Multiple sequence alignment - TraesCS1B01G410700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G410700 chr1B 100.000 3288 0 0 1 3288 637479655 637476368 0.000000e+00 6072.0
1 TraesCS1B01G410700 chr1B 91.411 1141 70 10 1285 2424 637388531 637387418 0.000000e+00 1539.0
2 TraesCS1B01G410700 chr1B 88.269 878 102 1 1285 2161 631825055 631825932 0.000000e+00 1050.0
3 TraesCS1B01G410700 chr1B 85.900 922 123 5 1285 2206 553138698 553139612 0.000000e+00 976.0
4 TraesCS1B01G410700 chr1B 96.947 131 2 1 2493 2623 637477035 637476907 5.520000e-53 219.0
5 TraesCS1B01G410700 chr1B 96.947 131 2 1 2621 2749 637477163 637477033 5.520000e-53 219.0
6 TraesCS1B01G410700 chr1B 87.895 190 10 2 1099 1288 637388734 637388558 9.240000e-51 211.0
7 TraesCS1B01G410700 chr1B 92.361 144 10 1 306 449 637394046 637393904 1.550000e-48 204.0
8 TraesCS1B01G410700 chr1B 91.667 84 2 2 766 844 637390813 637390730 9.640000e-21 111.0
9 TraesCS1B01G410700 chr1B 90.361 83 7 1 459 540 637393655 637393573 1.250000e-19 108.0
10 TraesCS1B01G410700 chr1D 92.271 1035 70 3 1285 2309 462358991 462357957 0.000000e+00 1459.0
11 TraesCS1B01G410700 chr1D 89.682 911 88 3 1285 2190 459818408 459817499 0.000000e+00 1157.0
12 TraesCS1B01G410700 chr1D 86.009 922 120 7 1285 2206 410495753 410496665 0.000000e+00 979.0
13 TraesCS1B01G410700 chr1D 93.207 633 39 2 1680 2312 462312978 462312350 0.000000e+00 928.0
14 TraesCS1B01G410700 chr1D 87.179 624 45 21 1096 1688 462329322 462328703 0.000000e+00 676.0
15 TraesCS1B01G410700 chr1D 84.045 539 58 11 2775 3288 462310741 462310206 8.200000e-136 494.0
16 TraesCS1B01G410700 chr1D 86.772 378 16 8 540 884 462329999 462329623 1.110000e-104 390.0
17 TraesCS1B01G410700 chr1D 92.377 223 17 0 306 528 462365369 462365147 5.290000e-83 318.0
18 TraesCS1B01G410700 chr1D 90.909 198 12 2 1096 1287 462359216 462359019 9.050000e-66 261.0
19 TraesCS1B01G410700 chr1D 90.256 195 13 2 2310 2503 462311126 462310937 1.960000e-62 250.0
20 TraesCS1B01G410700 chr1D 92.361 144 10 1 306 449 462330944 462330802 1.550000e-48 204.0
21 TraesCS1B01G410700 chr1D 95.238 105 4 1 538 642 462364681 462364578 7.300000e-37 165.0
22 TraesCS1B01G410700 chr1D 92.391 92 6 1 2495 2585 462310831 462310740 2.660000e-26 130.0
23 TraesCS1B01G410700 chr1D 91.304 92 7 1 2623 2713 462310831 462310740 1.240000e-24 124.0
24 TraesCS1B01G410700 chr1D 93.333 45 3 0 903 947 462329580 462329536 2.120000e-07 67.6
25 TraesCS1B01G410700 chr1A 86.929 941 113 8 1285 2222 506541325 506542258 0.000000e+00 1048.0
26 TraesCS1B01G410700 chr1A 88.312 693 28 21 642 1288 554111259 554110574 0.000000e+00 782.0
27 TraesCS1B01G410700 chr1A 84.570 337 24 8 306 642 554127146 554126838 3.190000e-80 309.0
28 TraesCS1B01G410700 chr1A 90.452 199 13 2 1096 1288 554090427 554090229 1.170000e-64 257.0
29 TraesCS1B01G410700 chr1A 97.727 44 1 0 1048 1091 554090502 554090459 3.520000e-10 76.8
30 TraesCS1B01G410700 chr1A 95.238 42 2 0 452 493 535030093 535030134 2.120000e-07 67.6
31 TraesCS1B01G410700 chr3B 79.858 844 157 11 1285 2123 27035947 27036782 3.630000e-169 604.0
32 TraesCS1B01G410700 chr3D 79.879 825 157 8 1288 2107 10220344 10219524 2.180000e-166 595.0
33 TraesCS1B01G410700 chr2B 78.261 253 47 6 2976 3224 785749290 785749538 4.390000e-34 156.0
34 TraesCS1B01G410700 chr2B 92.857 42 3 0 452 493 782153970 782154011 9.850000e-06 62.1
35 TraesCS1B01G410700 chr2B 88.000 50 4 1 445 492 46419383 46419334 1.270000e-04 58.4
36 TraesCS1B01G410700 chr6B 76.587 252 48 7 2982 3224 466135037 466134788 9.580000e-26 128.0
37 TraesCS1B01G410700 chr6B 93.182 44 3 0 452 495 19358706 19358749 7.620000e-07 65.8
38 TraesCS1B01G410700 chr5D 90.698 43 4 0 451 493 92463360 92463318 1.270000e-04 58.4
39 TraesCS1B01G410700 chr5B 90.698 43 4 0 451 493 536836112 536836154 1.270000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G410700 chr1B 637476368 637479655 3287 True 2170.0 6072 97.964667 1 3288 3 chr1B.!!$R2 3287
1 TraesCS1B01G410700 chr1B 631825055 631825932 877 False 1050.0 1050 88.269000 1285 2161 1 chr1B.!!$F2 876
2 TraesCS1B01G410700 chr1B 553138698 553139612 914 False 976.0 976 85.900000 1285 2206 1 chr1B.!!$F1 921
3 TraesCS1B01G410700 chr1B 637387418 637394046 6628 True 434.6 1539 90.739000 306 2424 5 chr1B.!!$R1 2118
4 TraesCS1B01G410700 chr1D 459817499 459818408 909 True 1157.0 1157 89.682000 1285 2190 1 chr1D.!!$R1 905
5 TraesCS1B01G410700 chr1D 410495753 410496665 912 False 979.0 979 86.009000 1285 2206 1 chr1D.!!$F1 921
6 TraesCS1B01G410700 chr1D 462357957 462359216 1259 True 860.0 1459 91.590000 1096 2309 2 chr1D.!!$R4 1213
7 TraesCS1B01G410700 chr1D 462310206 462312978 2772 True 385.2 928 90.240600 1680 3288 5 chr1D.!!$R2 1608
8 TraesCS1B01G410700 chr1D 462328703 462330944 2241 True 334.4 676 89.911250 306 1688 4 chr1D.!!$R3 1382
9 TraesCS1B01G410700 chr1D 462364578 462365369 791 True 241.5 318 93.807500 306 642 2 chr1D.!!$R5 336
10 TraesCS1B01G410700 chr1A 506541325 506542258 933 False 1048.0 1048 86.929000 1285 2222 1 chr1A.!!$F1 937
11 TraesCS1B01G410700 chr1A 554110574 554111259 685 True 782.0 782 88.312000 642 1288 1 chr1A.!!$R1 646
12 TraesCS1B01G410700 chr3B 27035947 27036782 835 False 604.0 604 79.858000 1285 2123 1 chr3B.!!$F1 838
13 TraesCS1B01G410700 chr3D 10219524 10220344 820 True 595.0 595 79.879000 1288 2107 1 chr3D.!!$R1 819

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
243 244 0.030908 CCATAGGCGAGACGGAACTC 59.969 60.0 0.00 0.0 0.0 3.01 F
756 1510 0.038166 ATGCATGGACCGGTTCACTT 59.962 50.0 20.51 0.0 0.0 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1248 5834 1.006805 CATCGCCACGATCTCTCCC 60.007 63.158 0.0 0.0 45.19 4.30 R
2598 8573 0.242825 TCATTGTCGTCGTCCCACTC 59.757 55.000 0.0 0.0 0.00 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 3.000082 CGAAGGAAAGCTGGTGAAAAC 58.000 47.619 0.00 0.00 0.00 2.43
26 27 2.287608 CGAAGGAAAGCTGGTGAAAACC 60.288 50.000 0.00 0.00 0.00 3.27
27 28 2.452600 AGGAAAGCTGGTGAAAACCA 57.547 45.000 0.00 0.00 38.25 3.67
28 29 2.745968 AGGAAAGCTGGTGAAAACCAA 58.254 42.857 0.00 0.00 39.61 3.67
29 30 3.103742 AGGAAAGCTGGTGAAAACCAAA 58.896 40.909 0.00 0.00 39.61 3.28
30 31 3.132824 AGGAAAGCTGGTGAAAACCAAAG 59.867 43.478 0.00 0.00 39.61 2.77
31 32 3.132111 GGAAAGCTGGTGAAAACCAAAGA 59.868 43.478 0.00 0.00 39.61 2.52
32 33 4.382577 GGAAAGCTGGTGAAAACCAAAGAA 60.383 41.667 0.00 0.00 39.61 2.52
33 34 4.817318 AAGCTGGTGAAAACCAAAGAAA 57.183 36.364 0.00 0.00 39.61 2.52
34 35 4.391405 AGCTGGTGAAAACCAAAGAAAG 57.609 40.909 0.00 0.00 39.61 2.62
35 36 4.023291 AGCTGGTGAAAACCAAAGAAAGA 58.977 39.130 0.00 0.00 39.61 2.52
36 37 4.466015 AGCTGGTGAAAACCAAAGAAAGAA 59.534 37.500 0.00 0.00 39.61 2.52
37 38 5.046663 AGCTGGTGAAAACCAAAGAAAGAAA 60.047 36.000 0.00 0.00 39.61 2.52
38 39 5.063438 GCTGGTGAAAACCAAAGAAAGAAAC 59.937 40.000 0.00 0.00 39.61 2.78
39 40 6.102897 TGGTGAAAACCAAAGAAAGAAACA 57.897 33.333 0.00 0.00 36.74 2.83
40 41 6.525629 TGGTGAAAACCAAAGAAAGAAACAA 58.474 32.000 0.00 0.00 36.74 2.83
41 42 6.992715 TGGTGAAAACCAAAGAAAGAAACAAA 59.007 30.769 0.00 0.00 36.74 2.83
42 43 7.499232 TGGTGAAAACCAAAGAAAGAAACAAAA 59.501 29.630 0.00 0.00 36.74 2.44
43 44 8.346300 GGTGAAAACCAAAGAAAGAAACAAAAA 58.654 29.630 0.00 0.00 0.00 1.94
62 63 5.394224 AAAAACGGAGAAAAACACAAGGA 57.606 34.783 0.00 0.00 0.00 3.36
63 64 5.394224 AAAACGGAGAAAAACACAAGGAA 57.606 34.783 0.00 0.00 0.00 3.36
64 65 5.394224 AAACGGAGAAAAACACAAGGAAA 57.606 34.783 0.00 0.00 0.00 3.13
65 66 5.394224 AACGGAGAAAAACACAAGGAAAA 57.606 34.783 0.00 0.00 0.00 2.29
66 67 4.740268 ACGGAGAAAAACACAAGGAAAAC 58.260 39.130 0.00 0.00 0.00 2.43
67 68 4.461431 ACGGAGAAAAACACAAGGAAAACT 59.539 37.500 0.00 0.00 0.00 2.66
68 69 4.798387 CGGAGAAAAACACAAGGAAAACTG 59.202 41.667 0.00 0.00 0.00 3.16
69 70 5.392595 CGGAGAAAAACACAAGGAAAACTGA 60.393 40.000 0.00 0.00 0.00 3.41
70 71 6.036470 GGAGAAAAACACAAGGAAAACTGAG 58.964 40.000 0.00 0.00 0.00 3.35
71 72 5.965922 AGAAAAACACAAGGAAAACTGAGG 58.034 37.500 0.00 0.00 0.00 3.86
72 73 5.714806 AGAAAAACACAAGGAAAACTGAGGA 59.285 36.000 0.00 0.00 0.00 3.71
73 74 5.993748 AAAACACAAGGAAAACTGAGGAA 57.006 34.783 0.00 0.00 0.00 3.36
74 75 5.993748 AAACACAAGGAAAACTGAGGAAA 57.006 34.783 0.00 0.00 0.00 3.13
75 76 5.993748 AACACAAGGAAAACTGAGGAAAA 57.006 34.783 0.00 0.00 0.00 2.29
76 77 5.993748 ACACAAGGAAAACTGAGGAAAAA 57.006 34.783 0.00 0.00 0.00 1.94
77 78 6.544928 ACACAAGGAAAACTGAGGAAAAAT 57.455 33.333 0.00 0.00 0.00 1.82
78 79 6.340522 ACACAAGGAAAACTGAGGAAAAATG 58.659 36.000 0.00 0.00 0.00 2.32
79 80 6.154363 ACACAAGGAAAACTGAGGAAAAATGA 59.846 34.615 0.00 0.00 0.00 2.57
80 81 7.041107 CACAAGGAAAACTGAGGAAAAATGAA 58.959 34.615 0.00 0.00 0.00 2.57
81 82 7.548780 CACAAGGAAAACTGAGGAAAAATGAAA 59.451 33.333 0.00 0.00 0.00 2.69
82 83 8.100164 ACAAGGAAAACTGAGGAAAAATGAAAA 58.900 29.630 0.00 0.00 0.00 2.29
83 84 8.606602 CAAGGAAAACTGAGGAAAAATGAAAAG 58.393 33.333 0.00 0.00 0.00 2.27
84 85 8.078060 AGGAAAACTGAGGAAAAATGAAAAGA 57.922 30.769 0.00 0.00 0.00 2.52
85 86 8.539544 AGGAAAACTGAGGAAAAATGAAAAGAA 58.460 29.630 0.00 0.00 0.00 2.52
86 87 9.161629 GGAAAACTGAGGAAAAATGAAAAGAAA 57.838 29.630 0.00 0.00 0.00 2.52
90 91 8.722480 ACTGAGGAAAAATGAAAAGAAAAAGG 57.278 30.769 0.00 0.00 0.00 3.11
91 92 7.770433 ACTGAGGAAAAATGAAAAGAAAAAGGG 59.230 33.333 0.00 0.00 0.00 3.95
92 93 7.856415 TGAGGAAAAATGAAAAGAAAAAGGGA 58.144 30.769 0.00 0.00 0.00 4.20
93 94 8.325046 TGAGGAAAAATGAAAAGAAAAAGGGAA 58.675 29.630 0.00 0.00 0.00 3.97
94 95 9.173021 GAGGAAAAATGAAAAGAAAAAGGGAAA 57.827 29.630 0.00 0.00 0.00 3.13
95 96 9.527157 AGGAAAAATGAAAAGAAAAAGGGAAAA 57.473 25.926 0.00 0.00 0.00 2.29
133 134 8.941127 CGAAGGAAAACAAAATGAAACAAAAA 57.059 26.923 0.00 0.00 0.00 1.94
160 161 6.494893 AAAGCAAAGAAACCAAAGAAAACC 57.505 33.333 0.00 0.00 0.00 3.27
161 162 5.159273 AGCAAAGAAACCAAAGAAAACCA 57.841 34.783 0.00 0.00 0.00 3.67
162 163 5.744171 AGCAAAGAAACCAAAGAAAACCAT 58.256 33.333 0.00 0.00 0.00 3.55
163 164 5.585844 AGCAAAGAAACCAAAGAAAACCATG 59.414 36.000 0.00 0.00 0.00 3.66
164 165 5.730289 GCAAAGAAACCAAAGAAAACCATGC 60.730 40.000 0.00 0.00 0.00 4.06
165 166 4.751767 AGAAACCAAAGAAAACCATGCA 57.248 36.364 0.00 0.00 0.00 3.96
166 167 5.096443 AGAAACCAAAGAAAACCATGCAA 57.904 34.783 0.00 0.00 0.00 4.08
167 168 5.495640 AGAAACCAAAGAAAACCATGCAAA 58.504 33.333 0.00 0.00 0.00 3.68
168 169 5.942826 AGAAACCAAAGAAAACCATGCAAAA 59.057 32.000 0.00 0.00 0.00 2.44
169 170 5.559427 AACCAAAGAAAACCATGCAAAAC 57.441 34.783 0.00 0.00 0.00 2.43
170 171 4.583871 ACCAAAGAAAACCATGCAAAACA 58.416 34.783 0.00 0.00 0.00 2.83
171 172 4.635324 ACCAAAGAAAACCATGCAAAACAG 59.365 37.500 0.00 0.00 0.00 3.16
172 173 4.635324 CCAAAGAAAACCATGCAAAACAGT 59.365 37.500 0.00 0.00 0.00 3.55
173 174 5.447548 CCAAAGAAAACCATGCAAAACAGTG 60.448 40.000 0.00 0.00 0.00 3.66
174 175 3.795877 AGAAAACCATGCAAAACAGTGG 58.204 40.909 0.11 0.11 34.77 4.00
175 176 3.450457 AGAAAACCATGCAAAACAGTGGA 59.550 39.130 8.74 0.00 33.58 4.02
176 177 3.902881 AAACCATGCAAAACAGTGGAA 57.097 38.095 8.74 0.00 33.58 3.53
177 178 2.888834 ACCATGCAAAACAGTGGAAC 57.111 45.000 8.74 0.00 33.58 3.62
178 179 1.412343 ACCATGCAAAACAGTGGAACC 59.588 47.619 8.74 0.00 37.80 3.62
179 180 1.602668 CCATGCAAAACAGTGGAACCG 60.603 52.381 0.00 0.00 37.80 4.44
180 181 1.336440 CATGCAAAACAGTGGAACCGA 59.664 47.619 0.00 0.00 37.80 4.69
181 182 1.464734 TGCAAAACAGTGGAACCGAA 58.535 45.000 0.00 0.00 37.80 4.30
182 183 1.819288 TGCAAAACAGTGGAACCGAAA 59.181 42.857 0.00 0.00 37.80 3.46
183 184 2.231478 TGCAAAACAGTGGAACCGAAAA 59.769 40.909 0.00 0.00 37.80 2.29
184 185 3.254892 GCAAAACAGTGGAACCGAAAAA 58.745 40.909 0.00 0.00 37.80 1.94
185 186 3.868661 GCAAAACAGTGGAACCGAAAAAT 59.131 39.130 0.00 0.00 37.80 1.82
186 187 4.331443 GCAAAACAGTGGAACCGAAAAATT 59.669 37.500 0.00 0.00 37.80 1.82
187 188 5.726413 GCAAAACAGTGGAACCGAAAAATTG 60.726 40.000 0.00 0.00 37.80 2.32
188 189 3.726291 ACAGTGGAACCGAAAAATTGG 57.274 42.857 0.00 0.00 37.80 3.16
189 190 3.028130 ACAGTGGAACCGAAAAATTGGT 58.972 40.909 0.00 0.00 41.20 3.67
190 191 3.181480 ACAGTGGAACCGAAAAATTGGTG 60.181 43.478 0.00 0.00 38.82 4.17
191 192 2.131972 GTGGAACCGAAAAATTGGTGC 58.868 47.619 0.00 0.00 38.82 5.01
192 193 2.035632 TGGAACCGAAAAATTGGTGCT 58.964 42.857 0.00 0.00 38.82 4.40
193 194 2.223923 TGGAACCGAAAAATTGGTGCTG 60.224 45.455 0.00 0.00 38.82 4.41
194 195 1.792367 GAACCGAAAAATTGGTGCTGC 59.208 47.619 0.00 0.00 38.82 5.25
195 196 0.749649 ACCGAAAAATTGGTGCTGCA 59.250 45.000 0.00 0.00 37.02 4.41
196 197 1.269726 ACCGAAAAATTGGTGCTGCAG 60.270 47.619 10.11 10.11 37.02 4.41
197 198 1.269726 CCGAAAAATTGGTGCTGCAGT 60.270 47.619 16.64 0.00 0.00 4.40
198 199 2.030363 CCGAAAAATTGGTGCTGCAGTA 60.030 45.455 16.64 8.31 0.00 2.74
199 200 3.551863 CCGAAAAATTGGTGCTGCAGTAA 60.552 43.478 16.64 6.45 0.00 2.24
200 201 4.047822 CGAAAAATTGGTGCTGCAGTAAA 58.952 39.130 16.64 3.23 0.00 2.01
201 202 4.148696 CGAAAAATTGGTGCTGCAGTAAAG 59.851 41.667 16.64 0.00 0.00 1.85
202 203 3.665745 AAATTGGTGCTGCAGTAAAGG 57.334 42.857 16.64 0.00 0.00 3.11
203 204 1.549203 ATTGGTGCTGCAGTAAAGGG 58.451 50.000 16.64 0.00 0.00 3.95
204 205 0.184933 TTGGTGCTGCAGTAAAGGGT 59.815 50.000 16.64 0.00 0.00 4.34
205 206 0.250727 TGGTGCTGCAGTAAAGGGTC 60.251 55.000 16.64 0.00 0.00 4.46
206 207 1.298859 GGTGCTGCAGTAAAGGGTCG 61.299 60.000 16.64 0.00 0.00 4.79
207 208 1.003839 TGCTGCAGTAAAGGGTCGG 60.004 57.895 16.64 0.00 0.00 4.79
208 209 2.399356 GCTGCAGTAAAGGGTCGGC 61.399 63.158 16.64 0.00 0.00 5.54
209 210 1.745489 CTGCAGTAAAGGGTCGGCC 60.745 63.158 5.25 0.00 0.00 6.13
219 220 4.857251 GGTCGGCCCATTAGAGTG 57.143 61.111 0.00 0.00 0.00 3.51
220 221 1.523938 GGTCGGCCCATTAGAGTGC 60.524 63.158 0.00 0.00 0.00 4.40
221 222 1.523938 GTCGGCCCATTAGAGTGCC 60.524 63.158 0.00 0.00 40.54 5.01
222 223 2.203209 CGGCCCATTAGAGTGCCC 60.203 66.667 0.00 0.00 40.87 5.36
223 224 2.203209 GGCCCATTAGAGTGCCCG 60.203 66.667 0.00 0.00 37.94 6.13
224 225 2.902343 GCCCATTAGAGTGCCCGC 60.902 66.667 0.00 0.00 0.00 6.13
225 226 2.203209 CCCATTAGAGTGCCCGCC 60.203 66.667 0.00 0.00 0.00 6.13
226 227 2.589540 CCATTAGAGTGCCCGCCA 59.410 61.111 0.00 0.00 0.00 5.69
227 228 1.149174 CCATTAGAGTGCCCGCCAT 59.851 57.895 0.00 0.00 0.00 4.40
228 229 0.396435 CCATTAGAGTGCCCGCCATA 59.604 55.000 0.00 0.00 0.00 2.74
229 230 1.609061 CCATTAGAGTGCCCGCCATAG 60.609 57.143 0.00 0.00 0.00 2.23
230 231 0.687354 ATTAGAGTGCCCGCCATAGG 59.313 55.000 0.00 0.00 0.00 2.57
240 241 2.812499 GCCATAGGCGAGACGGAA 59.188 61.111 0.00 0.00 39.62 4.30
241 242 1.591863 GCCATAGGCGAGACGGAAC 60.592 63.158 0.00 0.00 39.62 3.62
242 243 2.017559 GCCATAGGCGAGACGGAACT 62.018 60.000 0.00 0.00 39.62 3.01
243 244 0.030908 CCATAGGCGAGACGGAACTC 59.969 60.000 0.00 0.00 0.00 3.01
244 245 1.025812 CATAGGCGAGACGGAACTCT 58.974 55.000 0.00 0.00 35.06 3.24
245 246 1.025812 ATAGGCGAGACGGAACTCTG 58.974 55.000 0.00 0.00 35.06 3.35
246 247 1.654954 TAGGCGAGACGGAACTCTGC 61.655 60.000 0.00 0.00 36.51 4.26
247 248 2.569134 GCGAGACGGAACTCTGCT 59.431 61.111 0.00 0.00 35.42 4.24
248 249 1.515304 GCGAGACGGAACTCTGCTC 60.515 63.158 0.00 0.00 35.42 4.26
249 250 1.226156 CGAGACGGAACTCTGCTCG 60.226 63.158 13.88 13.88 40.00 5.03
250 251 1.515304 GAGACGGAACTCTGCTCGC 60.515 63.158 0.00 0.00 34.47 5.03
251 252 2.201436 GAGACGGAACTCTGCTCGCA 62.201 60.000 0.00 0.00 34.47 5.10
252 253 1.372997 GACGGAACTCTGCTCGCAA 60.373 57.895 0.00 0.00 0.00 4.85
253 254 0.737715 GACGGAACTCTGCTCGCAAT 60.738 55.000 0.00 0.00 0.00 3.56
254 255 1.016130 ACGGAACTCTGCTCGCAATG 61.016 55.000 0.00 0.00 0.00 2.82
255 256 1.699656 CGGAACTCTGCTCGCAATGG 61.700 60.000 0.00 0.00 0.00 3.16
256 257 1.372087 GGAACTCTGCTCGCAATGGG 61.372 60.000 0.00 0.00 0.00 4.00
257 258 0.674895 GAACTCTGCTCGCAATGGGT 60.675 55.000 0.00 0.00 0.00 4.51
258 259 0.957395 AACTCTGCTCGCAATGGGTG 60.957 55.000 0.00 0.00 0.00 4.61
259 260 1.078918 CTCTGCTCGCAATGGGTGA 60.079 57.895 3.54 0.00 34.20 4.02
260 261 0.463295 CTCTGCTCGCAATGGGTGAT 60.463 55.000 3.54 0.00 35.02 3.06
261 262 0.829990 TCTGCTCGCAATGGGTGATA 59.170 50.000 3.54 0.00 35.02 2.15
262 263 1.417517 TCTGCTCGCAATGGGTGATAT 59.582 47.619 3.54 0.00 35.02 1.63
263 264 2.632512 TCTGCTCGCAATGGGTGATATA 59.367 45.455 3.54 0.00 35.02 0.86
264 265 3.261643 TCTGCTCGCAATGGGTGATATAT 59.738 43.478 3.54 0.00 35.02 0.86
265 266 4.466015 TCTGCTCGCAATGGGTGATATATA 59.534 41.667 3.54 0.00 35.02 0.86
266 267 5.046663 TCTGCTCGCAATGGGTGATATATAA 60.047 40.000 3.54 0.00 35.02 0.98
267 268 4.935205 TGCTCGCAATGGGTGATATATAAC 59.065 41.667 3.54 0.00 35.02 1.89
268 269 5.178797 GCTCGCAATGGGTGATATATAACT 58.821 41.667 3.54 0.00 35.02 2.24
269 270 5.292101 GCTCGCAATGGGTGATATATAACTC 59.708 44.000 3.54 0.00 35.02 3.01
270 271 6.605471 TCGCAATGGGTGATATATAACTCT 57.395 37.500 1.61 0.00 0.00 3.24
271 272 6.398095 TCGCAATGGGTGATATATAACTCTG 58.602 40.000 1.61 0.00 0.00 3.35
272 273 5.582269 CGCAATGGGTGATATATAACTCTGG 59.418 44.000 1.61 0.00 0.00 3.86
273 274 5.355350 GCAATGGGTGATATATAACTCTGGC 59.645 44.000 1.61 0.00 0.00 4.85
274 275 6.475504 CAATGGGTGATATATAACTCTGGCA 58.524 40.000 1.61 0.00 0.00 4.92
275 276 6.702449 ATGGGTGATATATAACTCTGGCAA 57.298 37.500 1.61 0.00 0.00 4.52
276 277 6.508030 TGGGTGATATATAACTCTGGCAAA 57.492 37.500 1.61 0.00 0.00 3.68
277 278 6.533730 TGGGTGATATATAACTCTGGCAAAG 58.466 40.000 1.61 0.00 0.00 2.77
278 279 6.328934 TGGGTGATATATAACTCTGGCAAAGA 59.671 38.462 1.61 0.00 0.00 2.52
279 280 7.017551 TGGGTGATATATAACTCTGGCAAAGAT 59.982 37.037 1.61 0.00 33.29 2.40
280 281 8.540388 GGGTGATATATAACTCTGGCAAAGATA 58.460 37.037 0.00 0.00 33.29 1.98
288 289 6.506500 AACTCTGGCAAAGATATTGAAGTG 57.493 37.500 0.00 0.00 33.29 3.16
289 290 5.564550 ACTCTGGCAAAGATATTGAAGTGT 58.435 37.500 0.00 0.00 33.29 3.55
290 291 5.645497 ACTCTGGCAAAGATATTGAAGTGTC 59.355 40.000 0.00 0.00 33.29 3.67
291 292 4.943705 TCTGGCAAAGATATTGAAGTGTCC 59.056 41.667 0.00 0.00 0.00 4.02
292 293 4.661222 TGGCAAAGATATTGAAGTGTCCA 58.339 39.130 0.00 0.00 0.00 4.02
293 294 4.458989 TGGCAAAGATATTGAAGTGTCCAC 59.541 41.667 0.00 0.00 0.00 4.02
294 295 4.458989 GGCAAAGATATTGAAGTGTCCACA 59.541 41.667 0.00 0.00 0.00 4.17
295 296 5.393962 GCAAAGATATTGAAGTGTCCACAC 58.606 41.667 1.28 1.28 46.77 3.82
329 330 6.251549 GTCTTTTTCTGGAATACGCAATCTC 58.748 40.000 0.00 0.00 0.00 2.75
440 441 1.014564 GCACTCCCTCCGTTCGAAAG 61.015 60.000 0.00 0.51 0.00 2.62
441 442 1.014564 CACTCCCTCCGTTCGAAAGC 61.015 60.000 0.00 0.00 0.00 3.51
450 451 0.718220 CGTTCGAAAGCAAGTGTCGC 60.718 55.000 0.00 0.00 34.80 5.19
451 452 0.582005 GTTCGAAAGCAAGTGTCGCT 59.418 50.000 0.00 0.00 42.98 4.93
466 714 3.064271 GTGTCGCTTGAACTAAAACCACA 59.936 43.478 0.00 0.00 0.00 4.17
512 761 9.490379 GGGAGTACTATAATGTGTAGATTTTGG 57.510 37.037 0.00 0.00 0.00 3.28
528 777 9.106070 GTAGATTTTGGTTCTATATTCGTTGGT 57.894 33.333 0.00 0.00 0.00 3.67
532 789 2.033151 GGTTCTATATTCGTTGGTGCGC 60.033 50.000 0.00 0.00 0.00 6.09
561 1289 8.950403 AAATACTTAAAATGACGACAAAGCTC 57.050 30.769 0.00 0.00 0.00 4.09
581 1309 4.038642 GCTCACTCAAAACCCACCATTTTA 59.961 41.667 0.00 0.00 0.00 1.52
689 1443 2.255172 TACGCCTTTTGCACACCGG 61.255 57.895 0.00 0.00 41.33 5.28
756 1510 0.038166 ATGCATGGACCGGTTCACTT 59.962 50.000 20.51 0.00 0.00 3.16
764 3575 1.535462 GACCGGTTCACTTTCACCATG 59.465 52.381 9.42 0.00 31.84 3.66
840 3655 2.000447 GTACATCTGGACGCAAGGAAC 59.000 52.381 0.00 0.00 46.39 3.62
841 5311 6.648339 CAGTACATCTGGACGCAAGGAACT 62.648 50.000 0.00 0.00 39.86 3.01
842 5312 1.899814 ACATCTGGACGCAAGGAACTA 59.100 47.619 0.00 0.00 38.49 2.24
884 5361 2.902523 AGCTTAGGCCTAACGCTTAAC 58.097 47.619 29.04 13.06 34.36 2.01
885 5362 2.737679 AGCTTAGGCCTAACGCTTAACG 60.738 50.000 29.04 17.22 43.61 3.18
886 5363 5.839244 AGCTTAGGCCTAACGCTTAACGG 62.839 52.174 29.04 16.67 42.73 4.44
901 5402 5.233689 CGCTTAACGGAGGAAACCTAATTAG 59.766 44.000 5.43 5.43 38.44 1.73
958 5486 0.618968 AGATTTCCTCCGTCCTGGCT 60.619 55.000 0.00 0.00 37.80 4.75
1007 5535 1.337635 GGCCTTGTGTGTGAGAGAGAG 60.338 57.143 0.00 0.00 0.00 3.20
1038 5590 0.250553 CTCTCCCTCCGTCTAGCGAT 60.251 60.000 7.94 0.00 44.77 4.58
1043 5595 0.589223 CCTCCGTCTAGCGATCAGTC 59.411 60.000 7.94 0.00 44.77 3.51
1079 5632 0.108138 AAGGATTTGTCTCGGCGAGG 60.108 55.000 33.93 17.24 0.00 4.63
1272 5858 0.807667 AGATCGTGGCGATGAAGTGC 60.808 55.000 8.82 0.00 47.00 4.40
1926 6543 0.106819 CTGAGGCCAGGATCAAAGGG 60.107 60.000 5.01 0.00 36.77 3.95
1959 6576 0.035458 CAGAGGCTGGTTTCGAGGTT 59.965 55.000 0.00 0.00 0.00 3.50
2001 6618 1.984570 CCCGGAGAAGAGGCTCACA 60.985 63.158 18.26 0.00 36.62 3.58
2077 6694 5.632347 GCAAAGAGTTGATTGATGAAAGTGG 59.368 40.000 0.00 0.00 36.83 4.00
2098 6717 4.877823 TGGACAATCTACAATGCATCTGAC 59.122 41.667 0.00 0.00 0.00 3.51
2195 6826 1.406069 GGAGCTGTTCGTGTGGATCAT 60.406 52.381 0.00 0.00 0.00 2.45
2206 6837 3.531073 TGGATCATCACCACACACG 57.469 52.632 0.00 0.00 32.03 4.49
2392 8252 7.831691 TTTGTCCAATTTTCCAGTAATCTGA 57.168 32.000 0.00 0.00 43.76 3.27
2401 8261 9.710900 AATTTTCCAGTAATCTGAAATCAAACC 57.289 29.630 0.00 0.00 43.76 3.27
2402 8262 6.494893 TTCCAGTAATCTGAAATCAAACCG 57.505 37.500 0.00 0.00 43.76 4.44
2403 8263 5.800296 TCCAGTAATCTGAAATCAAACCGA 58.200 37.500 0.00 0.00 43.76 4.69
2404 8264 6.414732 TCCAGTAATCTGAAATCAAACCGAT 58.585 36.000 0.00 0.00 43.76 4.18
2409 8269 9.193133 AGTAATCTGAAATCAAACCGATATACG 57.807 33.333 0.00 0.00 42.18 3.06
2440 8300 8.263854 ACAACTAGTTTACTATGCCCATCTAT 57.736 34.615 5.07 0.00 0.00 1.98
2445 8305 9.778741 CTAGTTTACTATGCCCATCTATTCAAA 57.221 33.333 0.00 0.00 0.00 2.69
2455 8315 5.649557 CCCATCTATTCAAAATTTGACGCA 58.350 37.500 8.06 0.00 39.87 5.24
2461 8321 3.103447 TCAAAATTTGACGCATTGCCA 57.897 38.095 4.03 0.00 34.08 4.92
2470 8330 1.949525 GACGCATTGCCATGGATAAGT 59.050 47.619 18.40 6.83 0.00 2.24
2513 8488 7.869937 CGAGAGTGAATGAGACAATATATGGTT 59.130 37.037 0.00 0.00 0.00 3.67
2575 8550 8.107095 TGTAAGGGCTAATTGTCTAACTTGAAT 58.893 33.333 0.00 0.00 0.00 2.57
2587 8562 8.725405 TGTCTAACTTGAATTAAGAACACACA 57.275 30.769 0.00 0.00 39.76 3.72
2588 8563 9.337396 TGTCTAACTTGAATTAAGAACACACAT 57.663 29.630 0.00 0.00 39.76 3.21
2606 8581 9.998106 AACACACATAATTATATAGAGTGGGAC 57.002 33.333 17.45 0.00 33.43 4.46
2607 8582 8.304596 ACACACATAATTATATAGAGTGGGACG 58.695 37.037 17.45 7.00 33.43 4.79
2608 8583 8.520351 CACACATAATTATATAGAGTGGGACGA 58.480 37.037 14.11 0.00 30.87 4.20
2609 8584 8.521176 ACACATAATTATATAGAGTGGGACGAC 58.479 37.037 14.11 0.00 0.00 4.34
2610 8585 7.696872 CACATAATTATATAGAGTGGGACGACG 59.303 40.741 0.00 0.00 0.00 5.12
2611 8586 7.609146 ACATAATTATATAGAGTGGGACGACGA 59.391 37.037 0.00 0.00 0.00 4.20
2612 8587 5.876612 ATTATATAGAGTGGGACGACGAC 57.123 43.478 0.00 0.00 0.00 4.34
2613 8588 2.696989 TATAGAGTGGGACGACGACA 57.303 50.000 0.00 0.00 0.00 4.35
2614 8589 1.830279 ATAGAGTGGGACGACGACAA 58.170 50.000 0.00 0.00 0.00 3.18
2615 8590 1.830279 TAGAGTGGGACGACGACAAT 58.170 50.000 0.00 0.00 0.00 2.71
2616 8591 0.243907 AGAGTGGGACGACGACAATG 59.756 55.000 0.00 0.00 0.00 2.82
2617 8592 0.242825 GAGTGGGACGACGACAATGA 59.757 55.000 0.00 0.00 0.00 2.57
2618 8593 0.895530 AGTGGGACGACGACAATGAT 59.104 50.000 0.00 0.00 0.00 2.45
2619 8594 1.275291 AGTGGGACGACGACAATGATT 59.725 47.619 0.00 0.00 0.00 2.57
2620 8595 1.393539 GTGGGACGACGACAATGATTG 59.606 52.381 0.00 3.16 0.00 2.67
2622 8597 1.393539 GGGACGACGACAATGATTGTG 59.606 52.381 16.52 10.37 45.52 3.33
2623 8598 2.333926 GGACGACGACAATGATTGTGA 58.666 47.619 16.52 0.00 45.52 3.58
2624 8599 2.734606 GGACGACGACAATGATTGTGAA 59.265 45.455 16.52 0.00 45.52 3.18
2625 8600 3.370978 GGACGACGACAATGATTGTGAAT 59.629 43.478 16.52 0.24 45.52 2.57
2626 8601 4.326205 GACGACGACAATGATTGTGAATG 58.674 43.478 16.52 5.69 45.52 2.67
2627 8602 3.993736 ACGACGACAATGATTGTGAATGA 59.006 39.130 16.52 0.00 45.52 2.57
2628 8603 4.091945 ACGACGACAATGATTGTGAATGAG 59.908 41.667 16.52 4.79 45.52 2.90
2629 8604 4.327087 CGACGACAATGATTGTGAATGAGA 59.673 41.667 16.52 0.00 45.52 3.27
2630 8605 5.536554 ACGACAATGATTGTGAATGAGAC 57.463 39.130 16.52 0.00 45.52 3.36
2631 8606 4.996758 ACGACAATGATTGTGAATGAGACA 59.003 37.500 16.52 0.00 45.52 3.41
2632 8607 5.469760 ACGACAATGATTGTGAATGAGACAA 59.530 36.000 16.52 0.00 45.52 3.18
2633 8608 6.149973 ACGACAATGATTGTGAATGAGACAAT 59.850 34.615 16.52 0.00 45.52 2.71
2634 8609 7.334171 ACGACAATGATTGTGAATGAGACAATA 59.666 33.333 16.52 0.00 45.52 1.90
2635 8610 8.340443 CGACAATGATTGTGAATGAGACAATAT 58.660 33.333 16.52 0.00 45.52 1.28
2640 8615 9.803507 ATGATTGTGAATGAGACAATATATGGT 57.196 29.630 0.00 0.00 42.74 3.55
2641 8616 9.631257 TGATTGTGAATGAGACAATATATGGTT 57.369 29.630 0.00 0.00 42.74 3.67
2644 8619 9.898152 TTGTGAATGAGACAATATATGGTTACA 57.102 29.630 0.00 0.00 0.00 2.41
2655 8630 9.431887 ACAATATATGGTTACATTATGTCGACC 57.568 33.333 14.12 18.20 38.53 4.79
2656 8631 9.430623 CAATATATGGTTACATTATGTCGACCA 57.569 33.333 25.24 25.24 44.91 4.02
2659 8634 5.346181 TGGTTACATTATGTCGACCATGA 57.654 39.130 21.69 9.66 39.91 3.07
2660 8635 5.735766 TGGTTACATTATGTCGACCATGAA 58.264 37.500 21.69 8.26 39.91 2.57
2661 8636 6.353323 TGGTTACATTATGTCGACCATGAAT 58.647 36.000 21.69 8.17 39.91 2.57
2662 8637 7.501844 TGGTTACATTATGTCGACCATGAATA 58.498 34.615 21.69 7.30 39.91 1.75
2663 8638 8.154203 TGGTTACATTATGTCGACCATGAATAT 58.846 33.333 21.69 6.93 39.91 1.28
2664 8639 8.656849 GGTTACATTATGTCGACCATGAATATC 58.343 37.037 20.44 7.52 36.95 1.63
2665 8640 8.656849 GTTACATTATGTCGACCATGAATATCC 58.343 37.037 20.44 0.00 34.86 2.59
2666 8641 7.009179 ACATTATGTCGACCATGAATATCCT 57.991 36.000 20.44 0.63 34.86 3.24
2667 8642 6.875726 ACATTATGTCGACCATGAATATCCTG 59.124 38.462 20.44 9.61 34.86 3.86
2668 8643 6.664428 TTATGTCGACCATGAATATCCTGA 57.336 37.500 14.12 0.00 34.86 3.86
2669 8644 5.752036 ATGTCGACCATGAATATCCTGAT 57.248 39.130 14.12 0.00 30.69 2.90
2670 8645 6.857437 ATGTCGACCATGAATATCCTGATA 57.143 37.500 14.12 0.00 30.69 2.15
2671 8646 6.857437 TGTCGACCATGAATATCCTGATAT 57.143 37.500 14.12 0.00 35.63 1.63
2672 8647 7.244886 TGTCGACCATGAATATCCTGATATT 57.755 36.000 14.12 11.25 44.26 1.28
2673 8648 8.361169 TGTCGACCATGAATATCCTGATATTA 57.639 34.615 14.12 3.20 42.32 0.98
2674 8649 8.470002 TGTCGACCATGAATATCCTGATATTAG 58.530 37.037 14.12 6.12 42.32 1.73
2675 8650 8.470805 GTCGACCATGAATATCCTGATATTAGT 58.529 37.037 3.51 7.75 42.32 2.24
2676 8651 9.035890 TCGACCATGAATATCCTGATATTAGTT 57.964 33.333 11.38 0.00 42.32 2.24
2677 8652 9.658799 CGACCATGAATATCCTGATATTAGTTT 57.341 33.333 11.38 0.00 42.32 2.66
2699 8674 9.636789 AGTTTGTAAGGGTTAATTGTCTAACTT 57.363 29.630 0.00 0.00 33.17 2.66
2700 8675 9.673454 GTTTGTAAGGGTTAATTGTCTAACTTG 57.327 33.333 0.00 0.00 33.17 3.16
2701 8676 9.629878 TTTGTAAGGGTTAATTGTCTAACTTGA 57.370 29.630 0.00 0.00 33.17 3.02
2702 8677 9.629878 TTGTAAGGGTTAATTGTCTAACTTGAA 57.370 29.630 0.00 0.00 33.17 2.69
2703 8678 9.802039 TGTAAGGGTTAATTGTCTAACTTGAAT 57.198 29.630 0.00 0.00 33.17 2.57
2715 8690 8.725405 TGTCTAACTTGAATTAAGAACACACA 57.275 30.769 0.00 0.00 39.76 3.72
2716 8691 9.337396 TGTCTAACTTGAATTAAGAACACACAT 57.663 29.630 0.00 0.00 39.76 3.21
2732 8707 9.998106 AGAACACACATAATTATATAGTGGGAC 57.002 33.333 18.57 13.07 37.09 4.46
2733 8708 8.827177 AACACACATAATTATATAGTGGGACG 57.173 34.615 18.57 7.99 37.09 4.79
2734 8709 8.185506 ACACACATAATTATATAGTGGGACGA 57.814 34.615 18.57 0.00 37.09 4.20
2735 8710 8.086522 ACACACATAATTATATAGTGGGACGAC 58.913 37.037 18.57 0.00 37.09 4.34
2736 8711 7.272731 CACACATAATTATATAGTGGGACGACG 59.727 40.741 15.17 0.00 35.71 5.12
2737 8712 7.175467 ACACATAATTATATAGTGGGACGACGA 59.825 37.037 15.17 0.00 34.65 4.20
2738 8713 7.484007 CACATAATTATATAGTGGGACGACGAC 59.516 40.741 0.00 0.00 0.00 4.34
2739 8714 7.175467 ACATAATTATATAGTGGGACGACGACA 59.825 37.037 0.00 0.00 0.00 4.35
2740 8715 6.395426 AATTATATAGTGGGACGACGACAA 57.605 37.500 0.00 0.00 0.00 3.18
2741 8716 6.585695 ATTATATAGTGGGACGACGACAAT 57.414 37.500 0.00 0.00 0.00 2.71
2742 8717 4.931661 ATATAGTGGGACGACGACAATT 57.068 40.909 0.00 0.00 0.00 2.32
2743 8718 7.509141 TTATATAGTGGGACGACGACAATTA 57.491 36.000 0.00 0.00 0.00 1.40
2744 8719 4.931661 ATAGTGGGACGACGACAATTAT 57.068 40.909 0.00 0.00 0.00 1.28
2745 8720 3.604875 AGTGGGACGACGACAATTATT 57.395 42.857 0.00 0.00 0.00 1.40
2746 8721 3.259064 AGTGGGACGACGACAATTATTG 58.741 45.455 0.00 3.07 0.00 1.90
2748 8723 2.997303 TGGGACGACGACAATTATTGTG 59.003 45.455 15.83 10.04 45.52 3.33
2749 8724 2.222953 GGGACGACGACAATTATTGTGC 60.223 50.000 15.83 6.41 45.52 4.57
2750 8725 2.671396 GGACGACGACAATTATTGTGCT 59.329 45.455 15.83 0.00 45.52 4.40
2751 8726 3.483574 GGACGACGACAATTATTGTGCTG 60.484 47.826 15.83 7.54 45.52 4.41
2752 8727 3.064207 ACGACGACAATTATTGTGCTGT 58.936 40.909 15.83 10.57 45.52 4.40
2753 8728 3.122948 ACGACGACAATTATTGTGCTGTC 59.877 43.478 15.83 16.84 45.52 3.51
2754 8729 3.483574 CGACGACAATTATTGTGCTGTCC 60.484 47.826 15.83 0.00 45.52 4.02
2755 8730 3.674997 ACGACAATTATTGTGCTGTCCT 58.325 40.909 15.83 0.00 45.52 3.85
2756 8731 4.072131 ACGACAATTATTGTGCTGTCCTT 58.928 39.130 15.83 0.00 45.52 3.36
2757 8732 4.083324 ACGACAATTATTGTGCTGTCCTTG 60.083 41.667 15.83 0.00 45.52 3.61
2758 8733 4.154015 CGACAATTATTGTGCTGTCCTTGA 59.846 41.667 15.83 0.00 45.52 3.02
2759 8734 5.334802 CGACAATTATTGTGCTGTCCTTGAA 60.335 40.000 15.83 0.00 45.52 2.69
2760 8735 6.594788 ACAATTATTGTGCTGTCCTTGAAT 57.405 33.333 10.02 0.00 43.48 2.57
2761 8736 6.624423 ACAATTATTGTGCTGTCCTTGAATC 58.376 36.000 10.02 0.00 43.48 2.52
2762 8737 5.841957 ATTATTGTGCTGTCCTTGAATCC 57.158 39.130 0.00 0.00 0.00 3.01
2763 8738 2.957402 TTGTGCTGTCCTTGAATCCT 57.043 45.000 0.00 0.00 0.00 3.24
2764 8739 2.479566 TGTGCTGTCCTTGAATCCTC 57.520 50.000 0.00 0.00 0.00 3.71
2765 8740 1.980765 TGTGCTGTCCTTGAATCCTCT 59.019 47.619 0.00 0.00 0.00 3.69
2766 8741 2.027745 TGTGCTGTCCTTGAATCCTCTC 60.028 50.000 0.00 0.00 0.00 3.20
2767 8742 2.235898 GTGCTGTCCTTGAATCCTCTCT 59.764 50.000 0.00 0.00 0.00 3.10
2768 8743 2.909006 TGCTGTCCTTGAATCCTCTCTT 59.091 45.455 0.00 0.00 0.00 2.85
2769 8744 3.328931 TGCTGTCCTTGAATCCTCTCTTT 59.671 43.478 0.00 0.00 0.00 2.52
2770 8745 3.938334 GCTGTCCTTGAATCCTCTCTTTC 59.062 47.826 0.00 0.00 0.00 2.62
2771 8746 4.564406 GCTGTCCTTGAATCCTCTCTTTCA 60.564 45.833 0.00 0.00 0.00 2.69
2772 8747 5.555017 CTGTCCTTGAATCCTCTCTTTCAA 58.445 41.667 0.00 0.00 39.00 2.69
2784 8759 2.492484 TCTCTTTCAAGACCCTACGCTC 59.508 50.000 0.00 0.00 0.00 5.03
2841 8819 5.867174 TGTTGAACTCATTCCTACATGTACG 59.133 40.000 0.08 0.00 33.49 3.67
2848 8826 5.278604 TCATTCCTACATGTACGAACGATG 58.721 41.667 16.40 12.30 0.00 3.84
2849 8827 4.968812 TTCCTACATGTACGAACGATGA 57.031 40.909 11.76 0.00 0.00 2.92
2873 8851 5.385198 TCCTATTGCTTGTGAGTTTTCCTT 58.615 37.500 0.00 0.00 0.00 3.36
2882 8860 6.430000 GCTTGTGAGTTTTCCTTTAGGACATA 59.570 38.462 0.00 0.00 45.39 2.29
2883 8861 7.361286 GCTTGTGAGTTTTCCTTTAGGACATAG 60.361 40.741 0.00 0.00 45.39 2.23
2886 8864 7.444183 TGTGAGTTTTCCTTTAGGACATAGTTG 59.556 37.037 0.00 0.00 45.39 3.16
2907 8885 6.206829 AGTTGGTTTGTAGGATAGAAAAGCAC 59.793 38.462 0.00 0.00 35.48 4.40
2912 8890 8.789762 GGTTTGTAGGATAGAAAAGCACTTTTA 58.210 33.333 8.29 0.00 42.26 1.52
2937 8928 0.461163 TATGCACATCCCCGAACACG 60.461 55.000 0.00 0.00 0.00 4.49
2948 8939 0.110238 CCGAACACGCCATCAAAGTG 60.110 55.000 0.00 0.00 41.28 3.16
2967 8966 0.474660 GCATATCTCCCCCACCTCCT 60.475 60.000 0.00 0.00 0.00 3.69
2980 8979 3.842923 CTCCTGCCCGCTCGACAT 61.843 66.667 0.00 0.00 0.00 3.06
2984 8983 1.662608 CTGCCCGCTCGACATAGAT 59.337 57.895 0.00 0.00 0.00 1.98
2999 8998 5.012328 ACATAGATGTCGGAGAAGGAAAC 57.988 43.478 0.00 0.00 39.69 2.78
3007 9006 2.500098 TCGGAGAAGGAAACCATACCTG 59.500 50.000 0.00 0.00 36.56 4.00
3011 9010 4.080526 GGAGAAGGAAACCATACCTGCTAA 60.081 45.833 0.00 0.00 41.79 3.09
3014 9013 5.191722 AGAAGGAAACCATACCTGCTAATCA 59.808 40.000 0.00 0.00 40.12 2.57
3036 9035 1.673400 CAACCACGAATCCAACACACA 59.327 47.619 0.00 0.00 0.00 3.72
3037 9036 2.270352 ACCACGAATCCAACACACAT 57.730 45.000 0.00 0.00 0.00 3.21
3040 9040 3.007506 ACCACGAATCCAACACACATCTA 59.992 43.478 0.00 0.00 0.00 1.98
3046 9046 4.842531 ATCCAACACACATCTACCATCA 57.157 40.909 0.00 0.00 0.00 3.07
3062 9062 2.827800 ATCATTCAGATGTCGCCGAT 57.172 45.000 0.00 0.00 35.06 4.18
3090 9090 1.022735 CACAATCTGCATCTGCTCCC 58.977 55.000 3.53 0.00 42.66 4.30
3098 9098 1.676678 GCATCTGCTCCCGGACTACA 61.677 60.000 0.73 0.00 38.21 2.74
3108 9108 1.410004 CCGGACTACATCCCAAGCTA 58.590 55.000 0.00 0.00 46.04 3.32
3130 9130 1.159713 TGCTGACACTGGAGCAAACG 61.160 55.000 0.00 0.00 42.22 3.60
3143 9143 4.916273 AAACGTTGCCGCAACCGC 62.916 61.111 26.58 6.41 40.82 5.68
3162 9162 1.238439 CGGATGCCAAAGACACAAGT 58.762 50.000 0.00 0.00 0.00 3.16
3172 9172 2.799126 AGACACAAGTCCACCACAAA 57.201 45.000 0.00 0.00 46.15 2.83
3178 9178 1.069022 CAAGTCCACCACAAAGATGCG 60.069 52.381 0.00 0.00 0.00 4.73
3179 9179 0.606401 AGTCCACCACAAAGATGCGG 60.606 55.000 0.00 0.00 34.79 5.69
3180 9180 1.971167 TCCACCACAAAGATGCGGC 60.971 57.895 0.00 0.00 31.60 6.53
3182 9182 3.737172 ACCACAAAGATGCGGCGC 61.737 61.111 27.44 27.44 31.60 6.53
3195 9195 2.185867 GGCGCCACGTCATCCTTA 59.814 61.111 24.80 0.00 0.00 2.69
3206 9206 5.440685 CACGTCATCCTTACTTGAACAAAC 58.559 41.667 0.00 0.00 0.00 2.93
3237 9237 9.656040 TTTCAAATTCATCAATGACCATAAAGG 57.344 29.630 0.00 0.00 45.67 3.11
3258 9258 2.568623 AGACGCCTTGTTGGAGAAAT 57.431 45.000 0.00 0.00 39.07 2.17
3260 9260 2.151202 GACGCCTTGTTGGAGAAATGA 58.849 47.619 0.00 0.00 39.07 2.57
3261 9261 2.749621 GACGCCTTGTTGGAGAAATGAT 59.250 45.455 0.00 0.00 39.07 2.45
3264 9264 3.674138 CGCCTTGTTGGAGAAATGATTGG 60.674 47.826 0.00 0.00 37.90 3.16
3267 9267 4.768968 CCTTGTTGGAGAAATGATTGGAGT 59.231 41.667 0.00 0.00 38.35 3.85
3268 9268 5.244626 CCTTGTTGGAGAAATGATTGGAGTT 59.755 40.000 0.00 0.00 38.35 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.105134 TCACCAGCTTTCCTTCGGTTTA 59.895 45.455 0.00 0.00 0.00 2.01
1 2 1.133915 TCACCAGCTTTCCTTCGGTTT 60.134 47.619 0.00 0.00 0.00 3.27
2 3 0.472471 TCACCAGCTTTCCTTCGGTT 59.528 50.000 0.00 0.00 0.00 4.44
3 4 0.472471 TTCACCAGCTTTCCTTCGGT 59.528 50.000 0.00 0.00 0.00 4.69
4 5 1.604604 TTTCACCAGCTTTCCTTCGG 58.395 50.000 0.00 0.00 0.00 4.30
5 6 2.287608 GGTTTTCACCAGCTTTCCTTCG 60.288 50.000 0.00 0.00 43.61 3.79
6 7 3.371102 GGTTTTCACCAGCTTTCCTTC 57.629 47.619 0.00 0.00 43.61 3.46
17 18 7.428282 TTTGTTTCTTTCTTTGGTTTTCACC 57.572 32.000 0.00 0.00 44.56 4.02
40 41 5.394224 TCCTTGTGTTTTTCTCCGTTTTT 57.606 34.783 0.00 0.00 0.00 1.94
41 42 5.394224 TTCCTTGTGTTTTTCTCCGTTTT 57.606 34.783 0.00 0.00 0.00 2.43
42 43 5.394224 TTTCCTTGTGTTTTTCTCCGTTT 57.606 34.783 0.00 0.00 0.00 3.60
43 44 5.047590 AGTTTTCCTTGTGTTTTTCTCCGTT 60.048 36.000 0.00 0.00 0.00 4.44
44 45 4.461431 AGTTTTCCTTGTGTTTTTCTCCGT 59.539 37.500 0.00 0.00 0.00 4.69
45 46 4.798387 CAGTTTTCCTTGTGTTTTTCTCCG 59.202 41.667 0.00 0.00 0.00 4.63
46 47 5.961272 TCAGTTTTCCTTGTGTTTTTCTCC 58.039 37.500 0.00 0.00 0.00 3.71
47 48 6.036470 CCTCAGTTTTCCTTGTGTTTTTCTC 58.964 40.000 0.00 0.00 0.00 2.87
48 49 5.714806 TCCTCAGTTTTCCTTGTGTTTTTCT 59.285 36.000 0.00 0.00 0.00 2.52
49 50 5.961272 TCCTCAGTTTTCCTTGTGTTTTTC 58.039 37.500 0.00 0.00 0.00 2.29
50 51 5.993748 TCCTCAGTTTTCCTTGTGTTTTT 57.006 34.783 0.00 0.00 0.00 1.94
51 52 5.993748 TTCCTCAGTTTTCCTTGTGTTTT 57.006 34.783 0.00 0.00 0.00 2.43
52 53 5.993748 TTTCCTCAGTTTTCCTTGTGTTT 57.006 34.783 0.00 0.00 0.00 2.83
53 54 5.993748 TTTTCCTCAGTTTTCCTTGTGTT 57.006 34.783 0.00 0.00 0.00 3.32
54 55 5.993748 TTTTTCCTCAGTTTTCCTTGTGT 57.006 34.783 0.00 0.00 0.00 3.72
55 56 6.572519 TCATTTTTCCTCAGTTTTCCTTGTG 58.427 36.000 0.00 0.00 0.00 3.33
56 57 6.790232 TCATTTTTCCTCAGTTTTCCTTGT 57.210 33.333 0.00 0.00 0.00 3.16
57 58 8.491331 TTTTCATTTTTCCTCAGTTTTCCTTG 57.509 30.769 0.00 0.00 0.00 3.61
58 59 8.539544 TCTTTTCATTTTTCCTCAGTTTTCCTT 58.460 29.630 0.00 0.00 0.00 3.36
59 60 8.078060 TCTTTTCATTTTTCCTCAGTTTTCCT 57.922 30.769 0.00 0.00 0.00 3.36
60 61 8.716646 TTCTTTTCATTTTTCCTCAGTTTTCC 57.283 30.769 0.00 0.00 0.00 3.13
64 65 9.166173 CCTTTTTCTTTTCATTTTTCCTCAGTT 57.834 29.630 0.00 0.00 0.00 3.16
65 66 7.770433 CCCTTTTTCTTTTCATTTTTCCTCAGT 59.230 33.333 0.00 0.00 0.00 3.41
66 67 7.986889 TCCCTTTTTCTTTTCATTTTTCCTCAG 59.013 33.333 0.00 0.00 0.00 3.35
67 68 7.856415 TCCCTTTTTCTTTTCATTTTTCCTCA 58.144 30.769 0.00 0.00 0.00 3.86
68 69 8.731275 TTCCCTTTTTCTTTTCATTTTTCCTC 57.269 30.769 0.00 0.00 0.00 3.71
69 70 9.527157 TTTTCCCTTTTTCTTTTCATTTTTCCT 57.473 25.926 0.00 0.00 0.00 3.36
93 94 4.432980 TCCTTCGGTTCTCTTCCTTTTT 57.567 40.909 0.00 0.00 0.00 1.94
94 95 4.432980 TTCCTTCGGTTCTCTTCCTTTT 57.567 40.909 0.00 0.00 0.00 2.27
95 96 4.432980 TTTCCTTCGGTTCTCTTCCTTT 57.567 40.909 0.00 0.00 0.00 3.11
96 97 4.135306 GTTTTCCTTCGGTTCTCTTCCTT 58.865 43.478 0.00 0.00 0.00 3.36
97 98 3.135895 TGTTTTCCTTCGGTTCTCTTCCT 59.864 43.478 0.00 0.00 0.00 3.36
98 99 3.473625 TGTTTTCCTTCGGTTCTCTTCC 58.526 45.455 0.00 0.00 0.00 3.46
99 100 5.494632 TTTGTTTTCCTTCGGTTCTCTTC 57.505 39.130 0.00 0.00 0.00 2.87
100 101 5.907866 TTTTGTTTTCCTTCGGTTCTCTT 57.092 34.783 0.00 0.00 0.00 2.85
101 102 5.592688 TCATTTTGTTTTCCTTCGGTTCTCT 59.407 36.000 0.00 0.00 0.00 3.10
102 103 5.827666 TCATTTTGTTTTCCTTCGGTTCTC 58.172 37.500 0.00 0.00 0.00 2.87
103 104 5.845391 TCATTTTGTTTTCCTTCGGTTCT 57.155 34.783 0.00 0.00 0.00 3.01
104 105 6.311690 TGTTTCATTTTGTTTTCCTTCGGTTC 59.688 34.615 0.00 0.00 0.00 3.62
105 106 6.166982 TGTTTCATTTTGTTTTCCTTCGGTT 58.833 32.000 0.00 0.00 0.00 4.44
106 107 5.725362 TGTTTCATTTTGTTTTCCTTCGGT 58.275 33.333 0.00 0.00 0.00 4.69
107 108 6.654793 TTGTTTCATTTTGTTTTCCTTCGG 57.345 33.333 0.00 0.00 0.00 4.30
108 109 8.941127 TTTTTGTTTCATTTTGTTTTCCTTCG 57.059 26.923 0.00 0.00 0.00 3.79
134 135 8.673711 GGTTTTCTTTGGTTTCTTTGCTTTTAT 58.326 29.630 0.00 0.00 0.00 1.40
135 136 7.661847 TGGTTTTCTTTGGTTTCTTTGCTTTTA 59.338 29.630 0.00 0.00 0.00 1.52
136 137 6.488344 TGGTTTTCTTTGGTTTCTTTGCTTTT 59.512 30.769 0.00 0.00 0.00 2.27
137 138 6.000840 TGGTTTTCTTTGGTTTCTTTGCTTT 58.999 32.000 0.00 0.00 0.00 3.51
138 139 5.555966 TGGTTTTCTTTGGTTTCTTTGCTT 58.444 33.333 0.00 0.00 0.00 3.91
139 140 5.159273 TGGTTTTCTTTGGTTTCTTTGCT 57.841 34.783 0.00 0.00 0.00 3.91
140 141 5.730289 GCATGGTTTTCTTTGGTTTCTTTGC 60.730 40.000 0.00 0.00 0.00 3.68
141 142 5.353678 TGCATGGTTTTCTTTGGTTTCTTTG 59.646 36.000 0.00 0.00 0.00 2.77
142 143 5.495640 TGCATGGTTTTCTTTGGTTTCTTT 58.504 33.333 0.00 0.00 0.00 2.52
143 144 5.096443 TGCATGGTTTTCTTTGGTTTCTT 57.904 34.783 0.00 0.00 0.00 2.52
144 145 4.751767 TGCATGGTTTTCTTTGGTTTCT 57.248 36.364 0.00 0.00 0.00 2.52
145 146 5.809719 TTTGCATGGTTTTCTTTGGTTTC 57.190 34.783 0.00 0.00 0.00 2.78
146 147 5.474876 TGTTTTGCATGGTTTTCTTTGGTTT 59.525 32.000 0.00 0.00 0.00 3.27
147 148 5.006386 TGTTTTGCATGGTTTTCTTTGGTT 58.994 33.333 0.00 0.00 0.00 3.67
148 149 4.583871 TGTTTTGCATGGTTTTCTTTGGT 58.416 34.783 0.00 0.00 0.00 3.67
149 150 4.635324 ACTGTTTTGCATGGTTTTCTTTGG 59.365 37.500 0.00 0.00 0.00 3.28
150 151 5.447548 CCACTGTTTTGCATGGTTTTCTTTG 60.448 40.000 0.00 0.00 0.00 2.77
151 152 4.635324 CCACTGTTTTGCATGGTTTTCTTT 59.365 37.500 0.00 0.00 0.00 2.52
152 153 4.081198 TCCACTGTTTTGCATGGTTTTCTT 60.081 37.500 1.86 0.00 33.67 2.52
153 154 3.450457 TCCACTGTTTTGCATGGTTTTCT 59.550 39.130 1.86 0.00 33.67 2.52
154 155 3.791245 TCCACTGTTTTGCATGGTTTTC 58.209 40.909 1.86 0.00 33.67 2.29
155 156 3.902881 TCCACTGTTTTGCATGGTTTT 57.097 38.095 1.86 0.00 33.67 2.43
156 157 3.530535 GTTCCACTGTTTTGCATGGTTT 58.469 40.909 1.86 0.00 33.67 3.27
157 158 2.158971 GGTTCCACTGTTTTGCATGGTT 60.159 45.455 1.86 0.00 33.67 3.67
158 159 1.412343 GGTTCCACTGTTTTGCATGGT 59.588 47.619 1.86 0.00 33.67 3.55
159 160 1.602668 CGGTTCCACTGTTTTGCATGG 60.603 52.381 0.00 0.00 0.00 3.66
160 161 1.336440 TCGGTTCCACTGTTTTGCATG 59.664 47.619 0.00 0.00 0.00 4.06
161 162 1.686355 TCGGTTCCACTGTTTTGCAT 58.314 45.000 0.00 0.00 0.00 3.96
162 163 1.464734 TTCGGTTCCACTGTTTTGCA 58.535 45.000 0.00 0.00 0.00 4.08
163 164 2.570442 TTTCGGTTCCACTGTTTTGC 57.430 45.000 0.00 0.00 0.00 3.68
164 165 5.220567 CCAATTTTTCGGTTCCACTGTTTTG 60.221 40.000 0.00 0.00 0.00 2.44
165 166 4.873259 CCAATTTTTCGGTTCCACTGTTTT 59.127 37.500 0.00 0.00 0.00 2.43
166 167 4.081365 ACCAATTTTTCGGTTCCACTGTTT 60.081 37.500 0.00 0.00 28.43 2.83
167 168 3.449377 ACCAATTTTTCGGTTCCACTGTT 59.551 39.130 0.00 0.00 28.43 3.16
168 169 3.028130 ACCAATTTTTCGGTTCCACTGT 58.972 40.909 0.00 0.00 28.43 3.55
169 170 3.380142 CACCAATTTTTCGGTTCCACTG 58.620 45.455 0.00 0.00 31.41 3.66
170 171 2.223947 GCACCAATTTTTCGGTTCCACT 60.224 45.455 0.00 0.00 31.41 4.00
171 172 2.131972 GCACCAATTTTTCGGTTCCAC 58.868 47.619 0.00 0.00 31.41 4.02
172 173 2.035632 AGCACCAATTTTTCGGTTCCA 58.964 42.857 0.00 0.00 31.41 3.53
173 174 2.403259 CAGCACCAATTTTTCGGTTCC 58.597 47.619 0.00 0.00 31.41 3.62
174 175 1.792367 GCAGCACCAATTTTTCGGTTC 59.208 47.619 0.00 0.00 31.41 3.62
175 176 1.137872 TGCAGCACCAATTTTTCGGTT 59.862 42.857 0.00 0.00 31.41 4.44
176 177 0.749649 TGCAGCACCAATTTTTCGGT 59.250 45.000 0.00 0.00 35.27 4.69
177 178 1.269726 ACTGCAGCACCAATTTTTCGG 60.270 47.619 15.27 0.00 0.00 4.30
178 179 2.138596 ACTGCAGCACCAATTTTTCG 57.861 45.000 15.27 0.00 0.00 3.46
179 180 4.448732 CCTTTACTGCAGCACCAATTTTTC 59.551 41.667 15.27 0.00 0.00 2.29
180 181 4.379652 CCTTTACTGCAGCACCAATTTTT 58.620 39.130 15.27 0.00 0.00 1.94
181 182 3.244181 CCCTTTACTGCAGCACCAATTTT 60.244 43.478 15.27 0.00 0.00 1.82
182 183 2.299867 CCCTTTACTGCAGCACCAATTT 59.700 45.455 15.27 0.00 0.00 1.82
183 184 1.895131 CCCTTTACTGCAGCACCAATT 59.105 47.619 15.27 0.00 0.00 2.32
184 185 1.203050 ACCCTTTACTGCAGCACCAAT 60.203 47.619 15.27 0.00 0.00 3.16
185 186 0.184933 ACCCTTTACTGCAGCACCAA 59.815 50.000 15.27 0.00 0.00 3.67
186 187 0.250727 GACCCTTTACTGCAGCACCA 60.251 55.000 15.27 0.00 0.00 4.17
187 188 1.298859 CGACCCTTTACTGCAGCACC 61.299 60.000 15.27 0.00 0.00 5.01
188 189 1.298859 CCGACCCTTTACTGCAGCAC 61.299 60.000 15.27 0.00 0.00 4.40
189 190 1.003839 CCGACCCTTTACTGCAGCA 60.004 57.895 15.27 0.00 0.00 4.41
190 191 2.399356 GCCGACCCTTTACTGCAGC 61.399 63.158 15.27 0.00 0.00 5.25
191 192 1.745489 GGCCGACCCTTTACTGCAG 60.745 63.158 13.48 13.48 0.00 4.41
192 193 2.349755 GGCCGACCCTTTACTGCA 59.650 61.111 0.00 0.00 0.00 4.41
202 203 1.523938 GCACTCTAATGGGCCGACC 60.524 63.158 0.00 0.00 40.81 4.79
203 204 1.523938 GGCACTCTAATGGGCCGAC 60.524 63.158 0.00 0.00 36.58 4.79
204 205 2.908015 GGCACTCTAATGGGCCGA 59.092 61.111 0.00 0.00 36.58 5.54
206 207 2.203209 CGGGCACTCTAATGGGCC 60.203 66.667 0.00 0.00 45.67 5.80
207 208 2.902343 GCGGGCACTCTAATGGGC 60.902 66.667 0.00 0.00 0.00 5.36
208 209 2.203209 GGCGGGCACTCTAATGGG 60.203 66.667 0.00 0.00 0.00 4.00
209 210 0.396435 TATGGCGGGCACTCTAATGG 59.604 55.000 6.33 0.00 0.00 3.16
210 211 1.609061 CCTATGGCGGGCACTCTAATG 60.609 57.143 6.33 0.00 0.00 1.90
211 212 0.687354 CCTATGGCGGGCACTCTAAT 59.313 55.000 6.33 0.00 0.00 1.73
212 213 2.133195 CCTATGGCGGGCACTCTAA 58.867 57.895 6.33 0.00 0.00 2.10
213 214 3.870955 CCTATGGCGGGCACTCTA 58.129 61.111 6.33 0.00 0.00 2.43
223 224 1.591863 GTTCCGTCTCGCCTATGGC 60.592 63.158 0.00 0.00 46.75 4.40
224 225 0.030908 GAGTTCCGTCTCGCCTATGG 59.969 60.000 0.00 0.00 0.00 2.74
225 226 1.025812 AGAGTTCCGTCTCGCCTATG 58.974 55.000 0.00 0.00 39.21 2.23
226 227 1.025812 CAGAGTTCCGTCTCGCCTAT 58.974 55.000 0.00 0.00 39.21 2.57
227 228 1.654954 GCAGAGTTCCGTCTCGCCTA 61.655 60.000 0.00 0.00 39.21 3.93
228 229 2.995872 GCAGAGTTCCGTCTCGCCT 61.996 63.158 0.00 0.00 39.21 5.52
229 230 2.507324 GCAGAGTTCCGTCTCGCC 60.507 66.667 0.00 0.00 39.21 5.54
230 231 1.515304 GAGCAGAGTTCCGTCTCGC 60.515 63.158 0.00 0.00 39.21 5.03
231 232 1.226156 CGAGCAGAGTTCCGTCTCG 60.226 63.158 0.00 0.00 40.22 4.04
232 233 1.515304 GCGAGCAGAGTTCCGTCTC 60.515 63.158 0.00 0.00 34.96 3.36
233 234 1.806461 TTGCGAGCAGAGTTCCGTCT 61.806 55.000 0.00 0.00 0.00 4.18
234 235 0.737715 ATTGCGAGCAGAGTTCCGTC 60.738 55.000 0.00 0.00 0.00 4.79
235 236 1.016130 CATTGCGAGCAGAGTTCCGT 61.016 55.000 0.00 0.00 0.00 4.69
236 237 1.699656 CCATTGCGAGCAGAGTTCCG 61.700 60.000 0.00 0.00 0.00 4.30
237 238 1.372087 CCCATTGCGAGCAGAGTTCC 61.372 60.000 0.00 0.00 0.00 3.62
238 239 0.674895 ACCCATTGCGAGCAGAGTTC 60.675 55.000 0.00 0.00 0.00 3.01
239 240 0.957395 CACCCATTGCGAGCAGAGTT 60.957 55.000 0.00 0.00 0.00 3.01
240 241 1.376424 CACCCATTGCGAGCAGAGT 60.376 57.895 0.00 0.00 0.00 3.24
241 242 0.463295 ATCACCCATTGCGAGCAGAG 60.463 55.000 0.00 0.00 0.00 3.35
242 243 0.829990 TATCACCCATTGCGAGCAGA 59.170 50.000 0.00 0.00 0.00 4.26
243 244 1.888215 ATATCACCCATTGCGAGCAG 58.112 50.000 0.00 0.00 0.00 4.24
244 245 3.701205 ATATATCACCCATTGCGAGCA 57.299 42.857 0.00 0.00 0.00 4.26
245 246 5.178797 AGTTATATATCACCCATTGCGAGC 58.821 41.667 0.00 0.00 0.00 5.03
246 247 6.533012 CAGAGTTATATATCACCCATTGCGAG 59.467 42.308 0.00 0.00 0.00 5.03
247 248 6.398095 CAGAGTTATATATCACCCATTGCGA 58.602 40.000 0.00 0.00 0.00 5.10
248 249 5.582269 CCAGAGTTATATATCACCCATTGCG 59.418 44.000 0.00 0.00 0.00 4.85
249 250 5.355350 GCCAGAGTTATATATCACCCATTGC 59.645 44.000 0.00 0.00 0.00 3.56
250 251 6.475504 TGCCAGAGTTATATATCACCCATTG 58.524 40.000 0.00 0.00 0.00 2.82
251 252 6.702449 TGCCAGAGTTATATATCACCCATT 57.298 37.500 0.00 0.00 0.00 3.16
252 253 6.702449 TTGCCAGAGTTATATATCACCCAT 57.298 37.500 0.00 0.00 0.00 4.00
253 254 6.328934 TCTTTGCCAGAGTTATATATCACCCA 59.671 38.462 0.00 0.00 0.00 4.51
254 255 6.769512 TCTTTGCCAGAGTTATATATCACCC 58.230 40.000 0.00 0.00 0.00 4.61
262 263 9.330063 CACTTCAATATCTTTGCCAGAGTTATA 57.670 33.333 0.00 0.00 33.87 0.98
263 264 7.831193 ACACTTCAATATCTTTGCCAGAGTTAT 59.169 33.333 0.00 0.00 33.87 1.89
264 265 7.168219 ACACTTCAATATCTTTGCCAGAGTTA 58.832 34.615 0.00 0.00 33.87 2.24
265 266 6.006449 ACACTTCAATATCTTTGCCAGAGTT 58.994 36.000 0.00 0.00 33.87 3.01
266 267 5.564550 ACACTTCAATATCTTTGCCAGAGT 58.435 37.500 0.00 0.00 33.87 3.24
267 268 5.065731 GGACACTTCAATATCTTTGCCAGAG 59.934 44.000 0.00 0.00 33.87 3.35
268 269 4.943705 GGACACTTCAATATCTTTGCCAGA 59.056 41.667 0.00 0.00 35.33 3.86
269 270 4.701651 TGGACACTTCAATATCTTTGCCAG 59.298 41.667 0.00 0.00 0.00 4.85
270 271 4.458989 GTGGACACTTCAATATCTTTGCCA 59.541 41.667 0.00 0.00 0.00 4.92
271 272 4.458989 TGTGGACACTTCAATATCTTTGCC 59.541 41.667 3.91 0.00 0.00 4.52
272 273 5.048782 TGTGTGGACACTTCAATATCTTTGC 60.049 40.000 11.09 0.00 46.55 3.68
273 274 6.558771 TGTGTGGACACTTCAATATCTTTG 57.441 37.500 11.09 0.00 46.55 2.77
274 275 6.772716 AGTTGTGTGGACACTTCAATATCTTT 59.227 34.615 11.09 0.00 46.55 2.52
275 276 6.299141 AGTTGTGTGGACACTTCAATATCTT 58.701 36.000 11.09 0.00 46.55 2.40
276 277 5.869579 AGTTGTGTGGACACTTCAATATCT 58.130 37.500 11.09 3.17 46.55 1.98
277 278 6.560253 AAGTTGTGTGGACACTTCAATATC 57.440 37.500 11.09 1.38 46.55 1.63
278 279 6.959639 AAAGTTGTGTGGACACTTCAATAT 57.040 33.333 11.09 2.86 46.55 1.28
279 280 6.559810 CAAAAGTTGTGTGGACACTTCAATA 58.440 36.000 11.09 0.00 46.55 1.90
280 281 5.410067 CAAAAGTTGTGTGGACACTTCAAT 58.590 37.500 11.09 0.00 46.55 2.57
281 282 4.804108 CAAAAGTTGTGTGGACACTTCAA 58.196 39.130 11.09 7.86 46.55 2.69
282 283 3.366883 GCAAAAGTTGTGTGGACACTTCA 60.367 43.478 11.09 2.61 46.55 3.02
283 284 3.179048 GCAAAAGTTGTGTGGACACTTC 58.821 45.455 11.09 4.58 46.55 3.01
284 285 2.415357 CGCAAAAGTTGTGTGGACACTT 60.415 45.455 11.09 0.00 46.55 3.16
285 286 1.132262 CGCAAAAGTTGTGTGGACACT 59.868 47.619 11.09 0.00 46.55 3.55
286 287 1.544686 CGCAAAAGTTGTGTGGACAC 58.455 50.000 2.81 2.81 46.59 3.67
293 294 4.031652 CCAGAAAAAGACGCAAAAGTTGTG 59.968 41.667 0.14 0.14 46.24 3.33
294 295 4.082463 TCCAGAAAAAGACGCAAAAGTTGT 60.082 37.500 0.00 0.00 0.00 3.32
295 296 4.420168 TCCAGAAAAAGACGCAAAAGTTG 58.580 39.130 0.00 0.00 0.00 3.16
296 297 4.712122 TCCAGAAAAAGACGCAAAAGTT 57.288 36.364 0.00 0.00 0.00 2.66
297 298 4.712122 TTCCAGAAAAAGACGCAAAAGT 57.288 36.364 0.00 0.00 0.00 2.66
298 299 5.339611 CGTATTCCAGAAAAAGACGCAAAAG 59.660 40.000 0.00 0.00 0.00 2.27
299 300 5.209240 CGTATTCCAGAAAAAGACGCAAAA 58.791 37.500 0.00 0.00 0.00 2.44
300 301 4.778904 CGTATTCCAGAAAAAGACGCAAA 58.221 39.130 0.00 0.00 0.00 3.68
301 302 4.398549 CGTATTCCAGAAAAAGACGCAA 57.601 40.909 0.00 0.00 0.00 4.85
303 304 2.770532 GCGTATTCCAGAAAAAGACGC 58.229 47.619 11.43 11.43 45.92 5.19
304 305 4.398549 TTGCGTATTCCAGAAAAAGACG 57.601 40.909 0.00 0.00 0.00 4.18
329 330 7.648510 AGAGAAACGTTTACTAAGTGAAGACTG 59.351 37.037 14.65 0.00 30.61 3.51
406 407 4.278419 AGGGAGTGCTAATTTGTTGTTGAC 59.722 41.667 0.00 0.00 0.00 3.18
450 451 9.581099 AAATAAGTGTTGTGGTTTTAGTTCAAG 57.419 29.630 0.00 0.00 0.00 3.02
451 452 9.930693 AAAATAAGTGTTGTGGTTTTAGTTCAA 57.069 25.926 0.00 0.00 0.00 2.69
466 714 6.774170 ACTCCCTCCGTTTTAAAATAAGTGTT 59.226 34.615 3.52 0.00 0.00 3.32
512 761 2.033151 GGCGCACCAACGAATATAGAAC 60.033 50.000 10.83 0.00 35.26 3.01
517 766 4.627788 TGGCGCACCAACGAATAT 57.372 50.000 10.83 0.00 45.37 1.28
528 777 6.037281 TCGTCATTTTAAGTATTTATGGCGCA 59.963 34.615 10.83 0.00 35.89 6.09
558 1286 1.620822 ATGGTGGGTTTTGAGTGAGC 58.379 50.000 0.00 0.00 0.00 4.26
561 1289 7.461182 TCTATAAAATGGTGGGTTTTGAGTG 57.539 36.000 0.00 0.00 31.71 3.51
698 1452 1.133025 ACGCTTACATTACGTACGGCT 59.867 47.619 21.06 1.34 38.45 5.52
756 1510 2.046023 CAGCCCTCGCATGGTGAA 60.046 61.111 0.00 0.00 37.52 3.18
764 3575 1.672356 ACAATGACACAGCCCTCGC 60.672 57.895 0.00 0.00 0.00 5.03
840 3655 7.813627 GCTAATTAGGATCCTACGAAGGTTTAG 59.186 40.741 21.57 17.08 44.09 1.85
841 5311 7.508296 AGCTAATTAGGATCCTACGAAGGTTTA 59.492 37.037 21.57 3.69 44.09 2.01
842 5312 6.326843 AGCTAATTAGGATCCTACGAAGGTTT 59.673 38.462 21.57 8.77 44.09 3.27
884 5361 3.312697 GCTTGCTAATTAGGTTTCCTCCG 59.687 47.826 14.28 0.00 34.61 4.63
885 5362 4.096532 GTGCTTGCTAATTAGGTTTCCTCC 59.903 45.833 14.28 0.00 34.61 4.30
886 5363 4.201822 CGTGCTTGCTAATTAGGTTTCCTC 60.202 45.833 14.28 0.00 34.61 3.71
889 5366 4.392138 ACTCGTGCTTGCTAATTAGGTTTC 59.608 41.667 14.28 0.00 0.00 2.78
901 5402 2.171940 CGCTCAACTCGTGCTTGC 59.828 61.111 0.00 0.00 31.76 4.01
958 5486 8.553696 CCGTATGCGTGTATGTATATATAGACA 58.446 37.037 12.35 12.35 36.15 3.41
1007 5535 2.954989 GGAGGGAGAGATTGATTTTGCC 59.045 50.000 0.00 0.00 0.00 4.52
1079 5632 2.497770 CGGTCGACCACCCCATAC 59.502 66.667 32.80 4.00 43.31 2.39
1248 5834 1.006805 CATCGCCACGATCTCTCCC 60.007 63.158 0.00 0.00 45.19 4.30
1272 5858 4.421479 AAGTCGCTCGCACGGAGG 62.421 66.667 0.00 0.00 43.36 4.30
1872 6489 1.100463 TGTTGCGCAGAAAGCTTCCA 61.100 50.000 11.31 0.00 42.61 3.53
1926 6543 2.434185 TCTGACAATGTCGGCGGC 60.434 61.111 16.93 3.62 38.67 6.53
1959 6576 2.876091 CATCGTAGAAGACCGCTCAAA 58.124 47.619 0.00 0.00 43.58 2.69
2077 6694 6.093219 ACAAGTCAGATGCATTGTAGATTGTC 59.907 38.462 0.00 0.00 34.26 3.18
2139 6762 4.101585 TCACACCTCATCCATACTCATTCC 59.898 45.833 0.00 0.00 0.00 3.01
2195 6826 1.942677 CCTTACAACGTGTGTGGTGA 58.057 50.000 11.90 0.00 41.89 4.02
2206 6837 5.841957 AATGGATCAATCAGCCTTACAAC 57.158 39.130 0.00 0.00 0.00 3.32
2401 8261 9.798885 GTAAACTAGTTGTACTACCGTATATCG 57.201 37.037 9.34 0.00 39.52 2.92
2409 8269 7.147846 TGGGCATAGTAAACTAGTTGTACTACC 60.148 40.741 24.37 22.05 34.14 3.18
2440 8300 3.461061 TGGCAATGCGTCAAATTTTGAA 58.539 36.364 13.21 0.00 42.15 2.69
2445 8305 1.549620 TCCATGGCAATGCGTCAAATT 59.450 42.857 6.96 0.00 31.93 1.82
2455 8315 6.360370 AGTCGTATACTTATCCATGGCAAT 57.640 37.500 6.96 0.00 33.35 3.56
2470 8330 2.488937 TCTCGGTGTGCAAAGTCGTATA 59.511 45.455 0.00 0.00 0.00 1.47
2513 8488 8.034804 CAGGATATTCATGGTCGACATAATGTA 58.965 37.037 18.91 11.59 37.84 2.29
2522 8497 8.595362 ACTAATATCAGGATATTCATGGTCGA 57.405 34.615 15.74 0.00 41.60 4.20
2585 8560 7.609146 TCGTCGTCCCACTCTATATAATTATGT 59.391 37.037 8.28 4.08 0.00 2.29
2586 8561 7.909121 GTCGTCGTCCCACTCTATATAATTATG 59.091 40.741 8.28 0.00 0.00 1.90
2587 8562 7.609146 TGTCGTCGTCCCACTCTATATAATTAT 59.391 37.037 2.97 2.97 0.00 1.28
2588 8563 6.936335 TGTCGTCGTCCCACTCTATATAATTA 59.064 38.462 0.00 0.00 0.00 1.40
2589 8564 5.766670 TGTCGTCGTCCCACTCTATATAATT 59.233 40.000 0.00 0.00 0.00 1.40
2590 8565 5.311265 TGTCGTCGTCCCACTCTATATAAT 58.689 41.667 0.00 0.00 0.00 1.28
2591 8566 4.707105 TGTCGTCGTCCCACTCTATATAA 58.293 43.478 0.00 0.00 0.00 0.98
2592 8567 4.341366 TGTCGTCGTCCCACTCTATATA 57.659 45.455 0.00 0.00 0.00 0.86
2593 8568 3.204306 TGTCGTCGTCCCACTCTATAT 57.796 47.619 0.00 0.00 0.00 0.86
2594 8569 2.696989 TGTCGTCGTCCCACTCTATA 57.303 50.000 0.00 0.00 0.00 1.31
2595 8570 1.830279 TTGTCGTCGTCCCACTCTAT 58.170 50.000 0.00 0.00 0.00 1.98
2596 8571 1.471287 CATTGTCGTCGTCCCACTCTA 59.529 52.381 0.00 0.00 0.00 2.43
2597 8572 0.243907 CATTGTCGTCGTCCCACTCT 59.756 55.000 0.00 0.00 0.00 3.24
2598 8573 0.242825 TCATTGTCGTCGTCCCACTC 59.757 55.000 0.00 0.00 0.00 3.51
2599 8574 0.895530 ATCATTGTCGTCGTCCCACT 59.104 50.000 0.00 0.00 0.00 4.00
2600 8575 1.393539 CAATCATTGTCGTCGTCCCAC 59.606 52.381 0.00 0.00 0.00 4.61
2601 8576 1.001520 ACAATCATTGTCGTCGTCCCA 59.998 47.619 0.00 0.00 40.56 4.37
2602 8577 1.393539 CACAATCATTGTCGTCGTCCC 59.606 52.381 0.00 0.00 43.23 4.46
2603 8578 2.333926 TCACAATCATTGTCGTCGTCC 58.666 47.619 0.00 0.00 43.23 4.79
2604 8579 4.091365 TCATTCACAATCATTGTCGTCGTC 59.909 41.667 0.00 0.00 43.23 4.20
2605 8580 3.993736 TCATTCACAATCATTGTCGTCGT 59.006 39.130 0.00 0.00 43.23 4.34
2606 8581 4.327087 TCTCATTCACAATCATTGTCGTCG 59.673 41.667 0.00 0.00 43.23 5.12
2607 8582 5.120674 TGTCTCATTCACAATCATTGTCGTC 59.879 40.000 0.00 0.00 43.23 4.20
2608 8583 4.996758 TGTCTCATTCACAATCATTGTCGT 59.003 37.500 0.00 0.00 43.23 4.34
2609 8584 5.535043 TGTCTCATTCACAATCATTGTCG 57.465 39.130 0.00 0.00 43.23 4.35
2614 8589 9.803507 ACCATATATTGTCTCATTCACAATCAT 57.196 29.630 1.40 0.00 42.33 2.45
2615 8590 9.631257 AACCATATATTGTCTCATTCACAATCA 57.369 29.630 1.40 0.00 42.33 2.57
2618 8593 9.898152 TGTAACCATATATTGTCTCATTCACAA 57.102 29.630 0.00 0.00 38.12 3.33
2629 8604 9.431887 GGTCGACATAATGTAACCATATATTGT 57.568 33.333 18.91 0.00 36.69 2.71
2630 8605 9.430623 TGGTCGACATAATGTAACCATATATTG 57.569 33.333 18.91 0.00 39.74 1.90
2632 8607 9.599866 CATGGTCGACATAATGTAACCATATAT 57.400 33.333 18.91 0.00 46.58 0.86
2633 8608 8.808092 TCATGGTCGACATAATGTAACCATATA 58.192 33.333 18.91 8.57 46.58 0.86
2634 8609 7.676004 TCATGGTCGACATAATGTAACCATAT 58.324 34.615 18.91 0.14 46.58 1.78
2635 8610 7.056844 TCATGGTCGACATAATGTAACCATA 57.943 36.000 18.91 6.89 46.58 2.74
2637 8612 5.346181 TCATGGTCGACATAATGTAACCA 57.654 39.130 18.91 9.73 44.90 3.67
2638 8613 6.861065 ATTCATGGTCGACATAATGTAACC 57.139 37.500 18.91 0.00 37.84 2.85
2639 8614 8.656849 GGATATTCATGGTCGACATAATGTAAC 58.343 37.037 18.91 6.28 37.84 2.50
2640 8615 8.593679 AGGATATTCATGGTCGACATAATGTAA 58.406 33.333 18.91 12.88 37.84 2.41
2641 8616 8.034804 CAGGATATTCATGGTCGACATAATGTA 58.965 37.037 18.91 11.59 37.84 2.29
2642 8617 6.875726 CAGGATATTCATGGTCGACATAATGT 59.124 38.462 18.91 8.80 37.84 2.71
2643 8618 7.099120 TCAGGATATTCATGGTCGACATAATG 58.901 38.462 18.91 16.71 37.84 1.90
2644 8619 7.244886 TCAGGATATTCATGGTCGACATAAT 57.755 36.000 18.91 12.46 37.84 1.28
2645 8620 6.664428 TCAGGATATTCATGGTCGACATAA 57.336 37.500 18.91 5.76 37.84 1.90
2646 8621 6.857437 ATCAGGATATTCATGGTCGACATA 57.143 37.500 18.91 6.45 37.84 2.29
2647 8622 5.752036 ATCAGGATATTCATGGTCGACAT 57.248 39.130 18.91 6.28 41.57 3.06
2648 8623 6.857437 ATATCAGGATATTCATGGTCGACA 57.143 37.500 18.91 3.91 30.18 4.35
2649 8624 8.470805 ACTAATATCAGGATATTCATGGTCGAC 58.529 37.037 15.74 7.13 41.60 4.20
2650 8625 8.595362 ACTAATATCAGGATATTCATGGTCGA 57.405 34.615 15.74 0.00 41.60 4.20
2651 8626 9.658799 AAACTAATATCAGGATATTCATGGTCG 57.341 33.333 15.74 3.41 41.60 4.79
2673 8648 9.636789 AAGTTAGACAATTAACCCTTACAAACT 57.363 29.630 0.00 0.00 34.75 2.66
2674 8649 9.673454 CAAGTTAGACAATTAACCCTTACAAAC 57.327 33.333 0.00 0.00 34.75 2.93
2675 8650 9.629878 TCAAGTTAGACAATTAACCCTTACAAA 57.370 29.630 0.00 0.00 34.75 2.83
2676 8651 9.629878 TTCAAGTTAGACAATTAACCCTTACAA 57.370 29.630 0.00 0.00 34.75 2.41
2677 8652 9.802039 ATTCAAGTTAGACAATTAACCCTTACA 57.198 29.630 0.00 0.00 34.75 2.41
2689 8664 9.168451 TGTGTGTTCTTAATTCAAGTTAGACAA 57.832 29.630 0.00 0.00 35.58 3.18
2690 8665 8.725405 TGTGTGTTCTTAATTCAAGTTAGACA 57.275 30.769 0.00 0.00 35.58 3.41
2706 8681 9.998106 GTCCCACTATATAATTATGTGTGTTCT 57.002 33.333 8.28 0.00 0.00 3.01
2707 8682 8.922676 CGTCCCACTATATAATTATGTGTGTTC 58.077 37.037 8.28 6.13 0.00 3.18
2708 8683 8.644216 TCGTCCCACTATATAATTATGTGTGTT 58.356 33.333 8.28 0.00 0.00 3.32
2709 8684 8.086522 GTCGTCCCACTATATAATTATGTGTGT 58.913 37.037 8.28 3.15 0.00 3.72
2710 8685 7.272731 CGTCGTCCCACTATATAATTATGTGTG 59.727 40.741 8.28 12.40 0.00 3.82
2711 8686 7.175467 TCGTCGTCCCACTATATAATTATGTGT 59.825 37.037 8.28 1.79 0.00 3.72
2712 8687 7.484007 GTCGTCGTCCCACTATATAATTATGTG 59.516 40.741 8.28 7.66 0.00 3.21
2713 8688 7.175467 TGTCGTCGTCCCACTATATAATTATGT 59.825 37.037 8.28 4.08 0.00 2.29
2714 8689 7.532571 TGTCGTCGTCCCACTATATAATTATG 58.467 38.462 8.28 0.00 0.00 1.90
2715 8690 7.692460 TGTCGTCGTCCCACTATATAATTAT 57.308 36.000 2.97 2.97 0.00 1.28
2716 8691 7.509141 TTGTCGTCGTCCCACTATATAATTA 57.491 36.000 0.00 0.00 0.00 1.40
2717 8692 6.395426 TTGTCGTCGTCCCACTATATAATT 57.605 37.500 0.00 0.00 0.00 1.40
2718 8693 6.585695 ATTGTCGTCGTCCCACTATATAAT 57.414 37.500 0.00 0.00 0.00 1.28
2719 8694 6.395426 AATTGTCGTCGTCCCACTATATAA 57.605 37.500 0.00 0.00 0.00 0.98
2720 8695 7.692460 ATAATTGTCGTCGTCCCACTATATA 57.308 36.000 0.00 0.00 0.00 0.86
2721 8696 4.931661 AATTGTCGTCGTCCCACTATAT 57.068 40.909 0.00 0.00 0.00 0.86
2722 8697 6.183360 ACAATAATTGTCGTCGTCCCACTATA 60.183 38.462 0.00 0.00 40.56 1.31
2723 8698 4.931661 ATAATTGTCGTCGTCCCACTAT 57.068 40.909 0.00 0.00 0.00 2.12
2724 8699 4.082081 ACAATAATTGTCGTCGTCCCACTA 60.082 41.667 0.00 0.00 40.56 2.74
2725 8700 3.259064 CAATAATTGTCGTCGTCCCACT 58.741 45.455 0.00 0.00 0.00 4.00
2726 8701 2.997986 ACAATAATTGTCGTCGTCCCAC 59.002 45.455 0.00 0.00 40.56 4.61
2727 8702 2.997303 CACAATAATTGTCGTCGTCCCA 59.003 45.455 0.00 0.00 43.23 4.37
2728 8703 2.222953 GCACAATAATTGTCGTCGTCCC 60.223 50.000 0.00 0.00 43.23 4.46
2729 8704 2.671396 AGCACAATAATTGTCGTCGTCC 59.329 45.455 0.00 0.00 43.23 4.79
2730 8705 3.122948 ACAGCACAATAATTGTCGTCGTC 59.877 43.478 0.00 0.00 43.23 4.20
2731 8706 3.064207 ACAGCACAATAATTGTCGTCGT 58.936 40.909 0.00 0.00 43.23 4.34
2732 8707 3.483574 GGACAGCACAATAATTGTCGTCG 60.484 47.826 0.00 0.00 43.23 5.12
2733 8708 3.684788 AGGACAGCACAATAATTGTCGTC 59.315 43.478 0.00 0.00 43.23 4.20
2734 8709 3.674997 AGGACAGCACAATAATTGTCGT 58.325 40.909 0.00 0.00 43.23 4.34
2735 8710 4.154015 TCAAGGACAGCACAATAATTGTCG 59.846 41.667 0.00 0.00 43.23 4.35
2736 8711 5.627499 TCAAGGACAGCACAATAATTGTC 57.373 39.130 0.00 0.00 43.23 3.18
2737 8712 6.350445 GGATTCAAGGACAGCACAATAATTGT 60.350 38.462 0.00 0.00 46.75 2.71
2738 8713 6.038356 GGATTCAAGGACAGCACAATAATTG 58.962 40.000 0.00 0.00 0.00 2.32
2739 8714 5.954150 AGGATTCAAGGACAGCACAATAATT 59.046 36.000 0.00 0.00 0.00 1.40
2740 8715 5.513233 AGGATTCAAGGACAGCACAATAAT 58.487 37.500 0.00 0.00 0.00 1.28
2741 8716 4.922206 AGGATTCAAGGACAGCACAATAA 58.078 39.130 0.00 0.00 0.00 1.40
2742 8717 4.225942 AGAGGATTCAAGGACAGCACAATA 59.774 41.667 0.00 0.00 0.00 1.90
2743 8718 3.009916 AGAGGATTCAAGGACAGCACAAT 59.990 43.478 0.00 0.00 0.00 2.71
2744 8719 2.373169 AGAGGATTCAAGGACAGCACAA 59.627 45.455 0.00 0.00 0.00 3.33
2745 8720 1.980765 AGAGGATTCAAGGACAGCACA 59.019 47.619 0.00 0.00 0.00 4.57
2746 8721 2.235898 AGAGAGGATTCAAGGACAGCAC 59.764 50.000 0.00 0.00 0.00 4.40
2747 8722 2.544721 AGAGAGGATTCAAGGACAGCA 58.455 47.619 0.00 0.00 0.00 4.41
2748 8723 3.625649 AAGAGAGGATTCAAGGACAGC 57.374 47.619 0.00 0.00 0.00 4.40
2749 8724 5.157940 TGAAAGAGAGGATTCAAGGACAG 57.842 43.478 0.00 0.00 32.89 3.51
2750 8725 5.567037 TTGAAAGAGAGGATTCAAGGACA 57.433 39.130 0.00 0.00 39.81 4.02
2755 8730 4.599241 AGGGTCTTGAAAGAGAGGATTCAA 59.401 41.667 0.00 0.00 41.78 2.69
2756 8731 4.171234 AGGGTCTTGAAAGAGAGGATTCA 58.829 43.478 0.00 0.00 35.32 2.57
2757 8732 4.835284 AGGGTCTTGAAAGAGAGGATTC 57.165 45.455 0.00 0.00 35.32 2.52
2758 8733 4.160626 CGTAGGGTCTTGAAAGAGAGGATT 59.839 45.833 0.00 0.00 35.32 3.01
2759 8734 3.702045 CGTAGGGTCTTGAAAGAGAGGAT 59.298 47.826 0.00 0.00 35.32 3.24
2760 8735 3.090037 CGTAGGGTCTTGAAAGAGAGGA 58.910 50.000 0.00 0.00 35.32 3.71
2761 8736 2.417515 GCGTAGGGTCTTGAAAGAGAGG 60.418 54.545 0.00 0.00 35.32 3.69
2762 8737 2.494073 AGCGTAGGGTCTTGAAAGAGAG 59.506 50.000 0.00 0.00 35.32 3.20
2763 8738 2.492484 GAGCGTAGGGTCTTGAAAGAGA 59.508 50.000 7.35 0.00 37.68 3.10
2764 8739 2.732597 CGAGCGTAGGGTCTTGAAAGAG 60.733 54.545 12.33 0.00 38.53 2.85
2765 8740 1.201647 CGAGCGTAGGGTCTTGAAAGA 59.798 52.381 12.33 0.00 38.53 2.52
2766 8741 1.067776 ACGAGCGTAGGGTCTTGAAAG 60.068 52.381 12.33 0.00 38.53 2.62
2767 8742 0.963962 ACGAGCGTAGGGTCTTGAAA 59.036 50.000 12.33 0.00 38.53 2.69
2768 8743 1.825090 TACGAGCGTAGGGTCTTGAA 58.175 50.000 12.33 0.00 38.53 2.69
2769 8744 2.048444 ATACGAGCGTAGGGTCTTGA 57.952 50.000 12.33 0.00 38.53 3.02
2770 8745 5.814764 ATATATACGAGCGTAGGGTCTTG 57.185 43.478 12.33 1.21 38.53 3.02
2771 8746 5.942236 TGAATATATACGAGCGTAGGGTCTT 59.058 40.000 12.33 6.01 38.53 3.01
2772 8747 5.353678 GTGAATATATACGAGCGTAGGGTCT 59.646 44.000 12.33 3.18 38.53 3.85
2773 8748 5.353678 AGTGAATATATACGAGCGTAGGGTC 59.646 44.000 8.76 4.56 37.32 4.46
2774 8749 5.251764 AGTGAATATATACGAGCGTAGGGT 58.748 41.667 8.76 0.00 33.77 4.34
2775 8750 5.814764 AGTGAATATATACGAGCGTAGGG 57.185 43.478 8.76 0.00 33.77 3.53
2841 8819 4.811024 TCACAAGCAATAGGATCATCGTTC 59.189 41.667 0.00 0.00 0.00 3.95
2848 8826 5.649831 AGGAAAACTCACAAGCAATAGGATC 59.350 40.000 0.00 0.00 0.00 3.36
2849 8827 5.574188 AGGAAAACTCACAAGCAATAGGAT 58.426 37.500 0.00 0.00 0.00 3.24
2873 8851 6.938698 TCCTACAAACCAACTATGTCCTAA 57.061 37.500 0.00 0.00 0.00 2.69
2882 8860 6.206829 GTGCTTTTCTATCCTACAAACCAACT 59.793 38.462 0.00 0.00 0.00 3.16
2883 8861 6.206829 AGTGCTTTTCTATCCTACAAACCAAC 59.793 38.462 0.00 0.00 0.00 3.77
2886 8864 6.819397 AAGTGCTTTTCTATCCTACAAACC 57.181 37.500 0.00 0.00 0.00 3.27
2907 8885 6.878923 TCGGGGATGTGCATATAGAATAAAAG 59.121 38.462 0.00 0.00 0.00 2.27
2912 8890 4.041567 TGTTCGGGGATGTGCATATAGAAT 59.958 41.667 0.00 0.00 0.00 2.40
2937 8928 2.555757 GGGAGATATGCACTTTGATGGC 59.444 50.000 0.00 0.00 0.00 4.40
2948 8939 0.474660 AGGAGGTGGGGGAGATATGC 60.475 60.000 0.00 0.00 0.00 3.14
2967 8966 1.363807 CATCTATGTCGAGCGGGCA 59.636 57.895 0.00 0.00 0.00 5.36
2978 8977 4.141937 TGGTTTCCTTCTCCGACATCTATG 60.142 45.833 0.00 0.00 0.00 2.23
2980 8979 3.437213 TGGTTTCCTTCTCCGACATCTA 58.563 45.455 0.00 0.00 0.00 1.98
2984 8983 2.235402 GGTATGGTTTCCTTCTCCGACA 59.765 50.000 0.00 0.00 0.00 4.35
2987 8986 2.906354 CAGGTATGGTTTCCTTCTCCG 58.094 52.381 0.00 0.00 30.91 4.63
2992 8991 5.450818 TGATTAGCAGGTATGGTTTCCTT 57.549 39.130 0.00 0.00 38.36 3.36
2999 8998 4.516698 GTGGTTGATGATTAGCAGGTATGG 59.483 45.833 0.00 0.00 0.00 2.74
3007 9006 3.876914 TGGATTCGTGGTTGATGATTAGC 59.123 43.478 0.00 0.00 0.00 3.09
3011 9010 3.440173 GTGTTGGATTCGTGGTTGATGAT 59.560 43.478 0.00 0.00 0.00 2.45
3014 9013 2.552315 GTGTGTTGGATTCGTGGTTGAT 59.448 45.455 0.00 0.00 0.00 2.57
3046 9046 2.609825 GCATCGGCGACATCTGAAT 58.390 52.632 13.76 0.00 0.00 2.57
3062 9062 1.965930 GCAGATTGTGTGGTCCGCA 60.966 57.895 0.00 0.00 0.00 5.69
3066 9066 1.131883 GCAGATGCAGATTGTGTGGTC 59.868 52.381 0.00 0.00 41.59 4.02
3069 9069 1.400846 GGAGCAGATGCAGATTGTGTG 59.599 52.381 7.68 0.00 45.16 3.82
3070 9070 1.681166 GGGAGCAGATGCAGATTGTGT 60.681 52.381 7.68 0.00 45.16 3.72
3108 9108 0.109153 TTGCTCCAGTGTCAGCACAT 59.891 50.000 12.42 0.00 45.37 3.21
3114 9114 1.013596 CAACGTTTGCTCCAGTGTCA 58.986 50.000 0.00 0.00 0.00 3.58
3141 9141 1.851021 TTGTGTCTTTGGCATCCGCG 61.851 55.000 0.00 0.00 39.92 6.46
3143 9143 1.197721 GACTTGTGTCTTTGGCATCCG 59.802 52.381 0.00 0.00 39.94 4.18
3145 9145 2.030805 GTGGACTTGTGTCTTTGGCATC 60.031 50.000 0.00 0.00 42.54 3.91
3147 9147 1.388547 GTGGACTTGTGTCTTTGGCA 58.611 50.000 0.00 0.00 42.54 4.92
3162 9162 4.395519 CCGCATCTTTGTGGTGGA 57.604 55.556 0.00 0.00 46.52 4.02
3178 9178 2.171725 GTAAGGATGACGTGGCGCC 61.172 63.158 22.73 22.73 0.00 6.53
3179 9179 0.739813 AAGTAAGGATGACGTGGCGC 60.740 55.000 0.00 0.00 0.00 6.53
3180 9180 0.999406 CAAGTAAGGATGACGTGGCG 59.001 55.000 0.00 0.00 0.00 5.69
3182 9182 3.659786 TGTTCAAGTAAGGATGACGTGG 58.340 45.455 0.00 0.00 29.07 4.94
3187 9187 8.974060 AAACTAGTTTGTTCAAGTAAGGATGA 57.026 30.769 19.94 0.00 0.00 2.92
3195 9195 9.921637 TGAATTTGAAAACTAGTTTGTTCAAGT 57.078 25.926 24.19 21.18 33.50 3.16
3206 9206 9.865321 ATGGTCATTGATGAATTTGAAAACTAG 57.135 29.630 0.00 0.00 38.75 2.57
3219 9219 5.817296 CGTCTTCCTTTATGGTCATTGATGA 59.183 40.000 0.00 0.00 37.07 2.92
3234 9234 0.472471 TCCAACAAGGCGTCTTCCTT 59.528 50.000 0.00 0.00 46.86 3.36
3237 9237 1.878953 TTCTCCAACAAGGCGTCTTC 58.121 50.000 0.00 0.00 37.29 2.87
3247 9247 6.729690 AAAACTCCAATCATTTCTCCAACA 57.270 33.333 0.00 0.00 0.00 3.33


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.