Multiple sequence alignment - TraesCS1B01G410600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G410600 chr1B 100.000 4816 0 0 1 4816 637396242 637401057 0.000000e+00 8894.0
1 TraesCS1B01G410600 chr1B 91.803 122 10 0 1722 1843 409847406 409847527 2.300000e-38 171.0
2 TraesCS1B01G410600 chr1B 90.517 116 8 3 4704 4816 84971541 84971426 3.000000e-32 150.0
3 TraesCS1B01G410600 chr1B 91.489 47 4 0 1848 1894 59834603 59834649 1.120000e-06 65.8
4 TraesCS1B01G410600 chr1B 100.000 31 0 0 1691 1721 19287770 19287800 1.870000e-04 58.4
5 TraesCS1B01G410600 chr1D 94.916 3934 131 29 500 4388 462333608 462337517 0.000000e+00 6093.0
6 TraesCS1B01G410600 chr1D 85.306 245 29 5 11 253 465452772 465452533 3.720000e-61 246.0
7 TraesCS1B01G410600 chr1D 89.231 130 10 4 1722 1849 373113783 373113910 4.990000e-35 159.0
8 TraesCS1B01G410600 chr1D 78.008 241 44 6 1073 1310 71608384 71608150 5.020000e-30 143.0
9 TraesCS1B01G410600 chr1A 96.649 2298 69 4 1846 4139 554103832 554106125 0.000000e+00 3810.0
10 TraesCS1B01G410600 chr1A 95.120 1250 51 5 319 1558 554101861 554103110 0.000000e+00 1962.0
11 TraesCS1B01G410600 chr1A 84.507 284 28 11 4538 4816 120020594 120020322 2.860000e-67 267.0
12 TraesCS1B01G410600 chr1A 91.589 107 6 2 1584 1690 554103737 554103840 1.400000e-30 145.0
13 TraesCS1B01G410600 chr4B 85.659 1290 144 14 2432 3701 619138911 619140179 0.000000e+00 1319.0
14 TraesCS1B01G410600 chr4B 81.250 592 104 6 3125 3711 619364312 619363723 5.640000e-129 472.0
15 TraesCS1B01G410600 chr4B 83.598 378 34 12 444 810 619080169 619080529 3.590000e-86 329.0
16 TraesCS1B01G410600 chr4B 88.636 176 10 7 840 1005 619080516 619080691 6.320000e-49 206.0
17 TraesCS1B01G410600 chr4B 85.714 126 15 1 3698 3823 619140550 619140672 3.910000e-26 130.0
18 TraesCS1B01G410600 chr4B 87.500 88 5 5 1592 1678 80678358 80678276 3.970000e-16 97.1
19 TraesCS1B01G410600 chr4B 83.146 89 13 1 1590 1678 189821012 189821098 4.000000e-11 80.5
20 TraesCS1B01G410600 chr5A 80.877 1140 191 18 2596 3711 666308818 666307682 0.000000e+00 872.0
21 TraesCS1B01G410600 chr5A 79.664 595 109 11 3128 3716 47460599 47460011 7.450000e-113 418.0
22 TraesCS1B01G410600 chr5A 85.306 245 33 3 11 253 359649402 359649159 2.880000e-62 250.0
23 TraesCS1B01G410600 chr5A 82.178 202 36 0 1090 1291 666309869 666309668 1.780000e-39 174.0
24 TraesCS1B01G410600 chr5A 87.129 101 12 1 2631 2730 666307155 666307255 3.940000e-21 113.0
25 TraesCS1B01G410600 chr5A 79.167 168 27 6 279 443 411478034 411478196 5.100000e-20 110.0
26 TraesCS1B01G410600 chr5A 97.143 35 1 0 693 727 666307001 666307035 5.210000e-05 60.2
27 TraesCS1B01G410600 chr4D 82.906 585 96 4 3125 3707 485538795 485539377 1.540000e-144 523.0
28 TraesCS1B01G410600 chr4D 85.302 381 25 9 444 810 485525990 485526353 9.850000e-97 364.0
29 TraesCS1B01G410600 chr4D 93.143 175 12 0 1090 1264 485526542 485526716 1.720000e-64 257.0
30 TraesCS1B01G410600 chr4D 83.051 236 34 2 1062 1291 485537030 485537265 4.880000e-50 209.0
31 TraesCS1B01G410600 chr4D 83.929 224 10 13 840 1054 485526340 485526546 1.770000e-44 191.0
32 TraesCS1B01G410600 chr4D 88.199 161 16 3 1691 1849 426785272 426785113 6.360000e-44 189.0
33 TraesCS1B01G410600 chr4A 87.751 449 30 14 4389 4815 737432325 737432770 7.200000e-138 501.0
34 TraesCS1B01G410600 chr4A 79.920 249 27 16 4589 4816 719209018 719209264 1.390000e-35 161.0
35 TraesCS1B01G410600 chr4A 93.846 65 4 0 1784 1848 628419475 628419539 1.100000e-16 99.0
36 TraesCS1B01G410600 chr3D 90.800 250 23 0 4139 4388 570129315 570129066 7.720000e-88 335.0
37 TraesCS1B01G410600 chr3D 90.688 247 23 0 4142 4388 570117778 570117532 3.590000e-86 329.0
38 TraesCS1B01G410600 chr3D 90.400 250 24 0 4139 4388 570123990 570123741 3.590000e-86 329.0
39 TraesCS1B01G410600 chr3D 90.400 250 24 0 4139 4388 570126655 570126406 3.590000e-86 329.0
40 TraesCS1B01G410600 chr3D 90.400 250 24 0 4139 4388 570139869 570139620 3.590000e-86 329.0
41 TraesCS1B01G410600 chr3D 89.641 251 25 1 4139 4388 570120436 570120186 7.780000e-83 318.0
42 TraesCS1B01G410600 chr3D 89.600 250 26 0 4139 4388 570123102 570122853 7.780000e-83 318.0
43 TraesCS1B01G410600 chr3D 88.690 168 17 2 3897 4063 577649578 577649412 2.270000e-48 204.0
44 TraesCS1B01G410600 chr3D 92.800 125 7 2 1724 1848 91684799 91684921 3.830000e-41 180.0
45 TraesCS1B01G410600 chr3D 86.538 156 20 1 1691 1846 45407559 45407405 2.300000e-38 171.0
46 TraesCS1B01G410600 chr3D 85.417 96 8 5 1585 1679 401476744 401476834 1.430000e-15 95.3
47 TraesCS1B01G410600 chrUn 90.688 247 23 0 4142 4388 287063132 287062886 3.590000e-86 329.0
48 TraesCS1B01G410600 chr2A 81.163 430 59 18 4402 4816 749340637 749341059 4.650000e-85 326.0
49 TraesCS1B01G410600 chr2A 86.982 169 20 2 3897 4064 88988535 88988702 6.360000e-44 189.0
50 TraesCS1B01G410600 chr2A 76.224 143 24 7 1165 1305 761541927 761541793 3.110000e-07 67.6
51 TraesCS1B01G410600 chr5D 76.562 576 126 9 3128 3700 58502381 58502950 1.680000e-79 307.0
52 TraesCS1B01G410600 chr5D 85.425 247 29 6 8 250 329253601 329253844 2.880000e-62 250.0
53 TraesCS1B01G410600 chr5D 88.750 160 18 0 3897 4056 421658157 421657998 3.800000e-46 196.0
54 TraesCS1B01G410600 chr5D 85.987 157 20 2 1693 1847 112949873 112949717 2.980000e-37 167.0
55 TraesCS1B01G410600 chr5D 89.831 118 7 5 4704 4816 85571331 85571214 3.880000e-31 147.0
56 TraesCS1B01G410600 chr5D 85.484 62 6 2 1848 1908 373948485 373948544 1.450000e-05 62.1
57 TraesCS1B01G410600 chr7A 83.721 301 45 2 3127 3425 91362518 91362816 1.020000e-71 281.0
58 TraesCS1B01G410600 chr7A 86.628 172 19 4 3896 4065 254880713 254880544 2.290000e-43 187.0
59 TraesCS1B01G410600 chr7A 89.922 129 9 3 1722 1848 444983939 444984065 3.860000e-36 163.0
60 TraesCS1B01G410600 chr7A 78.475 223 31 8 1088 1310 47517495 47517290 3.910000e-26 130.0
61 TraesCS1B01G410600 chr7A 84.043 94 10 3 1760 1849 487979264 487979172 8.590000e-13 86.1
62 TraesCS1B01G410600 chr7B 83.389 301 46 2 3127 3425 40655438 40655736 4.750000e-70 276.0
63 TraesCS1B01G410600 chr7B 91.379 116 5 5 4704 4816 20393658 20393545 2.320000e-33 154.0
64 TraesCS1B01G410600 chr7B 100.000 31 0 0 1691 1721 545196790 545196760 1.870000e-04 58.4
65 TraesCS1B01G410600 chr3B 87.137 241 28 3 11 250 7616965 7617203 2.210000e-68 270.0
66 TraesCS1B01G410600 chr3B 86.628 172 21 2 3897 4067 758621589 758621419 6.360000e-44 189.0
67 TraesCS1B01G410600 chr3B 91.379 116 5 5 4704 4816 90740066 90739953 2.320000e-33 154.0
68 TraesCS1B01G410600 chr2B 87.137 241 25 6 13 250 641270466 641270703 7.940000e-68 268.0
69 TraesCS1B01G410600 chr2B 86.475 244 24 7 11 249 569232213 569231974 4.780000e-65 259.0
70 TraesCS1B01G410600 chr2B 81.481 243 34 7 1072 1310 41375288 41375523 6.360000e-44 189.0
71 TraesCS1B01G410600 chr2B 91.379 116 5 5 4704 4816 106546973 106547086 2.320000e-33 154.0
72 TraesCS1B01G410600 chr2B 85.714 84 9 2 1596 1679 265432008 265432088 8.590000e-13 86.1
73 TraesCS1B01G410600 chr2B 88.406 69 5 2 1612 1680 73611066 73611131 4.000000e-11 80.5
74 TraesCS1B01G410600 chr7D 80.409 342 65 2 2661 3001 89831017 89831357 4.780000e-65 259.0
75 TraesCS1B01G410600 chr7D 88.710 62 5 1 1848 1909 8476753 8476812 1.860000e-09 75.0
76 TraesCS1B01G410600 chr7D 83.784 74 7 4 1848 1919 173209716 173209646 1.120000e-06 65.8
77 TraesCS1B01G410600 chr2D 86.364 242 27 4 11 249 484415102 484414864 4.780000e-65 259.0
78 TraesCS1B01G410600 chr2D 81.743 241 35 5 1073 1310 607810610 607810844 4.920000e-45 193.0
79 TraesCS1B01G410600 chr2D 91.045 67 6 0 1848 1914 598887430 598887496 1.850000e-14 91.6
80 TraesCS1B01G410600 chr5B 84.800 250 31 7 4 250 460468487 460468242 1.340000e-60 244.0
81 TraesCS1B01G410600 chr5B 100.000 31 0 0 1691 1721 174550082 174550052 1.870000e-04 58.4
82 TraesCS1B01G410600 chr5B 100.000 31 0 0 1691 1721 268065062 268065032 1.870000e-04 58.4
83 TraesCS1B01G410600 chr5B 100.000 28 0 0 1848 1875 476074410 476074437 9.000000e-03 52.8
84 TraesCS1B01G410600 chr6B 84.400 250 36 3 6 253 313555048 313554800 4.820000e-60 243.0
85 TraesCS1B01G410600 chr6A 86.982 169 20 2 3898 4065 377181328 377181161 6.360000e-44 189.0
86 TraesCS1B01G410600 chr6A 86.127 173 22 2 3897 4068 284822641 284822470 8.230000e-43 185.0
87 TraesCS1B01G410600 chr6A 89.922 129 7 5 1722 1849 596073434 596073557 1.390000e-35 161.0
88 TraesCS1B01G410600 chr6A 80.851 94 12 4 1757 1846 160130093 160130002 8.650000e-08 69.4
89 TraesCS1B01G410600 chr3A 79.348 276 27 13 4567 4816 197199047 197198776 2.980000e-37 167.0
90 TraesCS1B01G410600 chr3A 86.111 72 7 3 1608 1679 22731983 22731915 1.860000e-09 75.0
91 TraesCS1B01G410600 chr6D 83.505 97 10 4 1597 1690 3491230 3491137 8.590000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G410600 chr1B 637396242 637401057 4815 False 8894.000000 8894 100.000000 1 4816 1 chr1B.!!$F4 4815
1 TraesCS1B01G410600 chr1D 462333608 462337517 3909 False 6093.000000 6093 94.916000 500 4388 1 chr1D.!!$F2 3888
2 TraesCS1B01G410600 chr1A 554101861 554106125 4264 False 1972.333333 3810 94.452667 319 4139 3 chr1A.!!$F1 3820
3 TraesCS1B01G410600 chr4B 619138911 619140672 1761 False 724.500000 1319 85.686500 2432 3823 2 chr4B.!!$F3 1391
4 TraesCS1B01G410600 chr4B 619363723 619364312 589 True 472.000000 472 81.250000 3125 3711 1 chr4B.!!$R2 586
5 TraesCS1B01G410600 chr4B 619080169 619080691 522 False 267.500000 329 86.117000 444 1005 2 chr4B.!!$F2 561
6 TraesCS1B01G410600 chr5A 666307682 666309869 2187 True 523.000000 872 81.527500 1090 3711 2 chr5A.!!$R3 2621
7 TraesCS1B01G410600 chr5A 47460011 47460599 588 True 418.000000 418 79.664000 3128 3716 1 chr5A.!!$R1 588
8 TraesCS1B01G410600 chr4D 485537030 485539377 2347 False 366.000000 523 82.978500 1062 3707 2 chr4D.!!$F2 2645
9 TraesCS1B01G410600 chr4D 485525990 485526716 726 False 270.666667 364 87.458000 444 1264 3 chr4D.!!$F1 820
10 TraesCS1B01G410600 chr3D 570117532 570129315 11783 True 326.333333 335 90.254833 4139 4388 6 chr3D.!!$R4 249
11 TraesCS1B01G410600 chr5D 58502381 58502950 569 False 307.000000 307 76.562000 3128 3700 1 chr5D.!!$F1 572

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
27 28 0.113190 CCTCCACCTCTTGGCCTTTT 59.887 55.000 3.32 0.0 46.47 2.27 F
431 433 0.179468 AACCGGTTGTATGGGATCGG 59.821 55.000 21.56 0.0 42.69 4.18 F
1457 1507 0.315568 GGCCCTATACAGCTGACTCG 59.684 60.000 23.35 5.8 0.00 4.18 F
2937 3684 2.182791 CTCGTGCAGCTCATCGGT 59.817 61.111 0.00 0.0 0.00 4.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1690 2348 2.428890 CAGATGTGTCCTAGACAGACCC 59.571 54.545 0.00 0.00 43.57 4.46 R
2189 2872 2.281484 TTGCCGCACTCAAGGGTC 60.281 61.111 0.00 0.00 0.00 4.46 R
3298 4161 0.529833 AGGAGCTGTCGTCAGTGATG 59.470 55.000 11.28 5.96 43.05 3.07 R
4496 17279 0.035056 CCTCTGCCGGGACTCATTTT 60.035 55.000 2.18 0.00 0.00 1.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 2.222227 AATTTCCTCCACCTCTTGGC 57.778 50.000 0.00 0.00 46.47 4.52
23 24 0.332972 ATTTCCTCCACCTCTTGGCC 59.667 55.000 0.00 0.00 46.47 5.36
24 25 0.772124 TTTCCTCCACCTCTTGGCCT 60.772 55.000 3.32 0.00 46.47 5.19
25 26 0.772124 TTCCTCCACCTCTTGGCCTT 60.772 55.000 3.32 0.00 46.47 4.35
26 27 0.772124 TCCTCCACCTCTTGGCCTTT 60.772 55.000 3.32 0.00 46.47 3.11
27 28 0.113190 CCTCCACCTCTTGGCCTTTT 59.887 55.000 3.32 0.00 46.47 2.27
28 29 1.354368 CCTCCACCTCTTGGCCTTTTA 59.646 52.381 3.32 0.00 46.47 1.52
29 30 2.225017 CCTCCACCTCTTGGCCTTTTAA 60.225 50.000 3.32 0.00 46.47 1.52
30 31 3.084786 CTCCACCTCTTGGCCTTTTAAG 58.915 50.000 3.32 0.00 46.47 1.85
31 32 2.225017 TCCACCTCTTGGCCTTTTAAGG 60.225 50.000 3.32 6.49 46.47 2.69
39 40 1.900245 GGCCTTTTAAGGTCCGTTGA 58.100 50.000 10.09 0.00 45.13 3.18
40 41 2.443416 GGCCTTTTAAGGTCCGTTGAT 58.557 47.619 10.09 0.00 45.13 2.57
41 42 3.613030 GGCCTTTTAAGGTCCGTTGATA 58.387 45.455 10.09 0.00 45.13 2.15
42 43 4.204799 GGCCTTTTAAGGTCCGTTGATAT 58.795 43.478 10.09 0.00 45.13 1.63
43 44 4.643334 GGCCTTTTAAGGTCCGTTGATATT 59.357 41.667 10.09 0.00 45.13 1.28
44 45 5.126545 GGCCTTTTAAGGTCCGTTGATATTT 59.873 40.000 10.09 0.00 45.13 1.40
45 46 6.319405 GGCCTTTTAAGGTCCGTTGATATTTA 59.681 38.462 10.09 0.00 45.13 1.40
46 47 7.148035 GGCCTTTTAAGGTCCGTTGATATTTAA 60.148 37.037 10.09 0.00 45.13 1.52
48 49 8.953313 CCTTTTAAGGTCCGTTGATATTTAAGT 58.047 33.333 0.15 0.00 41.41 2.24
54 55 8.851541 AGGTCCGTTGATATTTAAGTTAAACA 57.148 30.769 10.20 0.00 0.00 2.83
55 56 8.724229 AGGTCCGTTGATATTTAAGTTAAACAC 58.276 33.333 10.20 5.93 0.00 3.32
56 57 8.505625 GGTCCGTTGATATTTAAGTTAAACACA 58.494 33.333 10.20 8.14 0.00 3.72
57 58 9.881529 GTCCGTTGATATTTAAGTTAAACACAA 57.118 29.630 10.20 12.74 0.00 3.33
122 123 8.868522 AACATCTCTAGAAACATTTTCCATCA 57.131 30.769 0.00 0.00 0.00 3.07
123 124 8.868522 ACATCTCTAGAAACATTTTCCATCAA 57.131 30.769 0.00 0.00 0.00 2.57
124 125 9.471702 ACATCTCTAGAAACATTTTCCATCAAT 57.528 29.630 0.00 0.00 0.00 2.57
156 157 9.822185 ATATATCGATAATAACCGGTTTTACCC 57.178 33.333 27.64 15.75 33.75 3.69
168 169 4.326504 GGTTTTACCCGATATTCTCCGA 57.673 45.455 0.00 0.00 30.04 4.55
169 170 4.696455 GGTTTTACCCGATATTCTCCGAA 58.304 43.478 0.00 0.00 30.04 4.30
170 171 5.118286 GGTTTTACCCGATATTCTCCGAAA 58.882 41.667 0.00 0.00 30.04 3.46
171 172 5.007039 GGTTTTACCCGATATTCTCCGAAAC 59.993 44.000 0.00 0.00 30.04 2.78
172 173 2.904697 ACCCGATATTCTCCGAAACC 57.095 50.000 0.00 0.00 0.00 3.27
173 174 1.415289 ACCCGATATTCTCCGAAACCC 59.585 52.381 0.00 0.00 0.00 4.11
174 175 1.692519 CCCGATATTCTCCGAAACCCT 59.307 52.381 0.00 0.00 0.00 4.34
175 176 2.104281 CCCGATATTCTCCGAAACCCTT 59.896 50.000 0.00 0.00 0.00 3.95
176 177 3.433173 CCCGATATTCTCCGAAACCCTTT 60.433 47.826 0.00 0.00 0.00 3.11
177 178 3.808174 CCGATATTCTCCGAAACCCTTTC 59.192 47.826 0.00 0.00 36.32 2.62
197 198 2.913777 GGTGGCACCGAAATACTTTC 57.086 50.000 22.83 0.00 36.32 2.62
211 212 6.986904 AAATACTTTCGGATCCTCAGAAAC 57.013 37.500 10.75 0.00 36.05 2.78
212 213 5.941555 ATACTTTCGGATCCTCAGAAACT 57.058 39.130 10.75 4.47 36.05 2.66
213 214 7.419711 AATACTTTCGGATCCTCAGAAACTA 57.580 36.000 10.75 6.36 36.05 2.24
214 215 5.941555 ACTTTCGGATCCTCAGAAACTAT 57.058 39.130 10.75 0.00 36.05 2.12
215 216 6.301169 ACTTTCGGATCCTCAGAAACTATT 57.699 37.500 10.75 0.00 36.05 1.73
216 217 6.712276 ACTTTCGGATCCTCAGAAACTATTT 58.288 36.000 10.75 0.00 36.05 1.40
217 218 6.595716 ACTTTCGGATCCTCAGAAACTATTTG 59.404 38.462 10.75 2.66 36.05 2.32
218 219 5.932619 TCGGATCCTCAGAAACTATTTGA 57.067 39.130 10.75 0.00 0.00 2.69
219 220 6.294361 TCGGATCCTCAGAAACTATTTGAA 57.706 37.500 10.75 0.00 0.00 2.69
220 221 6.707290 TCGGATCCTCAGAAACTATTTGAAA 58.293 36.000 10.75 0.00 0.00 2.69
221 222 7.338710 TCGGATCCTCAGAAACTATTTGAAAT 58.661 34.615 10.75 0.00 0.00 2.17
222 223 8.482943 TCGGATCCTCAGAAACTATTTGAAATA 58.517 33.333 10.75 0.00 0.00 1.40
223 224 9.277783 CGGATCCTCAGAAACTATTTGAAATAT 57.722 33.333 10.75 0.00 0.00 1.28
253 254 9.868277 TGAAACAATTCCACAAATATATTGTCC 57.132 29.630 0.00 0.00 38.19 4.02
254 255 9.313118 GAAACAATTCCACAAATATATTGTCCC 57.687 33.333 0.00 0.00 38.19 4.46
255 256 7.360113 ACAATTCCACAAATATATTGTCCCC 57.640 36.000 0.00 0.00 35.20 4.81
256 257 6.900186 ACAATTCCACAAATATATTGTCCCCA 59.100 34.615 0.00 0.00 35.20 4.96
257 258 7.401493 ACAATTCCACAAATATATTGTCCCCAA 59.599 33.333 0.00 0.00 35.20 4.12
258 259 7.601705 ATTCCACAAATATATTGTCCCCAAG 57.398 36.000 0.00 0.00 33.17 3.61
259 260 4.892934 TCCACAAATATATTGTCCCCAAGC 59.107 41.667 0.00 0.00 33.17 4.01
260 261 4.261572 CCACAAATATATTGTCCCCAAGCG 60.262 45.833 0.00 0.00 33.17 4.68
261 262 3.888930 ACAAATATATTGTCCCCAAGCGG 59.111 43.478 0.00 0.00 33.17 5.52
262 263 4.141287 CAAATATATTGTCCCCAAGCGGA 58.859 43.478 0.00 0.00 33.17 5.54
263 264 3.703001 ATATATTGTCCCCAAGCGGAG 57.297 47.619 0.00 0.00 33.17 4.63
264 265 1.507140 ATATTGTCCCCAAGCGGAGA 58.493 50.000 0.00 0.00 33.17 3.71
265 266 0.830648 TATTGTCCCCAAGCGGAGAG 59.169 55.000 0.00 0.00 33.17 3.20
266 267 0.909610 ATTGTCCCCAAGCGGAGAGA 60.910 55.000 0.00 0.00 33.17 3.10
267 268 1.827399 TTGTCCCCAAGCGGAGAGAC 61.827 60.000 0.00 0.00 30.62 3.36
268 269 3.068691 TCCCCAAGCGGAGAGACG 61.069 66.667 0.00 0.00 0.00 4.18
269 270 3.068691 CCCCAAGCGGAGAGACGA 61.069 66.667 0.00 0.00 35.47 4.20
270 271 2.492090 CCCAAGCGGAGAGACGAG 59.508 66.667 0.00 0.00 35.47 4.18
271 272 2.344203 CCCAAGCGGAGAGACGAGT 61.344 63.158 0.00 0.00 35.47 4.18
272 273 1.153939 CCAAGCGGAGAGACGAGTG 60.154 63.158 0.00 0.00 35.47 3.51
273 274 1.153939 CAAGCGGAGAGACGAGTGG 60.154 63.158 0.00 0.00 35.47 4.00
274 275 1.604023 AAGCGGAGAGACGAGTGGT 60.604 57.895 0.00 0.00 35.47 4.16
275 276 1.867919 AAGCGGAGAGACGAGTGGTG 61.868 60.000 0.00 0.00 35.47 4.17
276 277 2.333417 GCGGAGAGACGAGTGGTGA 61.333 63.158 0.00 0.00 35.47 4.02
277 278 1.863662 GCGGAGAGACGAGTGGTGAA 61.864 60.000 0.00 0.00 35.47 3.18
278 279 0.811915 CGGAGAGACGAGTGGTGAAT 59.188 55.000 0.00 0.00 35.47 2.57
279 280 1.202582 CGGAGAGACGAGTGGTGAATT 59.797 52.381 0.00 0.00 35.47 2.17
280 281 2.352814 CGGAGAGACGAGTGGTGAATTT 60.353 50.000 0.00 0.00 35.47 1.82
281 282 3.665190 GGAGAGACGAGTGGTGAATTTT 58.335 45.455 0.00 0.00 0.00 1.82
282 283 4.065789 GGAGAGACGAGTGGTGAATTTTT 58.934 43.478 0.00 0.00 0.00 1.94
283 284 5.235516 GGAGAGACGAGTGGTGAATTTTTA 58.764 41.667 0.00 0.00 0.00 1.52
284 285 5.120363 GGAGAGACGAGTGGTGAATTTTTAC 59.880 44.000 0.00 0.00 0.00 2.01
285 286 5.855045 AGAGACGAGTGGTGAATTTTTACT 58.145 37.500 0.00 0.00 0.00 2.24
286 287 5.927115 AGAGACGAGTGGTGAATTTTTACTC 59.073 40.000 0.00 0.00 35.58 2.59
287 288 4.995487 AGACGAGTGGTGAATTTTTACTCC 59.005 41.667 0.00 0.00 35.52 3.85
288 289 3.744426 ACGAGTGGTGAATTTTTACTCCG 59.256 43.478 0.00 0.00 35.52 4.63
289 290 3.424433 CGAGTGGTGAATTTTTACTCCGC 60.424 47.826 0.00 0.00 35.52 5.54
290 291 2.817844 AGTGGTGAATTTTTACTCCGCC 59.182 45.455 0.00 0.00 32.74 6.13
291 292 2.094906 GTGGTGAATTTTTACTCCGCCC 60.095 50.000 0.00 0.00 0.00 6.13
292 293 1.475280 GGTGAATTTTTACTCCGCCCC 59.525 52.381 0.00 0.00 0.00 5.80
293 294 2.164338 GTGAATTTTTACTCCGCCCCA 58.836 47.619 0.00 0.00 0.00 4.96
294 295 2.559231 GTGAATTTTTACTCCGCCCCAA 59.441 45.455 0.00 0.00 0.00 4.12
295 296 2.823154 TGAATTTTTACTCCGCCCCAAG 59.177 45.455 0.00 0.00 0.00 3.61
296 297 1.182667 ATTTTTACTCCGCCCCAAGC 58.817 50.000 0.00 0.00 38.52 4.01
313 314 4.966850 CAAGCGGTGGAGTAAATATACG 57.033 45.455 0.00 0.00 37.11 3.06
314 315 3.655276 AGCGGTGGAGTAAATATACGG 57.345 47.619 0.00 0.00 37.11 4.02
315 316 2.298163 AGCGGTGGAGTAAATATACGGG 59.702 50.000 0.00 0.00 37.11 5.28
316 317 2.680577 CGGTGGAGTAAATATACGGGC 58.319 52.381 0.00 0.00 37.11 6.13
317 318 2.680577 GGTGGAGTAAATATACGGGCG 58.319 52.381 0.00 0.00 37.11 6.13
359 360 6.990341 AAATTATCCACCACTAACGGTTAC 57.010 37.500 0.00 0.00 37.07 2.50
368 370 1.753073 ACTAACGGTTACTGGGATCGG 59.247 52.381 0.00 0.00 0.00 4.18
373 375 1.700955 GGTTACTGGGATCGGCTAGA 58.299 55.000 0.00 0.00 0.00 2.43
395 397 2.029110 TCCCGGTTAGAGGTGTAAAACG 60.029 50.000 0.00 0.00 0.00 3.60
396 398 2.029110 CCCGGTTAGAGGTGTAAAACGA 60.029 50.000 0.00 0.00 0.00 3.85
403 405 6.038603 GGTTAGAGGTGTAAAACGAGGTTTTT 59.961 38.462 11.23 0.00 42.11 1.94
420 422 4.453478 GGTTTTTACTCCTCTAACCGGTTG 59.547 45.833 30.08 18.70 0.00 3.77
423 425 6.610075 TTTTACTCCTCTAACCGGTTGTAT 57.390 37.500 30.08 5.82 0.00 2.29
430 432 2.363038 TCTAACCGGTTGTATGGGATCG 59.637 50.000 30.08 5.14 0.00 3.69
431 433 0.179468 AACCGGTTGTATGGGATCGG 59.821 55.000 21.56 0.00 42.69 4.18
446 448 3.009143 GGGATCGGTTAGAAATGCCCTAT 59.991 47.826 0.00 0.00 31.49 2.57
748 765 3.691342 CGTTCACCGGCCAGAGGA 61.691 66.667 0.00 0.00 0.00 3.71
780 806 3.713288 CTCCATTAGCACGGTCGAAATA 58.287 45.455 0.00 0.00 0.00 1.40
803 829 8.997621 ATACGTAACATATCCATACCAATCAC 57.002 34.615 0.00 0.00 0.00 3.06
810 836 3.266510 TCCATACCAATCACTGCACTC 57.733 47.619 0.00 0.00 0.00 3.51
812 838 4.030216 TCCATACCAATCACTGCACTCTA 58.970 43.478 0.00 0.00 0.00 2.43
979 1015 1.509644 CGCACACAGTCCACATTGCT 61.510 55.000 0.00 0.00 0.00 3.91
1443 1493 1.153005 CTACTACGGACGAGGCCCT 60.153 63.158 0.00 0.00 0.00 5.19
1457 1507 0.315568 GGCCCTATACAGCTGACTCG 59.684 60.000 23.35 5.80 0.00 4.18
1561 1914 2.748388 TCTACCCAACTTAGCCTCCTC 58.252 52.381 0.00 0.00 0.00 3.71
1579 1932 6.729187 CCTCCTCCGATTCAAATTAATTGTC 58.271 40.000 0.39 0.00 40.11 3.18
1605 2263 9.258826 CGTAGCTTTAGTATAAGTACTCTCTCA 57.741 37.037 0.00 0.00 41.35 3.27
1698 2356 9.239551 ACTTTAGGTAAATTTATTGGGTCTGTC 57.760 33.333 0.31 0.00 0.00 3.51
1711 2369 2.428890 GGGTCTGTCTAGGACACATCTG 59.571 54.545 0.00 0.00 37.67 2.90
1714 2372 3.957497 GTCTGTCTAGGACACATCTGGAT 59.043 47.826 0.00 0.00 37.67 3.41
1715 2373 3.956848 TCTGTCTAGGACACATCTGGATG 59.043 47.826 8.81 8.81 44.15 3.51
1734 2394 4.083324 GGATGTGACACCACTATGTTTGTG 60.083 45.833 2.45 0.00 43.55 3.33
1795 2455 3.637911 TGCCGTGTTATTTATGGGAGT 57.362 42.857 0.00 0.00 0.00 3.85
1806 2466 9.391006 TGTTATTTATGGGAGTTTAGATGTGAC 57.609 33.333 0.00 0.00 0.00 3.67
1807 2467 9.391006 GTTATTTATGGGAGTTTAGATGTGACA 57.609 33.333 0.00 0.00 0.00 3.58
2189 2872 4.509616 TGACCACTTACATCATTAACGGG 58.490 43.478 0.00 0.00 0.00 5.28
2442 3125 3.838244 TGCGGGCTTATTAGAACAGAT 57.162 42.857 0.00 0.00 0.00 2.90
2479 3179 4.695217 TTCGGCAAAATTCTGATACACC 57.305 40.909 0.00 0.00 0.00 4.16
2700 3447 2.646175 CGACTTCGAGAAGGGGGCA 61.646 63.158 16.16 0.00 42.53 5.36
2937 3684 2.182791 CTCGTGCAGCTCATCGGT 59.817 61.111 0.00 0.00 0.00 4.69
3072 3849 3.417101 AGCCCATCAGATAGAGTAGTCG 58.583 50.000 0.00 0.00 0.00 4.18
3146 4009 3.198417 TCTTCAGGCATGAGATTGTGCTA 59.802 43.478 0.00 0.00 41.04 3.49
3198 4061 2.919856 ACTGGGAGCAGTGCGTCT 60.920 61.111 10.00 0.00 33.58 4.18
3368 4231 2.607750 ATGACCACCGGCAGGACT 60.608 61.111 19.58 0.00 41.02 3.85
3395 4258 2.159366 CGAGTCGGATGTCTACAGCTTT 60.159 50.000 4.10 0.00 31.98 3.51
3431 4294 3.379865 GATTGCGTGCGGTAGGGGA 62.380 63.158 0.00 0.00 0.00 4.81
3461 4327 0.560193 TAGCTCAGCAGGAGGAGGAT 59.440 55.000 0.00 0.00 44.22 3.24
3500 4366 1.713647 TGGGTGTGGAATTGGTATGGT 59.286 47.619 0.00 0.00 0.00 3.55
3506 4372 1.497286 TGGAATTGGTATGGTAGGGGC 59.503 52.381 0.00 0.00 0.00 5.80
3737 4977 6.412943 CGGTTGACATACATAGTTGTACTACG 59.587 42.308 1.74 0.00 41.02 3.51
3879 5122 5.417266 TCTTGTTTCACAGGAACATTCAACA 59.583 36.000 0.00 0.00 30.91 3.33
3881 5124 6.030548 TGTTTCACAGGAACATTCAACAAA 57.969 33.333 0.00 0.00 31.35 2.83
3980 5225 6.936335 TCAGTTTGTTGAAGATGCTCATAGAA 59.064 34.615 0.00 0.00 0.00 2.10
3984 5229 9.713740 GTTTGTTGAAGATGCTCATAGAAATAG 57.286 33.333 0.00 0.00 0.00 1.73
4020 5265 6.157123 TGTGTGTTCATAGGGGTGATTGTATA 59.843 38.462 0.00 0.00 0.00 1.47
4084 5329 4.685169 AACATTCACGGTGTCATTCATC 57.315 40.909 8.17 0.00 0.00 2.92
4180 5429 1.000506 AGCTACGCGGTACCCATTATG 59.999 52.381 12.47 0.00 0.00 1.90
4188 5437 1.002773 GGTACCCATTATGGTAGGCGG 59.997 57.143 10.65 0.00 41.47 6.13
4199 5448 1.454539 GTAGGCGGCCAATATGGGT 59.545 57.895 23.09 0.00 38.19 4.51
4290 5539 4.476846 TCAGAATACCTTTTATGGGCCTGA 59.523 41.667 4.53 0.00 0.00 3.86
4294 5543 5.922960 ATACCTTTTATGGGCCTGATACA 57.077 39.130 4.53 0.00 0.00 2.29
4333 15351 3.637273 GGGCCCGGTCAGACAAGT 61.637 66.667 5.69 0.00 0.00 3.16
4389 17172 9.937175 GTGACTAGTGGATTCATTATTTTTAGC 57.063 33.333 0.00 0.00 0.00 3.09
4390 17173 9.905713 TGACTAGTGGATTCATTATTTTTAGCT 57.094 29.630 0.00 0.00 0.00 3.32
4392 17175 9.125026 ACTAGTGGATTCATTATTTTTAGCTGG 57.875 33.333 0.00 0.00 0.00 4.85
4393 17176 7.961326 AGTGGATTCATTATTTTTAGCTGGT 57.039 32.000 0.00 0.00 0.00 4.00
4394 17177 8.366359 AGTGGATTCATTATTTTTAGCTGGTT 57.634 30.769 0.00 0.00 0.00 3.67
4395 17178 8.815912 AGTGGATTCATTATTTTTAGCTGGTTT 58.184 29.630 0.00 0.00 0.00 3.27
4396 17179 9.087424 GTGGATTCATTATTTTTAGCTGGTTTC 57.913 33.333 0.00 0.00 0.00 2.78
4397 17180 9.034800 TGGATTCATTATTTTTAGCTGGTTTCT 57.965 29.630 0.00 0.00 0.00 2.52
4403 17186 9.450807 CATTATTTTTAGCTGGTTTCTATTCGG 57.549 33.333 0.00 0.00 0.00 4.30
4404 17187 4.957759 TTTTAGCTGGTTTCTATTCGGC 57.042 40.909 0.00 0.00 0.00 5.54
4405 17188 2.218953 TAGCTGGTTTCTATTCGGCG 57.781 50.000 0.00 0.00 37.81 6.46
4406 17189 1.090052 AGCTGGTTTCTATTCGGCGC 61.090 55.000 0.00 0.00 37.81 6.53
4407 17190 2.014594 CTGGTTTCTATTCGGCGCC 58.985 57.895 19.07 19.07 0.00 6.53
4408 17191 0.462047 CTGGTTTCTATTCGGCGCCT 60.462 55.000 26.68 8.66 0.00 5.52
4409 17192 0.035820 TGGTTTCTATTCGGCGCCTT 60.036 50.000 26.68 11.84 0.00 4.35
4410 17193 1.207570 TGGTTTCTATTCGGCGCCTTA 59.792 47.619 26.68 12.75 0.00 2.69
4411 17194 2.158871 TGGTTTCTATTCGGCGCCTTAT 60.159 45.455 26.68 19.18 0.00 1.73
4412 17195 2.223377 GGTTTCTATTCGGCGCCTTATG 59.777 50.000 26.68 9.07 0.00 1.90
4413 17196 1.508632 TTCTATTCGGCGCCTTATGC 58.491 50.000 26.68 0.00 0.00 3.14
4424 17207 2.977405 GCCTTATGCGCCTGAATTAG 57.023 50.000 4.18 0.00 0.00 1.73
4437 17220 5.209818 CCTGAATTAGGCTTATCGGTACA 57.790 43.478 0.00 0.00 40.38 2.90
4438 17221 4.989168 CCTGAATTAGGCTTATCGGTACAC 59.011 45.833 0.00 0.00 40.38 2.90
4439 17222 4.613944 TGAATTAGGCTTATCGGTACACG 58.386 43.478 0.00 0.00 46.11 4.49
4440 17223 3.655276 ATTAGGCTTATCGGTACACGG 57.345 47.619 0.00 0.00 44.45 4.94
4441 17224 0.670162 TAGGCTTATCGGTACACGGC 59.330 55.000 0.00 0.00 44.45 5.68
4442 17225 1.947642 GGCTTATCGGTACACGGCG 60.948 63.158 4.80 4.80 44.45 6.46
4443 17226 2.583164 GCTTATCGGTACACGGCGC 61.583 63.158 6.90 0.00 44.45 6.53
4444 17227 1.226745 CTTATCGGTACACGGCGCA 60.227 57.895 10.83 0.00 44.45 6.09
4445 17228 1.477030 CTTATCGGTACACGGCGCAC 61.477 60.000 10.83 2.03 44.45 5.34
4446 17229 2.210341 TTATCGGTACACGGCGCACA 62.210 55.000 10.83 0.00 44.45 4.57
4447 17230 2.870667 TATCGGTACACGGCGCACAC 62.871 60.000 10.83 1.18 44.45 3.82
4456 17239 3.670377 GGCGCACACCCCTTTCAC 61.670 66.667 10.83 0.00 0.00 3.18
4457 17240 3.670377 GCGCACACCCCTTTCACC 61.670 66.667 0.30 0.00 0.00 4.02
4458 17241 2.113139 CGCACACCCCTTTCACCT 59.887 61.111 0.00 0.00 0.00 4.00
4459 17242 1.966451 CGCACACCCCTTTCACCTC 60.966 63.158 0.00 0.00 0.00 3.85
4460 17243 1.150536 GCACACCCCTTTCACCTCA 59.849 57.895 0.00 0.00 0.00 3.86
4461 17244 1.172812 GCACACCCCTTTCACCTCAC 61.173 60.000 0.00 0.00 0.00 3.51
4462 17245 0.474184 CACACCCCTTTCACCTCACT 59.526 55.000 0.00 0.00 0.00 3.41
4463 17246 0.474184 ACACCCCTTTCACCTCACTG 59.526 55.000 0.00 0.00 0.00 3.66
4464 17247 0.250901 CACCCCTTTCACCTCACTGG 60.251 60.000 0.00 0.00 42.93 4.00
4465 17248 1.380302 CCCCTTTCACCTCACTGGG 59.620 63.158 0.00 0.00 41.11 4.45
4466 17249 1.303643 CCCTTTCACCTCACTGGGC 60.304 63.158 0.00 0.00 41.11 5.36
4467 17250 1.303643 CCTTTCACCTCACTGGGCC 60.304 63.158 0.00 0.00 41.11 5.80
4468 17251 1.672356 CTTTCACCTCACTGGGCCG 60.672 63.158 0.00 0.00 41.11 6.13
4469 17252 3.190738 TTTCACCTCACTGGGCCGG 62.191 63.158 11.83 11.83 41.11 6.13
4481 17264 2.043953 GGCCGGCCCATCTTCTTT 60.044 61.111 36.64 0.00 0.00 2.52
4482 17265 1.682344 GGCCGGCCCATCTTCTTTT 60.682 57.895 36.64 0.00 0.00 2.27
4483 17266 1.257750 GGCCGGCCCATCTTCTTTTT 61.258 55.000 36.64 0.00 0.00 1.94
4484 17267 0.173481 GCCGGCCCATCTTCTTTTTC 59.827 55.000 18.11 0.00 0.00 2.29
4485 17268 0.817654 CCGGCCCATCTTCTTTTTCC 59.182 55.000 0.00 0.00 0.00 3.13
4486 17269 1.616994 CCGGCCCATCTTCTTTTTCCT 60.617 52.381 0.00 0.00 0.00 3.36
4487 17270 2.356741 CCGGCCCATCTTCTTTTTCCTA 60.357 50.000 0.00 0.00 0.00 2.94
4488 17271 3.352648 CGGCCCATCTTCTTTTTCCTAA 58.647 45.455 0.00 0.00 0.00 2.69
4489 17272 3.378427 CGGCCCATCTTCTTTTTCCTAAG 59.622 47.826 0.00 0.00 0.00 2.18
4490 17273 3.131223 GGCCCATCTTCTTTTTCCTAAGC 59.869 47.826 0.00 0.00 0.00 3.09
4491 17274 3.181496 GCCCATCTTCTTTTTCCTAAGCG 60.181 47.826 0.00 0.00 0.00 4.68
4492 17275 3.181496 CCCATCTTCTTTTTCCTAAGCGC 60.181 47.826 0.00 0.00 0.00 5.92
4493 17276 3.691609 CCATCTTCTTTTTCCTAAGCGCT 59.308 43.478 2.64 2.64 0.00 5.92
4494 17277 4.876107 CCATCTTCTTTTTCCTAAGCGCTA 59.124 41.667 12.05 0.00 0.00 4.26
4495 17278 5.354234 CCATCTTCTTTTTCCTAAGCGCTAA 59.646 40.000 12.05 0.00 0.00 3.09
4496 17279 6.128007 CCATCTTCTTTTTCCTAAGCGCTAAA 60.128 38.462 12.05 4.30 0.00 1.85
4497 17280 6.870971 TCTTCTTTTTCCTAAGCGCTAAAA 57.129 33.333 12.05 11.32 0.00 1.52
4498 17281 7.266922 TCTTCTTTTTCCTAAGCGCTAAAAA 57.733 32.000 21.18 21.18 31.87 1.94
4514 17297 1.826385 AAAAATGAGTCCCGGCAGAG 58.174 50.000 0.00 0.00 0.00 3.35
4515 17298 0.035056 AAAATGAGTCCCGGCAGAGG 60.035 55.000 0.00 0.00 0.00 3.69
4516 17299 0.909610 AAATGAGTCCCGGCAGAGGA 60.910 55.000 0.00 0.00 0.00 3.71
4517 17300 0.692419 AATGAGTCCCGGCAGAGGAT 60.692 55.000 0.00 0.00 35.38 3.24
4518 17301 0.692419 ATGAGTCCCGGCAGAGGATT 60.692 55.000 0.00 0.00 35.38 3.01
4519 17302 1.144936 GAGTCCCGGCAGAGGATTG 59.855 63.158 0.00 0.00 35.38 2.67
4520 17303 1.306141 AGTCCCGGCAGAGGATTGA 60.306 57.895 0.00 0.00 35.38 2.57
4521 17304 0.909610 AGTCCCGGCAGAGGATTGAA 60.910 55.000 0.00 0.00 35.38 2.69
4522 17305 0.744771 GTCCCGGCAGAGGATTGAAC 60.745 60.000 0.00 0.00 35.38 3.18
4523 17306 1.452108 CCCGGCAGAGGATTGAACC 60.452 63.158 0.00 0.00 0.00 3.62
4524 17307 1.604378 CCGGCAGAGGATTGAACCT 59.396 57.895 0.00 0.00 43.64 3.50
4525 17308 0.745845 CCGGCAGAGGATTGAACCTG 60.746 60.000 0.00 0.00 40.73 4.00
4527 17310 2.093216 GCAGAGGATTGAACCTGCG 58.907 57.895 0.00 0.00 41.86 5.18
4528 17311 0.674895 GCAGAGGATTGAACCTGCGT 60.675 55.000 0.00 0.00 41.86 5.24
4529 17312 1.363744 CAGAGGATTGAACCTGCGTC 58.636 55.000 0.00 0.00 40.73 5.19
4530 17313 0.250513 AGAGGATTGAACCTGCGTCC 59.749 55.000 0.00 0.00 40.73 4.79
4531 17314 0.250513 GAGGATTGAACCTGCGTCCT 59.749 55.000 0.00 0.00 41.81 3.85
4532 17315 0.250513 AGGATTGAACCTGCGTCCTC 59.749 55.000 0.00 0.00 39.01 3.71
4533 17316 0.744771 GGATTGAACCTGCGTCCTCC 60.745 60.000 0.00 0.00 0.00 4.30
4534 17317 0.744771 GATTGAACCTGCGTCCTCCC 60.745 60.000 0.00 0.00 0.00 4.30
4535 17318 1.201429 ATTGAACCTGCGTCCTCCCT 61.201 55.000 0.00 0.00 0.00 4.20
4536 17319 0.543410 TTGAACCTGCGTCCTCCCTA 60.543 55.000 0.00 0.00 0.00 3.53
4537 17320 0.325296 TGAACCTGCGTCCTCCCTAT 60.325 55.000 0.00 0.00 0.00 2.57
4538 17321 1.063492 TGAACCTGCGTCCTCCCTATA 60.063 52.381 0.00 0.00 0.00 1.31
4539 17322 1.614413 GAACCTGCGTCCTCCCTATAG 59.386 57.143 0.00 0.00 0.00 1.31
4540 17323 0.851469 ACCTGCGTCCTCCCTATAGA 59.149 55.000 0.00 0.00 0.00 1.98
4541 17324 1.202952 ACCTGCGTCCTCCCTATAGAG 60.203 57.143 0.00 0.00 0.00 2.43
4542 17325 0.885196 CTGCGTCCTCCCTATAGAGC 59.115 60.000 0.00 0.00 32.17 4.09
4543 17326 0.185175 TGCGTCCTCCCTATAGAGCA 59.815 55.000 0.00 0.00 32.17 4.26
4544 17327 1.329256 GCGTCCTCCCTATAGAGCAA 58.671 55.000 0.00 0.00 32.17 3.91
4545 17328 1.000052 GCGTCCTCCCTATAGAGCAAC 60.000 57.143 0.00 0.00 32.17 4.17
4546 17329 1.267261 CGTCCTCCCTATAGAGCAACG 59.733 57.143 0.00 1.24 36.14 4.10
4547 17330 1.000052 GTCCTCCCTATAGAGCAACGC 60.000 57.143 0.00 0.00 32.17 4.84
4548 17331 1.040646 CCTCCCTATAGAGCAACGCA 58.959 55.000 0.00 0.00 32.17 5.24
4549 17332 1.620819 CCTCCCTATAGAGCAACGCAT 59.379 52.381 0.00 0.00 32.17 4.73
4550 17333 2.353208 CCTCCCTATAGAGCAACGCATC 60.353 54.545 0.00 0.00 32.17 3.91
4551 17334 1.269723 TCCCTATAGAGCAACGCATCG 59.730 52.381 0.00 0.00 0.00 3.84
4552 17335 1.063806 CCTATAGAGCAACGCATCGC 58.936 55.000 0.00 0.00 0.00 4.58
4553 17336 1.336332 CCTATAGAGCAACGCATCGCT 60.336 52.381 0.00 0.00 42.42 4.93
4554 17337 2.095212 CCTATAGAGCAACGCATCGCTA 60.095 50.000 0.00 0.00 38.99 4.26
4555 17338 2.509052 ATAGAGCAACGCATCGCTAA 57.491 45.000 0.00 0.00 38.99 3.09
4556 17339 1.556564 TAGAGCAACGCATCGCTAAC 58.443 50.000 0.00 0.00 38.99 2.34
4557 17340 1.084370 AGAGCAACGCATCGCTAACC 61.084 55.000 0.00 0.00 38.99 2.85
4558 17341 1.358725 GAGCAACGCATCGCTAACCA 61.359 55.000 0.00 0.00 38.99 3.67
4559 17342 0.744414 AGCAACGCATCGCTAACCAT 60.744 50.000 0.00 0.00 36.50 3.55
4560 17343 0.098728 GCAACGCATCGCTAACCATT 59.901 50.000 0.00 0.00 0.00 3.16
4561 17344 1.329292 GCAACGCATCGCTAACCATTA 59.671 47.619 0.00 0.00 0.00 1.90
4562 17345 2.849502 GCAACGCATCGCTAACCATTAC 60.850 50.000 0.00 0.00 0.00 1.89
4563 17346 1.578583 ACGCATCGCTAACCATTACC 58.421 50.000 0.00 0.00 0.00 2.85
4564 17347 0.865769 CGCATCGCTAACCATTACCC 59.134 55.000 0.00 0.00 0.00 3.69
4565 17348 1.540363 CGCATCGCTAACCATTACCCT 60.540 52.381 0.00 0.00 0.00 4.34
4566 17349 2.288579 CGCATCGCTAACCATTACCCTA 60.289 50.000 0.00 0.00 0.00 3.53
4567 17350 3.735591 GCATCGCTAACCATTACCCTAA 58.264 45.455 0.00 0.00 0.00 2.69
4568 17351 3.497262 GCATCGCTAACCATTACCCTAAC 59.503 47.826 0.00 0.00 0.00 2.34
4569 17352 4.742743 GCATCGCTAACCATTACCCTAACT 60.743 45.833 0.00 0.00 0.00 2.24
4570 17353 5.365619 CATCGCTAACCATTACCCTAACTT 58.634 41.667 0.00 0.00 0.00 2.66
4571 17354 4.761975 TCGCTAACCATTACCCTAACTTG 58.238 43.478 0.00 0.00 0.00 3.16
4572 17355 3.311596 CGCTAACCATTACCCTAACTTGC 59.688 47.826 0.00 0.00 0.00 4.01
4573 17356 4.524053 GCTAACCATTACCCTAACTTGCT 58.476 43.478 0.00 0.00 0.00 3.91
4574 17357 4.335594 GCTAACCATTACCCTAACTTGCTG 59.664 45.833 0.00 0.00 0.00 4.41
4575 17358 4.650972 AACCATTACCCTAACTTGCTGA 57.349 40.909 0.00 0.00 0.00 4.26
4576 17359 4.862641 ACCATTACCCTAACTTGCTGAT 57.137 40.909 0.00 0.00 0.00 2.90
4577 17360 4.781934 ACCATTACCCTAACTTGCTGATC 58.218 43.478 0.00 0.00 0.00 2.92
4578 17361 4.475016 ACCATTACCCTAACTTGCTGATCT 59.525 41.667 0.00 0.00 0.00 2.75
4579 17362 4.818546 CCATTACCCTAACTTGCTGATCTG 59.181 45.833 0.00 0.00 0.00 2.90
4580 17363 5.431765 CATTACCCTAACTTGCTGATCTGT 58.568 41.667 1.27 0.00 0.00 3.41
4581 17364 3.340814 ACCCTAACTTGCTGATCTGTG 57.659 47.619 1.27 0.00 0.00 3.66
4582 17365 2.906389 ACCCTAACTTGCTGATCTGTGA 59.094 45.455 1.27 0.00 0.00 3.58
4583 17366 3.265791 CCCTAACTTGCTGATCTGTGAC 58.734 50.000 1.27 0.00 0.00 3.67
4584 17367 3.055530 CCCTAACTTGCTGATCTGTGACT 60.056 47.826 1.27 0.00 0.00 3.41
4585 17368 4.564406 CCCTAACTTGCTGATCTGTGACTT 60.564 45.833 1.27 0.00 0.00 3.01
4586 17369 5.337571 CCCTAACTTGCTGATCTGTGACTTA 60.338 44.000 1.27 0.00 0.00 2.24
4587 17370 5.578727 CCTAACTTGCTGATCTGTGACTTAC 59.421 44.000 1.27 0.00 0.00 2.34
4588 17371 3.931578 ACTTGCTGATCTGTGACTTACC 58.068 45.455 1.27 0.00 0.00 2.85
4589 17372 3.324846 ACTTGCTGATCTGTGACTTACCA 59.675 43.478 1.27 0.00 0.00 3.25
4590 17373 4.019860 ACTTGCTGATCTGTGACTTACCAT 60.020 41.667 1.27 0.00 0.00 3.55
4591 17374 4.128925 TGCTGATCTGTGACTTACCATC 57.871 45.455 1.27 0.00 0.00 3.51
4592 17375 3.771479 TGCTGATCTGTGACTTACCATCT 59.229 43.478 1.27 0.00 0.00 2.90
4593 17376 4.223700 TGCTGATCTGTGACTTACCATCTT 59.776 41.667 1.27 0.00 0.00 2.40
4594 17377 5.181748 GCTGATCTGTGACTTACCATCTTT 58.818 41.667 1.27 0.00 0.00 2.52
4595 17378 5.645497 GCTGATCTGTGACTTACCATCTTTT 59.355 40.000 1.27 0.00 0.00 2.27
4596 17379 6.150140 GCTGATCTGTGACTTACCATCTTTTT 59.850 38.462 1.27 0.00 0.00 1.94
4597 17380 7.625185 GCTGATCTGTGACTTACCATCTTTTTC 60.625 40.741 1.27 0.00 0.00 2.29
4598 17381 7.223584 TGATCTGTGACTTACCATCTTTTTCA 58.776 34.615 0.00 0.00 0.00 2.69
4599 17382 7.884877 TGATCTGTGACTTACCATCTTTTTCAT 59.115 33.333 0.00 0.00 0.00 2.57
4600 17383 7.672983 TCTGTGACTTACCATCTTTTTCATC 57.327 36.000 0.00 0.00 0.00 2.92
4601 17384 7.453393 TCTGTGACTTACCATCTTTTTCATCT 58.547 34.615 0.00 0.00 0.00 2.90
4602 17385 8.593679 TCTGTGACTTACCATCTTTTTCATCTA 58.406 33.333 0.00 0.00 0.00 1.98
4603 17386 9.388506 CTGTGACTTACCATCTTTTTCATCTAT 57.611 33.333 0.00 0.00 0.00 1.98
4604 17387 9.739276 TGTGACTTACCATCTTTTTCATCTATT 57.261 29.630 0.00 0.00 0.00 1.73
4636 17419 9.078990 TCTATTCTTTCCTCTTTTCCTTTTTCC 57.921 33.333 0.00 0.00 0.00 3.13
4637 17420 7.921041 ATTCTTTCCTCTTTTCCTTTTTCCT 57.079 32.000 0.00 0.00 0.00 3.36
4638 17421 7.733773 TTCTTTCCTCTTTTCCTTTTTCCTT 57.266 32.000 0.00 0.00 0.00 3.36
4639 17422 7.733773 TCTTTCCTCTTTTCCTTTTTCCTTT 57.266 32.000 0.00 0.00 0.00 3.11
4640 17423 8.832458 TCTTTCCTCTTTTCCTTTTTCCTTTA 57.168 30.769 0.00 0.00 0.00 1.85
4641 17424 9.434275 TCTTTCCTCTTTTCCTTTTTCCTTTAT 57.566 29.630 0.00 0.00 0.00 1.40
4642 17425 9.698309 CTTTCCTCTTTTCCTTTTTCCTTTATC 57.302 33.333 0.00 0.00 0.00 1.75
4643 17426 9.434275 TTTCCTCTTTTCCTTTTTCCTTTATCT 57.566 29.630 0.00 0.00 0.00 1.98
4644 17427 9.434275 TTCCTCTTTTCCTTTTTCCTTTATCTT 57.566 29.630 0.00 0.00 0.00 2.40
4645 17428 9.434275 TCCTCTTTTCCTTTTTCCTTTATCTTT 57.566 29.630 0.00 0.00 0.00 2.52
4652 17435 7.882179 TCCTTTTTCCTTTATCTTTTTCTCCG 58.118 34.615 0.00 0.00 0.00 4.63
4653 17436 7.504574 TCCTTTTTCCTTTATCTTTTTCTCCGT 59.495 33.333 0.00 0.00 0.00 4.69
4654 17437 7.808381 CCTTTTTCCTTTATCTTTTTCTCCGTC 59.192 37.037 0.00 0.00 0.00 4.79
4655 17438 8.459911 TTTTTCCTTTATCTTTTTCTCCGTCT 57.540 30.769 0.00 0.00 0.00 4.18
4656 17439 8.459911 TTTTCCTTTATCTTTTTCTCCGTCTT 57.540 30.769 0.00 0.00 0.00 3.01
4657 17440 8.459911 TTTCCTTTATCTTTTTCTCCGTCTTT 57.540 30.769 0.00 0.00 0.00 2.52
4658 17441 8.459911 TTCCTTTATCTTTTTCTCCGTCTTTT 57.540 30.769 0.00 0.00 0.00 2.27
4659 17442 8.095937 TCCTTTATCTTTTTCTCCGTCTTTTC 57.904 34.615 0.00 0.00 0.00 2.29
4660 17443 7.015877 CCTTTATCTTTTTCTCCGTCTTTTCG 58.984 38.462 0.00 0.00 0.00 3.46
4661 17444 7.307811 CCTTTATCTTTTTCTCCGTCTTTTCGT 60.308 37.037 0.00 0.00 0.00 3.85
4662 17445 7.486802 TTATCTTTTTCTCCGTCTTTTCGTT 57.513 32.000 0.00 0.00 0.00 3.85
4663 17446 5.806366 TCTTTTTCTCCGTCTTTTCGTTT 57.194 34.783 0.00 0.00 0.00 3.60
4664 17447 6.185852 TCTTTTTCTCCGTCTTTTCGTTTT 57.814 33.333 0.00 0.00 0.00 2.43
4665 17448 6.253013 TCTTTTTCTCCGTCTTTTCGTTTTC 58.747 36.000 0.00 0.00 0.00 2.29
4666 17449 4.541085 TTTCTCCGTCTTTTCGTTTTCC 57.459 40.909 0.00 0.00 0.00 3.13
4667 17450 3.464111 TCTCCGTCTTTTCGTTTTCCT 57.536 42.857 0.00 0.00 0.00 3.36
4668 17451 3.800531 TCTCCGTCTTTTCGTTTTCCTT 58.199 40.909 0.00 0.00 0.00 3.36
4669 17452 4.193865 TCTCCGTCTTTTCGTTTTCCTTT 58.806 39.130 0.00 0.00 0.00 3.11
4670 17453 4.637091 TCTCCGTCTTTTCGTTTTCCTTTT 59.363 37.500 0.00 0.00 0.00 2.27
4671 17454 5.124297 TCTCCGTCTTTTCGTTTTCCTTTTT 59.876 36.000 0.00 0.00 0.00 1.94
4696 17479 9.936759 TTTTTGTTCTTCCTAGTTTGATGTTTT 57.063 25.926 0.00 0.00 0.00 2.43
4697 17480 9.936759 TTTTGTTCTTCCTAGTTTGATGTTTTT 57.063 25.926 0.00 0.00 0.00 1.94
4698 17481 8.925161 TTGTTCTTCCTAGTTTGATGTTTTTG 57.075 30.769 0.00 0.00 0.00 2.44
4699 17482 6.978080 TGTTCTTCCTAGTTTGATGTTTTTGC 59.022 34.615 0.00 0.00 0.00 3.68
4700 17483 6.959639 TCTTCCTAGTTTGATGTTTTTGCT 57.040 33.333 0.00 0.00 0.00 3.91
4701 17484 7.346751 TCTTCCTAGTTTGATGTTTTTGCTT 57.653 32.000 0.00 0.00 0.00 3.91
4702 17485 7.202526 TCTTCCTAGTTTGATGTTTTTGCTTG 58.797 34.615 0.00 0.00 0.00 4.01
4703 17486 6.707440 TCCTAGTTTGATGTTTTTGCTTGA 57.293 33.333 0.00 0.00 0.00 3.02
4704 17487 7.106439 TCCTAGTTTGATGTTTTTGCTTGAA 57.894 32.000 0.00 0.00 0.00 2.69
4705 17488 7.551585 TCCTAGTTTGATGTTTTTGCTTGAAA 58.448 30.769 0.00 0.00 0.00 2.69
4706 17489 8.203485 TCCTAGTTTGATGTTTTTGCTTGAAAT 58.797 29.630 0.00 0.00 0.00 2.17
4707 17490 8.829612 CCTAGTTTGATGTTTTTGCTTGAAATT 58.170 29.630 0.00 0.00 0.00 1.82
4709 17492 8.898983 AGTTTGATGTTTTTGCTTGAAATTTG 57.101 26.923 0.00 0.00 0.00 2.32
4710 17493 8.513774 AGTTTGATGTTTTTGCTTGAAATTTGT 58.486 25.926 0.00 0.00 0.00 2.83
4711 17494 8.577110 GTTTGATGTTTTTGCTTGAAATTTGTG 58.423 29.630 0.00 0.00 0.00 3.33
4712 17495 7.606858 TGATGTTTTTGCTTGAAATTTGTGA 57.393 28.000 0.00 0.00 0.00 3.58
4713 17496 8.037382 TGATGTTTTTGCTTGAAATTTGTGAA 57.963 26.923 0.00 0.00 0.00 3.18
4714 17497 8.675504 TGATGTTTTTGCTTGAAATTTGTGAAT 58.324 25.926 0.00 0.00 0.00 2.57
4715 17498 9.505995 GATGTTTTTGCTTGAAATTTGTGAATT 57.494 25.926 0.00 0.00 37.06 2.17
4716 17499 9.857957 ATGTTTTTGCTTGAAATTTGTGAATTT 57.142 22.222 0.00 0.00 45.62 1.82
4717 17500 9.688592 TGTTTTTGCTTGAAATTTGTGAATTTT 57.311 22.222 0.00 0.00 43.61 1.82
4748 17531 9.748708 AATCAATGAACTCTTTTTCAAATTCGA 57.251 25.926 0.00 0.00 38.95 3.71
4749 17532 9.918630 ATCAATGAACTCTTTTTCAAATTCGAT 57.081 25.926 0.00 0.00 38.95 3.59
4750 17533 9.184062 TCAATGAACTCTTTTTCAAATTCGATG 57.816 29.630 0.00 0.00 38.95 3.84
4751 17534 9.184062 CAATGAACTCTTTTTCAAATTCGATGA 57.816 29.630 0.00 0.00 38.95 2.92
4752 17535 9.748708 AATGAACTCTTTTTCAAATTCGATGAA 57.251 25.926 0.00 0.00 38.95 2.57
4753 17536 8.560576 TGAACTCTTTTTCAAATTCGATGAAC 57.439 30.769 0.00 0.00 36.57 3.18
4754 17537 8.405531 TGAACTCTTTTTCAAATTCGATGAACT 58.594 29.630 0.00 0.00 36.57 3.01
4755 17538 9.878599 GAACTCTTTTTCAAATTCGATGAACTA 57.121 29.630 0.00 0.00 36.57 2.24
4762 17545 9.973450 TTTTCAAATTCGATGAACTATTTTCCA 57.027 25.926 0.00 0.00 36.57 3.53
4763 17546 9.973450 TTTCAAATTCGATGAACTATTTTCCAA 57.027 25.926 0.00 0.00 36.57 3.53
4764 17547 9.973450 TTCAAATTCGATGAACTATTTTCCAAA 57.027 25.926 0.00 0.00 32.10 3.28
4768 17551 8.841444 ATTCGATGAACTATTTTCCAAATTCG 57.159 30.769 0.00 0.00 0.00 3.34
4769 17552 7.603963 TCGATGAACTATTTTCCAAATTCGA 57.396 32.000 0.00 0.00 0.00 3.71
4770 17553 8.208718 TCGATGAACTATTTTCCAAATTCGAT 57.791 30.769 0.00 0.00 0.00 3.59
4771 17554 8.122330 TCGATGAACTATTTTCCAAATTCGATG 58.878 33.333 0.00 0.00 0.00 3.84
4772 17555 8.122330 CGATGAACTATTTTCCAAATTCGATGA 58.878 33.333 0.00 0.00 0.00 2.92
4773 17556 9.787532 GATGAACTATTTTCCAAATTCGATGAA 57.212 29.630 0.00 0.00 0.00 2.57
4774 17557 8.964420 TGAACTATTTTCCAAATTCGATGAAC 57.036 30.769 0.00 0.00 0.00 3.18
4775 17558 8.792633 TGAACTATTTTCCAAATTCGATGAACT 58.207 29.630 0.00 0.00 0.00 3.01
4776 17559 9.626045 GAACTATTTTCCAAATTCGATGAACTT 57.374 29.630 0.00 0.00 0.00 2.66
4777 17560 9.981114 AACTATTTTCCAAATTCGATGAACTTT 57.019 25.926 0.00 0.00 0.00 2.66
4778 17561 9.981114 ACTATTTTCCAAATTCGATGAACTTTT 57.019 25.926 0.00 0.00 0.00 2.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 9.287373 TGTTTAACTTAAATATCAACGGACCTT 57.713 29.630 0.00 0.00 0.00 3.50
29 30 8.724229 GTGTTTAACTTAAATATCAACGGACCT 58.276 33.333 0.00 0.00 0.00 3.85
30 31 8.505625 TGTGTTTAACTTAAATATCAACGGACC 58.494 33.333 0.00 0.00 0.00 4.46
31 32 9.881529 TTGTGTTTAACTTAAATATCAACGGAC 57.118 29.630 0.00 0.00 0.00 4.79
96 97 9.958180 TGATGGAAAATGTTTCTAGAGATGTTA 57.042 29.630 0.00 0.00 0.00 2.41
97 98 8.868522 TGATGGAAAATGTTTCTAGAGATGTT 57.131 30.769 0.00 0.00 0.00 2.71
98 99 8.868522 TTGATGGAAAATGTTTCTAGAGATGT 57.131 30.769 0.00 0.00 0.00 3.06
130 131 9.822185 GGGTAAAACCGGTTATTATCGATATAT 57.178 33.333 22.60 5.77 39.83 0.86
147 148 4.326504 TCGGAGAATATCGGGTAAAACC 57.673 45.455 0.00 0.00 37.60 3.27
148 149 5.007039 GGTTTCGGAGAATATCGGGTAAAAC 59.993 44.000 0.00 0.00 45.90 2.43
149 150 5.118286 GGTTTCGGAGAATATCGGGTAAAA 58.882 41.667 0.00 0.00 45.90 1.52
150 151 4.443315 GGGTTTCGGAGAATATCGGGTAAA 60.443 45.833 0.00 0.00 45.90 2.01
151 152 3.070015 GGGTTTCGGAGAATATCGGGTAA 59.930 47.826 0.00 0.00 45.90 2.85
152 153 2.629617 GGGTTTCGGAGAATATCGGGTA 59.370 50.000 0.00 0.00 45.90 3.69
153 154 1.415289 GGGTTTCGGAGAATATCGGGT 59.585 52.381 0.00 0.00 45.90 5.28
154 155 1.692519 AGGGTTTCGGAGAATATCGGG 59.307 52.381 0.00 0.00 45.90 5.14
155 156 3.470645 AAGGGTTTCGGAGAATATCGG 57.529 47.619 0.00 0.00 45.90 4.18
178 179 2.913777 GAAAGTATTTCGGTGCCACC 57.086 50.000 2.98 2.98 46.13 4.61
187 188 6.819146 AGTTTCTGAGGATCCGAAAGTATTTC 59.181 38.462 15.44 2.83 46.47 2.17
188 189 6.712276 AGTTTCTGAGGATCCGAAAGTATTT 58.288 36.000 15.44 0.00 46.47 1.40
189 190 6.301169 AGTTTCTGAGGATCCGAAAGTATT 57.699 37.500 15.44 0.00 46.47 1.89
190 191 5.941555 AGTTTCTGAGGATCCGAAAGTAT 57.058 39.130 15.44 4.17 46.47 2.12
192 193 5.941555 ATAGTTTCTGAGGATCCGAAAGT 57.058 39.130 18.96 18.96 46.47 2.66
193 194 6.818644 TCAAATAGTTTCTGAGGATCCGAAAG 59.181 38.462 12.09 8.77 46.47 2.62
194 195 6.707290 TCAAATAGTTTCTGAGGATCCGAAA 58.293 36.000 5.98 7.62 44.30 3.46
195 196 6.294361 TCAAATAGTTTCTGAGGATCCGAA 57.706 37.500 5.98 0.89 36.53 4.30
196 197 5.932619 TCAAATAGTTTCTGAGGATCCGA 57.067 39.130 5.98 0.00 0.00 4.55
197 198 6.985188 TTTCAAATAGTTTCTGAGGATCCG 57.015 37.500 5.98 0.00 0.00 4.18
227 228 9.868277 GGACAATATATTTGTGGAATTGTTTCA 57.132 29.630 0.00 0.00 40.02 2.69
228 229 9.313118 GGGACAATATATTTGTGGAATTGTTTC 57.687 33.333 0.00 1.78 40.02 2.78
229 230 8.264347 GGGGACAATATATTTGTGGAATTGTTT 58.736 33.333 0.00 0.00 40.02 2.83
230 231 7.401493 TGGGGACAATATATTTGTGGAATTGTT 59.599 33.333 0.00 0.00 40.02 2.83
231 232 6.900186 TGGGGACAATATATTTGTGGAATTGT 59.100 34.615 0.00 3.49 41.98 2.71
232 233 7.358770 TGGGGACAATATATTTGTGGAATTG 57.641 36.000 0.00 0.70 37.44 2.32
249 250 2.119611 TCTCTCCGCTTGGGGACA 59.880 61.111 2.10 0.00 37.32 4.02
250 251 2.579738 GTCTCTCCGCTTGGGGAC 59.420 66.667 2.10 0.00 37.32 4.46
251 252 3.068691 CGTCTCTCCGCTTGGGGA 61.069 66.667 6.27 6.27 41.12 4.81
252 253 3.068691 TCGTCTCTCCGCTTGGGG 61.069 66.667 0.00 0.00 36.01 4.96
253 254 2.344203 ACTCGTCTCTCCGCTTGGG 61.344 63.158 0.00 0.00 37.02 4.12
254 255 1.153939 CACTCGTCTCTCCGCTTGG 60.154 63.158 0.00 0.00 0.00 3.61
255 256 1.153939 CCACTCGTCTCTCCGCTTG 60.154 63.158 0.00 0.00 0.00 4.01
256 257 1.604023 ACCACTCGTCTCTCCGCTT 60.604 57.895 0.00 0.00 0.00 4.68
257 258 2.034376 ACCACTCGTCTCTCCGCT 59.966 61.111 0.00 0.00 0.00 5.52
258 259 1.863662 TTCACCACTCGTCTCTCCGC 61.864 60.000 0.00 0.00 0.00 5.54
259 260 0.811915 ATTCACCACTCGTCTCTCCG 59.188 55.000 0.00 0.00 0.00 4.63
260 261 3.320673 AAATTCACCACTCGTCTCTCC 57.679 47.619 0.00 0.00 0.00 3.71
261 262 5.927115 AGTAAAAATTCACCACTCGTCTCTC 59.073 40.000 0.00 0.00 0.00 3.20
262 263 5.855045 AGTAAAAATTCACCACTCGTCTCT 58.145 37.500 0.00 0.00 0.00 3.10
263 264 5.120363 GGAGTAAAAATTCACCACTCGTCTC 59.880 44.000 0.00 0.00 37.17 3.36
264 265 4.995487 GGAGTAAAAATTCACCACTCGTCT 59.005 41.667 0.00 0.00 37.17 4.18
265 266 4.143179 CGGAGTAAAAATTCACCACTCGTC 60.143 45.833 0.00 0.00 37.17 4.20
266 267 3.744426 CGGAGTAAAAATTCACCACTCGT 59.256 43.478 0.00 0.00 37.17 4.18
267 268 3.424433 GCGGAGTAAAAATTCACCACTCG 60.424 47.826 0.00 0.00 37.17 4.18
268 269 3.119955 GGCGGAGTAAAAATTCACCACTC 60.120 47.826 0.00 0.00 35.87 3.51
269 270 2.817844 GGCGGAGTAAAAATTCACCACT 59.182 45.455 0.00 0.00 0.00 4.00
270 271 2.094906 GGGCGGAGTAAAAATTCACCAC 60.095 50.000 0.00 0.00 0.00 4.16
271 272 2.164338 GGGCGGAGTAAAAATTCACCA 58.836 47.619 0.00 0.00 0.00 4.17
272 273 1.475280 GGGGCGGAGTAAAAATTCACC 59.525 52.381 0.00 0.00 0.00 4.02
273 274 2.164338 TGGGGCGGAGTAAAAATTCAC 58.836 47.619 0.00 0.00 0.00 3.18
274 275 2.588464 TGGGGCGGAGTAAAAATTCA 57.412 45.000 0.00 0.00 0.00 2.57
275 276 2.416836 GCTTGGGGCGGAGTAAAAATTC 60.417 50.000 0.00 0.00 0.00 2.17
276 277 1.548719 GCTTGGGGCGGAGTAAAAATT 59.451 47.619 0.00 0.00 0.00 1.82
277 278 1.182667 GCTTGGGGCGGAGTAAAAAT 58.817 50.000 0.00 0.00 0.00 1.82
278 279 2.648593 GCTTGGGGCGGAGTAAAAA 58.351 52.632 0.00 0.00 0.00 1.94
279 280 4.408378 GCTTGGGGCGGAGTAAAA 57.592 55.556 0.00 0.00 0.00 1.52
290 291 2.702592 TATTTACTCCACCGCTTGGG 57.297 50.000 1.62 0.00 46.92 4.12
292 293 3.739300 CCGTATATTTACTCCACCGCTTG 59.261 47.826 0.00 0.00 0.00 4.01
293 294 3.243975 CCCGTATATTTACTCCACCGCTT 60.244 47.826 0.00 0.00 0.00 4.68
294 295 2.298163 CCCGTATATTTACTCCACCGCT 59.702 50.000 0.00 0.00 0.00 5.52
295 296 2.680577 CCCGTATATTTACTCCACCGC 58.319 52.381 0.00 0.00 0.00 5.68
296 297 2.680577 GCCCGTATATTTACTCCACCG 58.319 52.381 0.00 0.00 0.00 4.94
297 298 2.611224 CCGCCCGTATATTTACTCCACC 60.611 54.545 0.00 0.00 0.00 4.61
298 299 2.611224 CCCGCCCGTATATTTACTCCAC 60.611 54.545 0.00 0.00 0.00 4.02
299 300 1.619827 CCCGCCCGTATATTTACTCCA 59.380 52.381 0.00 0.00 0.00 3.86
300 301 1.895131 TCCCGCCCGTATATTTACTCC 59.105 52.381 0.00 0.00 0.00 3.85
301 302 3.518590 CATCCCGCCCGTATATTTACTC 58.481 50.000 0.00 0.00 0.00 2.59
302 303 2.354403 GCATCCCGCCCGTATATTTACT 60.354 50.000 0.00 0.00 32.94 2.24
303 304 2.004733 GCATCCCGCCCGTATATTTAC 58.995 52.381 0.00 0.00 32.94 2.01
304 305 1.404449 CGCATCCCGCCCGTATATTTA 60.404 52.381 0.00 0.00 37.30 1.40
305 306 0.672401 CGCATCCCGCCCGTATATTT 60.672 55.000 0.00 0.00 37.30 1.40
306 307 1.079405 CGCATCCCGCCCGTATATT 60.079 57.895 0.00 0.00 37.30 1.28
307 308 2.280552 ACGCATCCCGCCCGTATAT 61.281 57.895 0.00 0.00 41.76 0.86
308 309 2.913578 ACGCATCCCGCCCGTATA 60.914 61.111 0.00 0.00 41.76 1.47
309 310 4.602259 CACGCATCCCGCCCGTAT 62.602 66.667 0.00 0.00 41.76 3.06
313 314 3.379865 TAAGACACGCATCCCGCCC 62.380 63.158 0.00 0.00 41.76 6.13
314 315 1.883084 CTAAGACACGCATCCCGCC 60.883 63.158 0.00 0.00 41.76 6.13
315 316 1.883084 CCTAAGACACGCATCCCGC 60.883 63.158 0.00 0.00 41.76 6.13
316 317 0.389391 ATCCTAAGACACGCATCCCG 59.611 55.000 0.00 0.00 44.21 5.14
317 318 3.746045 TTATCCTAAGACACGCATCCC 57.254 47.619 0.00 0.00 0.00 3.85
368 370 1.614413 CACCTCTAACCGGGATCTAGC 59.386 57.143 6.32 0.00 0.00 3.42
373 375 3.368739 CGTTTTACACCTCTAACCGGGAT 60.369 47.826 6.32 0.00 0.00 3.85
377 379 3.248266 CCTCGTTTTACACCTCTAACCG 58.752 50.000 0.00 0.00 0.00 4.44
396 398 3.906218 ACCGGTTAGAGGAGTAAAAACCT 59.094 43.478 0.00 0.00 37.93 3.50
403 405 3.956199 CCATACAACCGGTTAGAGGAGTA 59.044 47.826 21.79 16.75 0.00 2.59
420 422 3.751698 GGCATTTCTAACCGATCCCATAC 59.248 47.826 0.00 0.00 0.00 2.39
423 425 1.133915 GGGCATTTCTAACCGATCCCA 60.134 52.381 0.00 0.00 32.89 4.37
430 432 2.293399 CGGCAATAGGGCATTTCTAACC 59.707 50.000 0.00 0.00 43.60 2.85
431 433 2.949644 ACGGCAATAGGGCATTTCTAAC 59.050 45.455 0.00 0.00 43.60 2.34
747 764 2.620585 GCTAATGGAGCCCTGATGTTTC 59.379 50.000 0.00 0.00 46.41 2.78
748 765 2.659428 GCTAATGGAGCCCTGATGTTT 58.341 47.619 0.00 0.00 46.41 2.83
771 797 7.274250 GGTATGGATATGTTACGTATTTCGACC 59.726 40.741 0.00 2.32 42.86 4.79
780 806 6.929049 CAGTGATTGGTATGGATATGTTACGT 59.071 38.462 0.00 0.00 0.00 3.57
979 1015 6.263617 CCCATGAATAATGTGATGTGATGTGA 59.736 38.462 0.00 0.00 34.11 3.58
1443 1493 6.710597 AAATCTTACCGAGTCAGCTGTATA 57.289 37.500 14.67 0.00 0.00 1.47
1561 1914 6.715464 AGCTACGACAATTAATTTGAATCGG 58.285 36.000 18.02 8.24 37.85 4.18
1579 1932 9.258826 TGAGAGAGTACTTATACTAAAGCTACG 57.741 37.037 0.00 0.00 41.98 3.51
1690 2348 2.428890 CAGATGTGTCCTAGACAGACCC 59.571 54.545 0.00 0.00 43.57 4.46
1693 2351 3.739401 TCCAGATGTGTCCTAGACAGA 57.261 47.619 0.00 0.00 43.57 3.41
1711 2369 4.072131 ACAAACATAGTGGTGTCACATCC 58.928 43.478 5.12 0.00 45.91 3.51
1734 2394 4.587262 ACCTGGGACAAAAACAAATAGACC 59.413 41.667 0.00 0.00 38.70 3.85
1777 2437 7.497909 ACATCTAAACTCCCATAAATAACACGG 59.502 37.037 0.00 0.00 0.00 4.94
1778 2438 8.335356 CACATCTAAACTCCCATAAATAACACG 58.665 37.037 0.00 0.00 0.00 4.49
1935 2618 8.702438 GTTGTAGTCGCTGTTATTTGTAAACTA 58.298 33.333 0.00 0.00 0.00 2.24
2189 2872 2.281484 TTGCCGCACTCAAGGGTC 60.281 61.111 0.00 0.00 0.00 4.46
2451 3151 5.321959 TCAGAATTTTGCCGAAATATGCA 57.678 34.783 0.00 0.00 36.96 3.96
2479 3179 4.984785 TGGAGATTCTGCGAGAAATTATCG 59.015 41.667 5.58 5.58 37.82 2.92
2700 3447 1.201429 AGTGGAATCGCTTGGGACCT 61.201 55.000 0.00 0.00 0.00 3.85
2742 3489 2.971660 TGTCGTTGGAGAAGTTGTCA 57.028 45.000 2.06 0.00 0.00 3.58
3013 3760 1.209127 GCACAACGTTATTGGCGCT 59.791 52.632 7.64 0.00 0.00 5.92
3072 3849 2.743664 CCTAAGGCCAAAAGCAATTTGC 59.256 45.455 13.55 13.55 45.79 3.68
3198 4061 1.284491 TGGCTTGATGTCCCTATGCAA 59.716 47.619 0.00 0.00 0.00 4.08
3298 4161 0.529833 AGGAGCTGTCGTCAGTGATG 59.470 55.000 11.28 5.96 43.05 3.07
3395 4258 2.599281 TCAAGGAGGACGACGCCA 60.599 61.111 10.28 0.00 42.23 5.69
3431 4294 1.831652 GCTGAGCTACCACCACAGGT 61.832 60.000 0.00 0.00 45.72 4.00
3461 4327 2.032376 TGAGCCAAGTGCATCGCA 59.968 55.556 0.00 0.00 44.83 5.10
3500 4366 0.832135 CGCCTAGAATCCTGCCCCTA 60.832 60.000 0.00 0.00 0.00 3.53
3506 4372 2.663188 GCGGCGCCTAGAATCCTG 60.663 66.667 26.68 6.32 0.00 3.86
3737 4977 1.453148 CCGACGGTTACAAACGAAGAC 59.547 52.381 5.48 0.00 0.00 3.01
3879 5122 4.766891 ACGGGAAATGAATGACACTGATTT 59.233 37.500 0.00 0.00 0.00 2.17
3881 5124 3.941483 GACGGGAAATGAATGACACTGAT 59.059 43.478 0.00 0.00 0.00 2.90
3980 5225 2.229792 CACACACAAGCACACCCTATT 58.770 47.619 0.00 0.00 0.00 1.73
3984 5229 0.100503 GAACACACACAAGCACACCC 59.899 55.000 0.00 0.00 0.00 4.61
4020 5265 3.267483 GCAAGGGTTCATACATACACGT 58.733 45.455 0.00 0.00 0.00 4.49
4072 5317 3.808984 GGGGGAGATGAATGACACC 57.191 57.895 0.00 0.00 0.00 4.16
4180 5429 1.303317 CCCATATTGGCCGCCTACC 60.303 63.158 11.61 0.00 35.79 3.18
4199 5448 3.368220 GCACATATCCACATGCACCAAAA 60.368 43.478 0.00 0.00 38.00 2.44
4294 5543 5.012458 CCCATGTCACATCATATCAGGTACT 59.988 44.000 0.00 0.00 43.88 2.73
4333 15351 2.593026 GTGGGACAAAAGAATGTGGGA 58.407 47.619 0.00 0.00 44.16 4.37
4388 17171 1.352056 GCGCCGAATAGAAACCAGC 59.648 57.895 0.00 0.00 0.00 4.85
4389 17172 0.462047 AGGCGCCGAATAGAAACCAG 60.462 55.000 23.20 0.00 0.00 4.00
4390 17173 0.035820 AAGGCGCCGAATAGAAACCA 60.036 50.000 23.20 0.00 0.00 3.67
4391 17174 1.944032 TAAGGCGCCGAATAGAAACC 58.056 50.000 23.20 0.00 0.00 3.27
4392 17175 2.349532 GCATAAGGCGCCGAATAGAAAC 60.350 50.000 23.20 1.71 0.00 2.78
4393 17176 1.871039 GCATAAGGCGCCGAATAGAAA 59.129 47.619 23.20 1.45 0.00 2.52
4394 17177 1.508632 GCATAAGGCGCCGAATAGAA 58.491 50.000 23.20 2.63 0.00 2.10
4395 17178 3.210857 GCATAAGGCGCCGAATAGA 57.789 52.632 23.20 3.96 0.00 1.98
4405 17188 1.537202 CCTAATTCAGGCGCATAAGGC 59.463 52.381 10.83 0.00 37.70 4.35
4415 17198 6.298562 CGTGTACCGATAAGCCTAATTCAGG 61.299 48.000 0.00 0.00 43.17 3.86
4416 17199 4.680110 CGTGTACCGATAAGCCTAATTCAG 59.320 45.833 0.00 0.00 39.56 3.02
4417 17200 4.500205 CCGTGTACCGATAAGCCTAATTCA 60.500 45.833 5.46 0.00 39.56 2.57
4418 17201 3.985925 CCGTGTACCGATAAGCCTAATTC 59.014 47.826 5.46 0.00 39.56 2.17
4419 17202 3.801293 GCCGTGTACCGATAAGCCTAATT 60.801 47.826 5.46 0.00 39.56 1.40
4420 17203 2.288640 GCCGTGTACCGATAAGCCTAAT 60.289 50.000 5.46 0.00 39.56 1.73
4421 17204 1.067516 GCCGTGTACCGATAAGCCTAA 59.932 52.381 5.46 0.00 39.56 2.69
4422 17205 0.670162 GCCGTGTACCGATAAGCCTA 59.330 55.000 5.46 0.00 39.56 3.93
4423 17206 1.440476 GCCGTGTACCGATAAGCCT 59.560 57.895 5.46 0.00 39.56 4.58
4424 17207 1.947642 CGCCGTGTACCGATAAGCC 60.948 63.158 5.46 0.00 39.56 4.35
4425 17208 2.583164 GCGCCGTGTACCGATAAGC 61.583 63.158 0.00 0.55 39.56 3.09
4426 17209 1.226745 TGCGCCGTGTACCGATAAG 60.227 57.895 4.18 0.00 39.56 1.73
4427 17210 1.516821 GTGCGCCGTGTACCGATAA 60.517 57.895 4.18 0.00 39.56 1.75
4428 17211 2.102749 GTGCGCCGTGTACCGATA 59.897 61.111 4.18 0.00 39.56 2.92
4429 17212 4.058732 TGTGCGCCGTGTACCGAT 62.059 61.111 4.18 0.00 39.56 4.18
4439 17222 3.670377 GTGAAAGGGGTGTGCGCC 61.670 66.667 4.18 0.00 46.91 6.53
4440 17223 3.670377 GGTGAAAGGGGTGTGCGC 61.670 66.667 0.00 0.00 0.00 6.09
4441 17224 1.966451 GAGGTGAAAGGGGTGTGCG 60.966 63.158 0.00 0.00 0.00 5.34
4442 17225 1.150536 TGAGGTGAAAGGGGTGTGC 59.849 57.895 0.00 0.00 0.00 4.57
4443 17226 0.474184 AGTGAGGTGAAAGGGGTGTG 59.526 55.000 0.00 0.00 0.00 3.82
4444 17227 0.474184 CAGTGAGGTGAAAGGGGTGT 59.526 55.000 0.00 0.00 0.00 4.16
4445 17228 0.250901 CCAGTGAGGTGAAAGGGGTG 60.251 60.000 0.00 0.00 0.00 4.61
4446 17229 1.427072 CCCAGTGAGGTGAAAGGGGT 61.427 60.000 0.00 0.00 34.66 4.95
4447 17230 1.380302 CCCAGTGAGGTGAAAGGGG 59.620 63.158 0.00 0.00 34.66 4.79
4448 17231 1.303643 GCCCAGTGAGGTGAAAGGG 60.304 63.158 0.00 0.00 39.33 3.95
4449 17232 1.303643 GGCCCAGTGAGGTGAAAGG 60.304 63.158 0.00 0.00 34.66 3.11
4450 17233 1.672356 CGGCCCAGTGAGGTGAAAG 60.672 63.158 0.00 0.00 34.66 2.62
4451 17234 2.429930 CGGCCCAGTGAGGTGAAA 59.570 61.111 0.00 0.00 34.66 2.69
4452 17235 3.636231 CCGGCCCAGTGAGGTGAA 61.636 66.667 0.00 0.00 34.66 3.18
4464 17247 1.257750 AAAAAGAAGATGGGCCGGCC 61.258 55.000 38.57 38.57 0.00 6.13
4465 17248 0.173481 GAAAAAGAAGATGGGCCGGC 59.827 55.000 21.18 21.18 0.00 6.13
4466 17249 0.817654 GGAAAAAGAAGATGGGCCGG 59.182 55.000 0.00 0.00 0.00 6.13
4467 17250 1.839424 AGGAAAAAGAAGATGGGCCG 58.161 50.000 0.00 0.00 0.00 6.13
4468 17251 3.131223 GCTTAGGAAAAAGAAGATGGGCC 59.869 47.826 0.00 0.00 0.00 5.80
4469 17252 3.181496 CGCTTAGGAAAAAGAAGATGGGC 60.181 47.826 0.00 0.00 0.00 5.36
4470 17253 3.181496 GCGCTTAGGAAAAAGAAGATGGG 60.181 47.826 0.00 0.00 0.00 4.00
4471 17254 3.691609 AGCGCTTAGGAAAAAGAAGATGG 59.308 43.478 2.64 0.00 0.00 3.51
4472 17255 4.954092 AGCGCTTAGGAAAAAGAAGATG 57.046 40.909 2.64 0.00 0.00 2.90
4473 17256 7.448748 TTTTAGCGCTTAGGAAAAAGAAGAT 57.551 32.000 18.68 0.00 0.00 2.40
4474 17257 6.870971 TTTTAGCGCTTAGGAAAAAGAAGA 57.129 33.333 18.68 0.00 0.00 2.87
4495 17278 1.614317 CCTCTGCCGGGACTCATTTTT 60.614 52.381 2.18 0.00 0.00 1.94
4496 17279 0.035056 CCTCTGCCGGGACTCATTTT 60.035 55.000 2.18 0.00 0.00 1.82
4497 17280 0.909610 TCCTCTGCCGGGACTCATTT 60.910 55.000 2.18 0.00 0.00 2.32
4498 17281 0.692419 ATCCTCTGCCGGGACTCATT 60.692 55.000 2.18 0.00 35.51 2.57
4499 17282 0.692419 AATCCTCTGCCGGGACTCAT 60.692 55.000 2.18 0.00 35.51 2.90
4500 17283 1.306141 AATCCTCTGCCGGGACTCA 60.306 57.895 2.18 0.00 35.51 3.41
4501 17284 1.144936 CAATCCTCTGCCGGGACTC 59.855 63.158 2.18 0.00 35.51 3.36
4502 17285 0.909610 TTCAATCCTCTGCCGGGACT 60.910 55.000 2.18 0.00 35.51 3.85
4503 17286 0.744771 GTTCAATCCTCTGCCGGGAC 60.745 60.000 2.18 0.00 35.51 4.46
4504 17287 1.602237 GTTCAATCCTCTGCCGGGA 59.398 57.895 2.18 0.00 37.26 5.14
4505 17288 1.452108 GGTTCAATCCTCTGCCGGG 60.452 63.158 2.18 0.00 0.00 5.73
4506 17289 0.745845 CAGGTTCAATCCTCTGCCGG 60.746 60.000 0.00 0.00 35.37 6.13
4507 17290 1.372087 GCAGGTTCAATCCTCTGCCG 61.372 60.000 0.00 0.00 44.70 5.69
4508 17291 1.372087 CGCAGGTTCAATCCTCTGCC 61.372 60.000 8.32 0.00 46.88 4.85
4509 17292 0.674895 ACGCAGGTTCAATCCTCTGC 60.675 55.000 0.00 0.00 46.32 4.26
4510 17293 1.363744 GACGCAGGTTCAATCCTCTG 58.636 55.000 0.00 0.00 35.37 3.35
4511 17294 0.250513 GGACGCAGGTTCAATCCTCT 59.749 55.000 0.00 0.00 35.37 3.69
4512 17295 0.250513 AGGACGCAGGTTCAATCCTC 59.749 55.000 0.00 0.00 34.61 3.71
4513 17296 0.250513 GAGGACGCAGGTTCAATCCT 59.749 55.000 0.00 0.00 42.62 3.24
4514 17297 0.744771 GGAGGACGCAGGTTCAATCC 60.745 60.000 0.00 0.00 0.00 3.01
4515 17298 0.744771 GGGAGGACGCAGGTTCAATC 60.745 60.000 0.00 0.00 0.00 2.67
4516 17299 1.201429 AGGGAGGACGCAGGTTCAAT 61.201 55.000 0.00 0.00 0.00 2.57
4517 17300 0.543410 TAGGGAGGACGCAGGTTCAA 60.543 55.000 0.00 0.00 0.00 2.69
4518 17301 0.325296 ATAGGGAGGACGCAGGTTCA 60.325 55.000 0.00 0.00 0.00 3.18
4519 17302 1.614413 CTATAGGGAGGACGCAGGTTC 59.386 57.143 0.00 0.00 0.00 3.62
4520 17303 1.217183 TCTATAGGGAGGACGCAGGTT 59.783 52.381 0.00 0.00 0.00 3.50
4521 17304 0.851469 TCTATAGGGAGGACGCAGGT 59.149 55.000 0.00 0.00 0.00 4.00
4522 17305 1.540267 CTCTATAGGGAGGACGCAGG 58.460 60.000 0.00 0.00 0.00 4.85
4523 17306 0.885196 GCTCTATAGGGAGGACGCAG 59.115 60.000 2.98 0.00 34.21 5.18
4524 17307 0.185175 TGCTCTATAGGGAGGACGCA 59.815 55.000 2.98 0.00 34.21 5.24
4525 17308 1.000052 GTTGCTCTATAGGGAGGACGC 60.000 57.143 2.98 0.00 33.58 5.19
4526 17309 1.267261 CGTTGCTCTATAGGGAGGACG 59.733 57.143 2.98 6.16 33.58 4.79
4527 17310 1.000052 GCGTTGCTCTATAGGGAGGAC 60.000 57.143 2.98 0.00 33.58 3.85
4528 17311 1.329256 GCGTTGCTCTATAGGGAGGA 58.671 55.000 2.98 0.00 34.21 3.71
4529 17312 1.040646 TGCGTTGCTCTATAGGGAGG 58.959 55.000 2.98 0.00 34.21 4.30
4530 17313 2.669670 CGATGCGTTGCTCTATAGGGAG 60.670 54.545 2.98 0.00 36.50 4.30
4531 17314 1.269723 CGATGCGTTGCTCTATAGGGA 59.730 52.381 2.98 0.00 0.00 4.20
4532 17315 1.702886 CGATGCGTTGCTCTATAGGG 58.297 55.000 0.00 0.00 0.00 3.53
4533 17316 1.063806 GCGATGCGTTGCTCTATAGG 58.936 55.000 11.13 0.00 0.00 2.57
4534 17317 2.057503 AGCGATGCGTTGCTCTATAG 57.942 50.000 15.31 0.00 41.34 1.31
4535 17318 3.305964 GTTAGCGATGCGTTGCTCTATA 58.694 45.455 24.13 3.98 44.10 1.31
4536 17319 2.128035 GTTAGCGATGCGTTGCTCTAT 58.872 47.619 24.13 3.32 44.10 1.98
4537 17320 1.556564 GTTAGCGATGCGTTGCTCTA 58.443 50.000 24.13 11.00 44.10 2.43
4538 17321 1.084370 GGTTAGCGATGCGTTGCTCT 61.084 55.000 24.13 4.48 44.10 4.09
4539 17322 1.348594 GGTTAGCGATGCGTTGCTC 59.651 57.895 24.13 10.88 44.10 4.26
4540 17323 0.744414 ATGGTTAGCGATGCGTTGCT 60.744 50.000 23.90 23.90 46.81 3.91
4541 17324 0.098728 AATGGTTAGCGATGCGTTGC 59.901 50.000 10.40 10.40 34.77 4.17
4542 17325 2.286184 GGTAATGGTTAGCGATGCGTTG 60.286 50.000 0.00 0.00 0.00 4.10
4543 17326 1.937899 GGTAATGGTTAGCGATGCGTT 59.062 47.619 0.00 0.00 0.00 4.84
4544 17327 1.578583 GGTAATGGTTAGCGATGCGT 58.421 50.000 0.00 0.00 0.00 5.24
4545 17328 0.865769 GGGTAATGGTTAGCGATGCG 59.134 55.000 0.00 0.00 34.56 4.73
4546 17329 2.256117 AGGGTAATGGTTAGCGATGC 57.744 50.000 0.00 0.00 34.56 3.91
4547 17330 4.957296 AGTTAGGGTAATGGTTAGCGATG 58.043 43.478 0.00 0.00 34.56 3.84
4548 17331 5.365619 CAAGTTAGGGTAATGGTTAGCGAT 58.634 41.667 0.00 0.00 34.56 4.58
4549 17332 4.761975 CAAGTTAGGGTAATGGTTAGCGA 58.238 43.478 0.00 0.00 34.56 4.93
4550 17333 3.311596 GCAAGTTAGGGTAATGGTTAGCG 59.688 47.826 0.00 0.00 34.56 4.26
4551 17334 4.335594 CAGCAAGTTAGGGTAATGGTTAGC 59.664 45.833 0.00 0.00 0.00 3.09
4552 17335 5.741011 TCAGCAAGTTAGGGTAATGGTTAG 58.259 41.667 0.00 0.00 0.00 2.34
4553 17336 5.765576 TCAGCAAGTTAGGGTAATGGTTA 57.234 39.130 0.00 0.00 0.00 2.85
4554 17337 4.650972 TCAGCAAGTTAGGGTAATGGTT 57.349 40.909 0.00 0.00 0.00 3.67
4555 17338 4.475016 AGATCAGCAAGTTAGGGTAATGGT 59.525 41.667 0.00 0.00 0.00 3.55
4556 17339 4.818546 CAGATCAGCAAGTTAGGGTAATGG 59.181 45.833 0.00 0.00 0.00 3.16
4557 17340 5.295292 CACAGATCAGCAAGTTAGGGTAATG 59.705 44.000 0.00 0.00 0.00 1.90
4558 17341 5.189736 TCACAGATCAGCAAGTTAGGGTAAT 59.810 40.000 0.00 0.00 0.00 1.89
4559 17342 4.530553 TCACAGATCAGCAAGTTAGGGTAA 59.469 41.667 0.00 0.00 0.00 2.85
4560 17343 4.081642 GTCACAGATCAGCAAGTTAGGGTA 60.082 45.833 0.00 0.00 0.00 3.69
4561 17344 2.906389 TCACAGATCAGCAAGTTAGGGT 59.094 45.455 0.00 0.00 0.00 4.34
4562 17345 3.055530 AGTCACAGATCAGCAAGTTAGGG 60.056 47.826 0.00 0.00 0.00 3.53
4563 17346 4.199432 AGTCACAGATCAGCAAGTTAGG 57.801 45.455 0.00 0.00 0.00 2.69
4564 17347 5.578727 GGTAAGTCACAGATCAGCAAGTTAG 59.421 44.000 0.00 0.00 0.00 2.34
4565 17348 5.011635 TGGTAAGTCACAGATCAGCAAGTTA 59.988 40.000 0.00 0.00 0.00 2.24
4566 17349 4.202357 TGGTAAGTCACAGATCAGCAAGTT 60.202 41.667 0.00 0.00 0.00 2.66
4567 17350 3.324846 TGGTAAGTCACAGATCAGCAAGT 59.675 43.478 0.00 0.00 0.00 3.16
4568 17351 3.930336 TGGTAAGTCACAGATCAGCAAG 58.070 45.455 0.00 0.00 0.00 4.01
4569 17352 4.223700 AGATGGTAAGTCACAGATCAGCAA 59.776 41.667 0.00 0.00 0.00 3.91
4570 17353 3.771479 AGATGGTAAGTCACAGATCAGCA 59.229 43.478 0.00 0.00 0.00 4.41
4571 17354 4.399004 AGATGGTAAGTCACAGATCAGC 57.601 45.455 0.00 0.00 0.00 4.26
4572 17355 7.388776 TGAAAAAGATGGTAAGTCACAGATCAG 59.611 37.037 0.00 0.00 0.00 2.90
4573 17356 7.223584 TGAAAAAGATGGTAAGTCACAGATCA 58.776 34.615 0.00 0.00 0.00 2.92
4574 17357 7.672983 TGAAAAAGATGGTAAGTCACAGATC 57.327 36.000 0.00 0.00 0.00 2.75
4575 17358 8.105829 AGATGAAAAAGATGGTAAGTCACAGAT 58.894 33.333 0.00 0.00 0.00 2.90
4576 17359 7.453393 AGATGAAAAAGATGGTAAGTCACAGA 58.547 34.615 0.00 0.00 0.00 3.41
4577 17360 7.678947 AGATGAAAAAGATGGTAAGTCACAG 57.321 36.000 0.00 0.00 0.00 3.66
4578 17361 9.739276 AATAGATGAAAAAGATGGTAAGTCACA 57.261 29.630 0.00 0.00 0.00 3.58
4610 17393 9.078990 GGAAAAAGGAAAAGAGGAAAGAATAGA 57.921 33.333 0.00 0.00 0.00 1.98
4611 17394 9.083422 AGGAAAAAGGAAAAGAGGAAAGAATAG 57.917 33.333 0.00 0.00 0.00 1.73
4612 17395 9.434275 AAGGAAAAAGGAAAAGAGGAAAGAATA 57.566 29.630 0.00 0.00 0.00 1.75
4613 17396 7.921041 AGGAAAAAGGAAAAGAGGAAAGAAT 57.079 32.000 0.00 0.00 0.00 2.40
4614 17397 7.733773 AAGGAAAAAGGAAAAGAGGAAAGAA 57.266 32.000 0.00 0.00 0.00 2.52
4615 17398 7.733773 AAAGGAAAAAGGAAAAGAGGAAAGA 57.266 32.000 0.00 0.00 0.00 2.52
4616 17399 9.698309 GATAAAGGAAAAAGGAAAAGAGGAAAG 57.302 33.333 0.00 0.00 0.00 2.62
4617 17400 9.434275 AGATAAAGGAAAAAGGAAAAGAGGAAA 57.566 29.630 0.00 0.00 0.00 3.13
4618 17401 9.434275 AAGATAAAGGAAAAAGGAAAAGAGGAA 57.566 29.630 0.00 0.00 0.00 3.36
4619 17402 9.434275 AAAGATAAAGGAAAAAGGAAAAGAGGA 57.566 29.630 0.00 0.00 0.00 3.71
4626 17409 8.357402 CGGAGAAAAAGATAAAGGAAAAAGGAA 58.643 33.333 0.00 0.00 0.00 3.36
4627 17410 7.504574 ACGGAGAAAAAGATAAAGGAAAAAGGA 59.495 33.333 0.00 0.00 0.00 3.36
4628 17411 7.658261 ACGGAGAAAAAGATAAAGGAAAAAGG 58.342 34.615 0.00 0.00 0.00 3.11
4629 17412 8.568794 AGACGGAGAAAAAGATAAAGGAAAAAG 58.431 33.333 0.00 0.00 0.00 2.27
4630 17413 8.459911 AGACGGAGAAAAAGATAAAGGAAAAA 57.540 30.769 0.00 0.00 0.00 1.94
4631 17414 8.459911 AAGACGGAGAAAAAGATAAAGGAAAA 57.540 30.769 0.00 0.00 0.00 2.29
4632 17415 8.459911 AAAGACGGAGAAAAAGATAAAGGAAA 57.540 30.769 0.00 0.00 0.00 3.13
4633 17416 8.459911 AAAAGACGGAGAAAAAGATAAAGGAA 57.540 30.769 0.00 0.00 0.00 3.36
4634 17417 7.095355 CGAAAAGACGGAGAAAAAGATAAAGGA 60.095 37.037 0.00 0.00 0.00 3.36
4635 17418 7.015877 CGAAAAGACGGAGAAAAAGATAAAGG 58.984 38.462 0.00 0.00 0.00 3.11
4636 17419 7.573627 ACGAAAAGACGGAGAAAAAGATAAAG 58.426 34.615 0.00 0.00 37.61 1.85
4637 17420 7.486802 ACGAAAAGACGGAGAAAAAGATAAA 57.513 32.000 0.00 0.00 37.61 1.40
4638 17421 7.486802 AACGAAAAGACGGAGAAAAAGATAA 57.513 32.000 0.00 0.00 37.61 1.75
4639 17422 7.486802 AAACGAAAAGACGGAGAAAAAGATA 57.513 32.000 0.00 0.00 37.61 1.98
4640 17423 6.373186 AAACGAAAAGACGGAGAAAAAGAT 57.627 33.333 0.00 0.00 37.61 2.40
4641 17424 5.806366 AAACGAAAAGACGGAGAAAAAGA 57.194 34.783 0.00 0.00 37.61 2.52
4642 17425 5.454554 GGAAAACGAAAAGACGGAGAAAAAG 59.545 40.000 0.00 0.00 37.61 2.27
4643 17426 5.124297 AGGAAAACGAAAAGACGGAGAAAAA 59.876 36.000 0.00 0.00 37.61 1.94
4644 17427 4.637091 AGGAAAACGAAAAGACGGAGAAAA 59.363 37.500 0.00 0.00 37.61 2.29
4645 17428 4.193865 AGGAAAACGAAAAGACGGAGAAA 58.806 39.130 0.00 0.00 37.61 2.52
4646 17429 3.800531 AGGAAAACGAAAAGACGGAGAA 58.199 40.909 0.00 0.00 37.61 2.87
4647 17430 3.464111 AGGAAAACGAAAAGACGGAGA 57.536 42.857 0.00 0.00 37.61 3.71
4648 17431 4.547406 AAAGGAAAACGAAAAGACGGAG 57.453 40.909 0.00 0.00 37.61 4.63
4649 17432 4.968812 AAAAGGAAAACGAAAAGACGGA 57.031 36.364 0.00 0.00 37.61 4.69
4670 17453 9.936759 AAAACATCAAACTAGGAAGAACAAAAA 57.063 25.926 0.00 0.00 0.00 1.94
4671 17454 9.936759 AAAAACATCAAACTAGGAAGAACAAAA 57.063 25.926 0.00 0.00 0.00 2.44
4672 17455 9.364989 CAAAAACATCAAACTAGGAAGAACAAA 57.635 29.630 0.00 0.00 0.00 2.83
4673 17456 7.491048 GCAAAAACATCAAACTAGGAAGAACAA 59.509 33.333 0.00 0.00 0.00 2.83
4674 17457 6.978080 GCAAAAACATCAAACTAGGAAGAACA 59.022 34.615 0.00 0.00 0.00 3.18
4675 17458 7.203218 AGCAAAAACATCAAACTAGGAAGAAC 58.797 34.615 0.00 0.00 0.00 3.01
4676 17459 7.346751 AGCAAAAACATCAAACTAGGAAGAA 57.653 32.000 0.00 0.00 0.00 2.52
4677 17460 6.959639 AGCAAAAACATCAAACTAGGAAGA 57.040 33.333 0.00 0.00 0.00 2.87
4678 17461 7.202526 TCAAGCAAAAACATCAAACTAGGAAG 58.797 34.615 0.00 0.00 0.00 3.46
4679 17462 7.106439 TCAAGCAAAAACATCAAACTAGGAA 57.894 32.000 0.00 0.00 0.00 3.36
4680 17463 6.707440 TCAAGCAAAAACATCAAACTAGGA 57.293 33.333 0.00 0.00 0.00 2.94
4681 17464 7.769272 TTTCAAGCAAAAACATCAAACTAGG 57.231 32.000 0.00 0.00 0.00 3.02
4683 17466 9.985318 CAAATTTCAAGCAAAAACATCAAACTA 57.015 25.926 0.00 0.00 0.00 2.24
4684 17467 8.513774 ACAAATTTCAAGCAAAAACATCAAACT 58.486 25.926 0.00 0.00 0.00 2.66
4685 17468 8.577110 CACAAATTTCAAGCAAAAACATCAAAC 58.423 29.630 0.00 0.00 0.00 2.93
4686 17469 8.509690 TCACAAATTTCAAGCAAAAACATCAAA 58.490 25.926 0.00 0.00 0.00 2.69
4687 17470 8.037382 TCACAAATTTCAAGCAAAAACATCAA 57.963 26.923 0.00 0.00 0.00 2.57
4688 17471 7.606858 TCACAAATTTCAAGCAAAAACATCA 57.393 28.000 0.00 0.00 0.00 3.07
4689 17472 9.505995 AATTCACAAATTTCAAGCAAAAACATC 57.494 25.926 0.00 0.00 30.79 3.06
4690 17473 9.857957 AAATTCACAAATTTCAAGCAAAAACAT 57.142 22.222 0.00 0.00 40.28 2.71
4691 17474 9.688592 AAAATTCACAAATTTCAAGCAAAAACA 57.311 22.222 0.00 0.00 42.82 2.83
4722 17505 9.748708 TCGAATTTGAAAAAGAGTTCATTGATT 57.251 25.926 0.00 0.00 37.36 2.57
4723 17506 9.918630 ATCGAATTTGAAAAAGAGTTCATTGAT 57.081 25.926 0.00 0.00 37.36 2.57
4724 17507 9.184062 CATCGAATTTGAAAAAGAGTTCATTGA 57.816 29.630 0.00 0.00 37.36 2.57
4725 17508 9.184062 TCATCGAATTTGAAAAAGAGTTCATTG 57.816 29.630 0.00 0.00 37.36 2.82
4726 17509 9.748708 TTCATCGAATTTGAAAAAGAGTTCATT 57.251 25.926 0.00 0.00 37.36 2.57
4727 17510 9.185192 GTTCATCGAATTTGAAAAAGAGTTCAT 57.815 29.630 0.00 0.00 37.36 2.57
4728 17511 8.405531 AGTTCATCGAATTTGAAAAAGAGTTCA 58.594 29.630 0.00 0.00 35.03 3.18
4729 17512 8.788409 AGTTCATCGAATTTGAAAAAGAGTTC 57.212 30.769 0.00 0.00 35.03 3.01
4736 17519 9.973450 TGGAAAATAGTTCATCGAATTTGAAAA 57.027 25.926 0.00 0.00 35.03 2.29
4737 17520 9.973450 TTGGAAAATAGTTCATCGAATTTGAAA 57.027 25.926 0.00 0.00 35.03 2.69
4738 17521 9.973450 TTTGGAAAATAGTTCATCGAATTTGAA 57.027 25.926 0.00 0.00 0.00 2.69
4742 17525 9.289303 CGAATTTGGAAAATAGTTCATCGAATT 57.711 29.630 0.00 0.00 0.00 2.17
4743 17526 8.673711 TCGAATTTGGAAAATAGTTCATCGAAT 58.326 29.630 0.00 0.00 32.30 3.34
4744 17527 8.035165 TCGAATTTGGAAAATAGTTCATCGAA 57.965 30.769 0.00 0.00 32.30 3.71
4745 17528 7.603963 TCGAATTTGGAAAATAGTTCATCGA 57.396 32.000 0.00 0.00 32.73 3.59
4746 17529 8.122330 TCATCGAATTTGGAAAATAGTTCATCG 58.878 33.333 0.00 0.00 0.00 3.84
4747 17530 9.787532 TTCATCGAATTTGGAAAATAGTTCATC 57.212 29.630 0.00 0.00 0.00 2.92
4748 17531 9.573133 GTTCATCGAATTTGGAAAATAGTTCAT 57.427 29.630 0.00 0.00 0.00 2.57
4749 17532 8.792633 AGTTCATCGAATTTGGAAAATAGTTCA 58.207 29.630 0.00 0.00 0.00 3.18
4750 17533 9.626045 AAGTTCATCGAATTTGGAAAATAGTTC 57.374 29.630 0.00 0.00 0.00 3.01
4751 17534 9.981114 AAAGTTCATCGAATTTGGAAAATAGTT 57.019 25.926 0.00 0.00 0.00 2.24
4752 17535 9.981114 AAAAGTTCATCGAATTTGGAAAATAGT 57.019 25.926 0.00 0.00 0.00 2.12


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.