Multiple sequence alignment - TraesCS1B01G409900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G409900 chr1B 100.000 3527 0 0 1 3527 636859346 636862872 0.000000e+00 6514
1 TraesCS1B01G409900 chr1B 76.839 1373 271 34 1121 2477 637354089 637352748 0.000000e+00 730
2 TraesCS1B01G409900 chr1B 75.277 1444 290 44 1118 2532 636874963 636873558 8.310000e-176 627
3 TraesCS1B01G409900 chr1D 92.577 2681 119 27 898 3527 462262912 462265563 0.000000e+00 3775
4 TraesCS1B01G409900 chr1D 82.109 749 99 20 2805 3527 483006894 483007633 3.010000e-170 608
5 TraesCS1B01G409900 chr1D 81.709 749 102 16 2805 3527 409582453 409583192 3.030000e-165 592
6 TraesCS1B01G409900 chr1D 87.812 320 24 9 505 816 462262601 462262913 9.310000e-96 361
7 TraesCS1B01G409900 chr1D 92.391 92 7 0 397 488 462261381 462261472 7.940000e-27 132
8 TraesCS1B01G409900 chr6D 81.976 749 100 19 2805 3527 372178136 372178875 1.400000e-168 603
9 TraesCS1B01G409900 chr6D 94.792 96 3 2 814 908 132853874 132853780 7.890000e-32 148
10 TraesCS1B01G409900 chr2A 81.976 749 100 17 2805 3527 59721935 59722674 1.400000e-168 603
11 TraesCS1B01G409900 chr2A 92.929 99 6 1 802 900 104720223 104720320 3.670000e-30 143
12 TraesCS1B01G409900 chr3B 81.782 752 95 23 2805 3527 755252576 755253314 3.030000e-165 592
13 TraesCS1B01G409900 chr3B 83.365 523 77 2 2835 3347 8513761 8514283 3.190000e-130 475
14 TraesCS1B01G409900 chr3B 82.983 523 79 7 2835 3347 8517375 8517897 6.900000e-127 464
15 TraesCS1B01G409900 chr4A 81.358 751 100 23 2805 3527 12687787 12687049 3.050000e-160 575
16 TraesCS1B01G409900 chr4A 92.381 105 7 1 796 899 732285582 732285686 7.890000e-32 148
17 TraesCS1B01G409900 chr1A 81.020 706 99 16 2848 3527 464862643 464863339 2.410000e-146 529
18 TraesCS1B01G409900 chr1A 78.834 652 104 15 2805 3430 347629650 347630293 3.280000e-110 409
19 TraesCS1B01G409900 chr1A 92.857 70 5 0 1118 1187 554072425 554072356 6.230000e-18 102
20 TraesCS1B01G409900 chr5A 80.545 514 78 9 2805 3300 119996625 119996116 3.320000e-100 375
21 TraesCS1B01G409900 chr5A 80.038 526 77 14 2805 3312 41436882 41436367 7.200000e-97 364
22 TraesCS1B01G409900 chr5B 96.629 89 3 0 814 902 591579754 591579842 7.890000e-32 148
23 TraesCS1B01G409900 chr2B 94.681 94 5 0 806 899 662898913 662899006 2.840000e-31 147
24 TraesCS1B01G409900 chr2B 92.233 103 6 1 811 911 230293605 230293503 1.020000e-30 145
25 TraesCS1B01G409900 chr2B 89.815 108 9 2 802 908 577816954 577816848 1.710000e-28 137
26 TraesCS1B01G409900 chr3D 92.857 98 6 1 814 910 248217005 248217102 1.320000e-29 141
27 TraesCS1B01G409900 chr3D 93.617 94 5 1 807 900 185621548 185621640 4.750000e-29 139


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G409900 chr1B 636859346 636862872 3526 False 6514.000000 6514 100.000000 1 3527 1 chr1B.!!$F1 3526
1 TraesCS1B01G409900 chr1B 637352748 637354089 1341 True 730.000000 730 76.839000 1121 2477 1 chr1B.!!$R2 1356
2 TraesCS1B01G409900 chr1B 636873558 636874963 1405 True 627.000000 627 75.277000 1118 2532 1 chr1B.!!$R1 1414
3 TraesCS1B01G409900 chr1D 462261381 462265563 4182 False 1422.666667 3775 90.926667 397 3527 3 chr1D.!!$F3 3130
4 TraesCS1B01G409900 chr1D 483006894 483007633 739 False 608.000000 608 82.109000 2805 3527 1 chr1D.!!$F2 722
5 TraesCS1B01G409900 chr1D 409582453 409583192 739 False 592.000000 592 81.709000 2805 3527 1 chr1D.!!$F1 722
6 TraesCS1B01G409900 chr6D 372178136 372178875 739 False 603.000000 603 81.976000 2805 3527 1 chr6D.!!$F1 722
7 TraesCS1B01G409900 chr2A 59721935 59722674 739 False 603.000000 603 81.976000 2805 3527 1 chr2A.!!$F1 722
8 TraesCS1B01G409900 chr3B 755252576 755253314 738 False 592.000000 592 81.782000 2805 3527 1 chr3B.!!$F1 722
9 TraesCS1B01G409900 chr3B 8513761 8517897 4136 False 469.500000 475 83.174000 2835 3347 2 chr3B.!!$F2 512
10 TraesCS1B01G409900 chr4A 12687049 12687787 738 True 575.000000 575 81.358000 2805 3527 1 chr4A.!!$R1 722
11 TraesCS1B01G409900 chr1A 464862643 464863339 696 False 529.000000 529 81.020000 2848 3527 1 chr1A.!!$F2 679
12 TraesCS1B01G409900 chr1A 347629650 347630293 643 False 409.000000 409 78.834000 2805 3430 1 chr1A.!!$F1 625
13 TraesCS1B01G409900 chr5A 119996116 119996625 509 True 375.000000 375 80.545000 2805 3300 1 chr5A.!!$R2 495
14 TraesCS1B01G409900 chr5A 41436367 41436882 515 True 364.000000 364 80.038000 2805 3312 1 chr5A.!!$R1 507

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
40 41 0.037232 GTAAGGTCTTCCAGCTGCGT 60.037 55.0 8.66 0.0 35.89 5.24 F
41 42 0.037326 TAAGGTCTTCCAGCTGCGTG 60.037 55.0 8.66 0.0 35.89 5.34 F
708 1829 0.041833 TCTCTGGCTCCTGCTAGGTT 59.958 55.0 1.84 0.0 46.09 3.50 F
831 1952 0.178970 GCTACTCCCTCCGTCCCATA 60.179 60.0 0.00 0.0 0.00 2.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1041 2162 0.034574 CGGGTTCCATGGACCAATCA 60.035 55.000 25.45 6.58 0.00 2.57 R
1857 2996 0.309612 GGTGTGGCGGTTTGTACTTG 59.690 55.000 0.00 0.00 0.00 3.16 R
2177 3316 2.456000 GCGGACGCTTCATCTTCAA 58.544 52.632 9.76 0.00 38.26 2.69 R
2694 3837 3.335579 GTGGGCGAGTATTCTCTGTTTT 58.664 45.455 0.00 0.00 38.45 2.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 9.596308 AAATTTTTGGAGTAACTATGGTAAGGT 57.404 29.630 0.00 0.00 0.00 3.50
28 29 8.803397 ATTTTTGGAGTAACTATGGTAAGGTC 57.197 34.615 0.00 0.00 0.00 3.85
29 30 7.563724 TTTTGGAGTAACTATGGTAAGGTCT 57.436 36.000 0.00 0.00 0.00 3.85
30 31 7.563724 TTTGGAGTAACTATGGTAAGGTCTT 57.436 36.000 0.00 0.00 0.00 3.01
31 32 6.786967 TGGAGTAACTATGGTAAGGTCTTC 57.213 41.667 0.00 0.00 0.00 2.87
32 33 5.659971 TGGAGTAACTATGGTAAGGTCTTCC 59.340 44.000 0.00 0.00 0.00 3.46
33 34 5.659971 GGAGTAACTATGGTAAGGTCTTCCA 59.340 44.000 0.00 0.00 35.89 3.53
34 35 6.183360 GGAGTAACTATGGTAAGGTCTTCCAG 60.183 46.154 7.54 0.00 34.62 3.86
35 36 4.489306 AACTATGGTAAGGTCTTCCAGC 57.511 45.455 7.54 0.00 34.62 4.85
36 37 3.725634 ACTATGGTAAGGTCTTCCAGCT 58.274 45.455 7.54 0.00 34.62 4.24
37 38 3.452627 ACTATGGTAAGGTCTTCCAGCTG 59.547 47.826 6.78 6.78 34.62 4.24
38 39 0.324943 TGGTAAGGTCTTCCAGCTGC 59.675 55.000 8.66 0.00 35.89 5.25
39 40 0.741221 GGTAAGGTCTTCCAGCTGCG 60.741 60.000 8.66 1.56 35.89 5.18
40 41 0.037232 GTAAGGTCTTCCAGCTGCGT 60.037 55.000 8.66 0.00 35.89 5.24
41 42 0.037326 TAAGGTCTTCCAGCTGCGTG 60.037 55.000 8.66 0.00 35.89 5.34
42 43 1.758440 AAGGTCTTCCAGCTGCGTGA 61.758 55.000 8.66 2.29 35.89 4.35
43 44 1.301716 GGTCTTCCAGCTGCGTGAA 60.302 57.895 8.66 5.95 0.00 3.18
44 45 1.294659 GGTCTTCCAGCTGCGTGAAG 61.295 60.000 19.48 19.48 37.44 3.02
54 55 2.644418 GCGTGAAGCCACATTGCA 59.356 55.556 0.00 0.00 43.34 4.08
55 56 1.213537 GCGTGAAGCCACATTGCAT 59.786 52.632 0.00 0.00 43.34 3.96
56 57 0.799534 GCGTGAAGCCACATTGCATC 60.800 55.000 0.00 0.00 43.34 3.91
57 58 0.522626 CGTGAAGCCACATTGCATCA 59.477 50.000 0.00 0.00 43.34 3.07
58 59 1.466866 CGTGAAGCCACATTGCATCAG 60.467 52.381 0.00 0.00 43.34 2.90
59 60 1.542915 GTGAAGCCACATTGCATCAGT 59.457 47.619 0.00 0.00 39.38 3.41
60 61 2.749076 GTGAAGCCACATTGCATCAGTA 59.251 45.455 0.00 0.00 39.38 2.74
61 62 3.191162 GTGAAGCCACATTGCATCAGTAA 59.809 43.478 0.00 0.00 39.38 2.24
62 63 3.191162 TGAAGCCACATTGCATCAGTAAC 59.809 43.478 0.00 0.00 34.36 2.50
63 64 3.077484 AGCCACATTGCATCAGTAACT 57.923 42.857 0.00 0.00 0.00 2.24
64 65 3.424703 AGCCACATTGCATCAGTAACTT 58.575 40.909 0.00 0.00 0.00 2.66
65 66 3.828451 AGCCACATTGCATCAGTAACTTT 59.172 39.130 0.00 0.00 0.00 2.66
66 67 5.009631 AGCCACATTGCATCAGTAACTTTA 58.990 37.500 0.00 0.00 0.00 1.85
67 68 5.124457 AGCCACATTGCATCAGTAACTTTAG 59.876 40.000 0.00 0.00 0.00 1.85
68 69 5.106157 GCCACATTGCATCAGTAACTTTAGT 60.106 40.000 0.00 0.00 0.00 2.24
69 70 6.317088 CCACATTGCATCAGTAACTTTAGTG 58.683 40.000 0.00 0.00 35.82 2.74
70 71 6.149308 CCACATTGCATCAGTAACTTTAGTGA 59.851 38.462 8.61 8.61 44.57 3.41
71 72 7.308529 CCACATTGCATCAGTAACTTTAGTGAA 60.309 37.037 9.95 0.00 43.91 3.18
72 73 7.747799 CACATTGCATCAGTAACTTTAGTGAAG 59.252 37.037 9.95 7.43 43.91 3.02
74 75 5.223225 GCATCAGTAACTTTAGTGAAGCC 57.777 43.478 17.50 5.71 45.18 4.35
75 76 4.695455 GCATCAGTAACTTTAGTGAAGCCA 59.305 41.667 17.50 0.00 45.18 4.75
76 77 5.390991 GCATCAGTAACTTTAGTGAAGCCAC 60.391 44.000 17.50 0.00 45.18 5.01
77 78 5.284861 TCAGTAACTTTAGTGAAGCCACA 57.715 39.130 4.35 0.00 45.54 4.17
78 79 5.865085 TCAGTAACTTTAGTGAAGCCACAT 58.135 37.500 4.35 0.00 45.54 3.21
79 80 6.296026 TCAGTAACTTTAGTGAAGCCACATT 58.704 36.000 4.35 0.00 45.54 2.71
80 81 6.204688 TCAGTAACTTTAGTGAAGCCACATTG 59.795 38.462 4.35 0.00 45.54 2.82
81 82 6.017109 CAGTAACTTTAGTGAAGCCACATTGT 60.017 38.462 0.00 0.00 45.54 2.71
82 83 5.852282 AACTTTAGTGAAGCCACATTGTT 57.148 34.783 0.00 0.00 45.54 2.83
83 84 5.438761 ACTTTAGTGAAGCCACATTGTTC 57.561 39.130 0.00 0.00 45.54 3.18
84 85 4.887071 ACTTTAGTGAAGCCACATTGTTCA 59.113 37.500 0.00 0.00 45.54 3.18
85 86 5.359576 ACTTTAGTGAAGCCACATTGTTCAA 59.640 36.000 0.00 0.00 45.54 2.69
86 87 6.040842 ACTTTAGTGAAGCCACATTGTTCAAT 59.959 34.615 0.00 0.00 45.54 2.57
87 88 4.247267 AGTGAAGCCACATTGTTCAATG 57.753 40.909 19.75 19.75 45.54 2.82
88 89 3.638160 AGTGAAGCCACATTGTTCAATGT 59.362 39.130 20.87 20.87 45.54 2.71
89 90 4.099881 AGTGAAGCCACATTGTTCAATGTT 59.900 37.500 23.09 12.51 45.54 2.71
90 91 4.209703 GTGAAGCCACATTGTTCAATGTTG 59.790 41.667 23.09 20.84 41.12 3.33
91 92 4.099113 TGAAGCCACATTGTTCAATGTTGA 59.901 37.500 24.10 7.98 41.12 3.18
92 93 3.981211 AGCCACATTGTTCAATGTTGAC 58.019 40.909 24.10 17.48 41.12 3.18
93 94 3.059166 GCCACATTGTTCAATGTTGACC 58.941 45.455 24.10 12.77 41.12 4.02
94 95 3.492309 GCCACATTGTTCAATGTTGACCA 60.492 43.478 24.10 0.00 41.12 4.02
95 96 4.691175 CCACATTGTTCAATGTTGACCAA 58.309 39.130 23.09 7.94 42.46 3.67
96 97 5.114780 CCACATTGTTCAATGTTGACCAAA 58.885 37.500 23.09 0.00 41.76 3.28
97 98 5.006552 CCACATTGTTCAATGTTGACCAAAC 59.993 40.000 23.09 0.27 41.76 2.93
98 99 5.811613 CACATTGTTCAATGTTGACCAAACT 59.188 36.000 23.09 1.56 41.76 2.66
99 100 6.313411 CACATTGTTCAATGTTGACCAAACTT 59.687 34.615 23.09 1.14 41.76 2.66
100 101 6.313411 ACATTGTTCAATGTTGACCAAACTTG 59.687 34.615 20.87 6.67 41.76 3.16
101 102 5.398603 TGTTCAATGTTGACCAAACTTGT 57.601 34.783 0.00 0.00 39.70 3.16
102 103 5.167121 TGTTCAATGTTGACCAAACTTGTG 58.833 37.500 0.00 0.00 39.70 3.33
103 104 5.167845 GTTCAATGTTGACCAAACTTGTGT 58.832 37.500 0.00 0.00 39.70 3.72
104 105 4.742417 TCAATGTTGACCAAACTTGTGTG 58.258 39.130 0.00 0.00 39.70 3.82
105 106 4.460731 TCAATGTTGACCAAACTTGTGTGA 59.539 37.500 0.00 0.00 39.70 3.58
106 107 3.840890 TGTTGACCAAACTTGTGTGAC 57.159 42.857 0.00 0.00 39.70 3.67
107 108 3.149981 TGTTGACCAAACTTGTGTGACA 58.850 40.909 0.00 0.00 39.70 3.58
108 109 3.761218 TGTTGACCAAACTTGTGTGACAT 59.239 39.130 0.00 0.00 39.70 3.06
109 110 4.944317 TGTTGACCAAACTTGTGTGACATA 59.056 37.500 0.00 0.00 39.70 2.29
110 111 5.592282 TGTTGACCAAACTTGTGTGACATAT 59.408 36.000 0.00 0.00 39.70 1.78
111 112 5.940192 TGACCAAACTTGTGTGACATATC 57.060 39.130 0.00 0.00 0.00 1.63
112 113 5.620206 TGACCAAACTTGTGTGACATATCT 58.380 37.500 0.00 0.00 0.00 1.98
113 114 6.061441 TGACCAAACTTGTGTGACATATCTT 58.939 36.000 0.00 0.00 0.00 2.40
114 115 6.545666 TGACCAAACTTGTGTGACATATCTTT 59.454 34.615 0.00 0.00 0.00 2.52
115 116 6.970484 ACCAAACTTGTGTGACATATCTTTC 58.030 36.000 0.00 0.00 0.00 2.62
116 117 6.545666 ACCAAACTTGTGTGACATATCTTTCA 59.454 34.615 0.00 0.00 0.00 2.69
117 118 6.857964 CCAAACTTGTGTGACATATCTTTCAC 59.142 38.462 0.00 0.00 42.18 3.18
118 119 6.560253 AACTTGTGTGACATATCTTTCACC 57.440 37.500 0.00 0.88 41.31 4.02
119 120 5.003804 ACTTGTGTGACATATCTTTCACCC 58.996 41.667 0.00 0.00 41.31 4.61
120 121 4.632327 TGTGTGACATATCTTTCACCCA 57.368 40.909 0.00 0.00 41.31 4.51
121 122 5.178096 TGTGTGACATATCTTTCACCCAT 57.822 39.130 0.00 0.00 41.31 4.00
122 123 5.569355 TGTGTGACATATCTTTCACCCATT 58.431 37.500 0.00 0.00 41.31 3.16
123 124 5.415389 TGTGTGACATATCTTTCACCCATTG 59.585 40.000 0.00 0.00 41.31 2.82
124 125 4.398988 TGTGACATATCTTTCACCCATTGC 59.601 41.667 6.29 0.00 41.31 3.56
125 126 3.953612 TGACATATCTTTCACCCATTGCC 59.046 43.478 0.00 0.00 0.00 4.52
126 127 3.953612 GACATATCTTTCACCCATTGCCA 59.046 43.478 0.00 0.00 0.00 4.92
127 128 4.352009 ACATATCTTTCACCCATTGCCAA 58.648 39.130 0.00 0.00 0.00 4.52
128 129 4.964262 ACATATCTTTCACCCATTGCCAAT 59.036 37.500 0.00 0.00 0.00 3.16
129 130 3.899052 ATCTTTCACCCATTGCCAATG 57.101 42.857 10.52 10.52 38.63 2.82
130 131 2.607499 TCTTTCACCCATTGCCAATGT 58.393 42.857 15.83 0.00 37.18 2.71
131 132 3.772387 TCTTTCACCCATTGCCAATGTA 58.228 40.909 15.83 0.00 37.18 2.29
132 133 4.155709 TCTTTCACCCATTGCCAATGTAA 58.844 39.130 15.83 2.83 37.18 2.41
133 134 4.776837 TCTTTCACCCATTGCCAATGTAAT 59.223 37.500 15.83 0.00 37.18 1.89
134 135 4.734398 TTCACCCATTGCCAATGTAATC 57.266 40.909 15.83 0.00 37.18 1.75
135 136 3.030291 TCACCCATTGCCAATGTAATCC 58.970 45.455 15.83 0.00 37.18 3.01
136 137 2.031120 ACCCATTGCCAATGTAATCCG 58.969 47.619 15.83 0.00 37.18 4.18
137 138 2.031120 CCCATTGCCAATGTAATCCGT 58.969 47.619 15.83 0.00 37.18 4.69
138 139 2.034558 CCCATTGCCAATGTAATCCGTC 59.965 50.000 15.83 0.00 37.18 4.79
139 140 2.951642 CCATTGCCAATGTAATCCGTCT 59.048 45.455 15.83 0.00 37.18 4.18
140 141 4.133820 CCATTGCCAATGTAATCCGTCTA 58.866 43.478 15.83 0.00 37.18 2.59
141 142 4.761739 CCATTGCCAATGTAATCCGTCTAT 59.238 41.667 15.83 0.00 37.18 1.98
142 143 5.335113 CCATTGCCAATGTAATCCGTCTATG 60.335 44.000 15.83 0.00 37.18 2.23
143 144 4.415881 TGCCAATGTAATCCGTCTATGT 57.584 40.909 0.00 0.00 0.00 2.29
144 145 4.776349 TGCCAATGTAATCCGTCTATGTT 58.224 39.130 0.00 0.00 0.00 2.71
145 146 4.814234 TGCCAATGTAATCCGTCTATGTTC 59.186 41.667 0.00 0.00 0.00 3.18
146 147 4.814234 GCCAATGTAATCCGTCTATGTTCA 59.186 41.667 0.00 0.00 0.00 3.18
147 148 5.295787 GCCAATGTAATCCGTCTATGTTCAA 59.704 40.000 0.00 0.00 0.00 2.69
148 149 6.017109 GCCAATGTAATCCGTCTATGTTCAAT 60.017 38.462 0.00 0.00 0.00 2.57
149 150 7.355017 CCAATGTAATCCGTCTATGTTCAATG 58.645 38.462 0.00 0.00 0.00 2.82
150 151 7.355017 CAATGTAATCCGTCTATGTTCAATGG 58.645 38.462 0.00 0.00 0.00 3.16
151 152 5.984725 TGTAATCCGTCTATGTTCAATGGT 58.015 37.500 0.00 0.00 0.00 3.55
152 153 6.411376 TGTAATCCGTCTATGTTCAATGGTT 58.589 36.000 0.00 0.00 0.00 3.67
153 154 6.882140 TGTAATCCGTCTATGTTCAATGGTTT 59.118 34.615 0.00 0.00 0.00 3.27
154 155 6.834168 AATCCGTCTATGTTCAATGGTTTT 57.166 33.333 0.00 0.00 0.00 2.43
155 156 5.873179 TCCGTCTATGTTCAATGGTTTTC 57.127 39.130 0.00 0.00 0.00 2.29
156 157 5.556915 TCCGTCTATGTTCAATGGTTTTCT 58.443 37.500 0.00 0.00 0.00 2.52
157 158 5.642063 TCCGTCTATGTTCAATGGTTTTCTC 59.358 40.000 0.00 0.00 0.00 2.87
158 159 5.643777 CCGTCTATGTTCAATGGTTTTCTCT 59.356 40.000 0.00 0.00 0.00 3.10
159 160 6.149474 CCGTCTATGTTCAATGGTTTTCTCTT 59.851 38.462 0.00 0.00 0.00 2.85
160 161 7.237173 CGTCTATGTTCAATGGTTTTCTCTTC 58.763 38.462 0.00 0.00 0.00 2.87
161 162 7.530863 GTCTATGTTCAATGGTTTTCTCTTCC 58.469 38.462 0.00 0.00 0.00 3.46
162 163 7.391833 GTCTATGTTCAATGGTTTTCTCTTCCT 59.608 37.037 0.00 0.00 0.00 3.36
163 164 6.581171 ATGTTCAATGGTTTTCTCTTCCTC 57.419 37.500 0.00 0.00 0.00 3.71
164 165 4.827284 TGTTCAATGGTTTTCTCTTCCTCC 59.173 41.667 0.00 0.00 0.00 4.30
165 166 4.034285 TCAATGGTTTTCTCTTCCTCCC 57.966 45.455 0.00 0.00 0.00 4.30
166 167 3.657727 TCAATGGTTTTCTCTTCCTCCCT 59.342 43.478 0.00 0.00 0.00 4.20
167 168 4.013050 CAATGGTTTTCTCTTCCTCCCTC 58.987 47.826 0.00 0.00 0.00 4.30
168 169 2.991580 TGGTTTTCTCTTCCTCCCTCT 58.008 47.619 0.00 0.00 0.00 3.69
169 170 2.639839 TGGTTTTCTCTTCCTCCCTCTG 59.360 50.000 0.00 0.00 0.00 3.35
170 171 2.026729 GGTTTTCTCTTCCTCCCTCTGG 60.027 54.545 0.00 0.00 0.00 3.86
171 172 1.958288 TTTCTCTTCCTCCCTCTGGG 58.042 55.000 0.00 0.00 46.11 4.45
184 185 3.933861 CCTCTGGGGTATGCTACTTTT 57.066 47.619 0.00 0.00 0.00 2.27
185 186 4.236527 CCTCTGGGGTATGCTACTTTTT 57.763 45.455 0.00 0.00 0.00 1.94
186 187 4.200092 CCTCTGGGGTATGCTACTTTTTC 58.800 47.826 0.00 0.00 0.00 2.29
187 188 4.080299 CCTCTGGGGTATGCTACTTTTTCT 60.080 45.833 0.00 0.00 0.00 2.52
188 189 5.099042 TCTGGGGTATGCTACTTTTTCTC 57.901 43.478 0.00 0.00 0.00 2.87
189 190 4.080526 TCTGGGGTATGCTACTTTTTCTCC 60.081 45.833 0.00 0.00 0.00 3.71
190 191 3.589735 TGGGGTATGCTACTTTTTCTCCA 59.410 43.478 0.00 0.00 0.00 3.86
191 192 4.229582 TGGGGTATGCTACTTTTTCTCCAT 59.770 41.667 0.00 0.00 0.00 3.41
192 193 5.201243 GGGGTATGCTACTTTTTCTCCATT 58.799 41.667 0.00 0.00 0.00 3.16
193 194 5.067805 GGGGTATGCTACTTTTTCTCCATTG 59.932 44.000 0.00 0.00 0.00 2.82
194 195 5.450550 GGGTATGCTACTTTTTCTCCATTGC 60.451 44.000 0.00 0.00 0.00 3.56
195 196 5.125417 GGTATGCTACTTTTTCTCCATTGCA 59.875 40.000 0.00 0.00 0.00 4.08
196 197 5.927281 ATGCTACTTTTTCTCCATTGCAT 57.073 34.783 0.00 0.00 34.38 3.96
197 198 5.314923 TGCTACTTTTTCTCCATTGCATC 57.685 39.130 0.00 0.00 0.00 3.91
198 199 5.012239 TGCTACTTTTTCTCCATTGCATCT 58.988 37.500 0.00 0.00 0.00 2.90
199 200 5.124457 TGCTACTTTTTCTCCATTGCATCTC 59.876 40.000 0.00 0.00 0.00 2.75
200 201 5.124457 GCTACTTTTTCTCCATTGCATCTCA 59.876 40.000 0.00 0.00 0.00 3.27
201 202 6.349611 GCTACTTTTTCTCCATTGCATCTCAA 60.350 38.462 0.00 0.00 39.32 3.02
202 203 6.600882 ACTTTTTCTCCATTGCATCTCAAT 57.399 33.333 0.00 0.00 45.82 2.57
203 204 6.628185 ACTTTTTCTCCATTGCATCTCAATC 58.372 36.000 0.00 0.00 43.21 2.67
204 205 5.587388 TTTTCTCCATTGCATCTCAATCC 57.413 39.130 0.00 0.00 43.21 3.01
205 206 3.937778 TCTCCATTGCATCTCAATCCA 57.062 42.857 0.00 0.00 43.21 3.41
206 207 3.548770 TCTCCATTGCATCTCAATCCAC 58.451 45.455 0.00 0.00 43.21 4.02
207 208 3.201487 TCTCCATTGCATCTCAATCCACT 59.799 43.478 0.00 0.00 43.21 4.00
208 209 3.548770 TCCATTGCATCTCAATCCACTC 58.451 45.455 0.00 0.00 43.21 3.51
209 210 3.201487 TCCATTGCATCTCAATCCACTCT 59.799 43.478 0.00 0.00 43.21 3.24
210 211 3.564644 CCATTGCATCTCAATCCACTCTC 59.435 47.826 0.00 0.00 43.21 3.20
211 212 3.986996 TTGCATCTCAATCCACTCTCA 57.013 42.857 0.00 0.00 0.00 3.27
212 213 3.986996 TGCATCTCAATCCACTCTCAA 57.013 42.857 0.00 0.00 0.00 3.02
213 214 4.290711 TGCATCTCAATCCACTCTCAAA 57.709 40.909 0.00 0.00 0.00 2.69
214 215 4.654915 TGCATCTCAATCCACTCTCAAAA 58.345 39.130 0.00 0.00 0.00 2.44
215 216 4.456911 TGCATCTCAATCCACTCTCAAAAC 59.543 41.667 0.00 0.00 0.00 2.43
216 217 4.142513 GCATCTCAATCCACTCTCAAAACC 60.143 45.833 0.00 0.00 0.00 3.27
217 218 4.705110 TCTCAATCCACTCTCAAAACCA 57.295 40.909 0.00 0.00 0.00 3.67
218 219 5.246981 TCTCAATCCACTCTCAAAACCAT 57.753 39.130 0.00 0.00 0.00 3.55
219 220 5.005740 TCTCAATCCACTCTCAAAACCATG 58.994 41.667 0.00 0.00 0.00 3.66
220 221 4.728772 TCAATCCACTCTCAAAACCATGT 58.271 39.130 0.00 0.00 0.00 3.21
221 222 5.875224 TCAATCCACTCTCAAAACCATGTA 58.125 37.500 0.00 0.00 0.00 2.29
222 223 6.303054 TCAATCCACTCTCAAAACCATGTAA 58.697 36.000 0.00 0.00 0.00 2.41
223 224 6.947733 TCAATCCACTCTCAAAACCATGTAAT 59.052 34.615 0.00 0.00 0.00 1.89
224 225 6.764308 ATCCACTCTCAAAACCATGTAATG 57.236 37.500 0.00 0.00 46.21 1.90
255 256 9.857957 TTTGTACGAATAAATATTTGGAAACCC 57.142 29.630 11.05 0.00 32.51 4.11
256 257 7.695820 TGTACGAATAAATATTTGGAAACCCG 58.304 34.615 11.05 7.05 32.51 5.28
257 258 6.762702 ACGAATAAATATTTGGAAACCCGT 57.237 33.333 11.05 7.58 32.51 5.28
258 259 7.862512 ACGAATAAATATTTGGAAACCCGTA 57.137 32.000 11.05 0.00 32.51 4.02
259 260 8.278729 ACGAATAAATATTTGGAAACCCGTAA 57.721 30.769 11.05 0.00 32.51 3.18
260 261 8.183536 ACGAATAAATATTTGGAAACCCGTAAC 58.816 33.333 11.05 0.00 32.51 2.50
261 262 8.400186 CGAATAAATATTTGGAAACCCGTAACT 58.600 33.333 11.05 0.00 0.00 2.24
262 263 9.511144 GAATAAATATTTGGAAACCCGTAACTG 57.489 33.333 11.05 0.00 0.00 3.16
263 264 5.907866 AATATTTGGAAACCCGTAACTGG 57.092 39.130 0.00 0.00 0.00 4.00
264 265 2.732844 TTTGGAAACCCGTAACTGGT 57.267 45.000 0.00 0.00 37.85 4.00
274 275 6.904463 AACCCGTAACTGGTTTTAAATGAT 57.096 33.333 0.00 0.00 43.52 2.45
275 276 6.262193 ACCCGTAACTGGTTTTAAATGATG 57.738 37.500 0.00 0.00 29.75 3.07
276 277 5.184287 ACCCGTAACTGGTTTTAAATGATGG 59.816 40.000 0.00 0.00 29.75 3.51
277 278 5.416326 CCCGTAACTGGTTTTAAATGATGGA 59.584 40.000 0.00 0.00 0.00 3.41
278 279 6.404293 CCCGTAACTGGTTTTAAATGATGGAG 60.404 42.308 0.00 0.00 0.00 3.86
279 280 6.150474 CCGTAACTGGTTTTAAATGATGGAGT 59.850 38.462 0.00 0.00 0.00 3.85
280 281 7.308951 CCGTAACTGGTTTTAAATGATGGAGTT 60.309 37.037 0.00 0.00 0.00 3.01
281 282 8.079809 CGTAACTGGTTTTAAATGATGGAGTTT 58.920 33.333 0.00 0.00 0.00 2.66
282 283 9.758651 GTAACTGGTTTTAAATGATGGAGTTTT 57.241 29.630 0.00 0.00 0.00 2.43
313 314 9.919348 TTTATCTACAAAACAGTCGTAACAAAC 57.081 29.630 0.00 0.00 0.00 2.93
314 315 7.781548 ATCTACAAAACAGTCGTAACAAACT 57.218 32.000 0.00 0.00 0.00 2.66
315 316 7.599630 TCTACAAAACAGTCGTAACAAACTT 57.400 32.000 0.00 0.00 0.00 2.66
316 317 8.700722 TCTACAAAACAGTCGTAACAAACTTA 57.299 30.769 0.00 0.00 0.00 2.24
317 318 8.594687 TCTACAAAACAGTCGTAACAAACTTAC 58.405 33.333 0.00 0.00 0.00 2.34
318 319 7.131498 ACAAAACAGTCGTAACAAACTTACA 57.869 32.000 0.00 0.00 0.00 2.41
319 320 7.583230 ACAAAACAGTCGTAACAAACTTACAA 58.417 30.769 0.00 0.00 0.00 2.41
320 321 7.747357 ACAAAACAGTCGTAACAAACTTACAAG 59.253 33.333 0.00 0.00 0.00 3.16
321 322 6.973229 AACAGTCGTAACAAACTTACAAGT 57.027 33.333 0.00 0.00 42.04 3.16
322 323 6.340537 ACAGTCGTAACAAACTTACAAGTG 57.659 37.500 0.00 0.00 39.66 3.16
323 324 5.292589 ACAGTCGTAACAAACTTACAAGTGG 59.707 40.000 0.00 0.00 39.66 4.00
324 325 5.521010 CAGTCGTAACAAACTTACAAGTGGA 59.479 40.000 0.00 0.00 39.66 4.02
325 326 5.751990 AGTCGTAACAAACTTACAAGTGGAG 59.248 40.000 0.00 0.00 39.66 3.86
326 327 4.508861 TCGTAACAAACTTACAAGTGGAGC 59.491 41.667 0.00 0.00 39.66 4.70
327 328 4.271533 CGTAACAAACTTACAAGTGGAGCA 59.728 41.667 0.00 0.00 39.66 4.26
328 329 5.049680 CGTAACAAACTTACAAGTGGAGCAT 60.050 40.000 0.00 0.00 39.66 3.79
329 330 5.852282 AACAAACTTACAAGTGGAGCATT 57.148 34.783 0.00 0.00 39.66 3.56
330 331 5.852282 ACAAACTTACAAGTGGAGCATTT 57.148 34.783 0.00 0.00 39.66 2.32
331 332 5.591099 ACAAACTTACAAGTGGAGCATTTG 58.409 37.500 0.00 0.00 39.66 2.32
332 333 4.853924 AACTTACAAGTGGAGCATTTGG 57.146 40.909 0.00 0.00 39.66 3.28
333 334 4.098914 ACTTACAAGTGGAGCATTTGGA 57.901 40.909 0.00 0.00 37.98 3.53
334 335 4.469657 ACTTACAAGTGGAGCATTTGGAA 58.530 39.130 0.00 0.00 37.98 3.53
335 336 4.892934 ACTTACAAGTGGAGCATTTGGAAA 59.107 37.500 0.00 0.00 34.40 3.13
336 337 5.010012 ACTTACAAGTGGAGCATTTGGAAAG 59.990 40.000 0.00 0.00 34.40 2.62
337 338 3.565307 ACAAGTGGAGCATTTGGAAAGA 58.435 40.909 0.00 0.00 35.79 2.52
338 339 4.154942 ACAAGTGGAGCATTTGGAAAGAT 58.845 39.130 0.00 0.00 35.79 2.40
339 340 4.219288 ACAAGTGGAGCATTTGGAAAGATC 59.781 41.667 0.00 0.00 35.79 2.75
340 341 4.313020 AGTGGAGCATTTGGAAAGATCT 57.687 40.909 0.00 0.00 0.00 2.75
341 342 4.268359 AGTGGAGCATTTGGAAAGATCTC 58.732 43.478 0.00 0.00 0.00 2.75
342 343 3.064545 GTGGAGCATTTGGAAAGATCTCG 59.935 47.826 0.00 0.00 0.00 4.04
343 344 2.615912 GGAGCATTTGGAAAGATCTCGG 59.384 50.000 0.00 0.00 0.00 4.63
344 345 2.615912 GAGCATTTGGAAAGATCTCGGG 59.384 50.000 0.00 0.00 0.00 5.14
345 346 2.239654 AGCATTTGGAAAGATCTCGGGA 59.760 45.455 0.00 0.00 0.00 5.14
346 347 2.356069 GCATTTGGAAAGATCTCGGGAC 59.644 50.000 0.00 0.00 0.00 4.46
347 348 3.609853 CATTTGGAAAGATCTCGGGACA 58.390 45.455 0.00 0.00 0.00 4.02
348 349 3.780804 TTTGGAAAGATCTCGGGACAA 57.219 42.857 0.00 0.00 0.00 3.18
349 350 4.301072 TTTGGAAAGATCTCGGGACAAT 57.699 40.909 0.00 0.00 0.00 2.71
350 351 3.266510 TGGAAAGATCTCGGGACAATG 57.733 47.619 0.00 0.00 0.00 2.82
351 352 2.837591 TGGAAAGATCTCGGGACAATGA 59.162 45.455 0.00 0.00 0.00 2.57
352 353 3.263170 TGGAAAGATCTCGGGACAATGAA 59.737 43.478 0.00 0.00 0.00 2.57
353 354 4.261801 GGAAAGATCTCGGGACAATGAAA 58.738 43.478 0.00 0.00 0.00 2.69
354 355 4.333926 GGAAAGATCTCGGGACAATGAAAG 59.666 45.833 0.00 0.00 0.00 2.62
355 356 4.559862 AAGATCTCGGGACAATGAAAGT 57.440 40.909 0.00 0.00 0.00 2.66
356 357 5.677319 AAGATCTCGGGACAATGAAAGTA 57.323 39.130 0.00 0.00 0.00 2.24
357 358 5.012328 AGATCTCGGGACAATGAAAGTAC 57.988 43.478 0.00 0.00 0.00 2.73
358 359 4.466370 AGATCTCGGGACAATGAAAGTACA 59.534 41.667 0.00 0.00 0.00 2.90
359 360 4.610605 TCTCGGGACAATGAAAGTACAA 57.389 40.909 0.00 0.00 0.00 2.41
360 361 4.963373 TCTCGGGACAATGAAAGTACAAA 58.037 39.130 0.00 0.00 0.00 2.83
361 362 5.369833 TCTCGGGACAATGAAAGTACAAAA 58.630 37.500 0.00 0.00 0.00 2.44
362 363 5.468746 TCTCGGGACAATGAAAGTACAAAAG 59.531 40.000 0.00 0.00 0.00 2.27
363 364 4.517453 TCGGGACAATGAAAGTACAAAAGG 59.483 41.667 0.00 0.00 0.00 3.11
364 365 4.517453 CGGGACAATGAAAGTACAAAAGGA 59.483 41.667 0.00 0.00 0.00 3.36
365 366 5.334879 CGGGACAATGAAAGTACAAAAGGAG 60.335 44.000 0.00 0.00 0.00 3.69
366 367 5.461526 GGACAATGAAAGTACAAAAGGAGC 58.538 41.667 0.00 0.00 0.00 4.70
367 368 5.108385 ACAATGAAAGTACAAAAGGAGCG 57.892 39.130 0.00 0.00 0.00 5.03
368 369 4.023193 ACAATGAAAGTACAAAAGGAGCGG 60.023 41.667 0.00 0.00 0.00 5.52
369 370 1.877443 TGAAAGTACAAAAGGAGCGGC 59.123 47.619 0.00 0.00 0.00 6.53
370 371 1.877443 GAAAGTACAAAAGGAGCGGCA 59.123 47.619 1.45 0.00 0.00 5.69
371 372 1.523758 AAGTACAAAAGGAGCGGCAG 58.476 50.000 1.45 0.00 0.00 4.85
372 373 0.396811 AGTACAAAAGGAGCGGCAGT 59.603 50.000 1.45 0.00 0.00 4.40
373 374 1.621814 AGTACAAAAGGAGCGGCAGTA 59.378 47.619 1.45 0.00 0.00 2.74
374 375 2.236395 AGTACAAAAGGAGCGGCAGTAT 59.764 45.455 1.45 0.00 0.00 2.12
375 376 2.200373 ACAAAAGGAGCGGCAGTATT 57.800 45.000 1.45 0.00 0.00 1.89
376 377 2.514803 ACAAAAGGAGCGGCAGTATTT 58.485 42.857 1.45 0.00 0.00 1.40
377 378 2.890945 ACAAAAGGAGCGGCAGTATTTT 59.109 40.909 1.45 1.27 0.00 1.82
378 379 3.320826 ACAAAAGGAGCGGCAGTATTTTT 59.679 39.130 1.45 0.00 0.00 1.94
431 432 5.565439 GCATGTTTTATCCCATCCATAGTGC 60.565 44.000 0.00 0.00 0.00 4.40
435 436 4.801330 TTATCCCATCCATAGTGCGTAG 57.199 45.455 0.00 0.00 0.00 3.51
450 451 6.250344 AGTGCGTAGGAAATTTAGGTTTTC 57.750 37.500 0.00 0.00 33.31 2.29
454 455 4.154556 CGTAGGAAATTTAGGTTTTCGGCA 59.845 41.667 0.00 0.00 34.58 5.69
471 472 2.289072 CGGCATACCCTCTATTCACCTG 60.289 54.545 0.00 0.00 0.00 4.00
476 477 2.188817 ACCCTCTATTCACCTGTGGTC 58.811 52.381 0.00 0.00 31.02 4.02
481 482 3.361786 TCTATTCACCTGTGGTCGATGA 58.638 45.455 0.00 0.00 31.02 2.92
488 489 1.005037 TGTGGTCGATGAGTGTGCC 60.005 57.895 0.00 0.00 0.00 5.01
490 491 0.530744 GTGGTCGATGAGTGTGCCTA 59.469 55.000 0.00 0.00 0.00 3.93
493 494 1.469940 GGTCGATGAGTGTGCCTACTG 60.470 57.143 0.00 0.00 0.00 2.74
494 495 0.173481 TCGATGAGTGTGCCTACTGC 59.827 55.000 0.00 0.00 41.77 4.40
495 496 0.807667 CGATGAGTGTGCCTACTGCC 60.808 60.000 0.00 0.00 40.16 4.85
496 497 0.539051 GATGAGTGTGCCTACTGCCT 59.461 55.000 0.00 0.00 40.16 4.75
497 498 1.757118 GATGAGTGTGCCTACTGCCTA 59.243 52.381 0.00 0.00 40.16 3.93
498 499 0.895530 TGAGTGTGCCTACTGCCTAC 59.104 55.000 0.00 0.00 40.16 3.18
499 500 1.187087 GAGTGTGCCTACTGCCTACT 58.813 55.000 0.00 0.00 40.16 2.57
500 501 2.291346 TGAGTGTGCCTACTGCCTACTA 60.291 50.000 0.00 0.00 40.16 1.82
501 502 2.959707 GAGTGTGCCTACTGCCTACTAT 59.040 50.000 0.00 0.00 40.16 2.12
502 503 4.142790 GAGTGTGCCTACTGCCTACTATA 58.857 47.826 0.00 0.00 40.16 1.31
507 1620 5.710567 TGTGCCTACTGCCTACTATACTATG 59.289 44.000 0.00 0.00 40.16 2.23
511 1624 5.125739 CCTACTGCCTACTATACTATGCACC 59.874 48.000 0.00 0.00 0.00 5.01
514 1627 3.258372 TGCCTACTATACTATGCACCTGC 59.742 47.826 0.00 0.00 42.50 4.85
534 1647 1.134401 CGGCAGGTGGAGATGTATGTT 60.134 52.381 0.00 0.00 0.00 2.71
539 1652 2.024414 GGTGGAGATGTATGTTTGCCC 58.976 52.381 0.00 0.00 0.00 5.36
545 1658 4.202050 GGAGATGTATGTTTGCCCACAATC 60.202 45.833 0.00 0.00 35.21 2.67
549 1662 6.606796 AGATGTATGTTTGCCCACAATCAATA 59.393 34.615 0.00 0.00 38.60 1.90
575 1688 7.876068 ACACCTTGATTGTATAAAGAAACGAGA 59.124 33.333 0.00 0.00 0.00 4.04
581 1694 8.038351 TGATTGTATAAAGAAACGAGATGGTCA 58.962 33.333 0.00 0.00 0.00 4.02
597 1710 2.240414 TGGTCATGACTGGCTGATCAAT 59.760 45.455 24.50 0.00 29.80 2.57
601 1714 4.749099 GTCATGACTGGCTGATCAATACTC 59.251 45.833 18.83 0.00 0.00 2.59
608 1721 5.714333 ACTGGCTGATCAATACTCGATCTAT 59.286 40.000 0.00 0.00 40.03 1.98
611 1724 8.298729 TGGCTGATCAATACTCGATCTATAAT 57.701 34.615 0.00 0.00 40.03 1.28
628 1741 9.849166 GATCTATAATAGTAGAACTGACAAGGC 57.151 37.037 0.00 0.00 34.59 4.35
633 1746 1.801178 GTAGAACTGACAAGGCTGTGC 59.199 52.381 0.00 0.00 35.30 4.57
641 1754 2.225467 GACAAGGCTGTGCTTCTTCTT 58.775 47.619 0.00 0.00 35.30 2.52
643 1756 0.957362 AAGGCTGTGCTTCTTCTTGC 59.043 50.000 0.00 0.00 0.00 4.01
644 1757 0.179009 AGGCTGTGCTTCTTCTTGCA 60.179 50.000 0.00 0.00 36.79 4.08
645 1758 0.240411 GGCTGTGCTTCTTCTTGCAG 59.760 55.000 0.00 0.00 40.06 4.41
646 1759 1.233019 GCTGTGCTTCTTCTTGCAGA 58.767 50.000 0.00 0.00 40.06 4.26
708 1829 0.041833 TCTCTGGCTCCTGCTAGGTT 59.958 55.000 1.84 0.00 46.09 3.50
727 1848 3.428862 GGTTGGTAGGCCATCAAATTTCG 60.429 47.826 5.01 0.00 45.56 3.46
736 1857 3.056891 GCCATCAAATTTCGTTTCTCCCA 60.057 43.478 0.00 0.00 0.00 4.37
737 1858 4.381932 GCCATCAAATTTCGTTTCTCCCAT 60.382 41.667 0.00 0.00 0.00 4.00
738 1859 5.723295 CCATCAAATTTCGTTTCTCCCATT 58.277 37.500 0.00 0.00 0.00 3.16
739 1860 6.627065 GCCATCAAATTTCGTTTCTCCCATTA 60.627 38.462 0.00 0.00 0.00 1.90
790 1911 6.125029 ACTAGTGATTGATGCCAGCTAAAAT 58.875 36.000 0.00 0.00 0.00 1.82
816 1937 4.938832 TCGCTATGATCTCTTCCTAGCTAC 59.061 45.833 0.00 0.00 42.92 3.58
817 1938 4.941263 CGCTATGATCTCTTCCTAGCTACT 59.059 45.833 0.00 0.00 42.92 2.57
818 1939 5.064707 CGCTATGATCTCTTCCTAGCTACTC 59.935 48.000 0.00 0.00 42.92 2.59
819 1940 5.357032 GCTATGATCTCTTCCTAGCTACTCC 59.643 48.000 0.00 0.00 42.25 3.85
820 1941 4.107127 TGATCTCTTCCTAGCTACTCCC 57.893 50.000 0.00 0.00 0.00 4.30
821 1942 3.724738 TGATCTCTTCCTAGCTACTCCCT 59.275 47.826 0.00 0.00 0.00 4.20
822 1943 3.868619 TCTCTTCCTAGCTACTCCCTC 57.131 52.381 0.00 0.00 0.00 4.30
823 1944 2.444010 TCTCTTCCTAGCTACTCCCTCC 59.556 54.545 0.00 0.00 0.00 4.30
824 1945 1.143277 TCTTCCTAGCTACTCCCTCCG 59.857 57.143 0.00 0.00 0.00 4.63
825 1946 0.924823 TTCCTAGCTACTCCCTCCGT 59.075 55.000 0.00 0.00 0.00 4.69
826 1947 0.473326 TCCTAGCTACTCCCTCCGTC 59.527 60.000 0.00 0.00 0.00 4.79
827 1948 0.537828 CCTAGCTACTCCCTCCGTCC 60.538 65.000 0.00 0.00 0.00 4.79
828 1949 0.537828 CTAGCTACTCCCTCCGTCCC 60.538 65.000 0.00 0.00 0.00 4.46
829 1950 1.284111 TAGCTACTCCCTCCGTCCCA 61.284 60.000 0.00 0.00 0.00 4.37
830 1951 1.457831 GCTACTCCCTCCGTCCCAT 60.458 63.158 0.00 0.00 0.00 4.00
831 1952 0.178970 GCTACTCCCTCCGTCCCATA 60.179 60.000 0.00 0.00 0.00 2.74
832 1953 1.756690 GCTACTCCCTCCGTCCCATAA 60.757 57.143 0.00 0.00 0.00 1.90
833 1954 2.890814 CTACTCCCTCCGTCCCATAAT 58.109 52.381 0.00 0.00 0.00 1.28
834 1955 3.816842 GCTACTCCCTCCGTCCCATAATA 60.817 52.174 0.00 0.00 0.00 0.98
835 1956 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
836 1957 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
837 1958 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
838 1959 5.408824 ACTCCCTCCGTCCCATAATATAAA 58.591 41.667 0.00 0.00 0.00 1.40
839 1960 5.847817 ACTCCCTCCGTCCCATAATATAAAA 59.152 40.000 0.00 0.00 0.00 1.52
840 1961 6.330778 ACTCCCTCCGTCCCATAATATAAAAA 59.669 38.462 0.00 0.00 0.00 1.94
841 1962 6.536447 TCCCTCCGTCCCATAATATAAAAAC 58.464 40.000 0.00 0.00 0.00 2.43
842 1963 5.410439 CCCTCCGTCCCATAATATAAAAACG 59.590 44.000 0.00 0.00 0.00 3.60
843 1964 5.993441 CCTCCGTCCCATAATATAAAAACGT 59.007 40.000 0.00 0.00 0.00 3.99
844 1965 6.484308 CCTCCGTCCCATAATATAAAAACGTT 59.516 38.462 0.00 0.00 0.00 3.99
845 1966 7.012610 CCTCCGTCCCATAATATAAAAACGTTT 59.987 37.037 7.96 7.96 0.00 3.60
846 1967 8.278729 TCCGTCCCATAATATAAAAACGTTTT 57.721 30.769 20.26 20.26 0.00 2.43
847 1968 8.738106 TCCGTCCCATAATATAAAAACGTTTTT 58.262 29.630 33.94 33.94 42.51 1.94
848 1969 8.800031 CCGTCCCATAATATAAAAACGTTTTTG 58.200 33.333 36.92 24.07 40.33 2.44
849 1970 9.557338 CGTCCCATAATATAAAAACGTTTTTGA 57.443 29.630 36.92 27.73 40.33 2.69
862 1983 8.609478 AAAACGTTTTTGACATTAGTGTAGTG 57.391 30.769 20.26 0.00 39.09 2.74
863 1984 6.913873 ACGTTTTTGACATTAGTGTAGTGT 57.086 33.333 0.00 0.00 39.09 3.55
864 1985 6.940714 ACGTTTTTGACATTAGTGTAGTGTC 58.059 36.000 0.00 3.35 43.31 3.67
874 1995 9.382244 GACATTAGTGTAGTGTCAAAAATGTTC 57.618 33.333 5.08 0.00 42.77 3.18
875 1996 9.120538 ACATTAGTGTAGTGTCAAAAATGTTCT 57.879 29.630 0.00 0.00 36.63 3.01
876 1997 9.950680 CATTAGTGTAGTGTCAAAAATGTTCTT 57.049 29.630 0.00 0.00 0.00 2.52
893 2014 8.525290 AATGTTCTTATATTTTGGGACAGAGG 57.475 34.615 0.00 0.00 42.39 3.69
894 2015 6.423182 TGTTCTTATATTTTGGGACAGAGGG 58.577 40.000 0.00 0.00 42.39 4.30
895 2016 6.216662 TGTTCTTATATTTTGGGACAGAGGGA 59.783 38.462 0.00 0.00 42.39 4.20
896 2017 6.500589 TCTTATATTTTGGGACAGAGGGAG 57.499 41.667 0.00 0.00 42.39 4.30
897 2018 5.970640 TCTTATATTTTGGGACAGAGGGAGT 59.029 40.000 0.00 0.00 42.39 3.85
898 2019 7.136885 TCTTATATTTTGGGACAGAGGGAGTA 58.863 38.462 0.00 0.00 42.39 2.59
911 2032 6.001460 ACAGAGGGAGTAGATCTTATTCTCG 58.999 44.000 0.00 2.83 0.00 4.04
917 2038 7.125963 AGGGAGTAGATCTTATTCTCGGTTTTT 59.874 37.037 0.00 0.00 0.00 1.94
929 2050 4.989044 TCTCGGTTTTTGTTTCCAGTTTC 58.011 39.130 0.00 0.00 0.00 2.78
938 2059 9.753669 GTTTTTGTTTCCAGTTTCATAAAGTTG 57.246 29.630 0.00 0.00 0.00 3.16
939 2060 9.495572 TTTTTGTTTCCAGTTTCATAAAGTTGT 57.504 25.926 0.00 0.00 0.00 3.32
947 2068 7.973388 TCCAGTTTCATAAAGTTGTTTCACTTG 59.027 33.333 0.00 0.00 37.07 3.16
967 2088 1.901591 CAAATGCTCTGTGGTGGACT 58.098 50.000 0.00 0.00 0.00 3.85
970 2091 1.901591 ATGCTCTGTGGTGGACTTTG 58.098 50.000 0.00 0.00 0.00 2.77
1041 2162 0.392193 CCTGCGACTTTCATCTGGCT 60.392 55.000 0.00 0.00 0.00 4.75
1091 2212 0.534203 TGGGTTCCTGACGAGTTTGC 60.534 55.000 0.00 0.00 0.00 3.68
1112 2233 0.478072 TGGTCCACTGAAATGCTGGT 59.522 50.000 0.00 0.00 0.00 4.00
1222 2355 1.467734 GTGAGGAAGAAGCACATGCAG 59.532 52.381 6.64 0.00 45.16 4.41
1279 2412 3.611517 CAAGTGTTCGAGAAAACAGCAG 58.388 45.455 8.65 0.00 39.69 4.24
1329 2462 4.152647 TCGACAGGAAGATGCATAGGTAT 58.847 43.478 0.00 0.00 0.00 2.73
1857 2996 0.402121 AGCCTTTGGACTGGGAAGAC 59.598 55.000 0.00 0.00 0.00 3.01
2177 3316 2.795329 AGAATTTCAAGGGCGTGATGT 58.205 42.857 0.00 0.00 0.00 3.06
2543 3682 0.620700 TAGCTCCCCTCCCTTTGTCC 60.621 60.000 0.00 0.00 0.00 4.02
2553 3692 3.397482 CTCCCTTTGTCCATGATCGATC 58.603 50.000 18.72 18.72 0.00 3.69
2554 3693 2.771372 TCCCTTTGTCCATGATCGATCA 59.229 45.455 29.09 29.09 41.70 2.92
2568 3707 5.575019 TGATCGATCATGTGATTTTGCAAG 58.425 37.500 23.99 0.00 34.37 4.01
2574 3713 6.474427 CGATCATGTGATTTTGCAAGCTTTAT 59.526 34.615 0.00 0.00 34.37 1.40
2577 3716 7.798801 TCATGTGATTTTGCAAGCTTTATTTG 58.201 30.769 0.00 0.00 0.00 2.32
2582 3721 9.745323 GTGATTTTGCAAGCTTTATTTGTTATC 57.255 29.630 0.00 0.00 0.00 1.75
2629 3772 7.515957 CATTTGCAAGTAAATGTTCTCCATC 57.484 36.000 13.31 0.00 41.10 3.51
2630 3773 6.899393 TTTGCAAGTAAATGTTCTCCATCT 57.101 33.333 0.00 0.00 31.75 2.90
2631 3774 6.899393 TTGCAAGTAAATGTTCTCCATCTT 57.101 33.333 0.00 0.00 31.75 2.40
2632 3775 7.994425 TTGCAAGTAAATGTTCTCCATCTTA 57.006 32.000 0.00 0.00 31.75 2.10
2648 3791 9.612879 TCTCCATCTTATAATCTTCTGATTCCT 57.387 33.333 0.00 0.00 41.55 3.36
2660 3803 4.715534 TCTGATTCCTTTGGGTGTTGTA 57.284 40.909 0.00 0.00 0.00 2.41
2661 3804 4.651778 TCTGATTCCTTTGGGTGTTGTAG 58.348 43.478 0.00 0.00 0.00 2.74
2662 3805 4.104102 TCTGATTCCTTTGGGTGTTGTAGT 59.896 41.667 0.00 0.00 0.00 2.73
2663 3806 4.798882 TGATTCCTTTGGGTGTTGTAGTT 58.201 39.130 0.00 0.00 0.00 2.24
2671 3814 3.970842 TGGGTGTTGTAGTTTGGTTTCT 58.029 40.909 0.00 0.00 0.00 2.52
2673 3816 4.158764 TGGGTGTTGTAGTTTGGTTTCTTG 59.841 41.667 0.00 0.00 0.00 3.02
2694 3837 4.080687 TGCAAAGATCAATCACACATCCA 58.919 39.130 0.00 0.00 0.00 3.41
2705 3848 6.491062 TCAATCACACATCCAAAACAGAGAAT 59.509 34.615 0.00 0.00 0.00 2.40
2784 3931 3.426568 GCAGCTGGAACCGTGCTC 61.427 66.667 17.12 0.00 34.51 4.26
2792 3939 4.280494 AACCGTGCTCTCGTGCGT 62.280 61.111 0.00 0.00 35.36 5.24
2826 3990 6.749036 ATTATTTACCCAAAACCACCACAA 57.251 33.333 0.00 0.00 0.00 3.33
2827 3991 3.889520 TTTACCCAAAACCACCACAAC 57.110 42.857 0.00 0.00 0.00 3.32
2852 4016 6.964464 TGAGGCTAGGATAACAATTTGGTAA 58.036 36.000 0.00 0.00 0.00 2.85
2871 4035 5.896678 TGGTAATACATTAAAAGCAGGGCAT 59.103 36.000 0.00 0.00 0.00 4.40
2967 4131 1.682344 GATTGGTTGGGCCCACCTC 60.682 63.158 31.30 22.39 41.11 3.85
3014 4178 4.022068 GTGGAAATTTTGCTGAGATGGACA 60.022 41.667 2.25 0.00 0.00 4.02
3084 4251 0.818445 ATCGGTCGCGTAGAGGACAT 60.818 55.000 5.77 0.00 34.87 3.06
3188 4366 1.979693 GGTGGAGAGGTGCTCGTCT 60.980 63.158 10.53 10.53 44.91 4.18
3191 4369 2.640302 GGAGAGGTGCTCGTCTGCA 61.640 63.158 20.46 0.00 44.91 4.41
3210 4394 3.717294 CACGCCCCTACTTGGCCT 61.717 66.667 3.32 0.00 46.48 5.19
3262 8062 2.259818 CGCTCTGGTCGCTGAACT 59.740 61.111 0.00 0.00 0.00 3.01
3285 8085 4.651008 GACGGTCGGTGTTGGCGA 62.651 66.667 0.00 0.00 0.00 5.54
3290 8090 3.902086 TCGGTGTTGGCGACGTGA 61.902 61.111 0.00 0.00 0.00 4.35
3304 8104 4.681978 GTGAAGCTCCACGGCGGT 62.682 66.667 13.24 0.00 37.29 5.68
3382 8215 1.884075 TAGCACGACCTGTTGCCGAT 61.884 55.000 0.00 0.00 0.00 4.18
3387 8220 1.672356 GACCTGTTGCCGATGCTGT 60.672 57.895 0.00 0.00 38.71 4.40
3392 8225 1.971167 GTTGCCGATGCTGTTCCCA 60.971 57.895 0.00 0.00 38.71 4.37
3397 8230 1.079819 CGATGCTGTTCCCACTCGT 60.080 57.895 0.00 0.00 0.00 4.18
3434 8267 3.234630 CTTCGTTCCCTGCCACCGA 62.235 63.158 0.00 0.00 0.00 4.69
3501 8334 1.682684 GGGACTGGAAGCGAGGAGA 60.683 63.158 0.00 0.00 37.60 3.71
3506 8339 4.516195 GGAAGCGAGGAGACGGGC 62.516 72.222 0.00 0.00 0.00 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 9.596308 ACCTTACCATAGTTACTCCAAAAATTT 57.404 29.630 0.00 0.00 0.00 1.82
2 3 9.239551 GACCTTACCATAGTTACTCCAAAAATT 57.760 33.333 0.00 0.00 0.00 1.82
3 4 8.612145 AGACCTTACCATAGTTACTCCAAAAAT 58.388 33.333 0.00 0.00 0.00 1.82
4 5 7.981142 AGACCTTACCATAGTTACTCCAAAAA 58.019 34.615 0.00 0.00 0.00 1.94
5 6 7.563724 AGACCTTACCATAGTTACTCCAAAA 57.436 36.000 0.00 0.00 0.00 2.44
6 7 7.310858 GGAAGACCTTACCATAGTTACTCCAAA 60.311 40.741 0.00 0.00 0.00 3.28
7 8 6.155737 GGAAGACCTTACCATAGTTACTCCAA 59.844 42.308 0.00 0.00 0.00 3.53
8 9 5.659971 GGAAGACCTTACCATAGTTACTCCA 59.340 44.000 0.00 0.00 0.00 3.86
9 10 5.659971 TGGAAGACCTTACCATAGTTACTCC 59.340 44.000 0.00 0.00 37.04 3.85
10 11 6.683360 GCTGGAAGACCTTACCATAGTTACTC 60.683 46.154 0.00 0.00 34.07 2.59
11 12 5.128991 GCTGGAAGACCTTACCATAGTTACT 59.871 44.000 0.00 0.00 34.07 2.24
12 13 5.128991 AGCTGGAAGACCTTACCATAGTTAC 59.871 44.000 0.00 0.00 34.07 2.50
13 14 5.128827 CAGCTGGAAGACCTTACCATAGTTA 59.871 44.000 5.57 0.00 34.07 2.24
14 15 4.080863 CAGCTGGAAGACCTTACCATAGTT 60.081 45.833 5.57 0.00 34.07 2.24
15 16 3.452627 CAGCTGGAAGACCTTACCATAGT 59.547 47.826 5.57 0.00 34.07 2.12
16 17 3.742640 GCAGCTGGAAGACCTTACCATAG 60.743 52.174 17.12 0.00 34.07 2.23
17 18 2.170607 GCAGCTGGAAGACCTTACCATA 59.829 50.000 17.12 0.00 34.07 2.74
18 19 1.065126 GCAGCTGGAAGACCTTACCAT 60.065 52.381 17.12 0.00 34.07 3.55
19 20 0.324943 GCAGCTGGAAGACCTTACCA 59.675 55.000 17.12 0.00 34.07 3.25
20 21 0.741221 CGCAGCTGGAAGACCTTACC 60.741 60.000 17.12 0.00 34.07 2.85
21 22 0.037232 ACGCAGCTGGAAGACCTTAC 60.037 55.000 17.12 0.00 34.07 2.34
22 23 0.037326 CACGCAGCTGGAAGACCTTA 60.037 55.000 17.12 0.00 34.07 2.69
23 24 1.302033 CACGCAGCTGGAAGACCTT 60.302 57.895 17.12 0.00 34.07 3.50
24 25 1.758440 TTCACGCAGCTGGAAGACCT 61.758 55.000 17.12 0.00 34.07 3.85
25 26 1.294659 CTTCACGCAGCTGGAAGACC 61.295 60.000 20.40 1.60 40.28 3.85
26 27 1.905922 GCTTCACGCAGCTGGAAGAC 61.906 60.000 26.08 16.86 40.28 3.01
27 28 1.669115 GCTTCACGCAGCTGGAAGA 60.669 57.895 26.08 13.46 40.28 2.87
28 29 2.684843 GGCTTCACGCAGCTGGAAG 61.685 63.158 20.61 20.61 41.67 3.46
29 30 2.669569 GGCTTCACGCAGCTGGAA 60.670 61.111 17.12 9.67 41.67 3.53
30 31 3.939939 TGGCTTCACGCAGCTGGA 61.940 61.111 17.12 0.78 41.67 3.86
31 32 3.730761 GTGGCTTCACGCAGCTGG 61.731 66.667 17.12 8.27 41.67 4.85
32 33 1.859427 AATGTGGCTTCACGCAGCTG 61.859 55.000 10.11 10.11 44.00 4.24
33 34 1.601759 AATGTGGCTTCACGCAGCT 60.602 52.632 2.24 0.00 44.00 4.24
34 35 1.443194 CAATGTGGCTTCACGCAGC 60.443 57.895 0.00 0.00 44.00 5.25
35 36 1.443194 GCAATGTGGCTTCACGCAG 60.443 57.895 0.00 0.00 44.00 5.18
36 37 1.525718 ATGCAATGTGGCTTCACGCA 61.526 50.000 0.00 9.89 44.00 5.24
37 38 0.799534 GATGCAATGTGGCTTCACGC 60.800 55.000 0.00 0.00 44.00 5.34
38 39 0.522626 TGATGCAATGTGGCTTCACG 59.477 50.000 0.00 0.00 44.00 4.35
39 40 1.542915 ACTGATGCAATGTGGCTTCAC 59.457 47.619 0.00 0.00 41.34 3.18
40 41 1.913778 ACTGATGCAATGTGGCTTCA 58.086 45.000 0.00 0.00 43.19 3.02
41 42 3.441572 AGTTACTGATGCAATGTGGCTTC 59.558 43.478 0.00 0.00 38.16 3.86
42 43 3.424703 AGTTACTGATGCAATGTGGCTT 58.575 40.909 0.00 0.00 34.04 4.35
43 44 3.077484 AGTTACTGATGCAATGTGGCT 57.923 42.857 0.00 0.00 34.04 4.75
44 45 3.855689 AAGTTACTGATGCAATGTGGC 57.144 42.857 0.00 0.00 0.00 5.01
45 46 6.149308 TCACTAAAGTTACTGATGCAATGTGG 59.851 38.462 0.00 0.00 0.00 4.17
46 47 7.132694 TCACTAAAGTTACTGATGCAATGTG 57.867 36.000 0.00 0.00 0.00 3.21
47 48 7.573843 GCTTCACTAAAGTTACTGATGCAATGT 60.574 37.037 0.00 0.00 37.31 2.71
48 49 6.744537 GCTTCACTAAAGTTACTGATGCAATG 59.255 38.462 0.00 0.00 37.31 2.82
49 50 6.127897 GGCTTCACTAAAGTTACTGATGCAAT 60.128 38.462 14.58 0.00 37.31 3.56
50 51 5.181245 GGCTTCACTAAAGTTACTGATGCAA 59.819 40.000 14.58 0.00 37.31 4.08
51 52 4.695455 GGCTTCACTAAAGTTACTGATGCA 59.305 41.667 14.58 0.00 37.31 3.96
52 53 4.695455 TGGCTTCACTAAAGTTACTGATGC 59.305 41.667 0.00 8.68 37.31 3.91
53 54 5.700832 TGTGGCTTCACTAAAGTTACTGATG 59.299 40.000 0.00 0.00 41.73 3.07
54 55 5.865085 TGTGGCTTCACTAAAGTTACTGAT 58.135 37.500 0.00 0.00 41.73 2.90
55 56 5.284861 TGTGGCTTCACTAAAGTTACTGA 57.715 39.130 0.00 0.00 41.73 3.41
56 57 6.017109 ACAATGTGGCTTCACTAAAGTTACTG 60.017 38.462 0.00 0.00 41.73 2.74
57 58 6.062095 ACAATGTGGCTTCACTAAAGTTACT 58.938 36.000 0.00 0.00 41.73 2.24
58 59 6.313744 ACAATGTGGCTTCACTAAAGTTAC 57.686 37.500 0.00 0.00 41.73 2.50
59 60 6.544197 TGAACAATGTGGCTTCACTAAAGTTA 59.456 34.615 0.00 0.00 41.73 2.24
60 61 5.359576 TGAACAATGTGGCTTCACTAAAGTT 59.640 36.000 0.00 0.00 41.73 2.66
61 62 4.887071 TGAACAATGTGGCTTCACTAAAGT 59.113 37.500 0.00 0.00 41.73 2.66
62 63 5.437289 TGAACAATGTGGCTTCACTAAAG 57.563 39.130 0.00 0.00 41.73 1.85
63 64 5.843673 TTGAACAATGTGGCTTCACTAAA 57.156 34.783 0.00 0.00 41.73 1.85
64 65 5.771469 CATTGAACAATGTGGCTTCACTAA 58.229 37.500 16.43 0.00 42.32 2.24
65 66 5.375417 CATTGAACAATGTGGCTTCACTA 57.625 39.130 16.43 0.00 42.32 2.74
66 67 4.247267 CATTGAACAATGTGGCTTCACT 57.753 40.909 16.43 0.00 42.32 3.41
80 81 5.062058 CACACAAGTTTGGTCAACATTGAAC 59.938 40.000 2.56 2.56 45.04 3.18
81 82 5.047731 TCACACAAGTTTGGTCAACATTGAA 60.048 36.000 11.60 0.00 39.21 2.69
82 83 4.460731 TCACACAAGTTTGGTCAACATTGA 59.539 37.500 11.60 0.00 37.93 2.57
83 84 4.562394 GTCACACAAGTTTGGTCAACATTG 59.438 41.667 0.00 5.86 37.93 2.82
84 85 4.219507 TGTCACACAAGTTTGGTCAACATT 59.780 37.500 0.00 0.00 37.93 2.71
85 86 3.761218 TGTCACACAAGTTTGGTCAACAT 59.239 39.130 0.00 0.00 37.93 2.71
86 87 3.149981 TGTCACACAAGTTTGGTCAACA 58.850 40.909 0.00 0.00 37.93 3.33
87 88 3.840890 TGTCACACAAGTTTGGTCAAC 57.159 42.857 0.00 0.00 35.32 3.18
88 89 6.061441 AGATATGTCACACAAGTTTGGTCAA 58.939 36.000 0.00 0.00 0.00 3.18
89 90 5.620206 AGATATGTCACACAAGTTTGGTCA 58.380 37.500 0.00 0.00 0.00 4.02
90 91 6.560253 AAGATATGTCACACAAGTTTGGTC 57.440 37.500 0.00 0.00 0.00 4.02
91 92 6.545666 TGAAAGATATGTCACACAAGTTTGGT 59.454 34.615 0.00 0.00 0.00 3.67
92 93 6.857964 GTGAAAGATATGTCACACAAGTTTGG 59.142 38.462 5.76 0.00 43.02 3.28
93 94 6.857964 GGTGAAAGATATGTCACACAAGTTTG 59.142 38.462 12.58 0.00 44.89 2.93
94 95 6.016276 GGGTGAAAGATATGTCACACAAGTTT 60.016 38.462 12.58 0.00 45.66 2.66
95 96 5.473504 GGGTGAAAGATATGTCACACAAGTT 59.526 40.000 12.58 0.00 45.66 2.66
96 97 5.003804 GGGTGAAAGATATGTCACACAAGT 58.996 41.667 12.58 0.00 45.66 3.16
97 98 5.551760 GGGTGAAAGATATGTCACACAAG 57.448 43.478 12.58 0.00 45.66 3.16
100 101 5.677091 GCAATGGGTGAAAGATATGTCACAC 60.677 44.000 12.58 9.44 46.39 3.82
101 102 4.398988 GCAATGGGTGAAAGATATGTCACA 59.601 41.667 12.58 0.00 44.89 3.58
102 103 4.202050 GGCAATGGGTGAAAGATATGTCAC 60.202 45.833 1.76 1.76 42.83 3.67
103 104 3.953612 GGCAATGGGTGAAAGATATGTCA 59.046 43.478 0.00 0.00 0.00 3.58
104 105 3.953612 TGGCAATGGGTGAAAGATATGTC 59.046 43.478 0.00 0.00 0.00 3.06
105 106 3.979911 TGGCAATGGGTGAAAGATATGT 58.020 40.909 0.00 0.00 0.00 2.29
106 107 5.163385 ACATTGGCAATGGGTGAAAGATATG 60.163 40.000 35.77 14.20 43.21 1.78
107 108 4.964262 ACATTGGCAATGGGTGAAAGATAT 59.036 37.500 35.77 13.93 43.21 1.63
108 109 4.352009 ACATTGGCAATGGGTGAAAGATA 58.648 39.130 35.77 0.00 43.21 1.98
109 110 3.175594 ACATTGGCAATGGGTGAAAGAT 58.824 40.909 35.77 15.05 43.21 2.40
110 111 2.607499 ACATTGGCAATGGGTGAAAGA 58.393 42.857 35.77 0.00 43.21 2.52
111 112 4.533919 TTACATTGGCAATGGGTGAAAG 57.466 40.909 35.77 15.06 43.21 2.62
112 113 4.081198 GGATTACATTGGCAATGGGTGAAA 60.081 41.667 35.77 23.30 43.21 2.69
113 114 3.450457 GGATTACATTGGCAATGGGTGAA 59.550 43.478 35.77 25.19 43.21 3.18
114 115 3.030291 GGATTACATTGGCAATGGGTGA 58.970 45.455 35.77 21.79 43.21 4.02
115 116 2.223782 CGGATTACATTGGCAATGGGTG 60.224 50.000 35.77 18.95 43.21 4.61
116 117 2.031120 CGGATTACATTGGCAATGGGT 58.969 47.619 35.77 23.88 43.21 4.51
117 118 2.031120 ACGGATTACATTGGCAATGGG 58.969 47.619 35.77 21.81 43.21 4.00
118 119 2.951642 AGACGGATTACATTGGCAATGG 59.048 45.455 35.77 22.57 43.21 3.16
119 120 5.239306 ACATAGACGGATTACATTGGCAATG 59.761 40.000 32.73 32.73 44.48 2.82
120 121 5.376625 ACATAGACGGATTACATTGGCAAT 58.623 37.500 6.96 6.96 0.00 3.56
121 122 4.776349 ACATAGACGGATTACATTGGCAA 58.224 39.130 0.68 0.68 0.00 4.52
122 123 4.415881 ACATAGACGGATTACATTGGCA 57.584 40.909 0.00 0.00 0.00 4.92
123 124 4.814234 TGAACATAGACGGATTACATTGGC 59.186 41.667 0.00 0.00 0.00 4.52
124 125 6.918892 TTGAACATAGACGGATTACATTGG 57.081 37.500 0.00 0.00 0.00 3.16
125 126 7.012327 ACCATTGAACATAGACGGATTACATTG 59.988 37.037 0.00 0.00 0.00 2.82
126 127 7.054124 ACCATTGAACATAGACGGATTACATT 58.946 34.615 0.00 0.00 0.00 2.71
127 128 6.591935 ACCATTGAACATAGACGGATTACAT 58.408 36.000 0.00 0.00 0.00 2.29
128 129 5.984725 ACCATTGAACATAGACGGATTACA 58.015 37.500 0.00 0.00 0.00 2.41
129 130 6.920569 AACCATTGAACATAGACGGATTAC 57.079 37.500 0.00 0.00 0.00 1.89
130 131 7.827236 AGAAAACCATTGAACATAGACGGATTA 59.173 33.333 0.00 0.00 0.00 1.75
131 132 6.659242 AGAAAACCATTGAACATAGACGGATT 59.341 34.615 0.00 0.00 0.00 3.01
132 133 6.180472 AGAAAACCATTGAACATAGACGGAT 58.820 36.000 0.00 0.00 0.00 4.18
133 134 5.556915 AGAAAACCATTGAACATAGACGGA 58.443 37.500 0.00 0.00 0.00 4.69
134 135 5.643777 AGAGAAAACCATTGAACATAGACGG 59.356 40.000 0.00 0.00 0.00 4.79
135 136 6.727824 AGAGAAAACCATTGAACATAGACG 57.272 37.500 0.00 0.00 0.00 4.18
136 137 7.391833 AGGAAGAGAAAACCATTGAACATAGAC 59.608 37.037 0.00 0.00 0.00 2.59
137 138 7.461749 AGGAAGAGAAAACCATTGAACATAGA 58.538 34.615 0.00 0.00 0.00 1.98
138 139 7.148171 GGAGGAAGAGAAAACCATTGAACATAG 60.148 40.741 0.00 0.00 0.00 2.23
139 140 6.659242 GGAGGAAGAGAAAACCATTGAACATA 59.341 38.462 0.00 0.00 0.00 2.29
140 141 5.478332 GGAGGAAGAGAAAACCATTGAACAT 59.522 40.000 0.00 0.00 0.00 2.71
141 142 4.827284 GGAGGAAGAGAAAACCATTGAACA 59.173 41.667 0.00 0.00 0.00 3.18
142 143 4.218635 GGGAGGAAGAGAAAACCATTGAAC 59.781 45.833 0.00 0.00 0.00 3.18
143 144 4.106341 AGGGAGGAAGAGAAAACCATTGAA 59.894 41.667 0.00 0.00 0.00 2.69
144 145 3.657727 AGGGAGGAAGAGAAAACCATTGA 59.342 43.478 0.00 0.00 0.00 2.57
145 146 4.013050 GAGGGAGGAAGAGAAAACCATTG 58.987 47.826 0.00 0.00 0.00 2.82
146 147 3.919554 AGAGGGAGGAAGAGAAAACCATT 59.080 43.478 0.00 0.00 0.00 3.16
147 148 3.265479 CAGAGGGAGGAAGAGAAAACCAT 59.735 47.826 0.00 0.00 0.00 3.55
148 149 2.639839 CAGAGGGAGGAAGAGAAAACCA 59.360 50.000 0.00 0.00 0.00 3.67
149 150 2.026729 CCAGAGGGAGGAAGAGAAAACC 60.027 54.545 0.00 0.00 35.59 3.27
150 151 3.342377 CCAGAGGGAGGAAGAGAAAAC 57.658 52.381 0.00 0.00 35.59 2.43
164 165 3.933861 AAAAGTAGCATACCCCAGAGG 57.066 47.619 0.00 0.00 44.47 3.69
165 166 5.104259 AGAAAAAGTAGCATACCCCAGAG 57.896 43.478 0.00 0.00 44.47 3.35
166 167 4.080526 GGAGAAAAAGTAGCATACCCCAGA 60.081 45.833 0.00 0.00 44.47 3.86
167 168 4.200092 GGAGAAAAAGTAGCATACCCCAG 58.800 47.826 0.00 0.00 44.47 4.45
168 169 3.589735 TGGAGAAAAAGTAGCATACCCCA 59.410 43.478 0.00 0.00 44.47 4.96
169 170 4.230745 TGGAGAAAAAGTAGCATACCCC 57.769 45.455 0.00 0.00 44.47 4.95
170 171 5.450550 GCAATGGAGAAAAAGTAGCATACCC 60.451 44.000 0.00 0.00 44.47 3.69
171 172 5.125417 TGCAATGGAGAAAAAGTAGCATACC 59.875 40.000 0.00 0.00 44.47 2.73
172 173 6.194796 TGCAATGGAGAAAAAGTAGCATAC 57.805 37.500 0.00 0.00 43.47 2.39
173 174 6.830324 AGATGCAATGGAGAAAAAGTAGCATA 59.170 34.615 0.00 0.00 39.94 3.14
174 175 5.655532 AGATGCAATGGAGAAAAAGTAGCAT 59.344 36.000 0.00 0.00 42.23 3.79
175 176 5.012239 AGATGCAATGGAGAAAAAGTAGCA 58.988 37.500 0.00 0.00 0.00 3.49
176 177 5.124457 TGAGATGCAATGGAGAAAAAGTAGC 59.876 40.000 0.00 0.00 0.00 3.58
177 178 6.748333 TGAGATGCAATGGAGAAAAAGTAG 57.252 37.500 0.00 0.00 0.00 2.57
178 179 7.148018 GGATTGAGATGCAATGGAGAAAAAGTA 60.148 37.037 0.00 0.00 46.90 2.24
179 180 6.350780 GGATTGAGATGCAATGGAGAAAAAGT 60.351 38.462 0.00 0.00 46.90 2.66
180 181 6.040878 GGATTGAGATGCAATGGAGAAAAAG 58.959 40.000 0.00 0.00 46.90 2.27
181 182 5.481122 TGGATTGAGATGCAATGGAGAAAAA 59.519 36.000 0.00 0.00 46.90 1.94
182 183 5.018149 TGGATTGAGATGCAATGGAGAAAA 58.982 37.500 0.00 0.00 46.90 2.29
183 184 4.400251 GTGGATTGAGATGCAATGGAGAAA 59.600 41.667 0.00 0.00 46.90 2.52
184 185 3.949754 GTGGATTGAGATGCAATGGAGAA 59.050 43.478 0.00 0.00 46.90 2.87
185 186 3.201487 AGTGGATTGAGATGCAATGGAGA 59.799 43.478 0.00 0.00 46.90 3.71
186 187 3.552875 AGTGGATTGAGATGCAATGGAG 58.447 45.455 0.00 0.00 46.90 3.86
187 188 3.201487 AGAGTGGATTGAGATGCAATGGA 59.799 43.478 0.00 0.00 46.90 3.41
188 189 3.552875 AGAGTGGATTGAGATGCAATGG 58.447 45.455 0.00 0.00 46.90 3.16
189 190 4.196971 TGAGAGTGGATTGAGATGCAATG 58.803 43.478 0.00 0.00 46.90 2.82
191 192 3.986996 TGAGAGTGGATTGAGATGCAA 57.013 42.857 0.00 0.00 41.53 4.08
192 193 3.986996 TTGAGAGTGGATTGAGATGCA 57.013 42.857 0.00 0.00 0.00 3.96
193 194 4.142513 GGTTTTGAGAGTGGATTGAGATGC 60.143 45.833 0.00 0.00 0.00 3.91
194 195 5.005740 TGGTTTTGAGAGTGGATTGAGATG 58.994 41.667 0.00 0.00 0.00 2.90
195 196 5.246981 TGGTTTTGAGAGTGGATTGAGAT 57.753 39.130 0.00 0.00 0.00 2.75
196 197 4.705110 TGGTTTTGAGAGTGGATTGAGA 57.295 40.909 0.00 0.00 0.00 3.27
197 198 4.763793 ACATGGTTTTGAGAGTGGATTGAG 59.236 41.667 0.00 0.00 0.00 3.02
198 199 4.728772 ACATGGTTTTGAGAGTGGATTGA 58.271 39.130 0.00 0.00 0.00 2.57
199 200 6.573664 TTACATGGTTTTGAGAGTGGATTG 57.426 37.500 0.00 0.00 0.00 2.67
200 201 6.153340 CCATTACATGGTTTTGAGAGTGGATT 59.847 38.462 0.00 0.00 45.54 3.01
201 202 5.653769 CCATTACATGGTTTTGAGAGTGGAT 59.346 40.000 0.00 0.00 45.54 3.41
202 203 5.009631 CCATTACATGGTTTTGAGAGTGGA 58.990 41.667 0.00 0.00 45.54 4.02
203 204 5.314923 CCATTACATGGTTTTGAGAGTGG 57.685 43.478 0.00 0.00 45.54 4.00
229 230 9.857957 GGGTTTCCAAATATTTATTCGTACAAA 57.142 29.630 0.00 0.00 0.00 2.83
230 231 8.182881 CGGGTTTCCAAATATTTATTCGTACAA 58.817 33.333 0.00 0.00 0.00 2.41
231 232 7.336427 ACGGGTTTCCAAATATTTATTCGTACA 59.664 33.333 0.00 0.00 0.00 2.90
232 233 7.696755 ACGGGTTTCCAAATATTTATTCGTAC 58.303 34.615 0.00 0.00 0.00 3.67
233 234 7.862512 ACGGGTTTCCAAATATTTATTCGTA 57.137 32.000 0.00 0.00 0.00 3.43
234 235 6.762702 ACGGGTTTCCAAATATTTATTCGT 57.237 33.333 0.00 2.53 0.00 3.85
235 236 8.400186 AGTTACGGGTTTCCAAATATTTATTCG 58.600 33.333 0.00 1.97 0.00 3.34
236 237 9.511144 CAGTTACGGGTTTCCAAATATTTATTC 57.489 33.333 0.00 0.00 0.00 1.75
237 238 8.471609 CCAGTTACGGGTTTCCAAATATTTATT 58.528 33.333 0.00 0.00 0.00 1.40
238 239 7.616542 ACCAGTTACGGGTTTCCAAATATTTAT 59.383 33.333 0.33 0.00 34.10 1.40
239 240 6.947158 ACCAGTTACGGGTTTCCAAATATTTA 59.053 34.615 0.33 0.00 34.10 1.40
240 241 5.776208 ACCAGTTACGGGTTTCCAAATATTT 59.224 36.000 0.33 0.00 34.10 1.40
241 242 5.326900 ACCAGTTACGGGTTTCCAAATATT 58.673 37.500 0.33 0.00 34.10 1.28
242 243 4.925836 ACCAGTTACGGGTTTCCAAATAT 58.074 39.130 0.33 0.00 34.10 1.28
243 244 4.370094 ACCAGTTACGGGTTTCCAAATA 57.630 40.909 0.33 0.00 34.10 1.40
244 245 3.232720 ACCAGTTACGGGTTTCCAAAT 57.767 42.857 0.33 0.00 34.10 2.32
245 246 2.732844 ACCAGTTACGGGTTTCCAAA 57.267 45.000 0.33 0.00 34.10 3.28
246 247 2.732844 AACCAGTTACGGGTTTCCAA 57.267 45.000 13.88 0.00 46.19 3.53
252 253 5.184287 CCATCATTTAAAACCAGTTACGGGT 59.816 40.000 0.33 0.33 41.41 5.28
253 254 5.416326 TCCATCATTTAAAACCAGTTACGGG 59.584 40.000 0.00 0.00 0.00 5.28
254 255 6.150474 ACTCCATCATTTAAAACCAGTTACGG 59.850 38.462 0.00 0.00 0.00 4.02
255 256 7.141100 ACTCCATCATTTAAAACCAGTTACG 57.859 36.000 0.00 0.00 0.00 3.18
256 257 9.758651 AAAACTCCATCATTTAAAACCAGTTAC 57.241 29.630 0.00 0.00 0.00 2.50
287 288 9.919348 GTTTGTTACGACTGTTTTGTAGATAAA 57.081 29.630 0.00 0.00 0.00 1.40
288 289 9.316730 AGTTTGTTACGACTGTTTTGTAGATAA 57.683 29.630 0.00 0.00 0.00 1.75
289 290 8.876275 AGTTTGTTACGACTGTTTTGTAGATA 57.124 30.769 0.00 0.00 0.00 1.98
290 291 7.781548 AGTTTGTTACGACTGTTTTGTAGAT 57.218 32.000 0.00 0.00 0.00 1.98
291 292 7.599630 AAGTTTGTTACGACTGTTTTGTAGA 57.400 32.000 0.00 0.00 0.00 2.59
292 293 8.382130 TGTAAGTTTGTTACGACTGTTTTGTAG 58.618 33.333 0.00 0.00 0.00 2.74
293 294 8.249327 TGTAAGTTTGTTACGACTGTTTTGTA 57.751 30.769 0.00 0.00 0.00 2.41
294 295 7.131498 TGTAAGTTTGTTACGACTGTTTTGT 57.869 32.000 0.00 0.00 0.00 2.83
295 296 7.747357 ACTTGTAAGTTTGTTACGACTGTTTTG 59.253 33.333 0.00 0.00 35.21 2.44
296 297 7.747357 CACTTGTAAGTTTGTTACGACTGTTTT 59.253 33.333 0.00 0.00 37.08 2.43
297 298 7.238571 CACTTGTAAGTTTGTTACGACTGTTT 58.761 34.615 0.00 0.00 37.08 2.83
298 299 6.183360 CCACTTGTAAGTTTGTTACGACTGTT 60.183 38.462 0.00 0.00 37.08 3.16
299 300 5.292589 CCACTTGTAAGTTTGTTACGACTGT 59.707 40.000 0.00 0.00 37.08 3.55
300 301 5.521010 TCCACTTGTAAGTTTGTTACGACTG 59.479 40.000 0.00 0.00 37.08 3.51
301 302 5.663456 TCCACTTGTAAGTTTGTTACGACT 58.337 37.500 0.00 0.00 37.08 4.18
302 303 5.557703 GCTCCACTTGTAAGTTTGTTACGAC 60.558 44.000 0.00 0.00 37.08 4.34
303 304 4.508861 GCTCCACTTGTAAGTTTGTTACGA 59.491 41.667 0.00 0.00 37.08 3.43
304 305 4.271533 TGCTCCACTTGTAAGTTTGTTACG 59.728 41.667 0.00 0.00 37.08 3.18
305 306 5.744666 TGCTCCACTTGTAAGTTTGTTAC 57.255 39.130 0.00 0.00 37.08 2.50
306 307 6.952773 AATGCTCCACTTGTAAGTTTGTTA 57.047 33.333 0.00 0.00 37.08 2.41
307 308 5.852282 AATGCTCCACTTGTAAGTTTGTT 57.148 34.783 0.00 0.00 37.08 2.83
308 309 5.451798 CCAAATGCTCCACTTGTAAGTTTGT 60.452 40.000 0.00 0.00 37.08 2.83
309 310 4.984161 CCAAATGCTCCACTTGTAAGTTTG 59.016 41.667 0.00 0.00 37.08 2.93
310 311 4.892934 TCCAAATGCTCCACTTGTAAGTTT 59.107 37.500 0.00 0.00 37.08 2.66
311 312 4.469657 TCCAAATGCTCCACTTGTAAGTT 58.530 39.130 0.00 0.00 37.08 2.66
312 313 4.098914 TCCAAATGCTCCACTTGTAAGT 57.901 40.909 0.00 0.00 40.60 2.24
313 314 5.241506 TCTTTCCAAATGCTCCACTTGTAAG 59.758 40.000 0.00 0.00 0.00 2.34
314 315 5.136828 TCTTTCCAAATGCTCCACTTGTAA 58.863 37.500 0.00 0.00 0.00 2.41
315 316 4.724399 TCTTTCCAAATGCTCCACTTGTA 58.276 39.130 0.00 0.00 0.00 2.41
316 317 3.565307 TCTTTCCAAATGCTCCACTTGT 58.435 40.909 0.00 0.00 0.00 3.16
317 318 4.461781 AGATCTTTCCAAATGCTCCACTTG 59.538 41.667 0.00 0.00 0.00 3.16
318 319 4.670765 AGATCTTTCCAAATGCTCCACTT 58.329 39.130 0.00 0.00 0.00 3.16
319 320 4.268359 GAGATCTTTCCAAATGCTCCACT 58.732 43.478 0.00 0.00 0.00 4.00
320 321 3.064545 CGAGATCTTTCCAAATGCTCCAC 59.935 47.826 0.00 0.00 0.00 4.02
321 322 3.273434 CGAGATCTTTCCAAATGCTCCA 58.727 45.455 0.00 0.00 0.00 3.86
322 323 2.615912 CCGAGATCTTTCCAAATGCTCC 59.384 50.000 0.00 0.00 0.00 4.70
323 324 2.615912 CCCGAGATCTTTCCAAATGCTC 59.384 50.000 0.00 0.00 0.00 4.26
324 325 2.239654 TCCCGAGATCTTTCCAAATGCT 59.760 45.455 0.00 0.00 0.00 3.79
325 326 2.356069 GTCCCGAGATCTTTCCAAATGC 59.644 50.000 0.00 0.00 0.00 3.56
326 327 3.609853 TGTCCCGAGATCTTTCCAAATG 58.390 45.455 0.00 0.00 0.00 2.32
327 328 4.301072 TTGTCCCGAGATCTTTCCAAAT 57.699 40.909 0.00 0.00 0.00 2.32
328 329 3.780804 TTGTCCCGAGATCTTTCCAAA 57.219 42.857 0.00 0.00 0.00 3.28
329 330 3.263170 TCATTGTCCCGAGATCTTTCCAA 59.737 43.478 0.00 0.00 0.00 3.53
330 331 2.837591 TCATTGTCCCGAGATCTTTCCA 59.162 45.455 0.00 0.00 0.00 3.53
331 332 3.543680 TCATTGTCCCGAGATCTTTCC 57.456 47.619 0.00 0.00 0.00 3.13
332 333 4.938226 ACTTTCATTGTCCCGAGATCTTTC 59.062 41.667 0.00 0.00 0.00 2.62
333 334 4.911390 ACTTTCATTGTCCCGAGATCTTT 58.089 39.130 0.00 0.00 0.00 2.52
334 335 4.559862 ACTTTCATTGTCCCGAGATCTT 57.440 40.909 0.00 0.00 0.00 2.40
335 336 4.466370 TGTACTTTCATTGTCCCGAGATCT 59.534 41.667 0.00 0.00 0.00 2.75
336 337 4.755411 TGTACTTTCATTGTCCCGAGATC 58.245 43.478 0.00 0.00 0.00 2.75
337 338 4.819105 TGTACTTTCATTGTCCCGAGAT 57.181 40.909 0.00 0.00 0.00 2.75
338 339 4.610605 TTGTACTTTCATTGTCCCGAGA 57.389 40.909 0.00 0.00 0.00 4.04
339 340 5.334879 CCTTTTGTACTTTCATTGTCCCGAG 60.335 44.000 0.00 0.00 0.00 4.63
340 341 4.517453 CCTTTTGTACTTTCATTGTCCCGA 59.483 41.667 0.00 0.00 0.00 5.14
341 342 4.517453 TCCTTTTGTACTTTCATTGTCCCG 59.483 41.667 0.00 0.00 0.00 5.14
342 343 5.564848 GCTCCTTTTGTACTTTCATTGTCCC 60.565 44.000 0.00 0.00 0.00 4.46
343 344 5.461526 GCTCCTTTTGTACTTTCATTGTCC 58.538 41.667 0.00 0.00 0.00 4.02
344 345 5.147162 CGCTCCTTTTGTACTTTCATTGTC 58.853 41.667 0.00 0.00 0.00 3.18
345 346 4.023193 CCGCTCCTTTTGTACTTTCATTGT 60.023 41.667 0.00 0.00 0.00 2.71
346 347 4.475944 CCGCTCCTTTTGTACTTTCATTG 58.524 43.478 0.00 0.00 0.00 2.82
347 348 3.057526 GCCGCTCCTTTTGTACTTTCATT 60.058 43.478 0.00 0.00 0.00 2.57
348 349 2.488153 GCCGCTCCTTTTGTACTTTCAT 59.512 45.455 0.00 0.00 0.00 2.57
349 350 1.877443 GCCGCTCCTTTTGTACTTTCA 59.123 47.619 0.00 0.00 0.00 2.69
350 351 1.877443 TGCCGCTCCTTTTGTACTTTC 59.123 47.619 0.00 0.00 0.00 2.62
351 352 1.880027 CTGCCGCTCCTTTTGTACTTT 59.120 47.619 0.00 0.00 0.00 2.66
352 353 1.202770 ACTGCCGCTCCTTTTGTACTT 60.203 47.619 0.00 0.00 0.00 2.24
353 354 0.396811 ACTGCCGCTCCTTTTGTACT 59.603 50.000 0.00 0.00 0.00 2.73
354 355 2.088950 TACTGCCGCTCCTTTTGTAC 57.911 50.000 0.00 0.00 0.00 2.90
355 356 3.343941 AATACTGCCGCTCCTTTTGTA 57.656 42.857 0.00 0.00 0.00 2.41
356 357 2.200373 AATACTGCCGCTCCTTTTGT 57.800 45.000 0.00 0.00 0.00 2.83
357 358 3.575965 AAAATACTGCCGCTCCTTTTG 57.424 42.857 0.00 0.00 0.00 2.44
393 394 9.382275 GGATAAAACATGCCATATGAACTTTTT 57.618 29.630 3.65 5.91 0.00 1.94
394 395 7.986889 GGGATAAAACATGCCATATGAACTTTT 59.013 33.333 3.65 3.63 0.00 2.27
395 396 7.125507 TGGGATAAAACATGCCATATGAACTTT 59.874 33.333 3.65 0.00 34.49 2.66
431 432 4.154556 TGCCGAAAACCTAAATTTCCTACG 59.845 41.667 0.00 0.00 34.10 3.51
435 436 5.345702 GGTATGCCGAAAACCTAAATTTCC 58.654 41.667 0.00 0.00 34.10 3.13
450 451 1.971357 AGGTGAATAGAGGGTATGCCG 59.029 52.381 0.00 0.00 34.97 5.69
454 455 3.967987 GACCACAGGTGAATAGAGGGTAT 59.032 47.826 0.00 0.00 35.25 2.73
471 472 0.530744 TAGGCACACTCATCGACCAC 59.469 55.000 0.00 0.00 0.00 4.16
476 477 2.670635 GCAGTAGGCACACTCATCG 58.329 57.895 0.00 0.00 43.97 3.84
488 489 5.946972 AGGTGCATAGTATAGTAGGCAGTAG 59.053 44.000 23.46 0.00 40.18 2.57
490 491 4.524714 CAGGTGCATAGTATAGTAGGCAGT 59.475 45.833 23.46 13.31 40.18 4.40
493 494 3.673594 CGCAGGTGCATAGTATAGTAGGC 60.674 52.174 15.66 15.66 42.21 3.93
494 495 4.098055 CGCAGGTGCATAGTATAGTAGG 57.902 50.000 2.33 0.00 42.21 3.18
511 1624 1.960040 TACATCTCCACCTGCCGCAG 61.960 60.000 13.82 13.82 0.00 5.18
514 1627 0.465705 ACATACATCTCCACCTGCCG 59.534 55.000 0.00 0.00 0.00 5.69
525 1638 4.717233 TGATTGTGGGCAAACATACATC 57.283 40.909 0.00 0.00 38.21 3.06
534 1647 3.168035 AGGTGTATTGATTGTGGGCAA 57.832 42.857 0.00 0.00 39.16 4.52
549 1662 7.876068 TCTCGTTTCTTTATACAATCAAGGTGT 59.124 33.333 0.00 0.00 0.00 4.16
567 1680 2.932614 CCAGTCATGACCATCTCGTTTC 59.067 50.000 22.21 0.00 0.00 2.78
569 1682 1.406069 GCCAGTCATGACCATCTCGTT 60.406 52.381 22.21 0.00 0.00 3.85
570 1683 0.176680 GCCAGTCATGACCATCTCGT 59.823 55.000 22.21 0.00 0.00 4.18
575 1688 1.841919 TGATCAGCCAGTCATGACCAT 59.158 47.619 22.21 1.56 0.00 3.55
581 1694 3.638627 TCGAGTATTGATCAGCCAGTCAT 59.361 43.478 0.00 0.00 0.00 3.06
608 1721 6.631016 CACAGCCTTGTCAGTTCTACTATTA 58.369 40.000 0.00 0.00 34.62 0.98
611 1724 3.306088 GCACAGCCTTGTCAGTTCTACTA 60.306 47.826 0.00 0.00 34.62 1.82
614 1727 1.694150 AGCACAGCCTTGTCAGTTCTA 59.306 47.619 0.00 0.00 34.62 2.10
617 1730 1.133976 AGAAGCACAGCCTTGTCAGTT 60.134 47.619 0.00 0.00 34.62 3.16
618 1731 0.471617 AGAAGCACAGCCTTGTCAGT 59.528 50.000 0.00 0.00 34.62 3.41
619 1732 1.534595 GAAGAAGCACAGCCTTGTCAG 59.465 52.381 0.00 0.00 34.62 3.51
620 1733 1.141657 AGAAGAAGCACAGCCTTGTCA 59.858 47.619 0.00 0.00 34.62 3.58
628 1741 1.197264 GCTCTGCAAGAAGAAGCACAG 59.803 52.381 0.00 0.00 46.34 3.66
633 1746 1.337635 ACCTCGCTCTGCAAGAAGAAG 60.338 52.381 0.00 0.00 46.34 2.85
641 1754 2.147315 GACTGTCACCTCGCTCTGCA 62.147 60.000 2.24 0.00 0.00 4.41
643 1756 0.600557 AAGACTGTCACCTCGCTCTG 59.399 55.000 10.88 0.00 0.00 3.35
644 1757 0.885196 GAAGACTGTCACCTCGCTCT 59.115 55.000 10.88 0.00 0.00 4.09
645 1758 0.109039 GGAAGACTGTCACCTCGCTC 60.109 60.000 10.88 0.00 0.00 5.03
646 1759 0.540830 AGGAAGACTGTCACCTCGCT 60.541 55.000 16.81 5.68 0.00 4.93
727 1848 4.405358 TGCATGGGAATTAATGGGAGAAAC 59.595 41.667 0.00 0.00 0.00 2.78
736 1857 8.472413 GCACTAATATCATGCATGGGAATTAAT 58.528 33.333 25.97 13.79 39.23 1.40
737 1858 7.670979 AGCACTAATATCATGCATGGGAATTAA 59.329 33.333 25.97 5.63 41.97 1.40
738 1859 7.121611 CAGCACTAATATCATGCATGGGAATTA 59.878 37.037 25.97 21.74 41.97 1.40
739 1860 6.014647 AGCACTAATATCATGCATGGGAATT 58.985 36.000 25.97 21.78 41.97 2.17
816 1937 6.368779 TTTTATATTATGGGACGGAGGGAG 57.631 41.667 0.00 0.00 0.00 4.30
817 1938 6.536447 GTTTTTATATTATGGGACGGAGGGA 58.464 40.000 0.00 0.00 0.00 4.20
818 1939 5.410439 CGTTTTTATATTATGGGACGGAGGG 59.590 44.000 0.00 0.00 0.00 4.30
819 1940 5.993441 ACGTTTTTATATTATGGGACGGAGG 59.007 40.000 0.00 0.00 33.95 4.30
820 1941 7.486802 AACGTTTTTATATTATGGGACGGAG 57.513 36.000 0.00 0.00 33.95 4.63
821 1942 7.862512 AAACGTTTTTATATTATGGGACGGA 57.137 32.000 7.96 0.00 33.95 4.69
822 1943 8.800031 CAAAAACGTTTTTATATTATGGGACGG 58.200 33.333 32.12 15.00 38.23 4.79
823 1944 9.557338 TCAAAAACGTTTTTATATTATGGGACG 57.443 29.630 32.12 18.06 38.23 4.79
836 1957 9.068008 CACTACACTAATGTCAAAAACGTTTTT 57.932 29.630 28.62 28.62 40.48 1.94
837 1958 8.238631 ACACTACACTAATGTCAAAAACGTTTT 58.761 29.630 20.26 20.26 40.48 2.43
838 1959 7.754625 ACACTACACTAATGTCAAAAACGTTT 58.245 30.769 7.96 7.96 40.48 3.60
839 1960 7.311364 ACACTACACTAATGTCAAAAACGTT 57.689 32.000 0.00 0.00 40.48 3.99
840 1961 6.913873 ACACTACACTAATGTCAAAAACGT 57.086 33.333 0.00 0.00 40.48 3.99
848 1969 9.382244 GAACATTTTTGACACTACACTAATGTC 57.618 33.333 0.00 0.00 42.54 3.06
849 1970 9.120538 AGAACATTTTTGACACTACACTAATGT 57.879 29.630 0.00 0.00 43.30 2.71
850 1971 9.950680 AAGAACATTTTTGACACTACACTAATG 57.049 29.630 0.00 0.00 32.26 1.90
867 1988 8.971073 CCTCTGTCCCAAAATATAAGAACATTT 58.029 33.333 0.00 0.00 0.00 2.32
868 1989 7.561356 CCCTCTGTCCCAAAATATAAGAACATT 59.439 37.037 0.00 0.00 0.00 2.71
869 1990 7.062957 CCCTCTGTCCCAAAATATAAGAACAT 58.937 38.462 0.00 0.00 0.00 2.71
870 1991 6.216662 TCCCTCTGTCCCAAAATATAAGAACA 59.783 38.462 0.00 0.00 0.00 3.18
871 1992 6.659824 TCCCTCTGTCCCAAAATATAAGAAC 58.340 40.000 0.00 0.00 0.00 3.01
872 1993 6.447084 ACTCCCTCTGTCCCAAAATATAAGAA 59.553 38.462 0.00 0.00 0.00 2.52
873 1994 5.970640 ACTCCCTCTGTCCCAAAATATAAGA 59.029 40.000 0.00 0.00 0.00 2.10
874 1995 6.253946 ACTCCCTCTGTCCCAAAATATAAG 57.746 41.667 0.00 0.00 0.00 1.73
875 1996 7.136885 TCTACTCCCTCTGTCCCAAAATATAA 58.863 38.462 0.00 0.00 0.00 0.98
876 1997 6.689561 TCTACTCCCTCTGTCCCAAAATATA 58.310 40.000 0.00 0.00 0.00 0.86
877 1998 5.538877 TCTACTCCCTCTGTCCCAAAATAT 58.461 41.667 0.00 0.00 0.00 1.28
878 1999 4.955335 TCTACTCCCTCTGTCCCAAAATA 58.045 43.478 0.00 0.00 0.00 1.40
879 2000 3.803340 TCTACTCCCTCTGTCCCAAAAT 58.197 45.455 0.00 0.00 0.00 1.82
880 2001 3.269592 TCTACTCCCTCTGTCCCAAAA 57.730 47.619 0.00 0.00 0.00 2.44
881 2002 3.012959 AGATCTACTCCCTCTGTCCCAAA 59.987 47.826 0.00 0.00 0.00 3.28
882 2003 2.587777 AGATCTACTCCCTCTGTCCCAA 59.412 50.000 0.00 0.00 0.00 4.12
883 2004 2.218673 AGATCTACTCCCTCTGTCCCA 58.781 52.381 0.00 0.00 0.00 4.37
884 2005 3.322191 AAGATCTACTCCCTCTGTCCC 57.678 52.381 0.00 0.00 0.00 4.46
885 2006 6.311735 AGAATAAGATCTACTCCCTCTGTCC 58.688 44.000 0.00 0.00 0.00 4.02
886 2007 6.148811 CGAGAATAAGATCTACTCCCTCTGTC 59.851 46.154 0.00 0.00 0.00 3.51
887 2008 6.001460 CGAGAATAAGATCTACTCCCTCTGT 58.999 44.000 0.00 0.00 0.00 3.41
888 2009 5.414454 CCGAGAATAAGATCTACTCCCTCTG 59.586 48.000 0.00 0.00 0.00 3.35
889 2010 5.073965 ACCGAGAATAAGATCTACTCCCTCT 59.926 44.000 0.00 0.00 0.00 3.69
890 2011 5.318630 ACCGAGAATAAGATCTACTCCCTC 58.681 45.833 0.00 0.00 0.00 4.30
891 2012 5.327737 ACCGAGAATAAGATCTACTCCCT 57.672 43.478 0.00 0.00 0.00 4.20
892 2013 6.408107 AAACCGAGAATAAGATCTACTCCC 57.592 41.667 0.00 0.00 0.00 4.30
893 2014 7.764901 ACAAAAACCGAGAATAAGATCTACTCC 59.235 37.037 0.00 0.00 0.00 3.85
894 2015 8.705048 ACAAAAACCGAGAATAAGATCTACTC 57.295 34.615 0.00 2.65 0.00 2.59
895 2016 9.503399 AAACAAAAACCGAGAATAAGATCTACT 57.497 29.630 0.00 0.00 0.00 2.57
896 2017 9.756461 GAAACAAAAACCGAGAATAAGATCTAC 57.244 33.333 0.00 0.00 0.00 2.59
897 2018 8.943002 GGAAACAAAAACCGAGAATAAGATCTA 58.057 33.333 0.00 0.00 0.00 1.98
898 2019 7.447238 TGGAAACAAAAACCGAGAATAAGATCT 59.553 33.333 0.00 0.00 37.44 2.75
911 2032 8.487313 ACTTTATGAAACTGGAAACAAAAACC 57.513 30.769 0.00 0.00 42.06 3.27
917 2038 8.307483 TGAAACAACTTTATGAAACTGGAAACA 58.693 29.630 0.00 0.00 39.59 2.83
929 2050 6.847289 GCATTTGCAAGTGAAACAACTTTATG 59.153 34.615 24.46 9.47 38.34 1.90
938 2059 3.488310 CACAGAGCATTTGCAAGTGAAAC 59.512 43.478 24.46 13.83 45.16 2.78
939 2060 3.491276 CCACAGAGCATTTGCAAGTGAAA 60.491 43.478 24.46 0.00 45.16 2.69
947 2068 0.242017 GTCCACCACAGAGCATTTGC 59.758 55.000 0.00 0.00 42.49 3.68
967 2088 4.021632 TGTCAAATCGGCCATGAAATCAAA 60.022 37.500 2.24 0.00 0.00 2.69
970 2091 3.489738 CCTGTCAAATCGGCCATGAAATC 60.490 47.826 2.24 0.00 0.00 2.17
1041 2162 0.034574 CGGGTTCCATGGACCAATCA 60.035 55.000 25.45 6.58 0.00 2.57
1065 2186 3.555324 TCAGGAACCCACGCAGCA 61.555 61.111 0.00 0.00 0.00 4.41
1078 2199 0.868406 GACCAAGCAAACTCGTCAGG 59.132 55.000 0.00 0.00 0.00 3.86
1091 2212 1.542915 CCAGCATTTCAGTGGACCAAG 59.457 52.381 0.00 0.00 32.60 3.61
1112 2233 1.204704 CATACGTCTGGAAGCAGGTGA 59.795 52.381 0.00 0.00 0.00 4.02
1222 2355 5.530543 GGATCTCCATCTCCATCTTGTTTTC 59.469 44.000 0.00 0.00 35.64 2.29
1248 2381 1.586154 CGAACACTTGCATGGGGTCC 61.586 60.000 13.83 0.00 0.00 4.46
1254 2387 3.951306 TGTTTTCTCGAACACTTGCATG 58.049 40.909 0.00 0.00 34.77 4.06
1329 2462 0.809385 GACGTCGAATGAGTCCAGGA 59.191 55.000 0.00 0.00 0.00 3.86
1857 2996 0.309612 GGTGTGGCGGTTTGTACTTG 59.690 55.000 0.00 0.00 0.00 3.16
2177 3316 2.456000 GCGGACGCTTCATCTTCAA 58.544 52.632 9.76 0.00 38.26 2.69
2553 3692 7.577979 ACAAATAAAGCTTGCAAAATCACATG 58.422 30.769 0.00 0.00 0.00 3.21
2554 3693 7.733402 ACAAATAAAGCTTGCAAAATCACAT 57.267 28.000 0.00 0.00 0.00 3.21
2627 3770 9.804977 CCCAAAGGAATCAGAAGATTATAAGAT 57.195 33.333 0.00 0.00 44.30 2.40
2629 3772 8.844244 CACCCAAAGGAATCAGAAGATTATAAG 58.156 37.037 0.00 0.00 44.30 1.73
2630 3773 8.336235 ACACCCAAAGGAATCAGAAGATTATAA 58.664 33.333 0.00 0.00 44.30 0.98
2631 3774 7.872138 ACACCCAAAGGAATCAGAAGATTATA 58.128 34.615 0.00 0.00 44.30 0.98
2632 3775 6.735556 ACACCCAAAGGAATCAGAAGATTAT 58.264 36.000 0.00 0.00 44.30 1.28
2647 3790 4.729227 AACCAAACTACAACACCCAAAG 57.271 40.909 0.00 0.00 0.00 2.77
2648 3791 4.773149 AGAAACCAAACTACAACACCCAAA 59.227 37.500 0.00 0.00 0.00 3.28
2649 3792 4.345854 AGAAACCAAACTACAACACCCAA 58.654 39.130 0.00 0.00 0.00 4.12
2660 3803 5.596836 TGATCTTTGCAAGAAACCAAACT 57.403 34.783 0.00 0.00 41.63 2.66
2661 3804 6.479660 TGATTGATCTTTGCAAGAAACCAAAC 59.520 34.615 0.00 2.31 41.63 2.93
2662 3805 6.479660 GTGATTGATCTTTGCAAGAAACCAAA 59.520 34.615 0.00 0.00 41.63 3.28
2663 3806 5.984926 GTGATTGATCTTTGCAAGAAACCAA 59.015 36.000 0.00 2.80 41.63 3.67
2671 3814 4.523558 TGGATGTGTGATTGATCTTTGCAA 59.476 37.500 0.00 0.00 0.00 4.08
2673 3816 4.707030 TGGATGTGTGATTGATCTTTGC 57.293 40.909 0.00 0.00 0.00 3.68
2681 3824 5.694231 TCTCTGTTTTGGATGTGTGATTG 57.306 39.130 0.00 0.00 0.00 2.67
2694 3837 3.335579 GTGGGCGAGTATTCTCTGTTTT 58.664 45.455 0.00 0.00 38.45 2.43
2705 3848 3.766691 GCCTTCCGTGGGCGAGTA 61.767 66.667 0.00 0.00 40.19 2.59
2784 3931 4.374702 GTTGCAGGCACGCACGAG 62.375 66.667 0.65 0.00 42.87 4.18
2792 3939 3.834813 TGGGTAAATAATTGTTGCAGGCA 59.165 39.130 0.00 0.00 0.00 4.75
2803 3950 6.327887 AGTTGTGGTGGTTTTGGGTAAATAAT 59.672 34.615 0.00 0.00 0.00 1.28
2826 3990 5.044846 ACCAAATTGTTATCCTAGCCTCAGT 60.045 40.000 0.00 0.00 0.00 3.41
2827 3991 5.440610 ACCAAATTGTTATCCTAGCCTCAG 58.559 41.667 0.00 0.00 0.00 3.35
2878 4042 2.364632 CATTAGGCACATTTCCGGTGA 58.635 47.619 0.00 0.00 38.54 4.02
2967 4131 1.709147 GCATGCCACGTCAGCCTTAG 61.709 60.000 6.36 0.00 0.00 2.18
3014 4178 2.775418 TGGATGACATGTGGGACCTAT 58.225 47.619 1.15 0.00 0.00 2.57
3025 4189 5.384145 AGAAGACAATGGATGGATGACAT 57.616 39.130 0.00 0.00 44.18 3.06
3084 4251 2.045242 CCTCTCGACCGGACCTCA 60.045 66.667 9.46 0.00 0.00 3.86
3191 4369 2.590092 GCCAAGTAGGGGCGTGAT 59.410 61.111 0.00 0.00 42.39 3.06
3210 4394 1.352352 CTGCCCTCCTTTTCCTCTTCA 59.648 52.381 0.00 0.00 0.00 3.02
3269 8069 4.955774 GTCGCCAACACCGACCGT 62.956 66.667 2.79 0.00 46.78 4.83
3304 8104 1.228831 CCCACTCCAAATGCCACCA 60.229 57.895 0.00 0.00 0.00 4.17
3382 8215 1.891919 GCAACGAGTGGGAACAGCA 60.892 57.895 0.00 0.00 44.46 4.41
3387 8220 2.029964 GGACGCAACGAGTGGGAA 59.970 61.111 13.16 0.00 42.76 3.97
3397 8230 2.434185 GATGACGCAGGGACGCAA 60.434 61.111 0.00 0.00 36.19 4.85
3409 8242 0.744771 GCAGGGAACGAAGGGATGAC 60.745 60.000 0.00 0.00 0.00 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.