGTGG 62.659 68.421 0.00 0.00 34.93 4.17
120 121 2.125673 GACGGTGGGGACGATGTG 60.126 66.667 0.00 0.00 34.93 3.21
121 122 1.885163 GAAGACGGTGGGGACGATGT 61.885 60.000 0.00 0.00 34.93 3.06
122 123 1.153628 GAAGACGGTGGGGACGATG 60.154 63.158 0.00 0.00 34.93 3.84
123 124 0.033796 TAGAAGACGGTGGGGACGAT 60.034 55.000 0.00 0.00 34.93 3.73
124 125 0.679002 CTAGAAGACGGTGGGGACGA 60.679 60.000 0.00 0.00 34.93 4.20
125 126 1.807886 CTAGAAGACGGTGGGGACG 59.192 63.158 0.00 0.00 37.36 4.79
126 127 1.255667 TGCTAGAAGACGGTGGGGAC 61.256 60.000 0.00 0.00 0.00 4.46
127 128 1.077805 TGCTAGAAGACGGTGGGGA 59.922 57.895 0.00 0.00 0.00 4.81
128 129 1.218316 GTGCTAGAAGACGGTGGGG 59.782 63.158 0.00 0.00 0.00 4.96
129 130 1.218316 GGTGCTAGAAGACGGTGGG 59.782 63.158 0.00 0.00 0.00 4.61
130 131 1.218316 GGGTGCTAGAAGACGGTGG 59.782 63.158 0.00 0.00 0.00 4.61
131 132 0.608640 AAGGGTGCTAGAAGACGGTG 59.391 55.000 0.00 0.00 0.00 4.94
132 133 1.002087 CAAAGGGTGCTAGAAGACGGT 59.998 52.381 0.00 0.00 0.00 4.83
133 134 1.275291 TCAAAGGGTGCTAGAAGACGG 59.725 52.381 0.00 0.00 0.00 4.79
134 135 2.338500 GTCAAAGGGTGCTAGAAGACG 58.662 52.381 0.00 0.00 0.00 4.18
135 136 2.303311 AGGTCAAAGGGTGCTAGAAGAC 59.697 50.000 0.00 0.00 0.00 3.01
136 137 2.621070 AGGTCAAAGGGTGCTAGAAGA 58.379 47.619 0.00 0.00 0.00 2.87
137 138 3.425162 AAGGTCAAAGGGTGCTAGAAG 57.575 47.619 0.00 0.00 0.00 2.85
138 139 3.394606 AGAAAGGTCAAAGGGTGCTAGAA 59.605 43.478 0.00 0.00 0.00 2.10
139 140 2.979678 AGAAAGGTCAAAGGGTGCTAGA 59.020 45.455 0.00 0.00 0.00 2.43
140 141 3.425162 AGAAAGGTCAAAGGGTGCTAG 57.575 47.619 0.00 0.00 0.00 3.42
141 142 4.986054 TTAGAAAGGTCAAAGGGTGCTA 57.014 40.909 0.00 0.00 0.00 3.49
142 143 3.876309 TTAGAAAGGTCAAAGGGTGCT 57.124 42.857 0.00 0.00 0.00 4.40
143 144 5.254115 AGTATTAGAAAGGTCAAAGGGTGC 58.746 41.667 0.00 0.00 0.00 5.01
144 145 5.880887 GGAGTATTAGAAAGGTCAAAGGGTG 59.119 44.000 0.00 0.00 0.00 4.61
145 146 5.045066 GGGAGTATTAGAAAGGTCAAAGGGT 60.045 44.000 0.00 0.00 0.00 4.34
146 147 5.191921 AGGGAGTATTAGAAAGGTCAAAGGG 59.808 44.000 0.00 0.00 0.00 3.95
147 148 6.314899 AGGGAGTATTAGAAAGGTCAAAGG 57.685 41.667 0.00 0.00 0.00 3.11
148 149 7.665974 ACAAAGGGAGTATTAGAAAGGTCAAAG 59.334 37.037 0.00 0.00 0.00 2.77
149 150 7.447238 CACAAAGGGAGTATTAGAAAGGTCAAA 59.553 37.037 0.00 0.00 0.00 2.69
150 151 6.940298 CACAAAGGGAGTATTAGAAAGGTCAA 59.060 38.462 0.00 0.00 0.00 3.18
151 152 6.472887 CACAAAGGGAGTATTAGAAAGGTCA 58.527 40.000 0.00 0.00 0.00 4.02
152 153 5.880887 CCACAAAGGGAGTATTAGAAAGGTC 59.119 44.000 0.00 0.00 0.00 3.85
153 154 5.550403 TCCACAAAGGGAGTATTAGAAAGGT 59.450 40.000 0.00 0.00 38.24 3.50
154 155 6.062258 TCCACAAAGGGAGTATTAGAAAGG 57.938 41.667 0.00 0.00 38.24 3.11
155 156 6.092259 CGTTCCACAAAGGGAGTATTAGAAAG 59.908 42.308 0.00 0.00 38.42 2.62
156 157 5.935789 CGTTCCACAAAGGGAGTATTAGAAA 59.064 40.000 0.00 0.00 38.42 2.52
157 158 5.484715 CGTTCCACAAAGGGAGTATTAGAA 58.515 41.667 0.00 0.00 38.42 2.10
158 159 4.081309 CCGTTCCACAAAGGGAGTATTAGA 60.081 45.833 0.00 0.00 44.20 2.10
159 160 4.081309 TCCGTTCCACAAAGGGAGTATTAG 60.081 45.833 0.00 0.00 44.89 1.73
160 161 3.839490 TCCGTTCCACAAAGGGAGTATTA 59.161 43.478 0.00 0.00 44.89 0.98
161 162 2.640826 TCCGTTCCACAAAGGGAGTATT 59.359 45.455 0.00 0.00 44.89 1.89
162 163 2.262637 TCCGTTCCACAAAGGGAGTAT 58.737 47.619 0.00 0.00 44.89 2.12
163 164 1.719529 TCCGTTCCACAAAGGGAGTA 58.280 50.000 0.00 0.00 44.89 2.59
164 165 2.535224 TCCGTTCCACAAAGGGAGT 58.465 52.632 0.00 0.00 44.89 3.85
166 167 0.765135 TCCTCCGTTCCACAAAGGGA 60.765 55.000 0.00 0.00 46.97 4.20
167 168 0.109723 TTCCTCCGTTCCACAAAGGG 59.890 55.000 0.00 0.00 43.06 3.95
168 169 1.202770 ACTTCCTCCGTTCCACAAAGG 60.203 52.381 0.00 0.00 39.47 3.11
169 170 2.256117 ACTTCCTCCGTTCCACAAAG 57.744 50.000 0.00 0.00 0.00 2.77
170 171 2.224354 GGTACTTCCTCCGTTCCACAAA 60.224 50.000 0.00 0.00 0.00 2.83
171 172 1.345415 GGTACTTCCTCCGTTCCACAA 59.655 52.381 0.00 0.00 0.00 3.33
172 173 0.971386 GGTACTTCCTCCGTTCCACA 59.029 55.000 0.00 0.00 0.00 4.17
173 174 0.971386 TGGTACTTCCTCCGTTCCAC 59.029 55.000 0.00 0.00 37.07 4.02
174 175 0.971386 GTGGTACTTCCTCCGTTCCA 59.029 55.000 0.00 0.00 37.07 3.53
175 176 0.971386 TGTGGTACTTCCTCCGTTCC 59.029 55.000 0.00 0.00 37.07 3.62
176 177 1.668047 CGTGTGGTACTTCCTCCGTTC 60.668 57.143 0.00 0.00 37.07 3.95
177 178 0.316204 CGTGTGGTACTTCCTCCGTT 59.684 55.000 0.00 0.00 37.07 4.44
178 179 0.825010 ACGTGTGGTACTTCCTCCGT 60.825 55.000 0.00 0.00 37.07 4.69
179 180 0.388134 CACGTGTGGTACTTCCTCCG 60.388 60.000 7.58 0.00 37.07 4.63
180 181 0.669625 GCACGTGTGGTACTTCCTCC 60.670 60.000 18.38 0.00 37.07 4.30
231 232 0.174617 ACACACCCAAACAAAAGGCG 59.825 50.000 0.00 0.00 0.00 5.52
244 245 1.291272 GGTGACCCGTAGACACACC 59.709 63.158 0.00 0.00 42.83 4.16
251 252 2.033801 CCACGTATAAGGTGACCCGTAG 59.966 54.545 0.00 0.00 36.17 3.51
265 267 8.724229 GTTTTCTCCTTTTATAACACCACGTAT 58.276 33.333 0.00 0.00 0.00 3.06
286 288 3.938963 TCATCGGAGCACCAATAGTTTTC 59.061 43.478 0.00 0.00 35.59 2.29
293 295 1.349026 CCCTATCATCGGAGCACCAAT 59.651 52.381 0.00 0.00 35.59 3.16
324 326 8.976986 TTCAAGAAGACTTATAACTAACGGAC 57.023 34.615 0.00 0.00 34.70 4.79
328 330 9.089601 GCCTCTTCAAGAAGACTTATAACTAAC 57.910 37.037 8.37 0.00 42.06 2.34
335 337 9.171877 CTTATTTGCCTCTTCAAGAAGACTTAT 57.828 33.333 8.37 2.28 42.06 1.73
409 1042 4.018506 TCATTGCCCCTGTAGAGATGAAAA 60.019 41.667 0.00 0.00 0.00 2.29
410 1043 3.523157 TCATTGCCCCTGTAGAGATGAAA 59.477 43.478 0.00 0.00 0.00 2.69
411 1044 3.114606 TCATTGCCCCTGTAGAGATGAA 58.885 45.455 0.00 0.00 0.00 2.57
412 1045 2.763039 TCATTGCCCCTGTAGAGATGA 58.237 47.619 0.00 0.00 0.00 2.92
413 1046 3.072038 TGATCATTGCCCCTGTAGAGATG 59.928 47.826 0.00 0.00 0.00 2.90
414 1047 3.321039 TGATCATTGCCCCTGTAGAGAT 58.679 45.455 0.00 0.00 0.00 2.75
415 1048 2.763039 TGATCATTGCCCCTGTAGAGA 58.237 47.619 0.00 0.00 0.00 3.10
416 1049 3.558746 GGATGATCATTGCCCCTGTAGAG 60.559 52.174 10.14 0.00 0.00 2.43
417 1050 2.373169 GGATGATCATTGCCCCTGTAGA 59.627 50.000 10.14 0.00 0.00 2.59
418 1051 2.787994 GGATGATCATTGCCCCTGTAG 58.212 52.381 10.14 0.00 0.00 2.74
419 1052 1.072173 CGGATGATCATTGCCCCTGTA 59.928 52.381 10.14 0.00 0.00 2.74
495 1187 0.533491 TCCCCTGTTATCACCGTTCG 59.467 55.000 0.00 0.00 0.00 3.95
506 1198 6.994421 AACAGAAATACAAATTCCCCTGTT 57.006 33.333 0.00 0.00 36.45 3.16
509 1201 8.893563 TCAATAACAGAAATACAAATTCCCCT 57.106 30.769 0.00 0.00 0.00 4.79
614 1306 1.610038 GGTCCAACGTAAACAAAGGGG 59.390 52.381 0.00 0.00 0.00 4.79
615 1307 1.264826 CGGTCCAACGTAAACAAAGGG 59.735 52.381 0.00 0.00 0.00 3.95
616 1308 2.211806 TCGGTCCAACGTAAACAAAGG 58.788 47.619 0.00 0.00 34.94 3.11
617 1309 3.948196 TTCGGTCCAACGTAAACAAAG 57.052 42.857 0.00 0.00 34.94 2.77
647 1339 2.322422 GCGTCTGTGATGCATCGC 59.678 61.111 29.23 29.23 43.32 4.58
794 1521 8.955061 TGCAGTAACTAACTAACTAACTAACG 57.045 34.615 0.00 0.00 35.76 3.18
811 1551 6.963796 AGCATTAATTATCAGCTGCAGTAAC 58.036 36.000 16.64 0.00 33.67 2.50
812 1552 6.205464 GGAGCATTAATTATCAGCTGCAGTAA 59.795 38.462 16.64 6.27 42.27 2.24
813 1553 5.702670 GGAGCATTAATTATCAGCTGCAGTA 59.297 40.000 16.64 1.48 42.27 2.74
814 1554 4.518211 GGAGCATTAATTATCAGCTGCAGT 59.482 41.667 16.64 0.00 42.27 4.40
900 1650 1.625818 AGCAGAACCGAAACAGAGGAT 59.374 47.619 0.00 0.00 0.00 3.24
910 1670 2.261671 GAAGCCGAGCAGAACCGA 59.738 61.111 0.00 0.00 0.00 4.69
911 1671 2.048222 TGAAGCCGAGCAGAACCG 60.048 61.111 0.00 0.00 0.00 4.44
913 1673 1.202582 TCTAGTGAAGCCGAGCAGAAC 59.797 52.381 0.00 0.00 0.00 3.01
915 1675 1.769026 ATCTAGTGAAGCCGAGCAGA 58.231 50.000 0.00 0.00 0.00 4.26
922 1687 4.162509 ACCTGGTTTCTATCTAGTGAAGCC 59.837 45.833 15.68 15.68 41.76 4.35
957 1726 1.664151 GCAGTTTCCGGTATGTGCTAC 59.336 52.381 0.00 0.00 0.00 3.58
971 1740 2.560542 AGACGATCTCACAGAGCAGTTT 59.439 45.455 0.00 0.00 27.99 2.66
1308 2101 3.840666 AGAGAAGGATGTACTCAAGCCAA 59.159 43.478 0.00 0.00 33.69 4.52
1314 2107 3.280295 GACGGAGAGAAGGATGTACTCA 58.720 50.000 0.00 0.00 33.69 3.41
1518 2326 1.725625 GTGGTTCACGCGCACAATG 60.726 57.895 5.73 0.00 0.00 2.82
1521 2329 1.952133 GTAGTGGTTCACGCGCACA 60.952 57.895 5.73 0.00 39.64 4.57
1649 2457 2.281345 GCATGATCTGGAGGCCCG 60.281 66.667 0.00 0.00 34.29 6.13
1791 2612 1.587613 GCTTGGTTTGCGTTGCGAA 60.588 52.632 0.00 0.00 0.00 4.70
1792 2613 2.025441 GCTTGGTTTGCGTTGCGA 59.975 55.556 0.00 0.00 0.00 5.10
1963 2919 4.849518 TCAGTGATCAGTGAGTAGCTAGT 58.150 43.478 26.06 0.00 35.96 2.57
1964 2920 5.299028 ACATCAGTGATCAGTGAGTAGCTAG 59.701 44.000 31.19 18.75 43.29 3.42
1965 2921 5.196695 ACATCAGTGATCAGTGAGTAGCTA 58.803 41.667 31.19 12.61 43.29 3.32
1966 2922 4.022603 ACATCAGTGATCAGTGAGTAGCT 58.977 43.478 31.19 16.30 43.29 3.32
1967 2923 4.383850 ACATCAGTGATCAGTGAGTAGC 57.616 45.455 31.19 3.67 43.29 3.58
2037 3073 4.988598 ACCCGGTGCTTCACGCTG 62.989 66.667 0.00 0.00 40.11 5.18
2141 3177 2.586245 CTTCCCGCATCAGCTCCA 59.414 61.111 0.00 0.00 39.10 3.86
2205 3247 3.771160 CGGGACTTGTAGGCGGCT 61.771 66.667 18.33 18.33 0.00 5.52
2356 3425 9.839817 TGGATCGATGGATTAATTAGTAAACAA 57.160 29.630 0.54 0.00 31.51 2.83
2376 3455 6.429791 TGTTACCAAAATATGTGTGGATCG 57.570 37.500 6.59 0.00 36.23 3.69
2390 3469 4.678309 CGCCCACTTCTTTTTGTTACCAAA 60.678 41.667 0.00 0.00 38.77 3.28
2391 3470 3.181485 CGCCCACTTCTTTTTGTTACCAA 60.181 43.478 0.00 0.00 0.00 3.67
2399 3478 3.284617 ACAACTACGCCCACTTCTTTTT 58.715 40.909 0.00 0.00 0.00 1.94
2405 3484 4.667420 CGACAACTACGCCCACTT 57.333 55.556 0.00 0.00 0.00 3.16
2412 3491 3.360533 CCATGTACTAGCGACAACTACG 58.639 50.000 2.43 0.00 0.00 3.51
2414 3493 3.021695 AGCCATGTACTAGCGACAACTA 58.978 45.455 2.43 0.00 0.00 2.24
2416 3495 1.927174 CAGCCATGTACTAGCGACAAC 59.073 52.381 2.43 0.00 0.00 3.32
2418 3497 1.405463 CTCAGCCATGTACTAGCGACA 59.595 52.381 0.85 0.85 0.00 4.35
2421 3500 2.605823 GCTACTCAGCCATGTACTAGCG 60.606 54.545 0.00 0.00 42.37 4.26
2476 3555 2.993264 ACACATTGGGCAGGCAGC 60.993 61.111 0.00 0.00 44.65 5.25
2545 3628 4.285807 TGCATATGTACGTGGAAATTGC 57.714 40.909 4.29 1.14 0.00 3.56
2546 3629 4.734854 GCTTGCATATGTACGTGGAAATTG 59.265 41.667 4.29 0.00 0.00 2.32
2547 3630 4.397730 TGCTTGCATATGTACGTGGAAATT 59.602 37.500 4.29 0.00 0.00 1.82
2548 3631 3.944650 TGCTTGCATATGTACGTGGAAAT 59.055 39.130 4.29 0.00 0.00 2.17
2549 3632 3.126171 GTGCTTGCATATGTACGTGGAAA 59.874 43.478 4.29 0.00 0.00 3.13
2599 3682 0.517316 GCCGGTGTAAACTGAGCAAG 59.483 55.000 1.90 0.00 0.00 4.01
2715 3798 3.913548 TTGCATTCAGTTTGTACGCAT 57.086 38.095 0.00 0.00 0.00 4.73
2782 3865 3.243434 GGATACGTCTGGATGTTCGATGT 60.243 47.826 0.00 0.00 0.00 3.06
2804 3904 0.105964 TGGGTGAGAAACTGTGTCCG 59.894 55.000 0.00 0.00 0.00 4.79
2805 3905 2.341846 TTGGGTGAGAAACTGTGTCC 57.658 50.000 0.00 0.00 0.00 4.02
2820 3920 0.450184 CGATTGGCTACCGTTTTGGG 59.550 55.000 0.00 0.00 44.64 4.12
2921 4021 3.184379 CCACGTCTGCCGAAACATATATG 59.816 47.826 11.29 11.29 40.70 1.78
2923 4023 2.482316 CCCACGTCTGCCGAAACATATA 60.482 50.000 0.00 0.00 40.70 0.86
2924 4024 1.651987 CCACGTCTGCCGAAACATAT 58.348 50.000 0.00 0.00 40.70 1.78
2929 4029 2.029964 GTCCCACGTCTGCCGAAA 59.970 61.111 0.00 0.00 40.70 3.46
2930 4030 4.351938 CGTCCCACGTCTGCCGAA 62.352 66.667 0.00 0.00 40.70 4.30
2935 4035 1.079819 ATTGCTCGTCCCACGTCTG 60.080 57.895 0.00 0.00 43.14 3.51
2936 4036 1.079819 CATTGCTCGTCCCACGTCT 60.080 57.895 0.00 0.00 43.14 4.18
2937 4037 2.100631 CCATTGCTCGTCCCACGTC 61.101 63.158 0.00 0.00 43.14 4.34
2938 4038 1.537814 TACCATTGCTCGTCCCACGT 61.538 55.000 0.00 0.00 43.14 4.49
2953 4617 2.054799 GAGGATGGCAAGGGTATACCA 58.945 52.381 23.33 1.93 43.89 3.25
2968 4632 1.033574 GACCGGTGATTCTCGAGGAT 58.966 55.000 14.63 9.86 0.00 3.24
3017 4681 0.445436 GCATGTTGAGTTCCAGCTCG 59.555 55.000 0.00 0.00 38.28 5.03
3018 4682 1.527034 TGCATGTTGAGTTCCAGCTC 58.473 50.000 0.00 0.00 36.12 4.09
3019 4683 1.816835 CATGCATGTTGAGTTCCAGCT 59.183 47.619 18.91 0.00 0.00 4.24
3020 4684 1.135199 CCATGCATGTTGAGTTCCAGC 60.135 52.381 24.58 0.00 0.00 4.85
3021 4685 2.163010 GTCCATGCATGTTGAGTTCCAG 59.837 50.000 24.58 5.98 0.00 3.86
3022 4686 2.161855 GTCCATGCATGTTGAGTTCCA 58.838 47.619 24.58 0.00 0.00 3.53
3023 4687 2.161855 TGTCCATGCATGTTGAGTTCC 58.838 47.619 24.58 5.37 0.00 3.62
3024 4688 3.366679 CCTTGTCCATGCATGTTGAGTTC 60.367 47.826 24.58 5.69 0.00 3.01
3025 4689 2.559668 CCTTGTCCATGCATGTTGAGTT 59.440 45.455 24.58 0.00 0.00 3.01
3026 4690 2.165167 CCTTGTCCATGCATGTTGAGT 58.835 47.619 24.58 0.00 0.00 3.41
3027 4691 2.422479 CTCCTTGTCCATGCATGTTGAG 59.578 50.000 24.58 15.50 0.00 3.02
3028 4692 2.040145 TCTCCTTGTCCATGCATGTTGA 59.960 45.455 24.58 13.24 0.00 3.18
3029 4693 2.439409 TCTCCTTGTCCATGCATGTTG 58.561 47.619 24.58 11.03 0.00 3.33
3030 4694 2.821969 GTTCTCCTTGTCCATGCATGTT 59.178 45.455 24.58 0.00 0.00 2.71
3031 4695 2.224843 TGTTCTCCTTGTCCATGCATGT 60.225 45.455 24.58 0.00 0.00 3.21
3032 4696 2.439409 TGTTCTCCTTGTCCATGCATG 58.561 47.619 20.19 20.19 0.00 4.06
3033 4697 2.885135 TGTTCTCCTTGTCCATGCAT 57.115 45.000 0.00 0.00 0.00 3.96
3034 4698 2.885135 ATGTTCTCCTTGTCCATGCA 57.115 45.000 0.00 0.00 0.00 3.96
3035 4699 4.702131 AGTTTATGTTCTCCTTGTCCATGC 59.298 41.667 0.00 0.00 0.00 4.06
3036 4700 6.824305 AAGTTTATGTTCTCCTTGTCCATG 57.176 37.500 0.00 0.00 0.00 3.66
3037 4701 6.777580 ACAAAGTTTATGTTCTCCTTGTCCAT 59.222 34.615 0.00 0.00 0.00 3.41
3038 4702 6.126409 ACAAAGTTTATGTTCTCCTTGTCCA 58.874 36.000 0.00 0.00 0.00 4.02
3039 4703 6.565999 CGACAAAGTTTATGTTCTCCTTGTCC 60.566 42.308 0.00 0.00 0.00 4.02
3040 4704 6.202188 TCGACAAAGTTTATGTTCTCCTTGTC 59.798 38.462 0.00 0.00 0.00 3.18
3041 4705 6.053005 TCGACAAAGTTTATGTTCTCCTTGT 58.947 36.000 0.00 0.00 0.00 3.16
3042 4706 6.539649 TCGACAAAGTTTATGTTCTCCTTG 57.460 37.500 0.00 0.00 0.00 3.61
3043 4707 5.179555 GCTCGACAAAGTTTATGTTCTCCTT 59.820 40.000 0.00 0.00 0.00 3.36
3044 4708 4.691216 GCTCGACAAAGTTTATGTTCTCCT 59.309 41.667 0.00 0.00 0.00 3.69
3045 4709 4.451096 TGCTCGACAAAGTTTATGTTCTCC 59.549 41.667 0.00 0.00 0.00 3.71
3046 4710 5.591643 TGCTCGACAAAGTTTATGTTCTC 57.408 39.130 0.00 0.00 0.00 2.87
3047 4711 4.083802 GCTGCTCGACAAAGTTTATGTTCT 60.084 41.667 0.00 0.00 0.00 3.01
3048 4712 4.151798 GCTGCTCGACAAAGTTTATGTTC 58.848 43.478 0.00 0.00 0.00 3.18
3049 4713 3.563808 TGCTGCTCGACAAAGTTTATGTT 59.436 39.130 0.00 0.00 0.00 2.71
3050 4714 3.138304 TGCTGCTCGACAAAGTTTATGT 58.862 40.909 0.00 0.00 0.00 2.29
3051 4715 3.740590 CTGCTGCTCGACAAAGTTTATG 58.259 45.455 0.00 0.00 0.00 1.90
3052 4716 2.160417 GCTGCTGCTCGACAAAGTTTAT 59.840 45.455 8.53 0.00 36.03 1.40
3053 4717 1.531149 GCTGCTGCTCGACAAAGTTTA 59.469 47.619 8.53 0.00 36.03 2.01
3054 4718 0.308993 GCTGCTGCTCGACAAAGTTT 59.691 50.000 8.53 0.00 36.03 2.66
3055 4719 1.835483 CGCTGCTGCTCGACAAAGTT 61.835 55.000 14.03 0.00 36.97 2.66
3056 4720 2.313172 CGCTGCTGCTCGACAAAGT 61.313 57.895 14.03 0.00 36.97 2.66
3057 4721 2.473378 CGCTGCTGCTCGACAAAG 59.527 61.111 14.03 0.00 36.97 2.77
3058 4722 3.043713 CCGCTGCTGCTCGACAAA 61.044 61.111 14.03 0.00 36.97 2.83
3099 4763 2.668457 GTCCTACTTTGTCGCATGAGTG 59.332 50.000 0.00 0.00 0.00 3.51
3100 4764 2.671351 CGTCCTACTTTGTCGCATGAGT 60.671 50.000 0.00 0.00 0.00 3.41
3101 4765 1.920574 CGTCCTACTTTGTCGCATGAG 59.079 52.381 0.00 0.00 0.00 2.90
3102 4766 1.990799 CGTCCTACTTTGTCGCATGA 58.009 50.000 0.00 0.00 0.00 3.07
3103 4767 0.370273 GCGTCCTACTTTGTCGCATG 59.630 55.000 0.00 0.00 45.01 4.06
3104 4768 1.076533 CGCGTCCTACTTTGTCGCAT 61.077 55.000 0.00 0.00 45.77 4.73
3105 4769 1.731613 CGCGTCCTACTTTGTCGCA 60.732 57.895 0.00 0.00 45.77 5.10
3106 4770 3.067846 GCGCGTCCTACTTTGTCGC 62.068 63.158 8.43 0.00 42.78 5.19
3107 4771 1.674611 CTGCGCGTCCTACTTTGTCG 61.675 60.000 8.43 0.00 0.00 4.35
3108 4772 1.352156 CCTGCGCGTCCTACTTTGTC 61.352 60.000 8.43 0.00 0.00 3.18
3109 4773 1.374252 CCTGCGCGTCCTACTTTGT 60.374 57.895 8.43 0.00 0.00 2.83
3110 4774 2.740714 GCCTGCGCGTCCTACTTTG 61.741 63.158 8.43 0.00 0.00 2.77
3111 4775 2.434359 GCCTGCGCGTCCTACTTT 60.434 61.111 8.43 0.00 0.00 2.66
3132 4796 1.153025 TGATGGCCTGCTCATCAGC 60.153 57.895 3.32 0.00 43.98 4.26
3134 4798 1.153309 CGTGATGGCCTGCTCATCA 60.153 57.895 3.32 14.98 45.86 3.07
3135 4799 1.890979 CCGTGATGGCCTGCTCATC 60.891 63.158 3.32 0.00 40.85 2.92
3136 4800 2.191375 CCGTGATGGCCTGCTCAT 59.809 61.111 3.32 0.00 0.00 2.90
3137 4801 3.002583 TCCGTGATGGCCTGCTCA 61.003 61.111 3.32 1.21 37.80 4.26
3138 4802 2.512515 GTCCGTGATGGCCTGCTC 60.513 66.667 3.32 0.00 37.80 4.26
3139 4803 2.809861 CTTGTCCGTGATGGCCTGCT 62.810 60.000 3.32 0.00 37.80 4.24
3140 4804 2.359850 TTGTCCGTGATGGCCTGC 60.360 61.111 3.32 0.00 37.80 4.85
3141 4805 0.321564 TTCTTGTCCGTGATGGCCTG 60.322 55.000 3.32 0.00 37.80 4.85
3142 4806 0.321653 GTTCTTGTCCGTGATGGCCT 60.322 55.000 3.32 0.00 37.80 5.19
3143 4807 0.605319 TGTTCTTGTCCGTGATGGCC 60.605 55.000 0.00 0.00 37.80 5.36
3144 4808 0.517316 GTGTTCTTGTCCGTGATGGC 59.483 55.000 0.00 0.00 37.80 4.40
3145 4809 1.800586 CAGTGTTCTTGTCCGTGATGG 59.199 52.381 0.00 0.00 40.09 3.51
3146 4810 2.476619 GTCAGTGTTCTTGTCCGTGATG 59.523 50.000 0.00 0.00 0.00 3.07
3147 4811 2.102420 TGTCAGTGTTCTTGTCCGTGAT 59.898 45.455 0.00 0.00 0.00 3.06
3148 4812 1.478916 TGTCAGTGTTCTTGTCCGTGA 59.521 47.619 0.00 0.00 0.00 4.35
3149 4813 1.860950 CTGTCAGTGTTCTTGTCCGTG 59.139 52.381 0.00 0.00 0.00 4.94
3150 4814 1.806623 GCTGTCAGTGTTCTTGTCCGT 60.807 52.381 0.93 0.00 0.00 4.69
3151 4815 0.861837 GCTGTCAGTGTTCTTGTCCG 59.138 55.000 0.93 0.00 0.00 4.79
3152 4816 2.139118 GAGCTGTCAGTGTTCTTGTCC 58.861 52.381 0.93 0.00 0.00 4.02
3153 4817 2.139118 GGAGCTGTCAGTGTTCTTGTC 58.861 52.381 0.93 0.00 0.00 3.18
3154 4818 1.539065 CGGAGCTGTCAGTGTTCTTGT 60.539 52.381 0.93 0.00 0.00 3.16
3155 4819 1.143305 CGGAGCTGTCAGTGTTCTTG 58.857 55.000 0.93 0.00 0.00 3.02
3156 4820 3.595691 CGGAGCTGTCAGTGTTCTT 57.404 52.632 0.93 0.00 0.00 2.52
3170 4834 3.103911 GGTGTCAACGACGCGGAG 61.104 66.667 12.47 6.26 43.12 4.63
3171 4835 3.834447 CTGGTGTCAACGACGCGGA 62.834 63.158 12.47 0.00 43.12 5.54
3172 4836 3.403057 CTGGTGTCAACGACGCGG 61.403 66.667 12.47 0.00 43.12 6.46
3173 4837 4.059459 GCTGGTGTCAACGACGCG 62.059 66.667 3.53 3.53 43.12 6.01
3174 4838 2.943345 CTGCTGGTGTCAACGACGC 61.943 63.158 0.00 0.00 41.69 5.19
3175 4839 2.943345 GCTGCTGGTGTCAACGACG 61.943 63.158 0.00 0.00 34.95 5.12
3176 4840 1.595382 AGCTGCTGGTGTCAACGAC 60.595 57.895 0.00 0.00 0.00 4.34
3177 4841 1.595109 CAGCTGCTGGTGTCAACGA 60.595 57.895 21.71 0.00 36.97 3.85
3178 4842 2.941333 CAGCTGCTGGTGTCAACG 59.059 61.111 21.71 0.00 36.97 4.10
3179 4843 2.641559 GCAGCTGCTGGTGTCAAC 59.358 61.111 31.33 8.48 43.05 3.18
3189 4853 2.744768 GGCAACTACGAGCAGCTGC 61.745 63.158 31.53 31.53 36.99 5.25
3190 4854 1.374631 TGGCAACTACGAGCAGCTG 60.375 57.895 10.11 10.11 37.61 4.24
3191 4855 1.374758 GTGGCAACTACGAGCAGCT 60.375 57.895 0.00 0.00 37.61 4.24
3192 4856 2.391389 GGTGGCAACTACGAGCAGC 61.391 63.158 0.00 0.00 37.61 5.25
3193 4857 1.005037 TGGTGGCAACTACGAGCAG 60.005 57.895 3.27 0.00 37.61 4.24
3194 4858 1.301401 GTGGTGGCAACTACGAGCA 60.301 57.895 3.27 0.00 37.61 4.26
3195 4859 0.882927 TTGTGGTGGCAACTACGAGC 60.883 55.000 3.27 0.00 40.50 5.03
3196 4860 0.865769 GTTGTGGTGGCAACTACGAG 59.134 55.000 3.27 0.00 43.74 4.18
3197 4861 0.876777 CGTTGTGGTGGCAACTACGA 60.877 55.000 17.33 0.00 45.42 3.43
3198 4862 0.876777 TCGTTGTGGTGGCAACTACG 60.877 55.000 16.49 16.49 44.61 3.51
3199 4863 0.584876 GTCGTTGTGGTGGCAACTAC 59.415 55.000 3.27 0.00 44.61 2.73
3200 4864 0.533308 GGTCGTTGTGGTGGCAACTA 60.533 55.000 3.27 0.00 44.61 2.24
3201 4865 1.822186 GGTCGTTGTGGTGGCAACT 60.822 57.895 3.27 0.00 44.61 3.16
3202 4866 1.452145 ATGGTCGTTGTGGTGGCAAC 61.452 55.000 0.00 0.00 43.68 4.17
3203 4867 1.152860 ATGGTCGTTGTGGTGGCAA 60.153 52.632 0.00 0.00 0.00 4.52
3204 4868 1.896183 CATGGTCGTTGTGGTGGCA 60.896 57.895 0.00 0.00 0.00 4.92
3205 4869 1.577328 CTCATGGTCGTTGTGGTGGC 61.577 60.000 0.00 0.00 0.00 5.01
3206 4870 0.955428 CCTCATGGTCGTTGTGGTGG 60.955 60.000 0.00 0.00 0.00 4.61
3207 4871 0.250295 ACCTCATGGTCGTTGTGGTG 60.250 55.000 0.00 0.00 44.78 4.17
3208 4872 2.142220 ACCTCATGGTCGTTGTGGT 58.858 52.632 0.00 0.00 44.78 4.16
3213 4877 2.764637 GGGCCAACCTCATGGTCGTT 62.765 60.000 4.39 0.00 46.33 3.85
3214 4878 3.268103 GGGCCAACCTCATGGTCGT 62.268 63.158 4.39 0.00 46.33 4.34
3215 4879 2.438434 GGGCCAACCTCATGGTCG 60.438 66.667 4.39 0.00 46.33 4.79
3218 4882 2.438434 GACGGGCCAACCTCATGG 60.438 66.667 4.39 0.00 43.70 3.66
3219 4883 2.819595 CGACGGGCCAACCTCATG 60.820 66.667 4.39 0.00 36.97 3.07
3220 4884 3.000819 TCGACGGGCCAACCTCAT 61.001 61.111 4.39 0.00 36.97 2.90
3221 4885 3.998672 GTCGACGGGCCAACCTCA 61.999 66.667 4.39 0.00 36.97 3.86
3228 4892 4.867599 GATGGACGTCGACGGGCC 62.868 72.222 37.89 34.71 44.95 5.80
3229 4893 3.426117 ATGATGGACGTCGACGGGC 62.426 63.158 37.89 28.60 44.95 6.13
3230 4894 1.588932 CATGATGGACGTCGACGGG 60.589 63.158 37.89 15.57 44.95 5.28
3231 4895 1.588932 CCATGATGGACGTCGACGG 60.589 63.158 37.89 21.83 40.96 4.79
3232 4896 1.431845 TCCATGATGGACGTCGACG 59.568 57.895 34.58 34.58 42.67 5.12
3240 4904 2.237143 GTTGAGTGAGGTCCATGATGGA 59.763 50.000 10.75 10.75 45.98 3.41
3241 4905 2.636830 GTTGAGTGAGGTCCATGATGG 58.363 52.381 4.74 4.74 39.43 3.51
3242 4906 2.636830 GGTTGAGTGAGGTCCATGATG 58.363 52.381 0.00 0.00 0.00 3.07
3243 4907 1.208052 CGGTTGAGTGAGGTCCATGAT 59.792 52.381 0.00 0.00 0.00 2.45
3244 4908 0.608130 CGGTTGAGTGAGGTCCATGA 59.392 55.000 0.00 0.00 0.00 3.07
3245 4909 0.608130 TCGGTTGAGTGAGGTCCATG 59.392 55.000 0.00 0.00 0.00 3.66
3246 4910 1.208052 CATCGGTTGAGTGAGGTCCAT 59.792 52.381 0.00 0.00 0.00 3.41
3247 4911 0.608130 CATCGGTTGAGTGAGGTCCA 59.392 55.000 0.00 0.00 0.00 4.02
3248 4912 0.895530 TCATCGGTTGAGTGAGGTCC 59.104 55.000 0.00 0.00 0.00 4.46
3249 4913 2.969628 ATCATCGGTTGAGTGAGGTC 57.030 50.000 0.00 0.00 37.89 3.85
3250 4914 3.322254 GGATATCATCGGTTGAGTGAGGT 59.678 47.826 4.83 0.00 37.89 3.85
3251 4915 3.321968 TGGATATCATCGGTTGAGTGAGG 59.678 47.826 4.83 0.00 37.89 3.86
3252 4916 4.554292 CTGGATATCATCGGTTGAGTGAG 58.446 47.826 4.83 0.00 37.89 3.51
3253 4917 3.321968 CCTGGATATCATCGGTTGAGTGA 59.678 47.826 4.83 0.00 37.89 3.41
3254 4918 3.657634 CCTGGATATCATCGGTTGAGTG 58.342 50.000 4.83 0.00 37.89 3.51
3255 4919 2.037772 GCCTGGATATCATCGGTTGAGT 59.962 50.000 4.83 0.00 37.89 3.41
3256 4920 2.301296 AGCCTGGATATCATCGGTTGAG 59.699 50.000 4.83 0.00 37.89 3.02
3257 4921 2.037641 CAGCCTGGATATCATCGGTTGA 59.962 50.000 4.83 0.00 39.12 3.18
3258 4922 2.420642 CAGCCTGGATATCATCGGTTG 58.579 52.381 4.83 5.93 0.00 3.77
3259 4923 1.271054 GCAGCCTGGATATCATCGGTT 60.271 52.381 4.83 0.00 0.00 4.44
3260 4924 0.322975 GCAGCCTGGATATCATCGGT 59.677 55.000 4.83 0.00 0.00 4.69
3261 4925 0.738762 CGCAGCCTGGATATCATCGG 60.739 60.000 4.83 2.64 0.00 4.18
3262 4926 0.738762 CCGCAGCCTGGATATCATCG 60.739 60.000 4.83 0.00 0.00 3.84
3263 4927 0.610174 TCCGCAGCCTGGATATCATC 59.390 55.000 4.83 0.00 0.00 2.92
3264 4928 0.322975 GTCCGCAGCCTGGATATCAT 59.677 55.000 4.83 0.00 37.93 2.45
3265 4929 0.760567 AGTCCGCAGCCTGGATATCA 60.761 55.000 4.83 0.00 37.93 2.15
3266 4930 1.067495 GTAGTCCGCAGCCTGGATATC 60.067 57.143 0.00 0.00 37.93 1.63
3267 4931 0.969894 GTAGTCCGCAGCCTGGATAT 59.030 55.000 0.00 0.00 37.93 1.63
3268 4932 1.452953 CGTAGTCCGCAGCCTGGATA 61.453 60.000 0.00 0.00 37.93 2.59
3269 4933 2.786495 CGTAGTCCGCAGCCTGGAT 61.786 63.158 0.00 0.00 37.93 3.41
3270 4934 3.449227 CGTAGTCCGCAGCCTGGA 61.449 66.667 0.00 0.00 0.00 3.86
3271 4935 3.449227 TCGTAGTCCGCAGCCTGG 61.449 66.667 0.00 0.00 36.19 4.45
3272 4936 2.202623 GTCGTAGTCCGCAGCCTG 60.203 66.667 0.00 0.00 36.19 4.85
3273 4937 3.812019 CGTCGTAGTCCGCAGCCT 61.812 66.667 0.00 0.00 36.19 4.58
3274 4938 3.736482 CTCGTCGTAGTCCGCAGCC 62.736 68.421 0.00 0.00 36.19 4.85
3275 4939 2.277373 CTCGTCGTAGTCCGCAGC 60.277 66.667 0.00 0.00 36.19 5.25
3276 4940 1.642037 TTCCTCGTCGTAGTCCGCAG 61.642 60.000 0.00 0.00 36.19 5.18
3277 4941 1.236616 TTTCCTCGTCGTAGTCCGCA 61.237 55.000 0.00 0.00 36.19 5.69
3278 4942 0.109597 TTTTCCTCGTCGTAGTCCGC 60.110 55.000 0.00 0.00 36.19 5.54
3279 4943 2.556534 ATTTTCCTCGTCGTAGTCCG 57.443 50.000 0.00 0.00 38.13 4.79
3280 4944 4.208666 GCATAATTTTCCTCGTCGTAGTCC 59.791 45.833 0.00 0.00 0.00 3.85
3281 4945 4.208666 GGCATAATTTTCCTCGTCGTAGTC 59.791 45.833 0.00 0.00 0.00 2.59
3282 4946 4.117685 GGCATAATTTTCCTCGTCGTAGT 58.882 43.478 0.00 0.00 0.00 2.73
3283 4947 4.116961 TGGCATAATTTTCCTCGTCGTAG 58.883 43.478 0.00 0.00 0.00 3.51
3284 4948 4.126208 TGGCATAATTTTCCTCGTCGTA 57.874 40.909 0.00 0.00 0.00 3.43
3285 4949 2.980568 TGGCATAATTTTCCTCGTCGT 58.019 42.857 0.00 0.00 0.00 4.34
3286 4950 3.303990 CCATGGCATAATTTTCCTCGTCG 60.304 47.826 0.00 0.00 0.00 5.12
3287 4951 3.004734 CCCATGGCATAATTTTCCTCGTC 59.995 47.826 6.09 0.00 0.00 4.20
3288 4952 2.958355 CCCATGGCATAATTTTCCTCGT 59.042 45.455 6.09 0.00 0.00 4.18
3289 4953 3.221771 TCCCATGGCATAATTTTCCTCG 58.778 45.455 6.09 0.00 0.00 4.63
3290 4954 5.612725 TTTCCCATGGCATAATTTTCCTC 57.387 39.130 6.09 0.00 0.00 3.71
3291 4955 5.725822 TCTTTTCCCATGGCATAATTTTCCT 59.274 36.000 6.09 0.00 0.00 3.36
3292 4956 5.988287 TCTTTTCCCATGGCATAATTTTCC 58.012 37.500 6.09 0.00 0.00 3.13
3293 4957 6.484308 CCATCTTTTCCCATGGCATAATTTTC 59.516 38.462 6.09 0.00 33.37 2.29
3294 4958 6.358991 CCATCTTTTCCCATGGCATAATTTT 58.641 36.000 6.09 0.00 33.37 1.82
3295 4959 5.932455 CCATCTTTTCCCATGGCATAATTT 58.068 37.500 6.09 0.00 33.37 1.82
3296 4960 5.556006 CCATCTTTTCCCATGGCATAATT 57.444 39.130 6.09 0.00 33.37 1.40
3303 4967 0.826062 GGTGCCATCTTTTCCCATGG 59.174 55.000 4.14 4.14 42.39 3.66
3304 4968 1.753073 GAGGTGCCATCTTTTCCCATG 59.247 52.381 0.00 0.00 0.00 3.66
3305 4969 1.358787 TGAGGTGCCATCTTTTCCCAT 59.641 47.619 0.00 0.00 0.00 4.00
3306 4970 0.776810 TGAGGTGCCATCTTTTCCCA 59.223 50.000 0.00 0.00 0.00 4.37
3307 4971 1.753073 CATGAGGTGCCATCTTTTCCC 59.247 52.381 0.00 0.00 0.00 3.97
3308 4972 2.424956 GACATGAGGTGCCATCTTTTCC 59.575 50.000 0.00 0.00 0.00 3.13
3309 4973 2.424956 GGACATGAGGTGCCATCTTTTC 59.575 50.000 0.00 0.00 0.00 2.29
3310 4974 2.450476 GGACATGAGGTGCCATCTTTT 58.550 47.619 0.00 0.00 0.00 2.27
3311 4975 2.134789 GGACATGAGGTGCCATCTTT 57.865 50.000 0.00 0.00 0.00 2.52
3312 4976 3.890527 GGACATGAGGTGCCATCTT 57.109 52.632 0.00 0.00 0.00 2.40
3318 4982 1.448540 CACGAGGGACATGAGGTGC 60.449 63.158 0.00 0.00 37.06 5.01
3319 4983 1.219124 CCACGAGGGACATGAGGTG 59.781 63.158 0.00 0.00 40.01 4.00
3320 4984 3.713650 CCACGAGGGACATGAGGT 58.286 61.111 0.00 0.00 40.01 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.