Multiple sequence alignment - TraesCS1B01G417800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G417800 chr1B 100.000 3875 0 0 1 3875 642067231 642063357 0.000000e+00 7156
1 TraesCS1B01G417800 chr1D 95.961 2451 67 8 426 2875 465148833 465146414 0.000000e+00 3949
2 TraesCS1B01G417800 chr1D 92.742 372 24 3 1 372 203869532 203869900 5.700000e-148 534
3 TraesCS1B01G417800 chr1D 91.083 314 16 8 3568 3873 465103219 465102910 7.750000e-112 414
4 TraesCS1B01G417800 chr1A 95.187 2223 78 12 679 2881 557553249 557551036 0.000000e+00 3485
5 TraesCS1B01G417800 chr1A 93.801 613 31 6 2292 2900 557541824 557541215 0.000000e+00 915
6 TraesCS1B01G417800 chr1A 90.966 321 14 8 3561 3873 557428721 557428408 5.990000e-113 418
7 TraesCS1B01G417800 chr1A 83.857 223 21 6 372 580 557553537 557553316 8.490000e-47 198
8 TraesCS1B01G417800 chr4B 93.011 372 24 1 1 372 12091335 12091704 3.410000e-150 542
9 TraesCS1B01G417800 chr4B 92.183 371 26 3 1 371 91749983 91750350 4.440000e-144 521
10 TraesCS1B01G417800 chr4B 92.000 375 25 4 3 375 518669783 518669412 4.440000e-144 521
11 TraesCS1B01G417800 chr4B 90.446 314 19 7 3568 3873 111784916 111784606 1.680000e-108 403
12 TraesCS1B01G417800 chr2B 92.954 369 24 2 3 371 19459223 19459589 1.580000e-148 536
13 TraesCS1B01G417800 chr6B 92.473 372 27 1 1 371 146818946 146819317 7.370000e-147 531
14 TraesCS1B01G417800 chr4D 92.493 373 22 5 1 373 491394988 491394622 2.650000e-146 529
15 TraesCS1B01G417800 chr5D 92.246 374 24 4 1 371 110351237 110351608 3.430000e-145 525
16 TraesCS1B01G417800 chr3D 92.183 371 27 1 1 371 61053086 61052718 1.230000e-144 523
17 TraesCS1B01G417800 chr3D 94.156 308 17 1 3261 3568 581573832 581574138 5.860000e-128 468
18 TraesCS1B01G417800 chr3D 74.330 896 194 28 1826 2712 374060037 374060905 7.970000e-92 348
19 TraesCS1B01G417800 chr5B 80.438 639 82 24 2966 3566 529943888 529943255 7.640000e-122 448
20 TraesCS1B01G417800 chr5B 76.138 637 94 33 2966 3565 253430105 253429490 8.200000e-72 281
21 TraesCS1B01G417800 chr3B 74.860 895 191 26 1826 2712 487856404 487857272 3.660000e-100 375
22 TraesCS1B01G417800 chr3A 74.276 898 191 32 1826 2712 496513526 496514394 3.710000e-90 342
23 TraesCS1B01G417800 chr3A 92.982 171 9 2 3576 3745 22222753 22222921 2.990000e-61 246
24 TraesCS1B01G417800 chr3A 91.765 170 12 1 3576 3745 22220223 22220390 6.470000e-58 235
25 TraesCS1B01G417800 chr3A 90.588 170 8 2 3576 3745 22217703 22217864 6.520000e-53 219


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G417800 chr1B 642063357 642067231 3874 True 7156.000000 7156 100.000000 1 3875 1 chr1B.!!$R1 3874
1 TraesCS1B01G417800 chr1D 465146414 465148833 2419 True 3949.000000 3949 95.961000 426 2875 1 chr1D.!!$R2 2449
2 TraesCS1B01G417800 chr1A 557551036 557553537 2501 True 1841.500000 3485 89.522000 372 2881 2 chr1A.!!$R3 2509
3 TraesCS1B01G417800 chr1A 557541215 557541824 609 True 915.000000 915 93.801000 2292 2900 1 chr1A.!!$R2 608
4 TraesCS1B01G417800 chr3D 374060037 374060905 868 False 348.000000 348 74.330000 1826 2712 1 chr3D.!!$F1 886
5 TraesCS1B01G417800 chr5B 529943255 529943888 633 True 448.000000 448 80.438000 2966 3566 1 chr5B.!!$R2 600
6 TraesCS1B01G417800 chr5B 253429490 253430105 615 True 281.000000 281 76.138000 2966 3565 1 chr5B.!!$R1 599
7 TraesCS1B01G417800 chr3B 487856404 487857272 868 False 375.000000 375 74.860000 1826 2712 1 chr3B.!!$F1 886
8 TraesCS1B01G417800 chr3A 496513526 496514394 868 False 342.000000 342 74.276000 1826 2712 1 chr3A.!!$F1 886
9 TraesCS1B01G417800 chr3A 22217703 22222921 5218 False 233.333333 246 91.778333 3576 3745 3 chr3A.!!$F2 169

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
85 86 0.179225 GAAGGCATAACACACGTGCG 60.179 55.000 17.22 9.16 39.69 5.34 F
86 87 0.882927 AAGGCATAACACACGTGCGT 60.883 50.000 17.22 9.99 39.69 5.24 F
451 452 0.904649 GCCATGGGGAAAAAGGAAGG 59.095 55.000 15.13 0.00 35.59 3.46 F
759 812 1.399215 CGCGTGTTTAAACCGCAGAAT 60.399 47.619 33.12 0.00 43.69 2.40 F
760 813 1.976045 GCGTGTTTAAACCGCAGAATG 59.024 47.619 31.37 15.21 43.30 2.67 F
1839 1899 2.428071 GACACCACCGACGACGTC 60.428 66.667 18.04 18.04 37.88 4.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1118 1178 0.533951 GAACGGGTCCAGGTAATCGT 59.466 55.000 0.00 0.0 0.00 3.73 R
1276 1336 1.154727 CGCGCACGGTAACTTTGAC 60.155 57.895 8.75 0.0 34.97 3.18 R
1460 1520 1.367471 CAGCAGTCGGTCTTGTGGA 59.633 57.895 0.00 0.0 0.00 4.02 R
2529 2589 2.022129 GTTGGCGACGTGTCTCCTG 61.022 63.158 10.14 0.0 35.57 3.86 R
2731 2791 2.506472 GTCGGGGATGAAGGAGGC 59.494 66.667 0.00 0.0 0.00 4.70 R
3161 3244 0.391927 CGGGCAGAATAACGGGTCAA 60.392 55.000 0.00 0.0 0.00 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
72 73 6.832520 AAAACACACATATACATGAAGGCA 57.167 33.333 0.00 0.00 35.96 4.75
73 74 7.408756 AAAACACACATATACATGAAGGCAT 57.591 32.000 0.00 0.00 35.96 4.40
74 75 8.518430 AAAACACACATATACATGAAGGCATA 57.482 30.769 0.00 0.00 35.96 3.14
75 76 8.518430 AAACACACATATACATGAAGGCATAA 57.482 30.769 0.00 0.00 35.96 1.90
76 77 7.496529 ACACACATATACATGAAGGCATAAC 57.503 36.000 0.00 0.00 35.96 1.89
77 78 7.053498 ACACACATATACATGAAGGCATAACA 58.947 34.615 0.00 0.00 35.96 2.41
78 79 7.012327 ACACACATATACATGAAGGCATAACAC 59.988 37.037 0.00 0.00 35.96 3.32
79 80 7.012232 CACACATATACATGAAGGCATAACACA 59.988 37.037 0.00 0.00 35.96 3.72
80 81 7.012327 ACACATATACATGAAGGCATAACACAC 59.988 37.037 0.00 0.00 35.96 3.82
81 82 6.202762 ACATATACATGAAGGCATAACACACG 59.797 38.462 0.00 0.00 35.96 4.49
82 83 2.778299 ACATGAAGGCATAACACACGT 58.222 42.857 0.00 0.00 32.27 4.49
83 84 2.483877 ACATGAAGGCATAACACACGTG 59.516 45.455 15.48 15.48 32.27 4.49
84 85 0.871722 TGAAGGCATAACACACGTGC 59.128 50.000 17.22 0.00 38.12 5.34
85 86 0.179225 GAAGGCATAACACACGTGCG 60.179 55.000 17.22 9.16 39.69 5.34
86 87 0.882927 AAGGCATAACACACGTGCGT 60.883 50.000 17.22 9.99 39.69 5.24
99 100 2.970609 CACGTGCGTGTAAATTTTCAGG 59.029 45.455 15.60 11.73 40.91 3.86
100 101 2.031508 ACGTGCGTGTAAATTTTCAGGG 60.032 45.455 16.11 5.79 0.00 4.45
101 102 2.224549 CGTGCGTGTAAATTTTCAGGGA 59.775 45.455 16.11 12.05 0.00 4.20
102 103 3.304123 CGTGCGTGTAAATTTTCAGGGAA 60.304 43.478 16.11 0.00 0.00 3.97
103 104 4.612943 GTGCGTGTAAATTTTCAGGGAAA 58.387 39.130 16.11 0.00 0.00 3.13
104 105 5.044558 GTGCGTGTAAATTTTCAGGGAAAA 58.955 37.500 16.11 6.60 44.04 2.29
105 106 5.520649 GTGCGTGTAAATTTTCAGGGAAAAA 59.479 36.000 16.11 0.00 43.32 1.94
106 107 6.201997 GTGCGTGTAAATTTTCAGGGAAAAAT 59.798 34.615 16.11 0.00 43.32 1.82
107 108 7.382759 GTGCGTGTAAATTTTCAGGGAAAAATA 59.617 33.333 16.11 3.20 43.32 1.40
108 109 7.926555 TGCGTGTAAATTTTCAGGGAAAAATAA 59.073 29.630 16.11 0.00 43.32 1.40
109 110 8.432359 GCGTGTAAATTTTCAGGGAAAAATAAG 58.568 33.333 16.11 0.00 43.32 1.73
110 111 9.471084 CGTGTAAATTTTCAGGGAAAAATAAGT 57.529 29.630 8.06 0.00 43.32 2.24
119 120 9.762933 TTTCAGGGAAAAATAAGTTGAAATGAG 57.237 29.630 0.00 0.00 30.67 2.90
120 121 7.895759 TCAGGGAAAAATAAGTTGAAATGAGG 58.104 34.615 0.00 0.00 0.00 3.86
121 122 7.728083 TCAGGGAAAAATAAGTTGAAATGAGGA 59.272 33.333 0.00 0.00 0.00 3.71
122 123 7.814587 CAGGGAAAAATAAGTTGAAATGAGGAC 59.185 37.037 0.00 0.00 0.00 3.85
123 124 7.730332 AGGGAAAAATAAGTTGAAATGAGGACT 59.270 33.333 0.00 0.00 0.00 3.85
124 125 7.814587 GGGAAAAATAAGTTGAAATGAGGACTG 59.185 37.037 0.00 0.00 0.00 3.51
125 126 8.360390 GGAAAAATAAGTTGAAATGAGGACTGT 58.640 33.333 0.00 0.00 0.00 3.55
126 127 9.185192 GAAAAATAAGTTGAAATGAGGACTGTG 57.815 33.333 0.00 0.00 0.00 3.66
127 128 5.886960 ATAAGTTGAAATGAGGACTGTGC 57.113 39.130 0.00 0.00 0.00 4.57
128 129 3.213206 AGTTGAAATGAGGACTGTGCA 57.787 42.857 1.24 0.00 0.00 4.57
129 130 3.554934 AGTTGAAATGAGGACTGTGCAA 58.445 40.909 1.24 0.00 0.00 4.08
130 131 3.953612 AGTTGAAATGAGGACTGTGCAAA 59.046 39.130 1.24 0.00 0.00 3.68
131 132 4.402155 AGTTGAAATGAGGACTGTGCAAAA 59.598 37.500 1.24 0.00 0.00 2.44
132 133 4.998671 TGAAATGAGGACTGTGCAAAAA 57.001 36.364 1.24 0.00 0.00 1.94
151 152 5.372343 AAAAAGACAAATCTGGGGCTTTT 57.628 34.783 0.00 0.00 35.69 2.27
152 153 5.372343 AAAAGACAAATCTGGGGCTTTTT 57.628 34.783 0.00 0.00 34.48 1.94
153 154 6.493189 AAAAGACAAATCTGGGGCTTTTTA 57.507 33.333 0.00 0.00 34.48 1.52
154 155 6.493189 AAAGACAAATCTGGGGCTTTTTAA 57.507 33.333 0.00 0.00 34.48 1.52
155 156 5.468540 AGACAAATCTGGGGCTTTTTAAC 57.531 39.130 0.00 0.00 32.29 2.01
156 157 4.898861 AGACAAATCTGGGGCTTTTTAACA 59.101 37.500 0.00 0.00 32.29 2.41
157 158 4.956085 ACAAATCTGGGGCTTTTTAACAC 58.044 39.130 0.00 0.00 0.00 3.32
158 159 4.407296 ACAAATCTGGGGCTTTTTAACACA 59.593 37.500 0.00 0.00 0.00 3.72
159 160 5.071653 ACAAATCTGGGGCTTTTTAACACAT 59.928 36.000 0.00 0.00 0.00 3.21
160 161 4.806640 ATCTGGGGCTTTTTAACACATG 57.193 40.909 0.00 0.00 0.00 3.21
161 162 3.838565 TCTGGGGCTTTTTAACACATGA 58.161 40.909 0.00 0.00 0.00 3.07
162 163 4.415596 TCTGGGGCTTTTTAACACATGAT 58.584 39.130 0.00 0.00 0.00 2.45
163 164 5.575157 TCTGGGGCTTTTTAACACATGATA 58.425 37.500 0.00 0.00 0.00 2.15
164 165 5.417580 TCTGGGGCTTTTTAACACATGATAC 59.582 40.000 0.00 0.00 0.00 2.24
165 166 5.329399 TGGGGCTTTTTAACACATGATACT 58.671 37.500 0.00 0.00 0.00 2.12
166 167 5.417580 TGGGGCTTTTTAACACATGATACTC 59.582 40.000 0.00 0.00 0.00 2.59
167 168 5.652452 GGGGCTTTTTAACACATGATACTCT 59.348 40.000 0.00 0.00 0.00 3.24
168 169 6.152831 GGGGCTTTTTAACACATGATACTCTT 59.847 38.462 0.00 0.00 0.00 2.85
169 170 7.251281 GGGCTTTTTAACACATGATACTCTTC 58.749 38.462 0.00 0.00 0.00 2.87
170 171 7.094377 GGGCTTTTTAACACATGATACTCTTCA 60.094 37.037 0.00 0.00 0.00 3.02
171 172 8.462016 GGCTTTTTAACACATGATACTCTTCAT 58.538 33.333 0.00 0.00 36.79 2.57
172 173 9.495754 GCTTTTTAACACATGATACTCTTCATC 57.504 33.333 0.00 0.00 34.09 2.92
173 174 9.994432 CTTTTTAACACATGATACTCTTCATCC 57.006 33.333 0.00 0.00 34.09 3.51
174 175 9.739276 TTTTTAACACATGATACTCTTCATCCT 57.261 29.630 0.00 0.00 34.09 3.24
175 176 8.948631 TTTAACACATGATACTCTTCATCCTC 57.051 34.615 0.00 0.00 34.09 3.71
176 177 6.805016 AACACATGATACTCTTCATCCTCT 57.195 37.500 0.00 0.00 34.09 3.69
177 178 6.403866 ACACATGATACTCTTCATCCTCTC 57.596 41.667 0.00 0.00 34.09 3.20
178 179 5.896106 ACACATGATACTCTTCATCCTCTCA 59.104 40.000 0.00 0.00 34.09 3.27
179 180 6.040729 ACACATGATACTCTTCATCCTCTCAG 59.959 42.308 0.00 0.00 34.09 3.35
180 181 5.539574 ACATGATACTCTTCATCCTCTCAGG 59.460 44.000 0.00 0.00 34.09 3.86
181 182 3.894427 TGATACTCTTCATCCTCTCAGGC 59.106 47.826 0.00 0.00 34.61 4.85
182 183 1.494960 ACTCTTCATCCTCTCAGGCC 58.505 55.000 0.00 0.00 34.61 5.19
183 184 1.273495 ACTCTTCATCCTCTCAGGCCA 60.273 52.381 5.01 0.00 34.61 5.36
184 185 2.048601 CTCTTCATCCTCTCAGGCCAT 58.951 52.381 5.01 0.00 34.61 4.40
185 186 1.767088 TCTTCATCCTCTCAGGCCATG 59.233 52.381 5.01 0.00 34.61 3.66
186 187 1.767088 CTTCATCCTCTCAGGCCATGA 59.233 52.381 5.01 5.02 34.61 3.07
187 188 1.883678 TCATCCTCTCAGGCCATGAA 58.116 50.000 5.01 0.00 37.52 2.57
188 189 2.415624 TCATCCTCTCAGGCCATGAAT 58.584 47.619 5.01 0.00 37.52 2.57
189 190 2.781757 TCATCCTCTCAGGCCATGAATT 59.218 45.455 5.01 0.00 37.52 2.17
190 191 3.203710 TCATCCTCTCAGGCCATGAATTT 59.796 43.478 5.01 0.00 37.52 1.82
191 192 3.008835 TCCTCTCAGGCCATGAATTTG 57.991 47.619 5.01 0.00 37.52 2.32
192 193 2.309755 TCCTCTCAGGCCATGAATTTGT 59.690 45.455 5.01 0.00 37.52 2.83
193 194 2.686915 CCTCTCAGGCCATGAATTTGTC 59.313 50.000 5.01 0.00 37.52 3.18
194 195 3.618351 CTCTCAGGCCATGAATTTGTCT 58.382 45.455 5.01 0.00 37.52 3.41
195 196 4.015084 CTCTCAGGCCATGAATTTGTCTT 58.985 43.478 5.01 0.00 37.52 3.01
196 197 4.410099 TCTCAGGCCATGAATTTGTCTTT 58.590 39.130 5.01 0.00 37.52 2.52
197 198 4.834496 TCTCAGGCCATGAATTTGTCTTTT 59.166 37.500 5.01 0.00 37.52 2.27
198 199 5.305128 TCTCAGGCCATGAATTTGTCTTTTT 59.695 36.000 5.01 0.00 37.52 1.94
199 200 5.540911 TCAGGCCATGAATTTGTCTTTTTC 58.459 37.500 5.01 0.00 34.02 2.29
200 201 5.070180 TCAGGCCATGAATTTGTCTTTTTCA 59.930 36.000 5.01 0.00 34.02 2.69
201 202 5.935789 CAGGCCATGAATTTGTCTTTTTCAT 59.064 36.000 5.01 0.00 39.92 2.57
202 203 7.039152 TCAGGCCATGAATTTGTCTTTTTCATA 60.039 33.333 5.01 0.00 37.86 2.15
203 204 7.603404 CAGGCCATGAATTTGTCTTTTTCATAA 59.397 33.333 5.01 0.00 37.86 1.90
204 205 8.156165 AGGCCATGAATTTGTCTTTTTCATAAA 58.844 29.630 5.01 0.00 37.86 1.40
205 206 8.445493 GGCCATGAATTTGTCTTTTTCATAAAG 58.555 33.333 0.00 0.00 37.86 1.85
206 207 8.445493 GCCATGAATTTGTCTTTTTCATAAAGG 58.555 33.333 0.00 0.00 37.86 3.11
207 208 9.492973 CCATGAATTTGTCTTTTTCATAAAGGT 57.507 29.630 0.00 0.00 37.86 3.50
210 211 9.528018 TGAATTTGTCTTTTTCATAAAGGTCAC 57.472 29.630 0.00 0.00 0.00 3.67
211 212 9.528018 GAATTTGTCTTTTTCATAAAGGTCACA 57.472 29.630 0.00 0.00 0.00 3.58
214 215 9.883142 TTTGTCTTTTTCATAAAGGTCACATTT 57.117 25.926 0.00 0.00 0.00 2.32
215 216 9.528018 TTGTCTTTTTCATAAAGGTCACATTTC 57.472 29.630 0.00 0.00 0.00 2.17
216 217 8.690884 TGTCTTTTTCATAAAGGTCACATTTCA 58.309 29.630 0.00 0.00 0.00 2.69
217 218 9.528018 GTCTTTTTCATAAAGGTCACATTTCAA 57.472 29.630 0.00 0.00 0.00 2.69
218 219 9.528018 TCTTTTTCATAAAGGTCACATTTCAAC 57.472 29.630 0.00 0.00 0.00 3.18
219 220 7.922505 TTTTCATAAAGGTCACATTTCAACG 57.077 32.000 0.00 0.00 0.00 4.10
220 221 6.627395 TTCATAAAGGTCACATTTCAACGT 57.373 33.333 0.00 0.00 0.00 3.99
221 222 6.627395 TCATAAAGGTCACATTTCAACGTT 57.373 33.333 0.00 0.00 0.00 3.99
222 223 7.033530 TCATAAAGGTCACATTTCAACGTTT 57.966 32.000 0.00 0.00 35.75 3.60
223 224 7.484975 TCATAAAGGTCACATTTCAACGTTTT 58.515 30.769 0.00 0.00 34.15 2.43
224 225 7.976734 TCATAAAGGTCACATTTCAACGTTTTT 59.023 29.630 0.00 0.00 34.15 1.94
225 226 6.641176 AAAGGTCACATTTCAACGTTTTTC 57.359 33.333 0.00 0.00 29.50 2.29
226 227 5.317733 AGGTCACATTTCAACGTTTTTCA 57.682 34.783 0.00 0.00 0.00 2.69
227 228 5.901552 AGGTCACATTTCAACGTTTTTCAT 58.098 33.333 0.00 0.00 0.00 2.57
228 229 6.337356 AGGTCACATTTCAACGTTTTTCATT 58.663 32.000 0.00 0.00 0.00 2.57
229 230 6.475402 AGGTCACATTTCAACGTTTTTCATTC 59.525 34.615 0.00 0.00 0.00 2.67
230 231 6.475402 GGTCACATTTCAACGTTTTTCATTCT 59.525 34.615 0.00 0.00 0.00 2.40
231 232 7.646130 GGTCACATTTCAACGTTTTTCATTCTA 59.354 33.333 0.00 0.00 0.00 2.10
232 233 9.015577 GTCACATTTCAACGTTTTTCATTCTAA 57.984 29.630 0.00 0.00 0.00 2.10
233 234 9.574458 TCACATTTCAACGTTTTTCATTCTAAA 57.426 25.926 0.00 0.00 0.00 1.85
263 264 9.719355 TTTCACACATAGACATAACATACTTGT 57.281 29.630 0.00 0.00 37.82 3.16
265 266 9.719355 TCACACATAGACATAACATACTTGTTT 57.281 29.630 0.00 0.00 43.57 2.83
272 273 8.615878 AGACATAACATACTTGTTTACTTGCA 57.384 30.769 0.00 0.00 43.57 4.08
273 274 8.504005 AGACATAACATACTTGTTTACTTGCAC 58.496 33.333 0.00 0.00 43.57 4.57
274 275 8.160521 ACATAACATACTTGTTTACTTGCACA 57.839 30.769 0.00 0.00 43.57 4.57
275 276 8.625651 ACATAACATACTTGTTTACTTGCACAA 58.374 29.630 0.00 0.00 43.57 3.33
276 277 9.624697 CATAACATACTTGTTTACTTGCACAAT 57.375 29.630 0.00 0.00 43.57 2.71
278 279 8.940768 AACATACTTGTTTACTTGCACAATTT 57.059 26.923 0.00 0.00 43.57 1.82
279 280 8.940768 ACATACTTGTTTACTTGCACAATTTT 57.059 26.923 0.00 0.00 32.50 1.82
280 281 9.377312 ACATACTTGTTTACTTGCACAATTTTT 57.623 25.926 0.00 0.00 32.50 1.94
337 338 9.964303 ATTTTGATTTGTTTTCATAAAAAGGCC 57.036 25.926 0.00 0.00 35.10 5.19
338 339 8.744568 TTTGATTTGTTTTCATAAAAAGGCCT 57.255 26.923 0.00 0.00 35.10 5.19
339 340 7.961325 TGATTTGTTTTCATAAAAAGGCCTC 57.039 32.000 5.23 0.00 35.10 4.70
340 341 6.934083 TGATTTGTTTTCATAAAAAGGCCTCC 59.066 34.615 5.23 0.00 35.10 4.30
341 342 4.513198 TGTTTTCATAAAAAGGCCTCCG 57.487 40.909 5.23 0.00 35.10 4.63
342 343 3.892588 TGTTTTCATAAAAAGGCCTCCGT 59.107 39.130 5.23 0.00 35.10 4.69
343 344 4.234574 GTTTTCATAAAAAGGCCTCCGTG 58.765 43.478 5.23 1.11 35.10 4.94
344 345 2.122783 TCATAAAAAGGCCTCCGTGG 57.877 50.000 5.23 0.00 39.35 4.94
345 346 6.356234 TTTTCATAAAAAGGCCTCCGTGGC 62.356 45.833 5.23 8.02 43.83 5.01
362 363 4.016706 CTCCCGGGAGCCAAACGT 62.017 66.667 36.90 0.00 35.31 3.99
363 364 3.952628 CTCCCGGGAGCCAAACGTC 62.953 68.421 36.90 0.00 35.31 4.34
367 368 4.699522 GGGAGCCAAACGTCCGCT 62.700 66.667 3.87 3.87 33.13 5.52
368 369 3.119096 GGAGCCAAACGTCCGCTC 61.119 66.667 18.28 18.28 46.67 5.03
369 370 2.048127 GAGCCAAACGTCCGCTCT 60.048 61.111 18.90 1.58 44.52 4.09
370 371 2.048127 AGCCAAACGTCCGCTCTC 60.048 61.111 0.00 0.00 0.00 3.20
397 398 2.025605 GGGGTTCTAGTTAAGTTGGGGG 60.026 54.545 0.00 0.00 0.00 5.40
400 401 4.448200 GGGTTCTAGTTAAGTTGGGGGTTT 60.448 45.833 0.00 0.00 0.00 3.27
407 408 4.292836 AGTTAAGTTGGGGGTTTGGCTATA 59.707 41.667 0.00 0.00 0.00 1.31
416 417 6.503944 TGGGGGTTTGGCTATATTTTAGAAA 58.496 36.000 0.00 0.00 0.00 2.52
451 452 0.904649 GCCATGGGGAAAAAGGAAGG 59.095 55.000 15.13 0.00 35.59 3.46
536 551 9.689976 TGGTGTTTTAATCTAAAATGTCACATG 57.310 29.630 0.00 0.00 39.56 3.21
710 752 1.683441 CGGTACTTTCAGGGCCCTT 59.317 57.895 26.10 10.50 0.00 3.95
713 755 2.092592 CGGTACTTTCAGGGCCCTTAAT 60.093 50.000 26.10 9.53 0.00 1.40
717 759 3.701664 ACTTTCAGGGCCCTTAATCAAG 58.298 45.455 26.10 20.63 0.00 3.02
759 812 1.399215 CGCGTGTTTAAACCGCAGAAT 60.399 47.619 33.12 0.00 43.69 2.40
760 813 1.976045 GCGTGTTTAAACCGCAGAATG 59.024 47.619 31.37 15.21 43.30 2.67
878 932 2.487762 CTGCGACCCAATTTTAGCTCAA 59.512 45.455 0.00 0.00 0.00 3.02
954 1014 3.834799 GCTACCGTCCCGTCCCAG 61.835 72.222 0.00 0.00 0.00 4.45
1839 1899 2.428071 GACACCACCGACGACGTC 60.428 66.667 18.04 18.04 37.88 4.34
2326 2386 2.543802 CGCTCGCCGATCCTCTACA 61.544 63.158 0.00 0.00 40.02 2.74
2598 2658 4.971125 GAGGGGATGCGCTACGGC 62.971 72.222 9.73 0.00 0.00 5.68
2731 2791 0.539438 CCTCCTCATCCTCTCCCTCG 60.539 65.000 0.00 0.00 0.00 4.63
2751 2811 1.689233 CTCCTTCATCCCCGACCCA 60.689 63.158 0.00 0.00 0.00 4.51
2827 2888 2.739932 GCCTACTACCTCGTCTACGTCA 60.740 54.545 0.00 0.00 40.80 4.35
2836 2897 0.098200 CGTCTACGTCATCGCCAAGA 59.902 55.000 0.00 0.00 41.18 3.02
2848 2909 2.594303 CCAAGAACGTGCCCAGCA 60.594 61.111 0.00 0.00 35.60 4.41
2881 2942 2.028112 GTCAAGATACAGTGACCCTGCA 60.028 50.000 0.00 0.00 45.68 4.41
2882 2943 2.840038 TCAAGATACAGTGACCCTGCAT 59.160 45.455 0.00 0.00 45.68 3.96
2883 2944 2.941064 CAAGATACAGTGACCCTGCATG 59.059 50.000 0.00 0.00 45.68 4.06
2884 2945 1.134280 AGATACAGTGACCCTGCATGC 60.134 52.381 11.82 11.82 45.68 4.06
2885 2946 0.462581 ATACAGTGACCCTGCATGCG 60.463 55.000 14.09 7.87 45.68 4.73
2886 2947 3.807538 CAGTGACCCTGCATGCGC 61.808 66.667 14.09 0.00 33.59 6.09
2890 2951 4.465512 GACCCTGCATGCGCGTTG 62.466 66.667 14.09 7.45 42.97 4.10
2893 2954 4.409218 CCTGCATGCGCGTTGCTT 62.409 61.111 28.18 1.74 46.63 3.91
2897 2958 3.169924 CATGCGCGTTGCTTGCTG 61.170 61.111 8.43 0.00 46.63 4.41
2903 2964 3.659092 CGTTGCTTGCTGCGGGAA 61.659 61.111 0.00 0.00 46.63 3.97
2904 2965 2.727544 GTTGCTTGCTGCGGGAAA 59.272 55.556 0.00 0.00 46.63 3.13
2905 2966 1.067250 GTTGCTTGCTGCGGGAAAA 59.933 52.632 0.00 0.00 46.63 2.29
2906 2967 0.529555 GTTGCTTGCTGCGGGAAAAA 60.530 50.000 0.00 0.00 46.63 1.94
2941 3002 7.158099 AGCACATAAATTTGAACTACCTTCC 57.842 36.000 0.00 0.00 0.00 3.46
2942 3003 6.948309 AGCACATAAATTTGAACTACCTTCCT 59.052 34.615 0.00 0.00 0.00 3.36
2943 3004 8.107095 AGCACATAAATTTGAACTACCTTCCTA 58.893 33.333 0.00 0.00 0.00 2.94
2944 3005 8.736244 GCACATAAATTTGAACTACCTTCCTAA 58.264 33.333 0.00 0.00 0.00 2.69
2986 3047 8.577296 AGTGTACAATAGCTATATGTCAATCGT 58.423 33.333 18.65 5.43 0.00 3.73
3001 3062 3.813166 TCAATCGTCTGGTTTTTGGAGTC 59.187 43.478 0.00 0.00 0.00 3.36
3003 3064 1.409790 TCGTCTGGTTTTTGGAGTCGA 59.590 47.619 0.00 0.00 0.00 4.20
3004 3065 2.036733 TCGTCTGGTTTTTGGAGTCGAT 59.963 45.455 0.00 0.00 0.00 3.59
3005 3066 2.806244 CGTCTGGTTTTTGGAGTCGATT 59.194 45.455 0.00 0.00 0.00 3.34
3007 3068 4.261031 CGTCTGGTTTTTGGAGTCGATTTT 60.261 41.667 0.00 0.00 0.00 1.82
3008 3069 5.588240 GTCTGGTTTTTGGAGTCGATTTTT 58.412 37.500 0.00 0.00 0.00 1.94
3036 3107 1.004161 TGGATCGGGCTTTGTGATTCA 59.996 47.619 0.00 0.00 0.00 2.57
3071 3142 3.869065 TCTCTTTCTTTGGTGTGAACGT 58.131 40.909 0.00 0.00 0.00 3.99
3081 3152 1.677052 GGTGTGAACGTTTTTGGGCTA 59.323 47.619 0.46 0.00 0.00 3.93
3083 3154 2.614983 GTGTGAACGTTTTTGGGCTAGA 59.385 45.455 0.46 0.00 0.00 2.43
3086 3157 3.059120 GTGAACGTTTTTGGGCTAGACTC 60.059 47.826 0.46 0.00 0.00 3.36
3099 3170 2.783990 GCTAGACTCGTTTCGTCGACTC 60.784 54.545 14.70 1.34 36.53 3.36
3102 3173 0.942962 ACTCGTTTCGTCGACTCACT 59.057 50.000 14.70 0.00 35.91 3.41
3130 3202 5.414789 TTTCTGGGTCAGTCGATTTGATA 57.585 39.130 5.96 0.00 32.61 2.15
3140 3213 2.731976 GTCGATTTGATATGGGCTCGTC 59.268 50.000 0.00 0.00 0.00 4.20
3141 3214 2.628178 TCGATTTGATATGGGCTCGTCT 59.372 45.455 0.00 0.00 0.00 4.18
3144 3217 0.249447 TTGATATGGGCTCGTCTGCG 60.249 55.000 0.00 0.00 39.92 5.18
3146 3219 2.427540 GATATGGGCTCGTCTGCGCT 62.428 60.000 9.73 0.00 44.66 5.92
3152 3225 3.184683 CTCGTCTGCGCTTCTGCC 61.185 66.667 9.73 0.00 38.14 4.85
3153 3226 4.742201 TCGTCTGCGCTTCTGCCC 62.742 66.667 9.73 0.00 38.14 5.36
3156 3229 4.314440 TCTGCGCTTCTGCCCGTT 62.314 61.111 9.73 0.00 35.36 4.44
3157 3230 2.434185 CTGCGCTTCTGCCCGTTA 60.434 61.111 9.73 0.00 35.36 3.18
3161 3244 1.574702 GCGCTTCTGCCCGTTAAGTT 61.575 55.000 0.00 0.00 35.36 2.66
3177 3260 5.388111 GTTAAGTTTGACCCGTTATTCTGC 58.612 41.667 0.00 0.00 0.00 4.26
3213 3313 2.349886 GACTGCTTGTTGCCTTATCTCG 59.650 50.000 0.00 0.00 42.00 4.04
3223 3324 1.497161 CCTTATCTCGTCCCCCACTT 58.503 55.000 0.00 0.00 0.00 3.16
3229 3330 1.935327 CTCGTCCCCCACTTCTCGTC 61.935 65.000 0.00 0.00 0.00 4.20
3234 3335 1.374758 CCCCACTTCTCGTCTGTGC 60.375 63.158 0.00 0.00 0.00 4.57
3255 3356 1.822371 GGTCAGTCACTCCCTTCTCTC 59.178 57.143 0.00 0.00 0.00 3.20
3259 3360 3.333980 TCAGTCACTCCCTTCTCTCCTTA 59.666 47.826 0.00 0.00 0.00 2.69
3268 3369 2.099263 CCTTCTCTCCTTATTCGTCGCA 59.901 50.000 0.00 0.00 0.00 5.10
3319 3420 1.395954 GGGTTAGTCGATTTCGTTGCC 59.604 52.381 0.00 0.00 40.80 4.52
3322 3423 3.181523 GGTTAGTCGATTTCGTTGCCTTC 60.182 47.826 0.00 0.00 40.80 3.46
3340 3441 2.818751 TCTGTCTCTTCCTCCTCTCC 57.181 55.000 0.00 0.00 0.00 3.71
3347 3448 0.749649 CTTCCTCCTCTCCGATGGTG 59.250 60.000 0.00 0.00 0.00 4.17
3350 3451 1.760086 CTCCTCTCCGATGGTGCCT 60.760 63.158 0.00 0.00 0.00 4.75
3420 3523 3.903467 AGGTTTCTTTTGCTCTGGTCTT 58.097 40.909 0.00 0.00 0.00 3.01
3421 3524 4.281657 AGGTTTCTTTTGCTCTGGTCTTT 58.718 39.130 0.00 0.00 0.00 2.52
3443 3546 0.396435 TTGGTGCTCGGATTCAGTGT 59.604 50.000 0.00 0.00 0.00 3.55
3460 3563 0.178846 TGTCCCCCTTCTTGGATCCA 60.179 55.000 11.44 11.44 38.35 3.41
3528 3632 8.530269 TCGTCTTTTTGATTAGTTCTAGTTCC 57.470 34.615 0.00 0.00 0.00 3.62
3531 3635 8.722394 GTCTTTTTGATTAGTTCTAGTTCCTGG 58.278 37.037 0.00 0.00 0.00 4.45
3552 3657 3.317150 GTTTAGGTTTGATGCTTGGTGC 58.683 45.455 0.00 0.00 43.25 5.01
3573 3678 3.376218 TGCGCCTGTGCAAATTTTT 57.624 42.105 4.18 0.00 43.02 1.94
3574 3679 1.216122 TGCGCCTGTGCAAATTTTTC 58.784 45.000 4.18 0.00 43.02 2.29
3586 3691 6.093771 TGTGCAAATTTTTCTTTTCAGCATGT 59.906 30.769 0.00 0.00 37.40 3.21
3590 3695 7.254522 GCAAATTTTTCTTTTCAGCATGTGAGA 60.255 33.333 0.00 0.00 36.21 3.27
3652 8808 4.009675 TGTGGATTGTGGAGTAAGATTGC 58.990 43.478 0.00 0.00 0.00 3.56
3660 8816 3.182572 GTGGAGTAAGATTGCTTATCGCG 59.817 47.826 0.00 0.00 43.27 5.87
3661 8817 3.181479 TGGAGTAAGATTGCTTATCGCGT 60.181 43.478 5.77 0.00 43.27 6.01
3681 8837 3.066760 CGTGTGCTACTGACTGGATATCA 59.933 47.826 4.83 0.00 0.00 2.15
3693 8849 7.049799 TGACTGGATATCAAACATGTCGATA 57.950 36.000 16.22 16.22 0.00 2.92
3703 8859 4.649088 AACATGTCGATATTGAGTCGGA 57.351 40.909 0.00 0.00 39.45 4.55
3731 8887 2.418746 CCAGGACCGAGGTGATTAACAG 60.419 54.545 0.00 0.00 0.00 3.16
3745 8901 4.883585 TGATTAACAGCATCAAGGATGACC 59.116 41.667 10.24 0.00 42.09 4.02
3746 8902 2.134789 AACAGCATCAAGGATGACCC 57.865 50.000 10.24 0.00 42.09 4.46
3747 8903 0.994247 ACAGCATCAAGGATGACCCA 59.006 50.000 10.24 0.00 42.09 4.51
3748 8904 1.567649 ACAGCATCAAGGATGACCCAT 59.432 47.619 10.24 0.00 42.09 4.00
3749 8905 2.779430 ACAGCATCAAGGATGACCCATA 59.221 45.455 10.24 0.00 42.09 2.74
3750 8906 3.396946 ACAGCATCAAGGATGACCCATAT 59.603 43.478 10.24 0.00 42.09 1.78
3751 8907 3.756963 CAGCATCAAGGATGACCCATATG 59.243 47.826 10.24 0.00 42.09 1.78
3752 8908 3.087031 GCATCAAGGATGACCCATATGG 58.913 50.000 15.41 15.41 42.09 2.74
3753 8909 2.957402 TCAAGGATGACCCATATGGC 57.043 50.000 16.97 4.27 37.83 4.40
3754 8910 2.421725 TCAAGGATGACCCATATGGCT 58.578 47.619 16.97 1.99 37.83 4.75
3755 8911 2.373169 TCAAGGATGACCCATATGGCTC 59.627 50.000 16.97 13.08 37.83 4.70
3756 8912 2.374504 CAAGGATGACCCATATGGCTCT 59.625 50.000 16.97 2.78 37.83 4.09
3757 8913 3.567375 AGGATGACCCATATGGCTCTA 57.433 47.619 16.97 4.21 37.83 2.43
3758 8914 4.085854 AGGATGACCCATATGGCTCTAT 57.914 45.455 16.97 8.61 37.83 1.98
3759 8915 4.036518 AGGATGACCCATATGGCTCTATC 58.963 47.826 16.97 15.54 37.83 2.08
3760 8916 3.776969 GGATGACCCATATGGCTCTATCA 59.223 47.826 16.97 13.34 37.83 2.15
3761 8917 4.411540 GGATGACCCATATGGCTCTATCAT 59.588 45.833 16.97 16.94 37.83 2.45
3762 8918 5.454471 GGATGACCCATATGGCTCTATCATC 60.454 48.000 25.00 25.00 40.19 2.92
3763 8919 3.448660 TGACCCATATGGCTCTATCATCG 59.551 47.826 16.97 1.05 37.83 3.84
3764 8920 3.701542 GACCCATATGGCTCTATCATCGA 59.298 47.826 16.97 0.00 37.83 3.59
3765 8921 4.096681 ACCCATATGGCTCTATCATCGAA 58.903 43.478 16.97 0.00 37.83 3.71
3766 8922 4.161189 ACCCATATGGCTCTATCATCGAAG 59.839 45.833 16.97 0.00 37.83 3.79
3767 8923 4.403752 CCCATATGGCTCTATCATCGAAGA 59.596 45.833 16.97 0.00 45.75 2.87
3768 8924 5.451659 CCCATATGGCTCTATCATCGAAGAG 60.452 48.000 16.97 7.38 43.63 2.85
3769 8925 5.451659 CCATATGGCTCTATCATCGAAGAGG 60.452 48.000 9.29 1.44 43.63 3.69
3772 8928 3.591196 GCTCTATCATCGAAGAGGCAT 57.409 47.619 12.56 0.00 43.63 4.40
3773 8929 3.924144 GCTCTATCATCGAAGAGGCATT 58.076 45.455 12.56 0.00 43.63 3.56
3774 8930 3.679025 GCTCTATCATCGAAGAGGCATTG 59.321 47.826 12.56 0.00 43.63 2.82
3775 8931 3.657634 TCTATCATCGAAGAGGCATTGC 58.342 45.455 0.00 0.00 43.63 3.56
3776 8932 2.336945 ATCATCGAAGAGGCATTGCA 57.663 45.000 11.39 0.00 43.63 4.08
3777 8933 2.112380 TCATCGAAGAGGCATTGCAA 57.888 45.000 11.39 0.00 43.63 4.08
3778 8934 1.739466 TCATCGAAGAGGCATTGCAAC 59.261 47.619 11.39 3.67 43.63 4.17
3779 8935 1.741706 CATCGAAGAGGCATTGCAACT 59.258 47.619 11.39 6.02 43.63 3.16
3780 8936 1.159285 TCGAAGAGGCATTGCAACTG 58.841 50.000 11.39 2.76 0.00 3.16
3781 8937 0.455633 CGAAGAGGCATTGCAACTGC 60.456 55.000 19.37 19.37 42.50 4.40
3782 8938 0.886563 GAAGAGGCATTGCAACTGCT 59.113 50.000 23.69 14.73 42.66 4.24
3783 8939 0.601558 AAGAGGCATTGCAACTGCTG 59.398 50.000 23.69 12.07 42.66 4.41
3793 8949 3.336122 CAACTGCTGCTCCCTCTTT 57.664 52.632 0.00 0.00 0.00 2.52
3794 8950 1.613836 CAACTGCTGCTCCCTCTTTT 58.386 50.000 0.00 0.00 0.00 2.27
3795 8951 2.783135 CAACTGCTGCTCCCTCTTTTA 58.217 47.619 0.00 0.00 0.00 1.52
3796 8952 3.149196 CAACTGCTGCTCCCTCTTTTAA 58.851 45.455 0.00 0.00 0.00 1.52
3797 8953 3.508845 ACTGCTGCTCCCTCTTTTAAA 57.491 42.857 0.00 0.00 0.00 1.52
3798 8954 3.149981 ACTGCTGCTCCCTCTTTTAAAC 58.850 45.455 0.00 0.00 0.00 2.01
3799 8955 3.149196 CTGCTGCTCCCTCTTTTAAACA 58.851 45.455 0.00 0.00 0.00 2.83
3800 8956 3.760684 CTGCTGCTCCCTCTTTTAAACAT 59.239 43.478 0.00 0.00 0.00 2.71
3801 8957 4.151883 TGCTGCTCCCTCTTTTAAACATT 58.848 39.130 0.00 0.00 0.00 2.71
3802 8958 4.022068 TGCTGCTCCCTCTTTTAAACATTG 60.022 41.667 0.00 0.00 0.00 2.82
3803 8959 4.488879 CTGCTCCCTCTTTTAAACATTGC 58.511 43.478 0.00 0.00 0.00 3.56
3804 8960 3.258123 TGCTCCCTCTTTTAAACATTGCC 59.742 43.478 0.00 0.00 0.00 4.52
3805 8961 3.258123 GCTCCCTCTTTTAAACATTGCCA 59.742 43.478 0.00 0.00 0.00 4.92
3806 8962 4.619160 GCTCCCTCTTTTAAACATTGCCAG 60.619 45.833 0.00 0.00 0.00 4.85
3807 8963 4.479158 TCCCTCTTTTAAACATTGCCAGT 58.521 39.130 0.00 0.00 0.00 4.00
3808 8964 4.898861 TCCCTCTTTTAAACATTGCCAGTT 59.101 37.500 0.00 0.00 0.00 3.16
3809 8965 4.990426 CCCTCTTTTAAACATTGCCAGTTG 59.010 41.667 0.00 0.00 0.00 3.16
3810 8966 4.990426 CCTCTTTTAAACATTGCCAGTTGG 59.010 41.667 0.00 0.00 38.53 3.77
3811 8967 5.453198 CCTCTTTTAAACATTGCCAGTTGGT 60.453 40.000 0.00 0.00 37.57 3.67
3812 8968 5.983540 TCTTTTAAACATTGCCAGTTGGTT 58.016 33.333 0.00 0.00 37.57 3.67
3813 8969 7.113658 TCTTTTAAACATTGCCAGTTGGTTA 57.886 32.000 0.00 0.00 37.57 2.85
3814 8970 7.206687 TCTTTTAAACATTGCCAGTTGGTTAG 58.793 34.615 0.00 0.00 37.57 2.34
3815 8971 6.472686 TTTAAACATTGCCAGTTGGTTAGT 57.527 33.333 0.00 0.00 37.57 2.24
3816 8972 4.584327 AAACATTGCCAGTTGGTTAGTC 57.416 40.909 0.00 0.00 37.57 2.59
3817 8973 3.222173 ACATTGCCAGTTGGTTAGTCA 57.778 42.857 0.00 0.00 37.57 3.41
3818 8974 3.766545 ACATTGCCAGTTGGTTAGTCAT 58.233 40.909 0.00 0.00 37.57 3.06
3819 8975 3.758554 ACATTGCCAGTTGGTTAGTCATC 59.241 43.478 0.00 0.00 37.57 2.92
3820 8976 3.788227 TTGCCAGTTGGTTAGTCATCT 57.212 42.857 0.00 0.00 37.57 2.90
3821 8977 3.334583 TGCCAGTTGGTTAGTCATCTC 57.665 47.619 0.00 0.00 37.57 2.75
3822 8978 2.027192 TGCCAGTTGGTTAGTCATCTCC 60.027 50.000 0.00 0.00 37.57 3.71
3823 8979 2.237392 GCCAGTTGGTTAGTCATCTCCT 59.763 50.000 0.00 0.00 37.57 3.69
3824 8980 3.307762 GCCAGTTGGTTAGTCATCTCCTT 60.308 47.826 0.00 0.00 37.57 3.36
3825 8981 4.807643 GCCAGTTGGTTAGTCATCTCCTTT 60.808 45.833 0.00 0.00 37.57 3.11
3826 8982 5.316987 CCAGTTGGTTAGTCATCTCCTTTT 58.683 41.667 0.00 0.00 0.00 2.27
3827 8983 5.770162 CCAGTTGGTTAGTCATCTCCTTTTT 59.230 40.000 0.00 0.00 0.00 1.94
3828 8984 6.940298 CCAGTTGGTTAGTCATCTCCTTTTTA 59.060 38.462 0.00 0.00 0.00 1.52
3829 8985 7.119846 CCAGTTGGTTAGTCATCTCCTTTTTAG 59.880 40.741 0.00 0.00 0.00 1.85
3830 8986 7.661847 CAGTTGGTTAGTCATCTCCTTTTTAGT 59.338 37.037 0.00 0.00 0.00 2.24
3831 8987 7.878644 AGTTGGTTAGTCATCTCCTTTTTAGTC 59.121 37.037 0.00 0.00 0.00 2.59
3832 8988 7.311092 TGGTTAGTCATCTCCTTTTTAGTCA 57.689 36.000 0.00 0.00 0.00 3.41
3833 8989 7.918076 TGGTTAGTCATCTCCTTTTTAGTCAT 58.082 34.615 0.00 0.00 0.00 3.06
3834 8990 7.824289 TGGTTAGTCATCTCCTTTTTAGTCATG 59.176 37.037 0.00 0.00 0.00 3.07
3835 8991 7.824779 GGTTAGTCATCTCCTTTTTAGTCATGT 59.175 37.037 0.00 0.00 0.00 3.21
3836 8992 8.874816 GTTAGTCATCTCCTTTTTAGTCATGTC 58.125 37.037 0.00 0.00 0.00 3.06
3837 8993 7.251321 AGTCATCTCCTTTTTAGTCATGTCT 57.749 36.000 0.00 0.00 0.00 3.41
3838 8994 7.327214 AGTCATCTCCTTTTTAGTCATGTCTC 58.673 38.462 0.00 0.00 0.00 3.36
3839 8995 7.038729 AGTCATCTCCTTTTTAGTCATGTCTCA 60.039 37.037 0.00 0.00 0.00 3.27
3840 8996 7.277539 GTCATCTCCTTTTTAGTCATGTCTCAG 59.722 40.741 0.00 0.00 0.00 3.35
3841 8997 6.672266 TCTCCTTTTTAGTCATGTCTCAGT 57.328 37.500 0.00 0.00 0.00 3.41
3842 8998 7.067496 TCTCCTTTTTAGTCATGTCTCAGTT 57.933 36.000 0.00 0.00 0.00 3.16
3843 8999 6.931281 TCTCCTTTTTAGTCATGTCTCAGTTG 59.069 38.462 0.00 0.00 0.00 3.16
3844 9000 5.997746 TCCTTTTTAGTCATGTCTCAGTTGG 59.002 40.000 0.00 0.00 0.00 3.77
3845 9001 5.765182 CCTTTTTAGTCATGTCTCAGTTGGT 59.235 40.000 0.00 0.00 0.00 3.67
3846 9002 6.263168 CCTTTTTAGTCATGTCTCAGTTGGTT 59.737 38.462 0.00 0.00 0.00 3.67
3847 9003 6.618287 TTTTAGTCATGTCTCAGTTGGTTG 57.382 37.500 0.00 0.00 0.00 3.77
3848 9004 2.498167 AGTCATGTCTCAGTTGGTTGC 58.502 47.619 0.00 0.00 0.00 4.17
3849 9005 2.158769 AGTCATGTCTCAGTTGGTTGCA 60.159 45.455 0.00 0.00 0.00 4.08
3850 9006 2.031682 GTCATGTCTCAGTTGGTTGCAC 60.032 50.000 0.00 0.00 0.00 4.57
3851 9007 2.158769 TCATGTCTCAGTTGGTTGCACT 60.159 45.455 0.00 0.00 0.00 4.40
3852 9008 2.418368 TGTCTCAGTTGGTTGCACTT 57.582 45.000 0.00 0.00 0.00 3.16
3853 9009 2.722094 TGTCTCAGTTGGTTGCACTTT 58.278 42.857 0.00 0.00 0.00 2.66
3854 9010 3.088532 TGTCTCAGTTGGTTGCACTTTT 58.911 40.909 0.00 0.00 0.00 2.27
3855 9011 3.509575 TGTCTCAGTTGGTTGCACTTTTT 59.490 39.130 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 7.225784 TGCCTTCATGTATATGTGTGTTTTT 57.774 32.000 0.00 0.00 35.73 1.94
49 50 6.832520 TGCCTTCATGTATATGTGTGTTTT 57.167 33.333 0.00 0.00 35.73 2.43
50 51 8.405531 GTTATGCCTTCATGTATATGTGTGTTT 58.594 33.333 0.00 0.00 35.73 2.83
51 52 7.555914 TGTTATGCCTTCATGTATATGTGTGTT 59.444 33.333 0.00 0.00 35.73 3.32
52 53 7.012327 GTGTTATGCCTTCATGTATATGTGTGT 59.988 37.037 0.00 0.00 35.73 3.72
53 54 7.012232 TGTGTTATGCCTTCATGTATATGTGTG 59.988 37.037 0.00 0.00 35.73 3.82
54 55 7.012327 GTGTGTTATGCCTTCATGTATATGTGT 59.988 37.037 0.00 0.00 35.73 3.72
55 56 7.355017 GTGTGTTATGCCTTCATGTATATGTG 58.645 38.462 0.00 0.00 35.73 3.21
56 57 6.202762 CGTGTGTTATGCCTTCATGTATATGT 59.797 38.462 0.00 0.00 35.73 2.29
57 58 6.202762 ACGTGTGTTATGCCTTCATGTATATG 59.797 38.462 0.00 0.00 34.22 1.78
58 59 6.202762 CACGTGTGTTATGCCTTCATGTATAT 59.797 38.462 7.58 0.00 34.22 0.86
59 60 5.522097 CACGTGTGTTATGCCTTCATGTATA 59.478 40.000 7.58 0.00 34.22 1.47
60 61 4.332543 CACGTGTGTTATGCCTTCATGTAT 59.667 41.667 7.58 0.00 34.22 2.29
61 62 3.682377 CACGTGTGTTATGCCTTCATGTA 59.318 43.478 7.58 0.00 34.22 2.29
62 63 2.483877 CACGTGTGTTATGCCTTCATGT 59.516 45.455 7.58 0.00 34.22 3.21
63 64 2.728846 GCACGTGTGTTATGCCTTCATG 60.729 50.000 18.38 0.00 34.22 3.07
64 65 1.468520 GCACGTGTGTTATGCCTTCAT 59.531 47.619 18.38 0.00 36.73 2.57
65 66 0.871722 GCACGTGTGTTATGCCTTCA 59.128 50.000 18.38 0.00 33.06 3.02
66 67 0.179225 CGCACGTGTGTTATGCCTTC 60.179 55.000 20.82 0.00 35.91 3.46
67 68 0.882927 ACGCACGTGTGTTATGCCTT 60.883 50.000 28.18 3.75 34.75 4.35
68 69 1.301401 ACGCACGTGTGTTATGCCT 60.301 52.632 28.18 4.54 34.75 4.75
69 70 1.154488 CACGCACGTGTGTTATGCC 60.154 57.895 30.92 3.66 40.91 4.40
70 71 4.415490 CACGCACGTGTGTTATGC 57.585 55.556 30.92 6.95 40.91 3.14
79 80 2.031508 CCCTGAAAATTTACACGCACGT 60.032 45.455 0.00 0.00 0.00 4.49
80 81 2.224549 TCCCTGAAAATTTACACGCACG 59.775 45.455 0.00 0.00 0.00 5.34
81 82 3.907894 TCCCTGAAAATTTACACGCAC 57.092 42.857 0.00 0.00 0.00 5.34
82 83 4.920640 TTTCCCTGAAAATTTACACGCA 57.079 36.364 0.00 0.00 0.00 5.24
83 84 6.779115 ATTTTTCCCTGAAAATTTACACGC 57.221 33.333 3.11 0.00 40.50 5.34
84 85 9.471084 ACTTATTTTTCCCTGAAAATTTACACG 57.529 29.630 3.11 0.00 40.50 4.49
93 94 9.762933 CTCATTTCAACTTATTTTTCCCTGAAA 57.237 29.630 0.00 0.00 36.19 2.69
94 95 8.367156 CCTCATTTCAACTTATTTTTCCCTGAA 58.633 33.333 0.00 0.00 0.00 3.02
95 96 7.728083 TCCTCATTTCAACTTATTTTTCCCTGA 59.272 33.333 0.00 0.00 0.00 3.86
96 97 7.814587 GTCCTCATTTCAACTTATTTTTCCCTG 59.185 37.037 0.00 0.00 0.00 4.45
97 98 7.730332 AGTCCTCATTTCAACTTATTTTTCCCT 59.270 33.333 0.00 0.00 0.00 4.20
98 99 7.814587 CAGTCCTCATTTCAACTTATTTTTCCC 59.185 37.037 0.00 0.00 0.00 3.97
99 100 8.360390 ACAGTCCTCATTTCAACTTATTTTTCC 58.640 33.333 0.00 0.00 0.00 3.13
100 101 9.185192 CACAGTCCTCATTTCAACTTATTTTTC 57.815 33.333 0.00 0.00 0.00 2.29
101 102 7.653311 GCACAGTCCTCATTTCAACTTATTTTT 59.347 33.333 0.00 0.00 0.00 1.94
102 103 7.147976 GCACAGTCCTCATTTCAACTTATTTT 58.852 34.615 0.00 0.00 0.00 1.82
103 104 6.265196 TGCACAGTCCTCATTTCAACTTATTT 59.735 34.615 0.00 0.00 0.00 1.40
104 105 5.769662 TGCACAGTCCTCATTTCAACTTATT 59.230 36.000 0.00 0.00 0.00 1.40
105 106 5.316167 TGCACAGTCCTCATTTCAACTTAT 58.684 37.500 0.00 0.00 0.00 1.73
106 107 4.713553 TGCACAGTCCTCATTTCAACTTA 58.286 39.130 0.00 0.00 0.00 2.24
107 108 3.554934 TGCACAGTCCTCATTTCAACTT 58.445 40.909 0.00 0.00 0.00 2.66
108 109 3.213206 TGCACAGTCCTCATTTCAACT 57.787 42.857 0.00 0.00 0.00 3.16
109 110 3.988379 TTGCACAGTCCTCATTTCAAC 57.012 42.857 0.00 0.00 0.00 3.18
110 111 4.998671 TTTTGCACAGTCCTCATTTCAA 57.001 36.364 0.00 0.00 0.00 2.69
111 112 4.998671 TTTTTGCACAGTCCTCATTTCA 57.001 36.364 0.00 0.00 0.00 2.69
129 130 5.372343 AAAAGCCCCAGATTTGTCTTTTT 57.628 34.783 0.00 0.00 31.97 1.94
130 131 5.372343 AAAAAGCCCCAGATTTGTCTTTT 57.628 34.783 0.00 0.00 35.89 2.27
131 132 6.126911 TGTTAAAAAGCCCCAGATTTGTCTTT 60.127 34.615 0.00 0.00 30.45 2.52
132 133 5.365314 TGTTAAAAAGCCCCAGATTTGTCTT 59.635 36.000 0.00 0.00 30.45 3.01
133 134 4.898861 TGTTAAAAAGCCCCAGATTTGTCT 59.101 37.500 0.00 0.00 30.45 3.41
134 135 4.988540 GTGTTAAAAAGCCCCAGATTTGTC 59.011 41.667 0.00 0.00 30.45 3.18
135 136 4.407296 TGTGTTAAAAAGCCCCAGATTTGT 59.593 37.500 0.00 0.00 30.45 2.83
136 137 4.954875 TGTGTTAAAAAGCCCCAGATTTG 58.045 39.130 0.00 0.00 30.45 2.32
137 138 5.306678 TCATGTGTTAAAAAGCCCCAGATTT 59.693 36.000 0.00 0.00 31.52 2.17
138 139 4.837860 TCATGTGTTAAAAAGCCCCAGATT 59.162 37.500 0.00 0.00 0.00 2.40
139 140 4.415596 TCATGTGTTAAAAAGCCCCAGAT 58.584 39.130 0.00 0.00 0.00 2.90
140 141 3.838565 TCATGTGTTAAAAAGCCCCAGA 58.161 40.909 0.00 0.00 0.00 3.86
141 142 4.806640 ATCATGTGTTAAAAAGCCCCAG 57.193 40.909 0.00 0.00 0.00 4.45
142 143 5.329399 AGTATCATGTGTTAAAAAGCCCCA 58.671 37.500 0.00 0.00 0.00 4.96
143 144 5.652452 AGAGTATCATGTGTTAAAAAGCCCC 59.348 40.000 0.00 0.00 37.82 5.80
144 145 6.759497 AGAGTATCATGTGTTAAAAAGCCC 57.241 37.500 0.00 0.00 37.82 5.19
145 146 7.816640 TGAAGAGTATCATGTGTTAAAAAGCC 58.183 34.615 0.00 0.00 37.82 4.35
146 147 9.495754 GATGAAGAGTATCATGTGTTAAAAAGC 57.504 33.333 0.00 0.00 40.08 3.51
147 148 9.994432 GGATGAAGAGTATCATGTGTTAAAAAG 57.006 33.333 0.00 0.00 40.08 2.27
148 149 9.739276 AGGATGAAGAGTATCATGTGTTAAAAA 57.261 29.630 0.00 0.00 40.08 1.94
149 150 9.383519 GAGGATGAAGAGTATCATGTGTTAAAA 57.616 33.333 0.00 0.00 40.08 1.52
150 151 8.762645 AGAGGATGAAGAGTATCATGTGTTAAA 58.237 33.333 0.00 0.00 40.08 1.52
151 152 8.311395 AGAGGATGAAGAGTATCATGTGTTAA 57.689 34.615 0.00 0.00 40.08 2.01
152 153 7.561356 TGAGAGGATGAAGAGTATCATGTGTTA 59.439 37.037 0.00 0.00 40.08 2.41
153 154 6.382282 TGAGAGGATGAAGAGTATCATGTGTT 59.618 38.462 0.00 0.00 40.08 3.32
154 155 5.896106 TGAGAGGATGAAGAGTATCATGTGT 59.104 40.000 0.00 0.00 40.08 3.72
155 156 6.402456 TGAGAGGATGAAGAGTATCATGTG 57.598 41.667 0.00 0.00 40.08 3.21
156 157 5.539574 CCTGAGAGGATGAAGAGTATCATGT 59.460 44.000 0.00 0.00 40.08 3.21
157 158 5.567224 GCCTGAGAGGATGAAGAGTATCATG 60.567 48.000 0.00 0.00 40.08 3.07
158 159 4.527816 GCCTGAGAGGATGAAGAGTATCAT 59.472 45.833 0.00 0.00 42.62 2.45
159 160 3.894427 GCCTGAGAGGATGAAGAGTATCA 59.106 47.826 0.00 0.00 37.67 2.15
160 161 3.258123 GGCCTGAGAGGATGAAGAGTATC 59.742 52.174 0.00 0.00 37.67 2.24
161 162 3.238597 GGCCTGAGAGGATGAAGAGTAT 58.761 50.000 0.00 0.00 37.67 2.12
162 163 2.023984 TGGCCTGAGAGGATGAAGAGTA 60.024 50.000 3.32 0.00 37.67 2.59
163 164 1.273495 TGGCCTGAGAGGATGAAGAGT 60.273 52.381 3.32 0.00 37.67 3.24
164 165 1.493861 TGGCCTGAGAGGATGAAGAG 58.506 55.000 3.32 0.00 37.67 2.85
165 166 1.767088 CATGGCCTGAGAGGATGAAGA 59.233 52.381 3.32 0.00 37.67 2.87
166 167 1.767088 TCATGGCCTGAGAGGATGAAG 59.233 52.381 3.32 0.00 37.67 3.02
167 168 1.883678 TCATGGCCTGAGAGGATGAA 58.116 50.000 3.32 0.00 37.67 2.57
168 169 1.883678 TTCATGGCCTGAGAGGATGA 58.116 50.000 3.32 0.00 37.67 2.92
169 170 2.953284 ATTCATGGCCTGAGAGGATG 57.047 50.000 3.32 0.00 37.67 3.51
170 171 3.053095 ACAAATTCATGGCCTGAGAGGAT 60.053 43.478 3.32 0.00 37.67 3.24
171 172 2.309755 ACAAATTCATGGCCTGAGAGGA 59.690 45.455 3.32 0.00 37.67 3.71
172 173 2.686915 GACAAATTCATGGCCTGAGAGG 59.313 50.000 3.32 0.00 38.80 3.69
173 174 3.618351 AGACAAATTCATGGCCTGAGAG 58.382 45.455 3.32 0.00 34.68 3.20
174 175 3.726557 AGACAAATTCATGGCCTGAGA 57.273 42.857 3.32 0.00 34.68 3.27
175 176 4.796038 AAAGACAAATTCATGGCCTGAG 57.204 40.909 3.32 0.00 34.68 3.35
176 177 5.070180 TGAAAAAGACAAATTCATGGCCTGA 59.930 36.000 3.32 2.06 0.00 3.86
177 178 5.299148 TGAAAAAGACAAATTCATGGCCTG 58.701 37.500 3.32 0.00 0.00 4.85
178 179 5.549742 TGAAAAAGACAAATTCATGGCCT 57.450 34.783 3.32 0.00 0.00 5.19
179 180 7.903995 TTATGAAAAAGACAAATTCATGGCC 57.096 32.000 0.00 0.00 42.20 5.36
180 181 8.445493 CCTTTATGAAAAAGACAAATTCATGGC 58.555 33.333 9.76 0.00 42.20 4.40
181 182 9.492973 ACCTTTATGAAAAAGACAAATTCATGG 57.507 29.630 9.76 5.97 42.20 3.66
184 185 9.528018 GTGACCTTTATGAAAAAGACAAATTCA 57.472 29.630 0.00 0.00 37.47 2.57
185 186 9.528018 TGTGACCTTTATGAAAAAGACAAATTC 57.472 29.630 0.00 0.00 0.00 2.17
188 189 9.883142 AAATGTGACCTTTATGAAAAAGACAAA 57.117 25.926 0.00 0.00 0.00 2.83
189 190 9.528018 GAAATGTGACCTTTATGAAAAAGACAA 57.472 29.630 0.00 0.00 0.00 3.18
190 191 8.690884 TGAAATGTGACCTTTATGAAAAAGACA 58.309 29.630 0.00 0.00 0.00 3.41
191 192 9.528018 TTGAAATGTGACCTTTATGAAAAAGAC 57.472 29.630 0.00 0.00 0.00 3.01
192 193 9.528018 GTTGAAATGTGACCTTTATGAAAAAGA 57.472 29.630 0.00 0.00 0.00 2.52
193 194 8.479280 CGTTGAAATGTGACCTTTATGAAAAAG 58.521 33.333 0.00 0.00 0.00 2.27
194 195 7.976734 ACGTTGAAATGTGACCTTTATGAAAAA 59.023 29.630 0.00 0.00 0.00 1.94
195 196 7.484975 ACGTTGAAATGTGACCTTTATGAAAA 58.515 30.769 0.00 0.00 0.00 2.29
196 197 7.033530 ACGTTGAAATGTGACCTTTATGAAA 57.966 32.000 0.00 0.00 0.00 2.69
197 198 6.627395 ACGTTGAAATGTGACCTTTATGAA 57.373 33.333 0.00 0.00 0.00 2.57
198 199 6.627395 AACGTTGAAATGTGACCTTTATGA 57.373 33.333 0.00 0.00 0.00 2.15
199 200 7.692908 AAAACGTTGAAATGTGACCTTTATG 57.307 32.000 0.00 0.00 0.00 1.90
200 201 7.976734 TGAAAAACGTTGAAATGTGACCTTTAT 59.023 29.630 0.00 0.00 0.00 1.40
201 202 7.313646 TGAAAAACGTTGAAATGTGACCTTTA 58.686 30.769 0.00 0.00 0.00 1.85
202 203 6.159988 TGAAAAACGTTGAAATGTGACCTTT 58.840 32.000 0.00 0.00 0.00 3.11
203 204 5.715070 TGAAAAACGTTGAAATGTGACCTT 58.285 33.333 0.00 0.00 0.00 3.50
204 205 5.317733 TGAAAAACGTTGAAATGTGACCT 57.682 34.783 0.00 0.00 0.00 3.85
205 206 6.475402 AGAATGAAAAACGTTGAAATGTGACC 59.525 34.615 0.00 0.00 0.00 4.02
206 207 7.449934 AGAATGAAAAACGTTGAAATGTGAC 57.550 32.000 0.00 0.00 0.00 3.67
207 208 9.574458 TTTAGAATGAAAAACGTTGAAATGTGA 57.426 25.926 0.00 0.00 0.00 3.58
237 238 9.719355 ACAAGTATGTTATGTCTATGTGTGAAA 57.281 29.630 0.00 0.00 35.91 2.69
254 255 8.940768 AAAATTGTGCAAGTAAACAAGTATGT 57.059 26.923 0.00 0.00 43.14 2.29
311 312 9.964303 GGCCTTTTTATGAAAACAAATCAAAAT 57.036 25.926 0.00 0.00 31.72 1.82
312 313 9.183368 AGGCCTTTTTATGAAAACAAATCAAAA 57.817 25.926 0.00 0.00 31.72 2.44
313 314 8.744568 AGGCCTTTTTATGAAAACAAATCAAA 57.255 26.923 0.00 0.00 31.72 2.69
314 315 7.443879 GGAGGCCTTTTTATGAAAACAAATCAA 59.556 33.333 6.77 0.00 31.72 2.57
315 316 6.934083 GGAGGCCTTTTTATGAAAACAAATCA 59.066 34.615 6.77 0.00 31.72 2.57
316 317 6.090763 CGGAGGCCTTTTTATGAAAACAAATC 59.909 38.462 6.77 0.00 31.72 2.17
317 318 5.931724 CGGAGGCCTTTTTATGAAAACAAAT 59.068 36.000 6.77 0.00 31.72 2.32
318 319 5.163395 ACGGAGGCCTTTTTATGAAAACAAA 60.163 36.000 6.77 0.00 31.72 2.83
319 320 4.342665 ACGGAGGCCTTTTTATGAAAACAA 59.657 37.500 6.77 0.00 31.72 2.83
320 321 3.892588 ACGGAGGCCTTTTTATGAAAACA 59.107 39.130 6.77 0.00 31.72 2.83
321 322 4.234574 CACGGAGGCCTTTTTATGAAAAC 58.765 43.478 6.77 0.00 31.72 2.43
322 323 3.257127 CCACGGAGGCCTTTTTATGAAAA 59.743 43.478 6.77 0.00 33.86 2.29
323 324 2.823154 CCACGGAGGCCTTTTTATGAAA 59.177 45.455 6.77 0.00 0.00 2.69
324 325 2.442413 CCACGGAGGCCTTTTTATGAA 58.558 47.619 6.77 0.00 0.00 2.57
325 326 2.122783 CCACGGAGGCCTTTTTATGA 57.877 50.000 6.77 0.00 0.00 2.15
345 346 3.952628 GACGTTTGGCTCCCGGGAG 62.953 68.421 41.29 41.29 44.56 4.30
346 347 4.011517 GACGTTTGGCTCCCGGGA 62.012 66.667 25.06 25.06 0.00 5.14
350 351 4.699522 AGCGGACGTTTGGCTCCC 62.700 66.667 3.48 0.00 29.31 4.30
351 352 3.119096 GAGCGGACGTTTGGCTCC 61.119 66.667 19.59 2.41 45.67 4.70
353 354 1.248785 TAGAGAGCGGACGTTTGGCT 61.249 55.000 8.42 8.42 40.29 4.75
354 355 0.179108 ATAGAGAGCGGACGTTTGGC 60.179 55.000 0.00 0.00 0.00 4.52
355 356 2.287668 CCTATAGAGAGCGGACGTTTGG 60.288 54.545 0.00 0.00 0.00 3.28
356 357 2.287668 CCCTATAGAGAGCGGACGTTTG 60.288 54.545 0.00 0.00 0.00 2.93
357 358 1.955080 CCCTATAGAGAGCGGACGTTT 59.045 52.381 0.00 0.00 0.00 3.60
358 359 1.606903 CCCTATAGAGAGCGGACGTT 58.393 55.000 0.00 0.00 0.00 3.99
359 360 0.250814 CCCCTATAGAGAGCGGACGT 60.251 60.000 0.00 0.00 0.00 4.34
360 361 0.961358 CCCCCTATAGAGAGCGGACG 60.961 65.000 0.00 0.00 0.00 4.79
361 362 0.112801 ACCCCCTATAGAGAGCGGAC 59.887 60.000 0.00 0.00 0.00 4.79
362 363 0.858369 AACCCCCTATAGAGAGCGGA 59.142 55.000 0.00 0.00 0.00 5.54
363 364 1.203075 AGAACCCCCTATAGAGAGCGG 60.203 57.143 0.00 0.00 0.00 5.52
364 365 2.296073 AGAACCCCCTATAGAGAGCG 57.704 55.000 0.00 0.00 0.00 5.03
365 366 4.391683 ACTAGAACCCCCTATAGAGAGC 57.608 50.000 0.00 0.00 0.00 4.09
366 367 7.528675 ACTTAACTAGAACCCCCTATAGAGAG 58.471 42.308 0.00 0.00 0.00 3.20
367 368 7.477345 ACTTAACTAGAACCCCCTATAGAGA 57.523 40.000 0.00 0.00 0.00 3.10
368 369 7.015389 CCAACTTAACTAGAACCCCCTATAGAG 59.985 44.444 0.00 0.00 0.00 2.43
369 370 6.842807 CCAACTTAACTAGAACCCCCTATAGA 59.157 42.308 0.00 0.00 0.00 1.98
370 371 6.042897 CCCAACTTAACTAGAACCCCCTATAG 59.957 46.154 0.00 0.00 0.00 1.31
451 452 4.929211 ACAAAGGTGAAAAAGTGCACTTTC 59.071 37.500 37.59 28.46 44.69 2.62
523 538 3.819902 TGACTGCAGCATGTGACATTTTA 59.180 39.130 15.27 0.00 39.31 1.52
524 539 2.624364 TGACTGCAGCATGTGACATTTT 59.376 40.909 15.27 0.00 39.31 1.82
536 551 2.149578 AGAAAGTGACATGACTGCAGC 58.850 47.619 15.27 7.45 0.00 5.25
626 667 7.985184 ACACTGTCATCAACTAAGTTTGTCTTA 59.015 33.333 0.00 0.00 37.56 2.10
627 668 6.823689 ACACTGTCATCAACTAAGTTTGTCTT 59.176 34.615 0.00 0.00 39.89 3.01
628 669 6.258727 CACACTGTCATCAACTAAGTTTGTCT 59.741 38.462 0.00 0.00 0.00 3.41
629 670 6.257849 TCACACTGTCATCAACTAAGTTTGTC 59.742 38.462 0.00 0.00 0.00 3.18
630 671 6.112734 TCACACTGTCATCAACTAAGTTTGT 58.887 36.000 0.00 0.00 0.00 2.83
631 672 6.603237 TCACACTGTCATCAACTAAGTTTG 57.397 37.500 0.00 0.00 0.00 2.93
632 673 8.902540 TTATCACACTGTCATCAACTAAGTTT 57.097 30.769 0.00 0.00 0.00 2.66
633 674 8.902540 TTTATCACACTGTCATCAACTAAGTT 57.097 30.769 0.00 0.00 0.00 2.66
634 675 8.774586 GTTTTATCACACTGTCATCAACTAAGT 58.225 33.333 0.00 0.00 0.00 2.24
635 676 8.993121 AGTTTTATCACACTGTCATCAACTAAG 58.007 33.333 0.00 0.00 0.00 2.18
710 752 3.307691 CCTCAAGTGGACCTGCTTGATTA 60.308 47.826 22.99 9.35 46.52 1.75
713 755 0.397941 CCTCAAGTGGACCTGCTTGA 59.602 55.000 22.04 22.04 45.88 3.02
717 759 2.360475 GGCCTCAAGTGGACCTGC 60.360 66.667 0.00 0.00 0.00 4.85
744 790 5.517054 TGTTTGTTCATTCTGCGGTTTAAAC 59.483 36.000 9.98 9.98 0.00 2.01
746 799 5.250235 TGTTTGTTCATTCTGCGGTTTAA 57.750 34.783 0.00 0.00 0.00 1.52
747 800 4.902443 TGTTTGTTCATTCTGCGGTTTA 57.098 36.364 0.00 0.00 0.00 2.01
759 812 2.093816 TGCCTTTGTGCATGTTTGTTCA 60.094 40.909 0.00 0.00 36.04 3.18
760 813 2.540931 CTGCCTTTGTGCATGTTTGTTC 59.459 45.455 0.00 0.00 41.16 3.18
858 912 2.192664 TGAGCTAAAATTGGGTCGCA 57.807 45.000 4.61 0.00 38.76 5.10
954 1014 1.507174 CGACCTCCTCGTCCTTGAC 59.493 63.158 0.00 0.00 37.64 3.18
1118 1178 0.533951 GAACGGGTCCAGGTAATCGT 59.466 55.000 0.00 0.00 0.00 3.73
1276 1336 1.154727 CGCGCACGGTAACTTTGAC 60.155 57.895 8.75 0.00 34.97 3.18
1460 1520 1.367471 CAGCAGTCGGTCTTGTGGA 59.633 57.895 0.00 0.00 0.00 4.02
1839 1899 3.586892 GAAAGGGTAGAGGTTGTTCTCG 58.413 50.000 0.00 0.00 38.71 4.04
2183 2243 2.267642 CGGGCATTTCCTCGGTGA 59.732 61.111 0.00 0.00 34.39 4.02
2317 2377 2.478890 CCGACGGCGTGTAGAGGAT 61.479 63.158 21.19 0.00 35.23 3.24
2319 2379 4.849329 GCCGACGGCGTGTAGAGG 62.849 72.222 25.24 13.70 39.62 3.69
2452 2512 2.740714 CGCTGAAGTTGTAGCCCGC 61.741 63.158 3.78 0.00 36.60 6.13
2529 2589 2.022129 GTTGGCGACGTGTCTCCTG 61.022 63.158 10.14 0.00 35.57 3.86
2598 2658 2.840974 CCTGAAGGTGTACTTGGCG 58.159 57.895 0.00 0.00 40.21 5.69
2731 2791 2.506472 GTCGGGGATGAAGGAGGC 59.494 66.667 0.00 0.00 0.00 4.70
2827 2888 2.746277 GGGCACGTTCTTGGCGAT 60.746 61.111 0.00 0.00 42.95 4.58
2848 2909 1.048601 ATCTTGACCCATACGGCGAT 58.951 50.000 16.62 0.00 33.26 4.58
2886 2947 2.676016 TTTTCCCGCAGCAAGCAACG 62.676 55.000 0.00 0.00 46.13 4.10
2887 2948 0.529555 TTTTTCCCGCAGCAAGCAAC 60.530 50.000 0.00 0.00 46.13 4.17
2888 2949 1.819229 TTTTTCCCGCAGCAAGCAA 59.181 47.368 0.00 0.00 46.13 3.91
2889 2950 3.531283 TTTTTCCCGCAGCAAGCA 58.469 50.000 0.00 0.00 46.13 3.91
2915 2976 8.736244 GGAAGGTAGTTCAAATTTATGTGCTAA 58.264 33.333 0.00 0.00 36.82 3.09
2916 2977 8.107095 AGGAAGGTAGTTCAAATTTATGTGCTA 58.893 33.333 0.00 0.00 36.82 3.49
2917 2978 6.948309 AGGAAGGTAGTTCAAATTTATGTGCT 59.052 34.615 0.00 0.00 36.82 4.40
2918 2979 7.158099 AGGAAGGTAGTTCAAATTTATGTGC 57.842 36.000 0.00 0.00 36.82 4.57
2946 3007 9.692749 GCTATTGTACACTGCATAGATTTACTA 57.307 33.333 13.98 0.00 35.42 1.82
2947 3008 8.424918 AGCTATTGTACACTGCATAGATTTACT 58.575 33.333 13.98 1.81 0.00 2.24
2948 3009 8.594881 AGCTATTGTACACTGCATAGATTTAC 57.405 34.615 13.98 0.00 0.00 2.01
2953 3014 9.025041 ACATATAGCTATTGTACACTGCATAGA 57.975 33.333 12.39 4.42 0.00 1.98
2954 3015 9.295214 GACATATAGCTATTGTACACTGCATAG 57.705 37.037 12.39 10.85 0.00 2.23
2955 3016 8.802267 TGACATATAGCTATTGTACACTGCATA 58.198 33.333 12.39 10.34 0.00 3.14
2956 3017 7.670364 TGACATATAGCTATTGTACACTGCAT 58.330 34.615 12.39 0.76 0.00 3.96
2957 3018 7.049799 TGACATATAGCTATTGTACACTGCA 57.950 36.000 12.39 6.65 0.00 4.41
2958 3019 7.946655 TTGACATATAGCTATTGTACACTGC 57.053 36.000 12.39 0.00 0.00 4.40
2959 3020 8.854312 CGATTGACATATAGCTATTGTACACTG 58.146 37.037 12.39 1.95 0.00 3.66
2960 3021 8.577296 ACGATTGACATATAGCTATTGTACACT 58.423 33.333 12.39 9.85 0.00 3.55
2961 3022 8.744008 ACGATTGACATATAGCTATTGTACAC 57.256 34.615 12.39 5.67 0.00 2.90
2962 3023 8.793592 AGACGATTGACATATAGCTATTGTACA 58.206 33.333 12.39 12.07 0.00 2.90
2963 3024 9.066939 CAGACGATTGACATATAGCTATTGTAC 57.933 37.037 12.39 10.13 0.00 2.90
2964 3025 8.244113 CCAGACGATTGACATATAGCTATTGTA 58.756 37.037 12.39 3.34 0.00 2.41
2986 3047 5.358442 TCAAAAATCGACTCCAAAAACCAGA 59.642 36.000 0.00 0.00 0.00 3.86
3021 3092 0.813184 AGCATGAATCACAAAGCCCG 59.187 50.000 0.00 0.00 35.29 6.13
3050 3121 3.869065 ACGTTCACACCAAAGAAAGAGA 58.131 40.909 0.00 0.00 0.00 3.10
3051 3122 4.616181 AACGTTCACACCAAAGAAAGAG 57.384 40.909 0.00 0.00 0.00 2.85
3054 3125 4.686554 CCAAAAACGTTCACACCAAAGAAA 59.313 37.500 0.00 0.00 0.00 2.52
3055 3126 4.238514 CCAAAAACGTTCACACCAAAGAA 58.761 39.130 0.00 0.00 0.00 2.52
3059 3130 1.404315 GCCCAAAAACGTTCACACCAA 60.404 47.619 0.00 0.00 0.00 3.67
3071 3142 2.803956 CGAAACGAGTCTAGCCCAAAAA 59.196 45.455 0.00 0.00 0.00 1.94
3083 3154 0.942962 AGTGAGTCGACGAAACGAGT 59.057 50.000 10.46 10.21 46.42 4.18
3086 3157 0.660595 AGCAGTGAGTCGACGAAACG 60.661 55.000 10.46 7.60 0.00 3.60
3130 3202 4.087892 AAGCGCAGACGAGCCCAT 62.088 61.111 11.47 0.00 43.93 4.00
3144 3217 1.877443 TCAAACTTAACGGGCAGAAGC 59.123 47.619 0.00 0.00 41.10 3.86
3146 3219 2.223745 GGTCAAACTTAACGGGCAGAA 58.776 47.619 0.00 0.00 0.00 3.02
3152 3225 4.692155 AGAATAACGGGTCAAACTTAACGG 59.308 41.667 0.00 0.00 0.00 4.44
3153 3226 5.614760 CAGAATAACGGGTCAAACTTAACG 58.385 41.667 0.00 0.00 0.00 3.18
3156 3229 4.004982 GGCAGAATAACGGGTCAAACTTA 58.995 43.478 0.00 0.00 0.00 2.24
3157 3230 2.817844 GGCAGAATAACGGGTCAAACTT 59.182 45.455 0.00 0.00 0.00 2.66
3161 3244 0.391927 CGGGCAGAATAACGGGTCAA 60.392 55.000 0.00 0.00 0.00 3.18
3186 3269 2.970974 GCAACAAGCAGTCGGGCTC 61.971 63.158 0.00 0.00 45.07 4.70
3198 3298 1.065709 GGGGACGAGATAAGGCAACAA 60.066 52.381 0.00 0.00 41.41 2.83
3213 3313 1.186267 ACAGACGAGAAGTGGGGGAC 61.186 60.000 0.00 0.00 0.00 4.46
3223 3324 1.853114 GACTGACCGCACAGACGAGA 61.853 60.000 12.64 0.00 40.63 4.04
3229 3330 1.373497 GGAGTGACTGACCGCACAG 60.373 63.158 0.00 5.72 42.78 3.66
3234 3335 0.528470 GAGAAGGGAGTGACTGACCG 59.472 60.000 0.00 0.00 0.00 4.79
3255 3356 3.448686 AGACAGAATGCGACGAATAAGG 58.551 45.455 0.00 0.00 42.53 2.69
3259 3360 1.478510 AGGAGACAGAATGCGACGAAT 59.521 47.619 0.00 0.00 42.53 3.34
3268 3369 1.062505 GGGGAGAGGAGGAGACAGAAT 60.063 57.143 0.00 0.00 0.00 2.40
3319 3420 3.023832 GGAGAGGAGGAAGAGACAGAAG 58.976 54.545 0.00 0.00 0.00 2.85
3322 3423 1.065053 TCGGAGAGGAGGAAGAGACAG 60.065 57.143 0.00 0.00 0.00 3.51
3340 3441 5.116180 TCTATAGAACAAAAGGCACCATCG 58.884 41.667 0.00 0.00 0.00 3.84
3347 3448 4.811557 ACGCAGATCTATAGAACAAAAGGC 59.188 41.667 6.52 3.64 0.00 4.35
3350 3451 6.036083 GCTTCACGCAGATCTATAGAACAAAA 59.964 38.462 6.52 0.00 38.92 2.44
3386 3489 8.254508 AGCAAAAGAAACCTACAAAAACACATA 58.745 29.630 0.00 0.00 0.00 2.29
3420 3523 1.879380 CTGAATCCGAGCACCAACAAA 59.121 47.619 0.00 0.00 0.00 2.83
3421 3524 1.202758 ACTGAATCCGAGCACCAACAA 60.203 47.619 0.00 0.00 0.00 2.83
3443 3546 1.225373 CATGGATCCAAGAAGGGGGA 58.775 55.000 20.67 0.00 38.24 4.81
3460 3563 4.018597 ACCTGAAAAAGCAGATCTCCTCAT 60.019 41.667 0.00 0.00 38.14 2.90
3528 3632 3.573967 ACCAAGCATCAAACCTAAACCAG 59.426 43.478 0.00 0.00 0.00 4.00
3531 3635 3.317150 GCACCAAGCATCAAACCTAAAC 58.683 45.455 0.00 0.00 44.79 2.01
3552 3657 0.733566 AAATTTGCACAGGCGCATCG 60.734 50.000 10.83 0.00 45.35 3.84
3559 3664 5.064962 TGCTGAAAAGAAAAATTTGCACAGG 59.935 36.000 0.00 0.00 0.00 4.00
3566 3671 8.721019 TTCTCACATGCTGAAAAGAAAAATTT 57.279 26.923 0.00 0.00 0.00 1.82
3567 3672 8.721019 TTTCTCACATGCTGAAAAGAAAAATT 57.279 26.923 0.00 0.00 0.00 1.82
3568 3673 8.721019 TTTTCTCACATGCTGAAAAGAAAAAT 57.279 26.923 13.50 0.00 35.57 1.82
3586 3691 2.942804 TGGCCATGTTCACTTTTCTCA 58.057 42.857 0.00 0.00 0.00 3.27
3590 3695 4.779696 ACATTTTGGCCATGTTCACTTTT 58.220 34.783 6.09 0.00 30.22 2.27
3652 8808 1.846782 GTCAGTAGCACACGCGATAAG 59.153 52.381 15.93 1.54 45.49 1.73
3660 8816 4.655762 TGATATCCAGTCAGTAGCACAC 57.344 45.455 0.00 0.00 0.00 3.82
3661 8817 5.046663 TGTTTGATATCCAGTCAGTAGCACA 60.047 40.000 0.00 0.00 0.00 4.57
3681 8837 5.006153 TCCGACTCAATATCGACATGTTT 57.994 39.130 0.00 0.00 42.25 2.83
3693 8849 1.210478 CTGGGGACAATCCGACTCAAT 59.790 52.381 0.00 0.00 42.06 2.57
3718 8874 4.517285 TCCTTGATGCTGTTAATCACCTC 58.483 43.478 0.00 0.00 33.84 3.85
3731 8887 3.087031 CCATATGGGTCATCCTTGATGC 58.913 50.000 14.52 0.00 39.63 3.91
3745 8901 5.451659 CCTCTTCGATGATAGAGCCATATGG 60.452 48.000 18.07 18.07 37.23 2.74
3746 8902 5.590145 CCTCTTCGATGATAGAGCCATATG 58.410 45.833 6.37 0.00 37.23 1.78
3747 8903 4.099266 GCCTCTTCGATGATAGAGCCATAT 59.901 45.833 6.37 0.00 37.23 1.78
3748 8904 3.445450 GCCTCTTCGATGATAGAGCCATA 59.555 47.826 6.37 0.00 37.23 2.74
3749 8905 2.233431 GCCTCTTCGATGATAGAGCCAT 59.767 50.000 6.37 0.00 37.23 4.40
3750 8906 1.615883 GCCTCTTCGATGATAGAGCCA 59.384 52.381 6.37 0.00 37.23 4.75
3751 8907 1.615883 TGCCTCTTCGATGATAGAGCC 59.384 52.381 6.37 0.00 37.23 4.70
3752 8908 3.591196 ATGCCTCTTCGATGATAGAGC 57.409 47.619 6.37 6.20 37.23 4.09
3753 8909 3.679025 GCAATGCCTCTTCGATGATAGAG 59.321 47.826 5.08 5.08 38.08 2.43
3754 8910 3.070015 TGCAATGCCTCTTCGATGATAGA 59.930 43.478 1.53 0.00 0.00 1.98
3755 8911 3.396560 TGCAATGCCTCTTCGATGATAG 58.603 45.455 1.53 0.00 0.00 2.08
3756 8912 3.473923 TGCAATGCCTCTTCGATGATA 57.526 42.857 1.53 0.00 0.00 2.15
3757 8913 2.336945 TGCAATGCCTCTTCGATGAT 57.663 45.000 1.53 0.00 0.00 2.45
3758 8914 1.739466 GTTGCAATGCCTCTTCGATGA 59.261 47.619 0.59 0.63 0.00 2.92
3759 8915 1.741706 AGTTGCAATGCCTCTTCGATG 59.258 47.619 0.59 0.00 0.00 3.84
3760 8916 1.741706 CAGTTGCAATGCCTCTTCGAT 59.258 47.619 0.59 0.00 0.00 3.59
3761 8917 1.159285 CAGTTGCAATGCCTCTTCGA 58.841 50.000 0.59 0.00 0.00 3.71
3762 8918 0.455633 GCAGTTGCAATGCCTCTTCG 60.456 55.000 17.74 0.00 41.59 3.79
3763 8919 0.886563 AGCAGTTGCAATGCCTCTTC 59.113 50.000 22.14 3.58 44.97 2.87
3764 8920 0.601558 CAGCAGTTGCAATGCCTCTT 59.398 50.000 22.14 8.19 44.97 2.85
3765 8921 2.264124 CAGCAGTTGCAATGCCTCT 58.736 52.632 22.14 5.64 44.97 3.69
3766 8922 4.883026 CAGCAGTTGCAATGCCTC 57.117 55.556 22.14 3.55 44.97 4.70
3775 8931 1.613836 AAAAGAGGGAGCAGCAGTTG 58.386 50.000 0.00 0.00 0.00 3.16
3776 8932 3.508845 TTAAAAGAGGGAGCAGCAGTT 57.491 42.857 0.00 0.00 0.00 3.16
3777 8933 3.149981 GTTTAAAAGAGGGAGCAGCAGT 58.850 45.455 0.00 0.00 0.00 4.40
3778 8934 3.149196 TGTTTAAAAGAGGGAGCAGCAG 58.851 45.455 0.00 0.00 0.00 4.24
3779 8935 3.222173 TGTTTAAAAGAGGGAGCAGCA 57.778 42.857 0.00 0.00 0.00 4.41
3780 8936 4.488879 CAATGTTTAAAAGAGGGAGCAGC 58.511 43.478 0.00 0.00 0.00 5.25
3781 8937 4.488879 GCAATGTTTAAAAGAGGGAGCAG 58.511 43.478 0.00 0.00 0.00 4.24
3782 8938 3.258123 GGCAATGTTTAAAAGAGGGAGCA 59.742 43.478 0.00 0.00 0.00 4.26
3783 8939 3.258123 TGGCAATGTTTAAAAGAGGGAGC 59.742 43.478 0.00 0.00 0.00 4.70
3784 8940 4.524328 ACTGGCAATGTTTAAAAGAGGGAG 59.476 41.667 0.00 0.00 0.00 4.30
3785 8941 4.479158 ACTGGCAATGTTTAAAAGAGGGA 58.521 39.130 0.00 0.00 0.00 4.20
3786 8942 4.871933 ACTGGCAATGTTTAAAAGAGGG 57.128 40.909 0.00 0.00 0.00 4.30
3787 8943 4.990426 CCAACTGGCAATGTTTAAAAGAGG 59.010 41.667 0.00 0.00 0.00 3.69
3788 8944 5.600696 ACCAACTGGCAATGTTTAAAAGAG 58.399 37.500 0.00 0.00 39.32 2.85
3789 8945 5.606348 ACCAACTGGCAATGTTTAAAAGA 57.394 34.783 0.00 0.00 39.32 2.52
3790 8946 6.983890 ACTAACCAACTGGCAATGTTTAAAAG 59.016 34.615 0.00 0.00 39.32 2.27
3791 8947 6.879400 ACTAACCAACTGGCAATGTTTAAAA 58.121 32.000 0.00 0.00 39.32 1.52
3792 8948 6.096987 TGACTAACCAACTGGCAATGTTTAAA 59.903 34.615 0.00 0.00 39.32 1.52
3793 8949 5.594725 TGACTAACCAACTGGCAATGTTTAA 59.405 36.000 0.00 0.00 39.32 1.52
3794 8950 5.133941 TGACTAACCAACTGGCAATGTTTA 58.866 37.500 0.00 0.00 39.32 2.01
3795 8951 3.957497 TGACTAACCAACTGGCAATGTTT 59.043 39.130 0.00 0.00 39.32 2.83
3796 8952 3.561143 TGACTAACCAACTGGCAATGTT 58.439 40.909 0.00 0.00 39.32 2.71
3797 8953 3.222173 TGACTAACCAACTGGCAATGT 57.778 42.857 0.00 0.00 39.32 2.71
3798 8954 4.012374 AGATGACTAACCAACTGGCAATG 58.988 43.478 0.00 0.00 39.32 2.82
3799 8955 4.265073 GAGATGACTAACCAACTGGCAAT 58.735 43.478 0.00 0.00 39.32 3.56
3800 8956 3.559171 GGAGATGACTAACCAACTGGCAA 60.559 47.826 0.00 0.00 39.32 4.52
3801 8957 2.027192 GGAGATGACTAACCAACTGGCA 60.027 50.000 0.00 0.00 39.32 4.92
3802 8958 2.237392 AGGAGATGACTAACCAACTGGC 59.763 50.000 0.00 0.00 39.32 4.85
3803 8959 4.559862 AAGGAGATGACTAACCAACTGG 57.440 45.455 0.00 0.00 42.17 4.00
3804 8960 6.884280 AAAAAGGAGATGACTAACCAACTG 57.116 37.500 0.00 0.00 0.00 3.16
3805 8961 7.746703 ACTAAAAAGGAGATGACTAACCAACT 58.253 34.615 0.00 0.00 0.00 3.16
3806 8962 7.660208 TGACTAAAAAGGAGATGACTAACCAAC 59.340 37.037 0.00 0.00 0.00 3.77
3807 8963 7.741785 TGACTAAAAAGGAGATGACTAACCAA 58.258 34.615 0.00 0.00 0.00 3.67
3808 8964 7.311092 TGACTAAAAAGGAGATGACTAACCA 57.689 36.000 0.00 0.00 0.00 3.67
3809 8965 7.824779 ACATGACTAAAAAGGAGATGACTAACC 59.175 37.037 0.00 0.00 0.00 2.85
3810 8966 8.779354 ACATGACTAAAAAGGAGATGACTAAC 57.221 34.615 0.00 0.00 0.00 2.34
3811 8967 8.816894 AGACATGACTAAAAAGGAGATGACTAA 58.183 33.333 0.00 0.00 0.00 2.24
3812 8968 8.367660 AGACATGACTAAAAAGGAGATGACTA 57.632 34.615 0.00 0.00 0.00 2.59
3813 8969 7.038729 TGAGACATGACTAAAAAGGAGATGACT 60.039 37.037 0.00 0.00 0.00 3.41
3814 8970 7.099764 TGAGACATGACTAAAAAGGAGATGAC 58.900 38.462 0.00 0.00 0.00 3.06
3815 8971 7.038729 ACTGAGACATGACTAAAAAGGAGATGA 60.039 37.037 0.00 0.00 0.00 2.92
3816 8972 7.102346 ACTGAGACATGACTAAAAAGGAGATG 58.898 38.462 0.00 0.00 0.00 2.90
3817 8973 7.251321 ACTGAGACATGACTAAAAAGGAGAT 57.749 36.000 0.00 0.00 0.00 2.75
3818 8974 6.672266 ACTGAGACATGACTAAAAAGGAGA 57.328 37.500 0.00 0.00 0.00 3.71
3819 8975 6.148480 CCAACTGAGACATGACTAAAAAGGAG 59.852 42.308 0.00 0.00 0.00 3.69
3820 8976 5.997746 CCAACTGAGACATGACTAAAAAGGA 59.002 40.000 0.00 0.00 0.00 3.36
3821 8977 5.765182 ACCAACTGAGACATGACTAAAAAGG 59.235 40.000 0.00 1.93 0.00 3.11
3822 8978 6.867662 ACCAACTGAGACATGACTAAAAAG 57.132 37.500 0.00 0.00 0.00 2.27
3823 8979 6.459573 GCAACCAACTGAGACATGACTAAAAA 60.460 38.462 0.00 0.00 0.00 1.94
3824 8980 5.008613 GCAACCAACTGAGACATGACTAAAA 59.991 40.000 0.00 0.00 0.00 1.52
3825 8981 4.515191 GCAACCAACTGAGACATGACTAAA 59.485 41.667 0.00 0.00 0.00 1.85
3826 8982 4.065088 GCAACCAACTGAGACATGACTAA 58.935 43.478 0.00 0.00 0.00 2.24
3827 8983 3.070878 TGCAACCAACTGAGACATGACTA 59.929 43.478 0.00 0.00 0.00 2.59
3828 8984 2.158769 TGCAACCAACTGAGACATGACT 60.159 45.455 0.00 0.00 0.00 3.41
3829 8985 2.031682 GTGCAACCAACTGAGACATGAC 60.032 50.000 0.00 0.00 0.00 3.06
3830 8986 2.158769 AGTGCAACCAACTGAGACATGA 60.159 45.455 0.00 0.00 37.80 3.07
3831 8987 2.224606 AGTGCAACCAACTGAGACATG 58.775 47.619 0.00 0.00 37.80 3.21
3832 8988 2.645838 AGTGCAACCAACTGAGACAT 57.354 45.000 0.00 0.00 37.80 3.06
3833 8989 2.418368 AAGTGCAACCAACTGAGACA 57.582 45.000 0.00 0.00 37.80 3.41
3834 8990 3.782889 AAAAGTGCAACCAACTGAGAC 57.217 42.857 0.00 0.00 37.80 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.