Multiple sequence alignment - TraesCS1B01G408200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G408200 chr1B 100.000 7704 0 0 1 7704 635919275 635926978 0.000000e+00 14227.0
1 TraesCS1B01G408200 chr1B 82.892 2268 254 72 4787 6980 669756957 669754750 0.000000e+00 1916.0
2 TraesCS1B01G408200 chr1B 89.846 1172 59 23 277 1397 635432353 635433515 0.000000e+00 1450.0
3 TraesCS1B01G408200 chr1B 92.966 725 42 7 1409 2127 635434826 635435547 0.000000e+00 1048.0
4 TraesCS1B01G408200 chr1B 82.882 1034 117 30 3516 4526 669758299 669757303 0.000000e+00 874.0
5 TraesCS1B01G408200 chr1B 86.370 719 82 11 2660 3365 669759298 669758583 0.000000e+00 771.0
6 TraesCS1B01G408200 chr1B 85.761 618 67 12 2024 2623 669759998 669759384 1.090000e-177 634.0
7 TraesCS1B01G408200 chr1B 98.039 357 7 0 2112 2468 635435733 635436089 8.490000e-174 621.0
8 TraesCS1B01G408200 chr1B 82.029 345 45 13 940 1267 669760854 669760510 2.120000e-70 278.0
9 TraesCS1B01G408200 chr1B 81.977 344 36 13 728 1064 669768799 669768475 1.270000e-67 268.0
10 TraesCS1B01G408200 chr1B 84.173 278 27 10 821 1091 669764587 669764320 3.570000e-63 254.0
11 TraesCS1B01G408200 chr1B 90.270 185 16 1 1 183 635400698 635400882 2.780000e-59 241.0
12 TraesCS1B01G408200 chr1D 96.704 2609 62 9 1811 4413 461903160 461905750 0.000000e+00 4320.0
13 TraesCS1B01G408200 chr1D 90.490 2471 158 36 4786 7211 461905808 461908246 0.000000e+00 3190.0
14 TraesCS1B01G408200 chr1D 83.736 1906 224 41 2660 4526 481388475 481386617 0.000000e+00 1724.0
15 TraesCS1B01G408200 chr1D 81.485 2128 240 81 4963 7021 481385974 481383932 0.000000e+00 1605.0
16 TraesCS1B01G408200 chr1D 88.834 806 49 15 628 1404 461902117 461902910 0.000000e+00 952.0
17 TraesCS1B01G408200 chr1D 85.922 618 63 16 2024 2630 481389152 481388548 8.430000e-179 638.0
18 TraesCS1B01G408200 chr1D 96.094 256 9 1 1549 1803 461902940 461903195 4.300000e-112 416.0
19 TraesCS1B01G408200 chr1D 90.333 300 15 3 4787 5072 481386269 481385970 1.570000e-101 381.0
20 TraesCS1B01G408200 chr1D 77.817 568 72 38 728 1267 481389993 481389452 1.260000e-77 302.0
21 TraesCS1B01G408200 chr1D 80.153 393 37 12 185 553 461901596 461901971 9.920000e-64 255.0
22 TraesCS1B01G408200 chr1D 96.875 32 1 0 4688 4719 461905741 461905772 4.000000e-03 54.7
23 TraesCS1B01G408200 chr1A 90.144 2912 167 43 4796 7655 553539877 553542720 0.000000e+00 3677.0
24 TraesCS1B01G408200 chr1A 86.031 1897 188 37 4787 6638 577842997 577841133 0.000000e+00 1964.0
25 TraesCS1B01G408200 chr1A 82.222 1755 220 45 2660 4376 577845140 577843440 0.000000e+00 1428.0
26 TraesCS1B01G408200 chr1A 89.003 1164 87 25 628 1768 553535614 553536759 0.000000e+00 1402.0
27 TraesCS1B01G408200 chr1A 90.193 622 42 8 1845 2463 553536757 553537362 0.000000e+00 793.0
28 TraesCS1B01G408200 chr1A 90.602 532 32 9 4195 4725 553539246 553539760 0.000000e+00 689.0
29 TraesCS1B01G408200 chr1A 84.711 641 63 15 3192 3801 553538165 553538801 6.610000e-170 608.0
30 TraesCS1B01G408200 chr1A 84.751 623 67 17 2024 2630 577845823 577845213 3.980000e-167 599.0
31 TraesCS1B01G408200 chr1A 90.884 362 27 2 3842 4197 553538805 553539166 1.500000e-131 481.0
32 TraesCS1B01G408200 chr1A 94.215 242 14 0 2860 3101 553537914 553538155 3.400000e-98 370.0
33 TraesCS1B01G408200 chr1A 85.674 356 37 6 4374 4727 577843337 577842994 5.680000e-96 363.0
34 TraesCS1B01G408200 chr1A 84.066 364 31 15 728 1085 577847013 577846671 7.460000e-85 326.0
35 TraesCS1B01G408200 chr1A 93.617 188 12 0 2660 2847 553537544 553537731 1.640000e-71 281.0
36 TraesCS1B01G408200 chr1A 78.610 187 32 6 1143 1328 577873423 577873244 4.880000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G408200 chr1B 635919275 635926978 7703 False 14227.000000 14227 100.000000 1 7704 1 chr1B.!!$F2 7703
1 TraesCS1B01G408200 chr1B 635432353 635436089 3736 False 1039.666667 1450 93.617000 277 2468 3 chr1B.!!$F3 2191
2 TraesCS1B01G408200 chr1B 669754750 669768799 14049 True 713.571429 1916 83.726286 728 6980 7 chr1B.!!$R1 6252
3 TraesCS1B01G408200 chr1D 461901596 461908246 6650 False 1531.283333 4320 91.525000 185 7211 6 chr1D.!!$F1 7026
4 TraesCS1B01G408200 chr1D 481383932 481389993 6061 True 930.000000 1724 83.858600 728 7021 5 chr1D.!!$R1 6293
5 TraesCS1B01G408200 chr1A 553535614 553542720 7106 False 1037.625000 3677 90.421125 628 7655 8 chr1A.!!$F1 7027
6 TraesCS1B01G408200 chr1A 577841133 577847013 5880 True 936.000000 1964 84.548800 728 6638 5 chr1A.!!$R2 5910

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
180 181 0.035725 GTTTCCCCCACTTCCCGTAG 60.036 60.0 0.00 0.0 0.00 3.51 F
1133 9023 0.250295 CTTTCTGTGTTCCCCTGCGA 60.250 55.0 0.00 0.0 0.00 5.10 F
1504 10760 0.389948 GTACTGTGCTTAGGCGTGCT 60.390 55.0 0.00 0.0 42.25 4.40 F
2051 11317 0.792640 CTTAGGACTTGCTGTGTGCG 59.207 55.0 0.00 0.0 46.63 5.34 F
3468 13359 1.254954 GTGTTACTCCCTCTGTCCGT 58.745 55.0 0.00 0.0 0.00 4.69 F
4740 15180 0.997363 TCTACTCCCTCTGTCCGGAA 59.003 55.0 5.23 0.0 0.00 4.30 F
4786 15226 0.179078 TACGCACTGAAACGGGTTGT 60.179 50.0 0.00 0.0 0.00 3.32 F
6444 17129 0.106708 ACGCCTGCTCTTCACTTGAA 59.893 50.0 0.00 0.0 0.00 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1568 10828 0.311790 ACACAAGCAAAGCACATCGG 59.688 50.000 0.00 0.0 0.00 4.18 R
2022 11288 2.481952 GCAAGTCCTAAGACACAGCAAG 59.518 50.000 0.00 0.0 46.15 4.01 R
3175 12888 3.980775 CAGTTGAATAACCAAGCAAACCG 59.019 43.478 0.00 0.0 37.52 4.44 R
3774 13681 5.108254 CGTTGCAAATTTAACAGTCAGCTTC 60.108 40.000 0.00 0.0 0.00 3.86 R
4767 15207 0.179078 ACAACCCGTTTCAGTGCGTA 60.179 50.000 0.00 0.0 0.00 4.42 R
6259 16939 0.454196 AAACAAAGCTGGCGTTCGTT 59.546 45.000 0.00 0.0 0.00 3.85 R
6624 17310 1.143838 CGGAAGACATGATCGGCCA 59.856 57.895 2.24 0.0 0.00 5.36 R
7683 18446 0.323725 ACCATGAAAGCTGGCCGAAT 60.324 50.000 0.00 0.0 37.27 3.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.084786 GTCCTCTCCAAAATCTTGTGGG 58.915 50.000 0.00 0.00 35.46 4.61
22 23 2.986019 TCCTCTCCAAAATCTTGTGGGA 59.014 45.455 0.00 0.00 35.46 4.37
23 24 3.593328 TCCTCTCCAAAATCTTGTGGGAT 59.407 43.478 0.00 0.00 35.46 3.85
24 25 4.044571 TCCTCTCCAAAATCTTGTGGGATT 59.955 41.667 0.00 0.00 37.51 3.01
25 26 4.774200 CCTCTCCAAAATCTTGTGGGATTT 59.226 41.667 0.00 0.00 44.66 2.17
26 27 5.105595 CCTCTCCAAAATCTTGTGGGATTTC 60.106 44.000 0.00 0.00 42.77 2.17
27 28 5.392995 TCTCCAAAATCTTGTGGGATTTCA 58.607 37.500 0.00 0.00 42.77 2.69
28 29 6.018469 TCTCCAAAATCTTGTGGGATTTCAT 58.982 36.000 0.00 0.00 42.77 2.57
29 30 6.040209 TCCAAAATCTTGTGGGATTTCATG 57.960 37.500 0.00 0.00 42.77 3.07
30 31 4.632688 CCAAAATCTTGTGGGATTTCATGC 59.367 41.667 3.45 0.00 42.77 4.06
31 32 4.476628 AAATCTTGTGGGATTTCATGCC 57.523 40.909 0.00 0.00 40.57 4.40
32 33 1.462616 TCTTGTGGGATTTCATGCCG 58.537 50.000 0.00 0.00 44.83 5.69
33 34 1.176527 CTTGTGGGATTTCATGCCGT 58.823 50.000 0.00 0.00 44.83 5.68
34 35 0.887247 TTGTGGGATTTCATGCCGTG 59.113 50.000 0.00 0.00 44.83 4.94
35 36 1.139520 GTGGGATTTCATGCCGTGC 59.860 57.895 0.00 0.00 44.83 5.34
36 37 2.051518 TGGGATTTCATGCCGTGCC 61.052 57.895 0.00 0.00 44.83 5.01
37 38 1.754234 GGGATTTCATGCCGTGCCT 60.754 57.895 0.00 0.00 0.00 4.75
38 39 1.322538 GGGATTTCATGCCGTGCCTT 61.323 55.000 0.00 0.00 0.00 4.35
39 40 0.179129 GGATTTCATGCCGTGCCTTG 60.179 55.000 0.00 0.00 0.00 3.61
40 41 0.810648 GATTTCATGCCGTGCCTTGA 59.189 50.000 0.00 0.00 0.00 3.02
41 42 1.406539 GATTTCATGCCGTGCCTTGAT 59.593 47.619 0.00 0.00 0.00 2.57
42 43 0.810648 TTTCATGCCGTGCCTTGATC 59.189 50.000 0.00 0.00 0.00 2.92
43 44 1.031571 TTCATGCCGTGCCTTGATCC 61.032 55.000 0.00 0.00 0.00 3.36
44 45 1.452651 CATGCCGTGCCTTGATCCT 60.453 57.895 0.00 0.00 0.00 3.24
45 46 1.033746 CATGCCGTGCCTTGATCCTT 61.034 55.000 0.00 0.00 0.00 3.36
46 47 1.033746 ATGCCGTGCCTTGATCCTTG 61.034 55.000 0.00 0.00 0.00 3.61
47 48 1.377202 GCCGTGCCTTGATCCTTGA 60.377 57.895 0.00 0.00 0.00 3.02
48 49 0.960364 GCCGTGCCTTGATCCTTGAA 60.960 55.000 0.00 0.00 0.00 2.69
49 50 1.089920 CCGTGCCTTGATCCTTGAAG 58.910 55.000 0.00 0.00 0.00 3.02
50 51 1.339055 CCGTGCCTTGATCCTTGAAGA 60.339 52.381 0.00 0.00 0.00 2.87
51 52 2.426522 CGTGCCTTGATCCTTGAAGAA 58.573 47.619 0.00 0.00 0.00 2.52
52 53 2.813754 CGTGCCTTGATCCTTGAAGAAA 59.186 45.455 0.00 0.00 0.00 2.52
53 54 3.253188 CGTGCCTTGATCCTTGAAGAAAA 59.747 43.478 0.00 0.00 0.00 2.29
54 55 4.261572 CGTGCCTTGATCCTTGAAGAAAAA 60.262 41.667 0.00 0.00 0.00 1.94
55 56 4.984785 GTGCCTTGATCCTTGAAGAAAAAC 59.015 41.667 0.00 0.00 0.00 2.43
56 57 4.039124 TGCCTTGATCCTTGAAGAAAAACC 59.961 41.667 0.00 0.00 0.00 3.27
57 58 4.281941 GCCTTGATCCTTGAAGAAAAACCT 59.718 41.667 0.00 0.00 0.00 3.50
58 59 5.476945 GCCTTGATCCTTGAAGAAAAACCTA 59.523 40.000 0.00 0.00 0.00 3.08
59 60 6.349694 GCCTTGATCCTTGAAGAAAAACCTAG 60.350 42.308 0.00 0.00 0.00 3.02
60 61 6.349694 CCTTGATCCTTGAAGAAAAACCTAGC 60.350 42.308 0.00 0.00 0.00 3.42
61 62 5.630121 TGATCCTTGAAGAAAAACCTAGCA 58.370 37.500 0.00 0.00 0.00 3.49
62 63 6.248433 TGATCCTTGAAGAAAAACCTAGCAT 58.752 36.000 0.00 0.00 0.00 3.79
63 64 5.964958 TCCTTGAAGAAAAACCTAGCATG 57.035 39.130 0.00 0.00 0.00 4.06
64 65 4.766891 TCCTTGAAGAAAAACCTAGCATGG 59.233 41.667 0.00 0.00 0.00 3.66
65 66 4.082026 CCTTGAAGAAAAACCTAGCATGGG 60.082 45.833 0.00 0.00 45.72 4.00
66 67 2.825532 TGAAGAAAAACCTAGCATGGGC 59.174 45.455 0.00 0.00 42.80 5.36
67 68 2.603075 AGAAAAACCTAGCATGGGCA 57.397 45.000 0.00 0.00 42.80 5.36
68 69 2.450476 AGAAAAACCTAGCATGGGCAG 58.550 47.619 0.00 0.00 42.80 4.85
69 70 2.171003 GAAAAACCTAGCATGGGCAGT 58.829 47.619 0.00 0.00 42.80 4.40
70 71 1.549203 AAAACCTAGCATGGGCAGTG 58.451 50.000 0.00 0.00 42.80 3.66
71 72 0.967380 AAACCTAGCATGGGCAGTGC 60.967 55.000 6.55 6.55 42.80 4.40
72 73 2.141011 AACCTAGCATGGGCAGTGCA 62.141 55.000 18.61 0.00 42.80 4.57
73 74 1.378911 CCTAGCATGGGCAGTGCAA 60.379 57.895 18.61 4.64 44.87 4.08
74 75 0.754217 CCTAGCATGGGCAGTGCAAT 60.754 55.000 18.61 7.10 44.87 3.56
75 76 0.384309 CTAGCATGGGCAGTGCAATG 59.616 55.000 18.61 19.60 44.87 2.82
76 77 1.038681 TAGCATGGGCAGTGCAATGG 61.039 55.000 23.72 10.74 44.87 3.16
77 78 2.352821 GCATGGGCAGTGCAATGGA 61.353 57.895 23.72 3.39 42.08 3.41
78 79 1.890625 GCATGGGCAGTGCAATGGAA 61.891 55.000 23.72 3.38 42.08 3.53
79 80 0.108520 CATGGGCAGTGCAATGGAAC 60.109 55.000 18.61 0.00 0.00 3.62
80 81 1.259840 ATGGGCAGTGCAATGGAACC 61.260 55.000 18.61 8.50 0.00 3.62
81 82 2.649129 GGGCAGTGCAATGGAACCC 61.649 63.158 18.61 14.05 0.00 4.11
82 83 2.649129 GGCAGTGCAATGGAACCCC 61.649 63.158 18.61 4.05 0.00 4.95
104 105 3.724508 AAAAACACGCCACATTGATCA 57.275 38.095 0.00 0.00 0.00 2.92
105 106 3.724508 AAAACACGCCACATTGATCAA 57.275 38.095 11.26 11.26 0.00 2.57
106 107 3.940209 AAACACGCCACATTGATCAAT 57.060 38.095 15.36 15.36 0.00 2.57
107 108 3.940209 AACACGCCACATTGATCAATT 57.060 38.095 18.41 7.62 0.00 2.32
108 109 3.940209 ACACGCCACATTGATCAATTT 57.060 38.095 18.41 9.81 0.00 1.82
109 110 3.577667 ACACGCCACATTGATCAATTTG 58.422 40.909 22.35 22.35 0.00 2.32
110 111 3.255395 ACACGCCACATTGATCAATTTGA 59.745 39.130 28.23 0.75 31.91 2.69
111 112 3.609373 CACGCCACATTGATCAATTTGAC 59.391 43.478 28.23 19.53 31.91 3.18
112 113 3.255395 ACGCCACATTGATCAATTTGACA 59.745 39.130 28.23 0.00 31.91 3.58
113 114 4.082081 ACGCCACATTGATCAATTTGACAT 60.082 37.500 28.23 9.47 31.91 3.06
114 115 4.266739 CGCCACATTGATCAATTTGACATG 59.733 41.667 28.23 16.15 31.91 3.21
115 116 4.033587 GCCACATTGATCAATTTGACATGC 59.966 41.667 28.23 20.66 31.91 4.06
116 117 5.172205 CCACATTGATCAATTTGACATGCA 58.828 37.500 28.23 0.00 31.91 3.96
117 118 5.062934 CCACATTGATCAATTTGACATGCAC 59.937 40.000 28.23 0.00 31.91 4.57
118 119 5.635700 CACATTGATCAATTTGACATGCACA 59.364 36.000 24.18 0.00 31.91 4.57
119 120 6.146347 CACATTGATCAATTTGACATGCACAA 59.854 34.615 24.18 0.00 31.91 3.33
120 121 6.367695 ACATTGATCAATTTGACATGCACAAG 59.632 34.615 18.41 4.85 0.00 3.16
121 122 5.708877 TGATCAATTTGACATGCACAAGA 57.291 34.783 0.15 0.00 0.00 3.02
122 123 6.275494 TGATCAATTTGACATGCACAAGAT 57.725 33.333 0.15 0.00 0.00 2.40
123 124 6.096695 TGATCAATTTGACATGCACAAGATG 58.903 36.000 0.15 3.80 0.00 2.90
141 142 9.264719 CACAAGATGCATTGTATCTAACTATGA 57.735 33.333 16.28 0.00 41.99 2.15
142 143 9.836864 ACAAGATGCATTGTATCTAACTATGAA 57.163 29.630 16.28 0.00 41.99 2.57
153 154 9.533831 TGTATCTAACTATGAATCTAGATGCCA 57.466 33.333 5.86 8.18 34.46 4.92
155 156 8.891985 ATCTAACTATGAATCTAGATGCCAGA 57.108 34.615 5.86 4.46 31.43 3.86
156 157 8.891985 TCTAACTATGAATCTAGATGCCAGAT 57.108 34.615 5.86 2.12 34.15 2.90
157 158 9.319060 TCTAACTATGAATCTAGATGCCAGATT 57.681 33.333 5.86 6.44 43.71 2.40
162 163 5.226194 GAATCTAGATGCCAGATTCCAGT 57.774 43.478 5.86 0.00 46.75 4.00
163 164 5.619220 GAATCTAGATGCCAGATTCCAGTT 58.381 41.667 5.86 0.00 46.75 3.16
164 165 5.643421 ATCTAGATGCCAGATTCCAGTTT 57.357 39.130 3.89 0.00 28.01 2.66
165 166 5.028549 TCTAGATGCCAGATTCCAGTTTC 57.971 43.478 0.00 0.00 0.00 2.78
166 167 3.010200 AGATGCCAGATTCCAGTTTCC 57.990 47.619 0.00 0.00 0.00 3.13
167 168 2.027385 GATGCCAGATTCCAGTTTCCC 58.973 52.381 0.00 0.00 0.00 3.97
168 169 0.039618 TGCCAGATTCCAGTTTCCCC 59.960 55.000 0.00 0.00 0.00 4.81
169 170 0.684479 GCCAGATTCCAGTTTCCCCC 60.684 60.000 0.00 0.00 0.00 5.40
170 171 0.704076 CCAGATTCCAGTTTCCCCCA 59.296 55.000 0.00 0.00 0.00 4.96
171 172 1.616994 CCAGATTCCAGTTTCCCCCAC 60.617 57.143 0.00 0.00 0.00 4.61
172 173 1.355720 CAGATTCCAGTTTCCCCCACT 59.644 52.381 0.00 0.00 0.00 4.00
173 174 2.073776 AGATTCCAGTTTCCCCCACTT 58.926 47.619 0.00 0.00 0.00 3.16
174 175 2.041755 AGATTCCAGTTTCCCCCACTTC 59.958 50.000 0.00 0.00 0.00 3.01
175 176 0.481128 TTCCAGTTTCCCCCACTTCC 59.519 55.000 0.00 0.00 0.00 3.46
176 177 1.076727 CCAGTTTCCCCCACTTCCC 59.923 63.158 0.00 0.00 0.00 3.97
177 178 1.303317 CAGTTTCCCCCACTTCCCG 60.303 63.158 0.00 0.00 0.00 5.14
178 179 1.772979 AGTTTCCCCCACTTCCCGT 60.773 57.895 0.00 0.00 0.00 5.28
179 180 0.474273 AGTTTCCCCCACTTCCCGTA 60.474 55.000 0.00 0.00 0.00 4.02
180 181 0.035725 GTTTCCCCCACTTCCCGTAG 60.036 60.000 0.00 0.00 0.00 3.51
181 182 1.844544 TTTCCCCCACTTCCCGTAGC 61.845 60.000 0.00 0.00 0.00 3.58
182 183 3.006728 CCCCCACTTCCCGTAGCA 61.007 66.667 0.00 0.00 0.00 3.49
183 184 2.375345 CCCCCACTTCCCGTAGCAT 61.375 63.158 0.00 0.00 0.00 3.79
184 185 1.153168 CCCCACTTCCCGTAGCATG 60.153 63.158 0.00 0.00 0.00 4.06
185 186 1.622607 CCCCACTTCCCGTAGCATGA 61.623 60.000 0.00 0.00 0.00 3.07
186 187 0.251916 CCCACTTCCCGTAGCATGAA 59.748 55.000 0.00 0.00 0.00 2.57
187 188 1.134098 CCCACTTCCCGTAGCATGAAT 60.134 52.381 0.00 0.00 0.00 2.57
188 189 2.213499 CCACTTCCCGTAGCATGAATC 58.787 52.381 0.00 0.00 0.00 2.52
189 190 2.158900 CCACTTCCCGTAGCATGAATCT 60.159 50.000 0.00 0.00 0.00 2.40
190 191 3.069586 CCACTTCCCGTAGCATGAATCTA 59.930 47.826 0.00 0.00 0.00 1.98
191 192 4.302455 CACTTCCCGTAGCATGAATCTAG 58.698 47.826 0.00 0.00 0.00 2.43
192 193 4.038042 CACTTCCCGTAGCATGAATCTAGA 59.962 45.833 0.00 0.00 0.00 2.43
193 194 4.835615 ACTTCCCGTAGCATGAATCTAGAT 59.164 41.667 0.00 0.00 0.00 1.98
194 195 4.790765 TCCCGTAGCATGAATCTAGATG 57.209 45.455 5.86 0.00 0.00 2.90
195 196 3.056536 TCCCGTAGCATGAATCTAGATGC 60.057 47.826 5.86 4.59 44.49 3.91
221 222 1.303317 CAGTTTCCCCCACTTCCCG 60.303 63.158 0.00 0.00 0.00 5.14
239 240 1.162181 CGTAGCAGATGCCCATGGTG 61.162 60.000 11.73 2.67 43.38 4.17
252 253 2.613474 CCCATGGTGCCATTGTGAAAAG 60.613 50.000 11.73 0.00 33.90 2.27
258 259 2.622942 GTGCCATTGTGAAAAGTCTCCA 59.377 45.455 0.00 0.00 0.00 3.86
261 262 3.569701 GCCATTGTGAAAAGTCTCCAAGA 59.430 43.478 0.00 0.00 0.00 3.02
336 351 4.371590 TTGCGCGCTCCACTGCTA 62.372 61.111 33.29 5.03 0.00 3.49
533 558 1.265454 GGAGGGGAATGGACGACAGT 61.265 60.000 0.00 0.00 0.00 3.55
553 578 1.007964 CGGTGCAACGCAATTTCCA 60.008 52.632 13.03 0.00 41.47 3.53
554 579 0.596083 CGGTGCAACGCAATTTCCAA 60.596 50.000 13.03 0.00 41.47 3.53
575 600 4.574599 AAAAATGAAACAAGCGCTCTCT 57.425 36.364 12.06 0.00 0.00 3.10
578 630 4.935885 AATGAAACAAGCGCTCTCTTAG 57.064 40.909 12.06 0.00 0.00 2.18
702 797 3.075005 ACAGGCGATGCGTAGGGT 61.075 61.111 0.00 0.00 0.00 4.34
959 5209 2.301870 AGCGAGTGGTCAAATCACCTTA 59.698 45.455 0.00 0.00 37.34 2.69
1133 9023 0.250295 CTTTCTGTGTTCCCCTGCGA 60.250 55.000 0.00 0.00 0.00 5.10
1164 9056 3.433740 GCCTCCGAGGGTTAGAATTGAAT 60.434 47.826 16.51 0.00 35.37 2.57
1166 9058 4.816925 CCTCCGAGGGTTAGAATTGAATTC 59.183 45.833 9.82 9.82 39.56 2.17
1187 9079 1.169661 GCGGTGGATTTGTGTGGTCA 61.170 55.000 0.00 0.00 0.00 4.02
1188 9080 1.533625 CGGTGGATTTGTGTGGTCAT 58.466 50.000 0.00 0.00 0.00 3.06
1291 9190 6.405731 CCTGTCACTTTTCTTTTTGGTGATGA 60.406 38.462 0.00 0.00 38.80 2.92
1297 9196 8.720562 CACTTTTCTTTTTGGTGATGAAAAAGT 58.279 29.630 14.25 0.00 44.98 2.66
1371 9301 6.348213 CGAATTGTTGATATACCGGGGAAATC 60.348 42.308 6.32 3.84 0.00 2.17
1400 10616 4.076394 AGCCTTTTACCGATGCAAGTTTA 58.924 39.130 0.00 0.00 0.00 2.01
1404 10620 6.367695 GCCTTTTACCGATGCAAGTTTATTTT 59.632 34.615 0.00 0.00 0.00 1.82
1405 10621 7.621219 GCCTTTTACCGATGCAAGTTTATTTTG 60.621 37.037 0.00 0.00 0.00 2.44
1406 10622 7.596995 CCTTTTACCGATGCAAGTTTATTTTGA 59.403 33.333 0.00 0.00 0.00 2.69
1419 10650 2.877043 ATTTTGATGCGATGGCCTTC 57.123 45.000 3.32 6.40 38.85 3.46
1469 10722 3.288092 GAACTGTGAGGTTCTGGGTTTT 58.712 45.455 0.00 0.00 41.44 2.43
1474 10727 1.144913 TGAGGTTCTGGGTTTTGGGAG 59.855 52.381 0.00 0.00 0.00 4.30
1485 10741 4.019681 TGGGTTTTGGGAGTAGAGTATGTG 60.020 45.833 0.00 0.00 0.00 3.21
1486 10742 4.019591 GGGTTTTGGGAGTAGAGTATGTGT 60.020 45.833 0.00 0.00 0.00 3.72
1489 10745 6.070938 GGTTTTGGGAGTAGAGTATGTGTACT 60.071 42.308 0.00 0.00 43.76 2.73
1492 10748 4.948004 TGGGAGTAGAGTATGTGTACTGTG 59.052 45.833 0.00 0.00 41.19 3.66
1493 10749 4.202030 GGGAGTAGAGTATGTGTACTGTGC 60.202 50.000 0.00 0.00 41.19 4.57
1494 10750 4.641094 GGAGTAGAGTATGTGTACTGTGCT 59.359 45.833 3.67 3.67 45.41 4.40
1504 10760 0.389948 GTACTGTGCTTAGGCGTGCT 60.390 55.000 0.00 0.00 42.25 4.40
1546 10806 8.831715 AATGTTCAAGTGATAATTTGGAAACC 57.168 30.769 0.00 0.00 0.00 3.27
1568 10828 3.551485 CAGTGGCAGTTTTTGTTGCTTAC 59.449 43.478 0.00 0.00 40.15 2.34
1842 11106 1.926511 CTTAGTTGGGCTGCGGCAAG 61.927 60.000 21.31 9.26 40.87 4.01
2022 11288 3.818773 TCCAAGTGTTAGCAAAACCTAGC 59.181 43.478 0.13 0.00 0.00 3.42
2051 11317 0.792640 CTTAGGACTTGCTGTGTGCG 59.207 55.000 0.00 0.00 46.63 5.34
2107 11379 5.363292 GGGGTAACAGTTTTCAGGGTTTTAA 59.637 40.000 0.00 0.00 39.74 1.52
2499 11981 9.932207 TTATTTGTGCTTTCATGATTCATTTCT 57.068 25.926 0.00 0.00 0.00 2.52
2842 12383 5.882557 CCTATTGTGTAACTTGGATTCTGCT 59.117 40.000 0.00 0.00 38.04 4.24
2916 12627 9.739276 AACATCTGTACTTCCAAATTCTATTGA 57.261 29.630 0.00 0.00 31.84 2.57
2990 12701 6.387465 CATGTTCTCATTTGTGCTTCTTGAT 58.613 36.000 0.00 0.00 31.15 2.57
3175 12888 8.603242 TTTATCTTGTTCTGGACTTTCTGTAC 57.397 34.615 0.00 0.00 0.00 2.90
3268 12981 7.545265 TGCATGTAGGTTCATTTAAATTCAAGC 59.455 33.333 0.00 4.59 0.00 4.01
3330 13049 7.577303 TCATTAGATTAGAATTGGACAAGGCT 58.423 34.615 0.00 0.00 0.00 4.58
3468 13359 1.254954 GTGTTACTCCCTCTGTCCGT 58.745 55.000 0.00 0.00 0.00 4.69
3480 13371 3.322254 CCTCTGTCCGTATTGATAAGGCT 59.678 47.826 0.00 0.00 32.79 4.58
3617 13510 4.391405 TGTGTCACATAGCTCATGTAGG 57.609 45.455 0.18 0.00 46.47 3.18
3745 13652 2.092838 GTGCAACTAGAACGTCTGATGC 59.907 50.000 0.00 0.00 30.39 3.91
3753 13660 2.093973 AGAACGTCTGATGCGGAAGATT 60.094 45.455 0.00 0.00 0.00 2.40
4059 13969 2.064762 GATTGCGAGCGCTTCATATCT 58.935 47.619 13.26 0.00 42.51 1.98
4245 14252 7.495934 TGCCTACTAATCTGCTTTCTAACATTC 59.504 37.037 0.00 0.00 0.00 2.67
4249 14256 8.136057 ACTAATCTGCTTTCTAACATTCATCG 57.864 34.615 0.00 0.00 0.00 3.84
4363 14371 4.716003 AGGCACGCCTTTCCTTAC 57.284 55.556 4.27 0.00 45.70 2.34
4366 14374 2.322081 GCACGCCTTTCCTTACGCA 61.322 57.895 0.00 0.00 0.00 5.24
4367 14375 1.847890 GCACGCCTTTCCTTACGCAA 61.848 55.000 0.00 0.00 0.00 4.85
4380 14493 6.417191 TCCTTACGCAATCTGTTACATTTC 57.583 37.500 0.00 0.00 0.00 2.17
4381 14494 5.062934 TCCTTACGCAATCTGTTACATTTCG 59.937 40.000 0.00 0.00 0.00 3.46
4467 14584 8.086851 TGTTTCATGTTGATATGATGTATCCG 57.913 34.615 0.00 0.00 36.97 4.18
4555 14993 1.065926 TGTAGCTCCCTGCAATCACAG 60.066 52.381 0.00 0.00 45.94 3.66
4561 14999 3.614092 CTCCCTGCAATCACAGTTATGT 58.386 45.455 0.00 0.00 41.57 2.29
4562 15000 3.609853 TCCCTGCAATCACAGTTATGTC 58.390 45.455 0.00 0.00 37.65 3.06
4563 15001 3.264193 TCCCTGCAATCACAGTTATGTCT 59.736 43.478 0.00 0.00 37.65 3.41
4564 15002 4.012374 CCCTGCAATCACAGTTATGTCTT 58.988 43.478 0.00 0.00 37.65 3.01
4565 15003 5.045942 TCCCTGCAATCACAGTTATGTCTTA 60.046 40.000 0.00 0.00 37.65 2.10
4566 15004 5.295292 CCCTGCAATCACAGTTATGTCTTAG 59.705 44.000 0.00 0.00 37.65 2.18
4567 15005 6.108687 CCTGCAATCACAGTTATGTCTTAGA 58.891 40.000 0.00 0.00 37.65 2.10
4568 15006 6.036517 CCTGCAATCACAGTTATGTCTTAGAC 59.963 42.308 5.27 5.27 37.65 2.59
4622 15060 6.483307 TCTTAGACAGATGGCATTTTATTCGG 59.517 38.462 0.00 0.00 0.00 4.30
4636 15075 8.430063 GCATTTTATTCGGAATCATGCTAATTG 58.570 33.333 22.71 9.51 0.00 2.32
4730 15170 9.584008 TTTCTTTACGTATATCATCTACTCCCT 57.416 33.333 0.00 0.00 0.00 4.20
4731 15171 8.789825 TCTTTACGTATATCATCTACTCCCTC 57.210 38.462 0.00 0.00 0.00 4.30
4733 15173 8.563123 TTTACGTATATCATCTACTCCCTCTG 57.437 38.462 0.00 0.00 0.00 3.35
4737 15177 2.350057 TCATCTACTCCCTCTGTCCG 57.650 55.000 0.00 0.00 0.00 4.79
4738 15178 1.133761 TCATCTACTCCCTCTGTCCGG 60.134 57.143 0.00 0.00 0.00 5.14
4740 15180 0.997363 TCTACTCCCTCTGTCCGGAA 59.003 55.000 5.23 0.00 0.00 4.30
4742 15182 2.024273 TCTACTCCCTCTGTCCGGAATT 60.024 50.000 5.23 0.00 0.00 2.17
4743 15183 2.544844 ACTCCCTCTGTCCGGAATTA 57.455 50.000 5.23 0.00 0.00 1.40
4745 15185 2.500504 ACTCCCTCTGTCCGGAATTAAC 59.499 50.000 5.23 0.00 0.00 2.01
4746 15186 2.766828 CTCCCTCTGTCCGGAATTAACT 59.233 50.000 5.23 0.00 0.00 2.24
4747 15187 2.500098 TCCCTCTGTCCGGAATTAACTG 59.500 50.000 5.23 0.00 0.00 3.16
4748 15188 2.236395 CCCTCTGTCCGGAATTAACTGT 59.764 50.000 5.23 0.00 0.00 3.55
4749 15189 3.522553 CCTCTGTCCGGAATTAACTGTC 58.477 50.000 5.23 0.00 0.00 3.51
4754 15194 3.056678 TGTCCGGAATTAACTGTCGCTAA 60.057 43.478 5.23 0.00 0.00 3.09
4755 15195 3.928375 GTCCGGAATTAACTGTCGCTAAA 59.072 43.478 5.23 0.00 0.00 1.85
4758 15198 5.064198 TCCGGAATTAACTGTCGCTAAAATG 59.936 40.000 0.00 0.00 0.00 2.32
4759 15199 5.064198 CCGGAATTAACTGTCGCTAAAATGA 59.936 40.000 0.00 0.00 0.00 2.57
4761 15201 6.183360 CGGAATTAACTGTCGCTAAAATGAGT 60.183 38.462 0.00 0.00 0.00 3.41
4762 15202 6.961554 GGAATTAACTGTCGCTAAAATGAGTG 59.038 38.462 0.00 0.00 0.00 3.51
4763 15203 7.360946 GGAATTAACTGTCGCTAAAATGAGTGT 60.361 37.037 0.00 0.00 0.00 3.55
4764 15204 8.542497 AATTAACTGTCGCTAAAATGAGTGTA 57.458 30.769 0.00 0.00 0.00 2.90
4765 15205 8.718102 ATTAACTGTCGCTAAAATGAGTGTAT 57.282 30.769 0.00 0.00 0.00 2.29
4766 15206 6.648725 AACTGTCGCTAAAATGAGTGTATC 57.351 37.500 0.00 0.00 0.00 2.24
4767 15207 5.967088 ACTGTCGCTAAAATGAGTGTATCT 58.033 37.500 0.00 0.00 0.00 1.98
4768 15208 7.096884 ACTGTCGCTAAAATGAGTGTATCTA 57.903 36.000 0.00 0.00 0.00 1.98
4770 15210 5.969435 TGTCGCTAAAATGAGTGTATCTACG 59.031 40.000 0.00 0.00 0.00 3.51
4771 15211 4.974275 TCGCTAAAATGAGTGTATCTACGC 59.026 41.667 0.00 0.00 36.98 4.42
4772 15212 4.738252 CGCTAAAATGAGTGTATCTACGCA 59.262 41.667 3.94 0.00 39.08 5.24
4773 15213 5.331607 CGCTAAAATGAGTGTATCTACGCAC 60.332 44.000 3.94 0.00 39.08 5.34
4775 15215 6.291849 GCTAAAATGAGTGTATCTACGCACTG 60.292 42.308 1.71 0.00 44.89 3.66
4776 15216 4.983671 AATGAGTGTATCTACGCACTGA 57.016 40.909 1.71 0.00 44.89 3.41
4779 15219 4.482386 TGAGTGTATCTACGCACTGAAAC 58.518 43.478 1.71 0.00 44.89 2.78
4780 15220 3.499048 AGTGTATCTACGCACTGAAACG 58.501 45.455 3.94 0.00 43.45 3.60
4781 15221 2.597305 GTGTATCTACGCACTGAAACGG 59.403 50.000 0.00 0.00 36.73 4.44
4782 15222 2.190981 GTATCTACGCACTGAAACGGG 58.809 52.381 0.00 0.00 0.00 5.28
4784 15224 0.390124 TCTACGCACTGAAACGGGTT 59.610 50.000 0.00 0.00 0.00 4.11
4785 15225 0.511221 CTACGCACTGAAACGGGTTG 59.489 55.000 0.00 0.00 0.00 3.77
4786 15226 0.179078 TACGCACTGAAACGGGTTGT 60.179 50.000 0.00 0.00 0.00 3.32
4988 15474 5.543507 TTTGCATTGGTTTGAAGGTACAT 57.456 34.783 0.00 0.00 0.00 2.29
5030 15635 4.514441 GGTGTATCTCCATTGCTGAGAATG 59.486 45.833 0.00 0.00 41.87 2.67
5068 15686 8.089115 AGTTGTTTTCTTGCTCTTATGAGTAC 57.911 34.615 7.41 0.00 42.13 2.73
5148 15767 5.838529 TGATAGAAGTTCTGACACGTTTCA 58.161 37.500 15.90 4.06 0.00 2.69
5165 15784 6.019398 CACGTTTCAAATTTTTGTAGGGTTCC 60.019 38.462 3.18 0.00 39.18 3.62
5246 15865 1.160329 ACTTCACAGTGCAGGTTCGC 61.160 55.000 5.14 0.00 0.00 4.70
5283 15903 5.055812 CCTTTGCATAGAGGAAGAGACATC 58.944 45.833 5.65 0.00 34.91 3.06
5284 15904 5.396101 CCTTTGCATAGAGGAAGAGACATCA 60.396 44.000 5.65 0.00 34.91 3.07
5358 15978 9.860898 GCTTTGGAAGAAGTTATTTATCACATT 57.139 29.630 0.00 0.00 0.00 2.71
5633 16258 7.418337 ACTTATTTGAGTTGTTTTTCCTGGT 57.582 32.000 0.00 0.00 0.00 4.00
5717 16342 2.202492 CTCGAGGCTCGTGTTCCG 60.202 66.667 33.31 9.98 41.35 4.30
5767 16392 1.059913 ATGGACCTGGATCCGGAATC 58.940 55.000 23.02 17.61 42.24 2.52
5821 16446 7.533289 ACCCTAATTTCACTCTAGCTCTATC 57.467 40.000 0.00 0.00 0.00 2.08
5953 16585 4.336889 TGATGAGAAGCCCTATTTACCG 57.663 45.455 0.00 0.00 0.00 4.02
5981 16613 7.394641 AGGTTGGAGAAGTTCATCCTTTTATTC 59.605 37.037 17.11 0.00 36.50 1.75
5986 16629 8.797438 GGAGAAGTTCATCCTTTTATTCTGTTT 58.203 33.333 5.50 0.00 32.51 2.83
6007 16661 7.432869 TGTTTTATTTGCTCTGTTACTTGCAT 58.567 30.769 0.00 0.00 35.27 3.96
6008 16662 7.381948 TGTTTTATTTGCTCTGTTACTTGCATG 59.618 33.333 0.00 0.00 35.27 4.06
6016 16671 1.197492 TGTTACTTGCATGAGCTTGCG 59.803 47.619 6.60 0.00 45.77 4.85
6020 16675 0.728129 CTTGCATGAGCTTGCGTGTG 60.728 55.000 5.94 0.00 45.77 3.82
6033 16688 1.002366 GCGTGTGTGCTCATAAGGAG 58.998 55.000 0.00 0.00 46.93 3.69
6209 16887 0.800012 TTTATTCGACTTGCGCCCAC 59.200 50.000 4.18 0.00 40.61 4.61
6259 16939 5.189539 TGTTCAGGTGTCAGATTCCATGATA 59.810 40.000 0.00 0.00 0.00 2.15
6436 17121 4.584327 AAAAACATTAACGCCTGCTCTT 57.416 36.364 0.00 0.00 0.00 2.85
6444 17129 0.106708 ACGCCTGCTCTTCACTTGAA 59.893 50.000 0.00 0.00 0.00 2.69
6459 17145 9.195411 TCTTCACTTGAATAACAATTCAATTGC 57.805 29.630 18.73 0.00 45.89 3.56
6562 17248 2.119611 TCCAAGCTCCTCGACCCA 59.880 61.111 0.00 0.00 0.00 4.51
6633 17319 3.664025 CTCCTGCGTTGGCCGATCA 62.664 63.158 0.00 0.00 39.56 2.92
6756 17463 5.985781 TGAGAAAATGTTGTCGCTTAGTTC 58.014 37.500 0.00 0.00 29.54 3.01
6808 17522 8.457261 AGCTTCAATCATTCAGTGTAGAAATTC 58.543 33.333 0.00 0.00 0.00 2.17
6885 17608 6.163476 TGTACTAAGTTTATGTGGTGAGCAG 58.837 40.000 0.00 0.00 0.00 4.24
7000 17731 9.912634 ATGTTGGTTTCTGTATTAGTTGATTTG 57.087 29.630 0.00 0.00 0.00 2.32
7034 17765 8.112099 GCTCATGTTAGCATTATCAACTTTTG 57.888 34.615 1.66 0.00 42.30 2.44
7043 17774 5.334802 GCATTATCAACTTTTGTTTTGGGGC 60.335 40.000 0.00 0.00 41.35 5.80
7070 17805 1.813862 CGGCACTCCCAAGTCTGAAAA 60.814 52.381 0.00 0.00 31.71 2.29
7075 17810 4.392940 CACTCCCAAGTCTGAAAACTCAT 58.607 43.478 0.00 0.00 31.71 2.90
7076 17811 5.551233 CACTCCCAAGTCTGAAAACTCATA 58.449 41.667 0.00 0.00 31.71 2.15
7077 17812 5.997746 CACTCCCAAGTCTGAAAACTCATAA 59.002 40.000 0.00 0.00 31.71 1.90
7078 17813 6.486657 CACTCCCAAGTCTGAAAACTCATAAA 59.513 38.462 0.00 0.00 31.71 1.40
7079 17814 6.486993 ACTCCCAAGTCTGAAAACTCATAAAC 59.513 38.462 0.00 0.00 0.00 2.01
7080 17815 5.768164 TCCCAAGTCTGAAAACTCATAAACC 59.232 40.000 0.00 0.00 0.00 3.27
7081 17816 5.334879 CCCAAGTCTGAAAACTCATAAACCG 60.335 44.000 0.00 0.00 0.00 4.44
7082 17817 5.147162 CAAGTCTGAAAACTCATAAACCGC 58.853 41.667 0.00 0.00 0.00 5.68
7083 17818 3.432252 AGTCTGAAAACTCATAAACCGCG 59.568 43.478 0.00 0.00 0.00 6.46
7122 17857 8.991026 TGAAATTTTTCAAAATCAGTGGCATAG 58.009 29.630 3.31 0.00 43.62 2.23
7135 17870 6.993079 TCAGTGGCATAGACATACGAATATT 58.007 36.000 0.00 0.00 0.00 1.28
7141 17876 8.244113 TGGCATAGACATACGAATATTAGTCAG 58.756 37.037 4.33 2.23 0.00 3.51
7142 17877 7.702772 GGCATAGACATACGAATATTAGTCAGG 59.297 40.741 4.33 0.00 0.00 3.86
7150 17885 8.755941 CATACGAATATTAGTCAGGTCACAAAG 58.244 37.037 4.33 0.00 0.00 2.77
7162 17897 6.874134 GTCAGGTCACAAAGTATCAAGTATGT 59.126 38.462 0.00 0.00 0.00 2.29
7205 17940 5.776173 TTCAACGTGGTTGGTATTCAATT 57.224 34.783 8.47 0.00 42.99 2.32
7220 17974 9.295825 TGGTATTCAATTTCATCAACTGTAACT 57.704 29.630 0.00 0.00 0.00 2.24
7221 17975 9.559958 GGTATTCAATTTCATCAACTGTAACTG 57.440 33.333 0.00 0.00 0.00 3.16
7260 18014 3.218453 TGAAATTGGCGAAACTCTTCCA 58.782 40.909 0.00 0.00 0.00 3.53
7266 18020 2.301870 TGGCGAAACTCTTCCATGTACT 59.698 45.455 0.00 0.00 0.00 2.73
7320 18080 4.387598 CAAAGGGTGGATGCAAAAATGAA 58.612 39.130 0.00 0.00 0.00 2.57
7329 18089 5.642919 TGGATGCAAAAATGAAATTACAGCC 59.357 36.000 0.00 0.00 33.67 4.85
7334 18094 7.665690 TGCAAAAATGAAATTACAGCCTTCTA 58.334 30.769 0.00 0.00 33.67 2.10
7396 18156 4.804139 AGGTTATGCGTCTTACAAATCTCG 59.196 41.667 0.00 0.00 0.00 4.04
7413 18173 5.867903 ATCTCGAGAGAAGATCACCAATT 57.132 39.130 21.52 0.00 41.36 2.32
7437 18197 3.096092 AGAACAGGCAAAAAGACACCAA 58.904 40.909 0.00 0.00 0.00 3.67
7438 18198 3.513515 AGAACAGGCAAAAAGACACCAAA 59.486 39.130 0.00 0.00 0.00 3.28
7448 18211 6.906678 GCAAAAAGACACCAAAAATGCTAAAG 59.093 34.615 0.00 0.00 0.00 1.85
7453 18216 7.112452 AGACACCAAAAATGCTAAAGAAAGT 57.888 32.000 0.00 0.00 0.00 2.66
7463 18226 3.807622 TGCTAAAGAAAGTCACCACGAAG 59.192 43.478 0.00 0.00 0.00 3.79
7466 18229 3.746045 AAGAAAGTCACCACGAAGCTA 57.254 42.857 0.00 0.00 0.00 3.32
7468 18231 2.067013 GAAAGTCACCACGAAGCTACC 58.933 52.381 0.00 0.00 0.00 3.18
7482 18245 5.298276 ACGAAGCTACCAAAATTTCAGAACA 59.702 36.000 0.00 0.00 0.00 3.18
7483 18246 6.016276 ACGAAGCTACCAAAATTTCAGAACAT 60.016 34.615 0.00 0.00 0.00 2.71
7484 18247 6.306356 CGAAGCTACCAAAATTTCAGAACATG 59.694 38.462 0.00 0.00 0.00 3.21
7486 18249 6.681777 AGCTACCAAAATTTCAGAACATGAC 58.318 36.000 0.00 0.00 37.77 3.06
7488 18251 7.039504 AGCTACCAAAATTTCAGAACATGACAT 60.040 33.333 0.00 0.00 37.77 3.06
7489 18252 7.274250 GCTACCAAAATTTCAGAACATGACATC 59.726 37.037 0.00 0.00 37.77 3.06
7490 18253 6.458210 ACCAAAATTTCAGAACATGACATCC 58.542 36.000 0.00 0.00 37.77 3.51
7491 18254 6.041865 ACCAAAATTTCAGAACATGACATCCA 59.958 34.615 0.00 0.00 37.77 3.41
7493 18256 8.252417 CCAAAATTTCAGAACATGACATCCATA 58.748 33.333 0.00 0.00 37.77 2.74
7498 18261 9.811995 ATTTCAGAACATGACATCCATAAAATG 57.188 29.630 0.00 0.00 37.77 2.32
7501 18264 8.843262 TCAGAACATGACATCCATAAAATGATC 58.157 33.333 0.00 0.00 33.31 2.92
7502 18265 8.626526 CAGAACATGACATCCATAAAATGATCA 58.373 33.333 0.00 0.00 33.31 2.92
7503 18266 8.627403 AGAACATGACATCCATAAAATGATCAC 58.373 33.333 0.00 0.00 33.31 3.06
7504 18267 7.885009 ACATGACATCCATAAAATGATCACA 57.115 32.000 0.00 0.00 33.31 3.58
7505 18268 8.296211 ACATGACATCCATAAAATGATCACAA 57.704 30.769 0.00 0.00 33.31 3.33
7506 18269 8.410912 ACATGACATCCATAAAATGATCACAAG 58.589 33.333 0.00 0.00 33.31 3.16
7507 18270 7.337480 TGACATCCATAAAATGATCACAAGG 57.663 36.000 0.00 0.00 0.00 3.61
7523 18286 7.497579 TGATCACAAGGTATGCACGTTAATTAT 59.502 33.333 0.00 0.00 31.72 1.28
7547 18310 0.397564 ATGCCCTTTGCTTTGGGTTG 59.602 50.000 9.54 0.00 45.06 3.77
7559 18322 2.432628 GGGTTGACGAGACTGCGG 60.433 66.667 0.00 0.00 35.12 5.69
7567 18330 2.433318 GAGACTGCGGCACTGTCC 60.433 66.667 16.07 6.84 45.67 4.02
7592 18355 5.784023 TGTCTAGGACTAACATTATCCCCA 58.216 41.667 0.00 0.00 33.15 4.96
7601 18364 6.424032 ACTAACATTATCCCCACTCTTTTCC 58.576 40.000 0.00 0.00 0.00 3.13
7603 18366 5.117406 ACATTATCCCCACTCTTTTCCTC 57.883 43.478 0.00 0.00 0.00 3.71
7604 18367 4.540099 ACATTATCCCCACTCTTTTCCTCA 59.460 41.667 0.00 0.00 0.00 3.86
7607 18370 4.682021 ATCCCCACTCTTTTCCTCATTT 57.318 40.909 0.00 0.00 0.00 2.32
7608 18371 4.034285 TCCCCACTCTTTTCCTCATTTC 57.966 45.455 0.00 0.00 0.00 2.17
7609 18372 2.749621 CCCCACTCTTTTCCTCATTTCG 59.250 50.000 0.00 0.00 0.00 3.46
7611 18374 3.821033 CCCACTCTTTTCCTCATTTCGTT 59.179 43.478 0.00 0.00 0.00 3.85
7612 18375 4.320494 CCCACTCTTTTCCTCATTTCGTTG 60.320 45.833 0.00 0.00 0.00 4.10
7613 18376 4.320494 CCACTCTTTTCCTCATTTCGTTGG 60.320 45.833 0.00 0.00 0.00 3.77
7655 18418 2.276116 ATGTGGAGCCGTGTCTCGT 61.276 57.895 0.00 0.00 37.94 4.18
7656 18419 1.816863 ATGTGGAGCCGTGTCTCGTT 61.817 55.000 0.00 0.00 37.94 3.85
7657 18420 1.300697 GTGGAGCCGTGTCTCGTTT 60.301 57.895 0.00 0.00 37.94 3.60
7658 18421 0.878961 GTGGAGCCGTGTCTCGTTTT 60.879 55.000 0.00 0.00 37.94 2.43
7659 18422 0.599204 TGGAGCCGTGTCTCGTTTTC 60.599 55.000 0.00 0.00 37.94 2.29
7660 18423 0.319641 GGAGCCGTGTCTCGTTTTCT 60.320 55.000 0.00 0.00 37.94 2.52
7661 18424 0.784778 GAGCCGTGTCTCGTTTTCTG 59.215 55.000 0.00 0.00 37.94 3.02
7662 18425 0.600255 AGCCGTGTCTCGTTTTCTGG 60.600 55.000 0.00 0.00 37.94 3.86
7663 18426 1.566018 GCCGTGTCTCGTTTTCTGGG 61.566 60.000 0.00 0.00 37.94 4.45
7664 18427 0.032952 CCGTGTCTCGTTTTCTGGGA 59.967 55.000 0.00 0.00 37.94 4.37
7665 18428 1.337823 CCGTGTCTCGTTTTCTGGGAT 60.338 52.381 0.00 0.00 37.94 3.85
7666 18429 1.993370 CGTGTCTCGTTTTCTGGGATC 59.007 52.381 0.00 0.00 34.52 3.36
7667 18430 2.352814 CGTGTCTCGTTTTCTGGGATCT 60.353 50.000 0.00 0.00 34.52 2.75
7668 18431 2.996621 GTGTCTCGTTTTCTGGGATCTG 59.003 50.000 0.00 0.00 0.00 2.90
7669 18432 2.897326 TGTCTCGTTTTCTGGGATCTGA 59.103 45.455 0.00 0.00 0.00 3.27
7670 18433 3.515502 TGTCTCGTTTTCTGGGATCTGAT 59.484 43.478 0.00 0.00 0.00 2.90
7671 18434 3.868077 GTCTCGTTTTCTGGGATCTGATG 59.132 47.826 0.00 0.00 0.00 3.07
7672 18435 3.769300 TCTCGTTTTCTGGGATCTGATGA 59.231 43.478 0.00 0.00 0.00 2.92
7673 18436 4.222810 TCTCGTTTTCTGGGATCTGATGAA 59.777 41.667 0.00 0.00 0.00 2.57
7674 18437 5.102953 TCGTTTTCTGGGATCTGATGAAT 57.897 39.130 0.00 0.00 0.00 2.57
7675 18438 5.118990 TCGTTTTCTGGGATCTGATGAATC 58.881 41.667 0.00 0.00 0.00 2.52
7676 18439 4.274459 CGTTTTCTGGGATCTGATGAATCC 59.726 45.833 0.00 0.00 0.00 3.01
7677 18440 5.195940 GTTTTCTGGGATCTGATGAATCCA 58.804 41.667 0.00 0.00 36.22 3.41
7678 18441 5.658198 TTTCTGGGATCTGATGAATCCAT 57.342 39.130 0.00 0.00 36.22 3.41
7691 18454 3.685139 GAATCCATCTAGATTCGGCCA 57.315 47.619 1.33 0.00 41.90 5.36
7692 18455 3.594134 GAATCCATCTAGATTCGGCCAG 58.406 50.000 1.33 0.00 41.90 4.85
7693 18456 0.681733 TCCATCTAGATTCGGCCAGC 59.318 55.000 1.33 0.00 0.00 4.85
7694 18457 0.683973 CCATCTAGATTCGGCCAGCT 59.316 55.000 1.33 0.00 0.00 4.24
7695 18458 1.071385 CCATCTAGATTCGGCCAGCTT 59.929 52.381 1.33 0.00 0.00 3.74
7696 18459 2.486191 CCATCTAGATTCGGCCAGCTTT 60.486 50.000 1.33 0.00 0.00 3.51
7697 18460 2.604046 TCTAGATTCGGCCAGCTTTC 57.396 50.000 2.24 0.00 0.00 2.62
7698 18461 1.831106 TCTAGATTCGGCCAGCTTTCA 59.169 47.619 2.24 0.00 0.00 2.69
7699 18462 2.435805 TCTAGATTCGGCCAGCTTTCAT 59.564 45.455 2.24 0.00 0.00 2.57
7700 18463 1.386533 AGATTCGGCCAGCTTTCATG 58.613 50.000 2.24 0.00 0.00 3.07
7701 18464 0.383231 GATTCGGCCAGCTTTCATGG 59.617 55.000 2.24 0.00 41.04 3.66
7702 18465 0.323725 ATTCGGCCAGCTTTCATGGT 60.324 50.000 2.24 0.00 40.17 3.55
7703 18466 0.960364 TTCGGCCAGCTTTCATGGTC 60.960 55.000 2.24 0.00 40.17 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.986019 TCCCACAAGATTTTGGAGAGGA 59.014 45.455 0.57 0.00 38.66 3.71
2 3 3.439857 TCCCACAAGATTTTGGAGAGG 57.560 47.619 0.57 0.00 38.66 3.69
3 4 5.477984 TGAAATCCCACAAGATTTTGGAGAG 59.522 40.000 0.57 0.00 44.52 3.20
6 7 5.569227 GCATGAAATCCCACAAGATTTTGGA 60.569 40.000 0.00 0.00 44.52 3.53
7 8 4.632688 GCATGAAATCCCACAAGATTTTGG 59.367 41.667 0.00 0.00 44.52 3.28
8 9 4.632688 GGCATGAAATCCCACAAGATTTTG 59.367 41.667 0.00 0.00 44.52 2.44
9 10 4.621274 CGGCATGAAATCCCACAAGATTTT 60.621 41.667 0.00 0.00 44.52 1.82
10 11 3.119029 CGGCATGAAATCCCACAAGATTT 60.119 43.478 0.00 0.00 46.58 2.17
11 12 2.428171 CGGCATGAAATCCCACAAGATT 59.572 45.455 0.00 0.00 38.11 2.40
12 13 2.026641 CGGCATGAAATCCCACAAGAT 58.973 47.619 0.00 0.00 0.00 2.40
13 14 1.271871 ACGGCATGAAATCCCACAAGA 60.272 47.619 0.00 0.00 0.00 3.02
14 15 1.135315 CACGGCATGAAATCCCACAAG 60.135 52.381 0.00 0.00 0.00 3.16
15 16 0.887247 CACGGCATGAAATCCCACAA 59.113 50.000 0.00 0.00 0.00 3.33
16 17 1.594194 GCACGGCATGAAATCCCACA 61.594 55.000 0.00 0.00 0.00 4.17
17 18 1.139520 GCACGGCATGAAATCCCAC 59.860 57.895 0.00 0.00 0.00 4.61
18 19 2.051518 GGCACGGCATGAAATCCCA 61.052 57.895 0.00 0.00 0.00 4.37
19 20 1.322538 AAGGCACGGCATGAAATCCC 61.323 55.000 0.00 0.00 0.00 3.85
20 21 0.179129 CAAGGCACGGCATGAAATCC 60.179 55.000 0.00 0.00 0.00 3.01
21 22 0.810648 TCAAGGCACGGCATGAAATC 59.189 50.000 0.00 0.00 0.00 2.17
22 23 1.406539 GATCAAGGCACGGCATGAAAT 59.593 47.619 0.00 0.00 31.76 2.17
23 24 0.810648 GATCAAGGCACGGCATGAAA 59.189 50.000 0.00 0.00 31.76 2.69
24 25 1.031571 GGATCAAGGCACGGCATGAA 61.032 55.000 0.00 0.00 31.76 2.57
25 26 1.451927 GGATCAAGGCACGGCATGA 60.452 57.895 0.00 0.85 32.33 3.07
26 27 1.033746 AAGGATCAAGGCACGGCATG 61.034 55.000 0.00 0.00 0.00 4.06
27 28 1.033746 CAAGGATCAAGGCACGGCAT 61.034 55.000 0.00 0.00 0.00 4.40
28 29 1.675310 CAAGGATCAAGGCACGGCA 60.675 57.895 0.00 0.00 0.00 5.69
29 30 0.960364 TTCAAGGATCAAGGCACGGC 60.960 55.000 0.00 0.00 0.00 5.68
30 31 1.089920 CTTCAAGGATCAAGGCACGG 58.910 55.000 0.00 0.00 0.00 4.94
31 32 2.099141 TCTTCAAGGATCAAGGCACG 57.901 50.000 0.00 0.00 0.00 5.34
32 33 4.853924 TTTTCTTCAAGGATCAAGGCAC 57.146 40.909 0.00 0.00 0.00 5.01
33 34 4.039124 GGTTTTTCTTCAAGGATCAAGGCA 59.961 41.667 0.00 0.00 0.00 4.75
34 35 4.281941 AGGTTTTTCTTCAAGGATCAAGGC 59.718 41.667 0.00 0.00 0.00 4.35
35 36 6.349694 GCTAGGTTTTTCTTCAAGGATCAAGG 60.350 42.308 0.00 0.00 0.00 3.61
36 37 6.207417 TGCTAGGTTTTTCTTCAAGGATCAAG 59.793 38.462 0.00 0.00 0.00 3.02
37 38 6.068010 TGCTAGGTTTTTCTTCAAGGATCAA 58.932 36.000 0.00 0.00 0.00 2.57
38 39 5.630121 TGCTAGGTTTTTCTTCAAGGATCA 58.370 37.500 0.00 0.00 0.00 2.92
39 40 6.405176 CCATGCTAGGTTTTTCTTCAAGGATC 60.405 42.308 0.00 0.00 0.00 3.36
40 41 5.420104 CCATGCTAGGTTTTTCTTCAAGGAT 59.580 40.000 0.00 0.00 0.00 3.24
41 42 4.766891 CCATGCTAGGTTTTTCTTCAAGGA 59.233 41.667 0.00 0.00 0.00 3.36
42 43 4.082026 CCCATGCTAGGTTTTTCTTCAAGG 60.082 45.833 0.00 0.00 0.00 3.61
43 44 4.619160 GCCCATGCTAGGTTTTTCTTCAAG 60.619 45.833 0.00 0.00 33.53 3.02
44 45 3.258123 GCCCATGCTAGGTTTTTCTTCAA 59.742 43.478 0.00 0.00 33.53 2.69
45 46 2.825532 GCCCATGCTAGGTTTTTCTTCA 59.174 45.455 0.00 0.00 33.53 3.02
46 47 2.825532 TGCCCATGCTAGGTTTTTCTTC 59.174 45.455 0.00 0.00 38.71 2.87
47 48 2.827921 CTGCCCATGCTAGGTTTTTCTT 59.172 45.455 0.00 0.00 38.71 2.52
48 49 2.225117 ACTGCCCATGCTAGGTTTTTCT 60.225 45.455 0.00 0.00 38.71 2.52
49 50 2.094545 CACTGCCCATGCTAGGTTTTTC 60.095 50.000 0.00 0.00 38.71 2.29
50 51 1.895131 CACTGCCCATGCTAGGTTTTT 59.105 47.619 0.00 0.00 38.71 1.94
51 52 1.549203 CACTGCCCATGCTAGGTTTT 58.451 50.000 0.00 0.00 38.71 2.43
52 53 0.967380 GCACTGCCCATGCTAGGTTT 60.967 55.000 0.00 0.00 40.08 3.27
53 54 1.379044 GCACTGCCCATGCTAGGTT 60.379 57.895 0.00 0.00 40.08 3.50
54 55 2.141011 TTGCACTGCCCATGCTAGGT 62.141 55.000 0.00 0.00 43.77 3.08
55 56 0.754217 ATTGCACTGCCCATGCTAGG 60.754 55.000 0.00 0.00 43.77 3.02
56 57 0.384309 CATTGCACTGCCCATGCTAG 59.616 55.000 0.00 0.00 43.77 3.42
57 58 1.038681 CCATTGCACTGCCCATGCTA 61.039 55.000 0.00 0.00 43.77 3.49
58 59 2.355986 CCATTGCACTGCCCATGCT 61.356 57.895 0.00 0.00 43.77 3.79
59 60 1.890625 TTCCATTGCACTGCCCATGC 61.891 55.000 0.00 0.00 43.68 4.06
60 61 0.108520 GTTCCATTGCACTGCCCATG 60.109 55.000 0.00 1.20 0.00 3.66
61 62 1.259840 GGTTCCATTGCACTGCCCAT 61.260 55.000 0.00 0.00 0.00 4.00
62 63 1.907807 GGTTCCATTGCACTGCCCA 60.908 57.895 0.00 0.00 0.00 5.36
63 64 2.649129 GGGTTCCATTGCACTGCCC 61.649 63.158 0.00 0.56 0.00 5.36
64 65 2.649129 GGGGTTCCATTGCACTGCC 61.649 63.158 0.00 0.00 0.00 4.85
65 66 1.470996 TTGGGGTTCCATTGCACTGC 61.471 55.000 0.00 0.00 43.63 4.40
66 67 1.047002 TTTGGGGTTCCATTGCACTG 58.953 50.000 0.00 0.00 43.63 3.66
67 68 1.799933 TTTTGGGGTTCCATTGCACT 58.200 45.000 0.00 0.00 43.63 4.40
68 69 2.629336 TTTTTGGGGTTCCATTGCAC 57.371 45.000 0.00 0.00 43.63 4.57
84 85 3.724508 TGATCAATGTGGCGTGTTTTT 57.275 38.095 0.00 0.00 0.00 1.94
85 86 3.724508 TTGATCAATGTGGCGTGTTTT 57.275 38.095 3.38 0.00 0.00 2.43
86 87 3.940209 ATTGATCAATGTGGCGTGTTT 57.060 38.095 20.11 0.00 0.00 2.83
87 88 3.940209 AATTGATCAATGTGGCGTGTT 57.060 38.095 21.39 0.54 0.00 3.32
88 89 3.255395 TCAAATTGATCAATGTGGCGTGT 59.745 39.130 29.94 8.62 36.81 4.49
89 90 3.609373 GTCAAATTGATCAATGTGGCGTG 59.391 43.478 29.94 17.33 36.81 5.34
90 91 3.255395 TGTCAAATTGATCAATGTGGCGT 59.745 39.130 29.26 9.87 42.15 5.68
91 92 3.835779 TGTCAAATTGATCAATGTGGCG 58.164 40.909 29.26 11.97 42.15 5.69
92 93 4.033587 GCATGTCAAATTGATCAATGTGGC 59.966 41.667 28.91 28.91 40.23 5.01
93 94 5.062934 GTGCATGTCAAATTGATCAATGTGG 59.937 40.000 29.94 18.75 36.81 4.17
94 95 5.635700 TGTGCATGTCAAATTGATCAATGTG 59.364 36.000 26.60 26.60 37.37 3.21
95 96 5.785243 TGTGCATGTCAAATTGATCAATGT 58.215 33.333 21.39 13.66 0.00 2.71
96 97 6.588373 TCTTGTGCATGTCAAATTGATCAATG 59.412 34.615 21.39 11.86 0.00 2.82
97 98 6.693466 TCTTGTGCATGTCAAATTGATCAAT 58.307 32.000 15.36 15.36 0.00 2.57
98 99 6.086785 TCTTGTGCATGTCAAATTGATCAA 57.913 33.333 11.26 11.26 0.00 2.57
99 100 5.708877 TCTTGTGCATGTCAAATTGATCA 57.291 34.783 0.00 0.00 0.00 2.92
100 101 6.569228 CATCTTGTGCATGTCAAATTGATC 57.431 37.500 0.00 0.00 0.00 2.92
115 116 9.264719 TCATAGTTAGATACAATGCATCTTGTG 57.735 33.333 14.53 5.35 39.60 3.33
116 117 9.836864 TTCATAGTTAGATACAATGCATCTTGT 57.163 29.630 10.37 10.37 41.95 3.16
127 128 9.533831 TGGCATCTAGATTCATAGTTAGATACA 57.466 33.333 1.33 0.00 32.96 2.29
129 130 9.981460 TCTGGCATCTAGATTCATAGTTAGATA 57.019 33.333 1.33 0.00 32.96 1.98
130 131 8.891985 TCTGGCATCTAGATTCATAGTTAGAT 57.108 34.615 1.33 0.00 34.15 1.98
131 132 8.891985 ATCTGGCATCTAGATTCATAGTTAGA 57.108 34.615 1.33 1.12 30.98 2.10
141 142 5.643421 AACTGGAATCTGGCATCTAGATT 57.357 39.130 1.33 5.32 45.05 2.40
142 143 5.455899 GGAAACTGGAATCTGGCATCTAGAT 60.456 44.000 6.92 0.00 36.49 1.98
143 144 4.141620 GGAAACTGGAATCTGGCATCTAGA 60.142 45.833 6.92 0.00 0.00 2.43
144 145 4.133078 GGAAACTGGAATCTGGCATCTAG 58.867 47.826 0.00 0.00 0.00 2.43
145 146 3.117888 GGGAAACTGGAATCTGGCATCTA 60.118 47.826 0.00 0.00 0.00 1.98
146 147 2.357569 GGGAAACTGGAATCTGGCATCT 60.358 50.000 0.00 0.00 0.00 2.90
147 148 2.027385 GGGAAACTGGAATCTGGCATC 58.973 52.381 0.00 0.00 0.00 3.91
148 149 1.342374 GGGGAAACTGGAATCTGGCAT 60.342 52.381 0.00 0.00 0.00 4.40
149 150 0.039618 GGGGAAACTGGAATCTGGCA 59.960 55.000 0.00 0.00 0.00 4.92
150 151 0.684479 GGGGGAAACTGGAATCTGGC 60.684 60.000 0.00 0.00 0.00 4.85
151 152 0.704076 TGGGGGAAACTGGAATCTGG 59.296 55.000 0.00 0.00 0.00 3.86
152 153 1.355720 AGTGGGGGAAACTGGAATCTG 59.644 52.381 0.00 0.00 0.00 2.90
153 154 1.760405 AGTGGGGGAAACTGGAATCT 58.240 50.000 0.00 0.00 0.00 2.40
154 155 2.447443 GAAGTGGGGGAAACTGGAATC 58.553 52.381 0.00 0.00 0.00 2.52
155 156 1.077169 GGAAGTGGGGGAAACTGGAAT 59.923 52.381 0.00 0.00 0.00 3.01
156 157 0.481128 GGAAGTGGGGGAAACTGGAA 59.519 55.000 0.00 0.00 0.00 3.53
157 158 1.432023 GGGAAGTGGGGGAAACTGGA 61.432 60.000 0.00 0.00 0.00 3.86
158 159 1.076727 GGGAAGTGGGGGAAACTGG 59.923 63.158 0.00 0.00 0.00 4.00
159 160 1.303317 CGGGAAGTGGGGGAAACTG 60.303 63.158 0.00 0.00 0.00 3.16
160 161 0.474273 TACGGGAAGTGGGGGAAACT 60.474 55.000 0.00 0.00 0.00 2.66
161 162 0.035725 CTACGGGAAGTGGGGGAAAC 60.036 60.000 0.00 0.00 0.00 2.78
162 163 1.844544 GCTACGGGAAGTGGGGGAAA 61.845 60.000 0.00 0.00 0.00 3.13
163 164 2.295602 GCTACGGGAAGTGGGGGAA 61.296 63.158 0.00 0.00 0.00 3.97
164 165 2.686106 GCTACGGGAAGTGGGGGA 60.686 66.667 0.00 0.00 0.00 4.81
165 166 2.375345 ATGCTACGGGAAGTGGGGG 61.375 63.158 0.00 0.00 0.00 5.40
166 167 1.153168 CATGCTACGGGAAGTGGGG 60.153 63.158 0.00 0.00 0.00 4.96
167 168 0.251916 TTCATGCTACGGGAAGTGGG 59.748 55.000 0.00 0.00 0.00 4.61
168 169 2.158900 AGATTCATGCTACGGGAAGTGG 60.159 50.000 0.00 0.00 0.00 4.00
169 170 3.185246 AGATTCATGCTACGGGAAGTG 57.815 47.619 0.00 0.00 0.00 3.16
170 171 4.215908 TCTAGATTCATGCTACGGGAAGT 58.784 43.478 0.00 0.00 0.00 3.01
171 172 4.855715 TCTAGATTCATGCTACGGGAAG 57.144 45.455 0.00 0.00 0.00 3.46
172 173 4.561530 GCATCTAGATTCATGCTACGGGAA 60.562 45.833 1.33 0.00 41.93 3.97
173 174 3.056536 GCATCTAGATTCATGCTACGGGA 60.057 47.826 1.33 0.00 41.93 5.14
174 175 3.257393 GCATCTAGATTCATGCTACGGG 58.743 50.000 1.33 0.00 41.93 5.28
175 176 3.257393 GGCATCTAGATTCATGCTACGG 58.743 50.000 14.10 0.00 44.20 4.02
176 177 3.917988 TGGCATCTAGATTCATGCTACG 58.082 45.455 14.10 0.00 44.20 3.51
177 178 5.144692 TCTGGCATCTAGATTCATGCTAC 57.855 43.478 14.10 1.85 44.20 3.58
178 179 6.370186 AATCTGGCATCTAGATTCATGCTA 57.630 37.500 14.10 8.55 44.20 3.49
179 180 4.912317 ATCTGGCATCTAGATTCATGCT 57.088 40.909 14.10 0.00 44.20 3.79
180 181 5.472478 TGAAATCTGGCATCTAGATTCATGC 59.528 40.000 1.33 4.92 42.43 4.06
181 182 6.711194 ACTGAAATCTGGCATCTAGATTCATG 59.289 38.462 1.33 0.00 42.43 3.07
182 183 6.839454 ACTGAAATCTGGCATCTAGATTCAT 58.161 36.000 1.33 0.00 42.43 2.57
183 184 6.244552 ACTGAAATCTGGCATCTAGATTCA 57.755 37.500 1.33 4.06 42.43 2.57
184 185 7.255070 GGAAACTGAAATCTGGCATCTAGATTC 60.255 40.741 1.33 0.00 42.43 2.52
185 186 6.545298 GGAAACTGAAATCTGGCATCTAGATT 59.455 38.462 1.33 0.43 44.47 2.40
186 187 6.060788 GGAAACTGAAATCTGGCATCTAGAT 58.939 40.000 0.00 0.00 36.49 1.98
187 188 5.431765 GGAAACTGAAATCTGGCATCTAGA 58.568 41.667 0.00 0.00 0.00 2.43
188 189 4.578105 GGGAAACTGAAATCTGGCATCTAG 59.422 45.833 0.00 0.00 0.00 2.43
189 190 4.526970 GGGAAACTGAAATCTGGCATCTA 58.473 43.478 0.00 0.00 0.00 1.98
190 191 3.359950 GGGAAACTGAAATCTGGCATCT 58.640 45.455 0.00 0.00 0.00 2.90
191 192 2.428530 GGGGAAACTGAAATCTGGCATC 59.571 50.000 0.00 0.00 0.00 3.91
192 193 2.460669 GGGGAAACTGAAATCTGGCAT 58.539 47.619 0.00 0.00 0.00 4.40
193 194 1.549950 GGGGGAAACTGAAATCTGGCA 60.550 52.381 0.00 0.00 0.00 4.92
194 195 1.186200 GGGGGAAACTGAAATCTGGC 58.814 55.000 0.00 0.00 0.00 4.85
195 196 2.171003 GTGGGGGAAACTGAAATCTGG 58.829 52.381 0.00 0.00 0.00 3.86
221 222 1.450531 GCACCATGGGCATCTGCTAC 61.451 60.000 18.09 0.00 41.70 3.58
239 240 3.569701 TCTTGGAGACTTTTCACAATGGC 59.430 43.478 0.00 0.00 0.00 4.40
252 253 0.966920 TTCCCACGAGTCTTGGAGAC 59.033 55.000 17.00 0.00 45.38 3.36
275 276 2.216046 CACATTGCACATCTCCGCTAT 58.784 47.619 0.00 0.00 0.00 2.97
276 277 1.655484 CACATTGCACATCTCCGCTA 58.345 50.000 0.00 0.00 0.00 4.26
277 278 1.651240 GCACATTGCACATCTCCGCT 61.651 55.000 0.00 0.00 44.26 5.52
291 306 2.261671 GACGAGGTCACGGCACAT 59.738 61.111 0.00 0.00 41.34 3.21
336 351 1.433121 GATGAGAAGGGGAGATGCCT 58.567 55.000 0.00 0.00 36.66 4.75
380 395 1.410004 TACATCGGGGATGGAGTCAC 58.590 55.000 10.10 0.00 43.60 3.67
381 396 2.248248 GATACATCGGGGATGGAGTCA 58.752 52.381 10.10 0.00 43.60 3.41
446 471 1.407656 ATATGTGGCCGACGGGTGAT 61.408 55.000 17.22 0.00 34.97 3.06
447 472 2.023414 GATATGTGGCCGACGGGTGA 62.023 60.000 17.22 0.00 34.97 4.02
460 485 3.133003 CCCTTGAGAGTTCCACGATATGT 59.867 47.826 0.00 0.00 0.00 2.29
511 536 1.382695 TCGTCCATTCCCCTCCTCC 60.383 63.158 0.00 0.00 0.00 4.30
554 579 4.574599 AGAGAGCGCTTGTTTCATTTTT 57.425 36.364 13.26 0.00 0.00 1.94
559 584 3.005897 AGACTAAGAGAGCGCTTGTTTCA 59.994 43.478 13.26 0.00 0.00 2.69
561 586 3.257127 AGAGACTAAGAGAGCGCTTGTTT 59.743 43.478 13.26 8.92 0.00 2.83
564 589 3.502191 AAGAGACTAAGAGAGCGCTTG 57.498 47.619 13.26 0.50 0.00 4.01
565 590 3.761752 AGAAAGAGACTAAGAGAGCGCTT 59.238 43.478 13.26 0.58 0.00 4.68
566 591 3.352648 AGAAAGAGACTAAGAGAGCGCT 58.647 45.455 11.27 11.27 0.00 5.92
567 592 3.775661 AGAAAGAGACTAAGAGAGCGC 57.224 47.619 0.00 0.00 0.00 5.92
568 593 3.857093 GCAAGAAAGAGACTAAGAGAGCG 59.143 47.826 0.00 0.00 0.00 5.03
570 595 7.387397 ACAAATGCAAGAAAGAGACTAAGAGAG 59.613 37.037 0.00 0.00 0.00 3.20
571 596 7.220030 ACAAATGCAAGAAAGAGACTAAGAGA 58.780 34.615 0.00 0.00 0.00 3.10
572 597 7.432350 ACAAATGCAAGAAAGAGACTAAGAG 57.568 36.000 0.00 0.00 0.00 2.85
573 598 7.283127 ACAACAAATGCAAGAAAGAGACTAAGA 59.717 33.333 0.00 0.00 0.00 2.10
574 599 7.420800 ACAACAAATGCAAGAAAGAGACTAAG 58.579 34.615 0.00 0.00 0.00 2.18
575 600 7.333528 ACAACAAATGCAAGAAAGAGACTAA 57.666 32.000 0.00 0.00 0.00 2.24
578 630 5.232838 CCAACAACAAATGCAAGAAAGAGAC 59.767 40.000 0.00 0.00 0.00 3.36
625 677 9.408648 CCAAACTCCCATATACACTTTTCTTAT 57.591 33.333 0.00 0.00 0.00 1.73
626 678 8.387813 ACCAAACTCCCATATACACTTTTCTTA 58.612 33.333 0.00 0.00 0.00 2.10
629 724 6.127730 CCACCAAACTCCCATATACACTTTTC 60.128 42.308 0.00 0.00 0.00 2.29
634 729 3.551846 CCCACCAAACTCCCATATACAC 58.448 50.000 0.00 0.00 0.00 2.90
1164 9056 1.228003 ACACAAATCCACCGCCGAA 60.228 52.632 0.00 0.00 0.00 4.30
1166 9058 2.560861 CACACAAATCCACCGCCG 59.439 61.111 0.00 0.00 0.00 6.46
1187 9079 3.259374 CCCACATCTCGCCTACTATTCAT 59.741 47.826 0.00 0.00 0.00 2.57
1188 9080 2.628178 CCCACATCTCGCCTACTATTCA 59.372 50.000 0.00 0.00 0.00 2.57
1276 9168 9.447157 AAATGACTTTTTCATCACCAAAAAGAA 57.553 25.926 19.48 10.54 46.87 2.52
1371 9301 2.083167 TCGGTAAAAGGCTAACCACG 57.917 50.000 12.45 4.85 39.06 4.94
1400 10616 2.381911 AGAAGGCCATCGCATCAAAAT 58.618 42.857 5.01 0.00 36.38 1.82
1404 10620 2.936919 AATAGAAGGCCATCGCATCA 57.063 45.000 5.01 0.00 36.38 3.07
1405 10621 2.158449 CGAAATAGAAGGCCATCGCATC 59.842 50.000 5.01 0.75 36.38 3.91
1406 10622 2.146342 CGAAATAGAAGGCCATCGCAT 58.854 47.619 5.01 0.00 36.38 4.73
1419 10650 0.529992 GACACGCTCCCCCGAAATAG 60.530 60.000 0.00 0.00 0.00 1.73
1469 10722 4.948004 CACAGTACACATACTCTACTCCCA 59.052 45.833 0.00 0.00 39.80 4.37
1474 10727 6.496571 CCTAAGCACAGTACACATACTCTAC 58.503 44.000 0.00 0.00 39.80 2.59
1485 10741 0.389948 AGCACGCCTAAGCACAGTAC 60.390 55.000 0.00 0.00 39.83 2.73
1486 10742 0.320374 AAGCACGCCTAAGCACAGTA 59.680 50.000 0.00 0.00 39.83 2.74
1489 10745 1.565156 CGAAAGCACGCCTAAGCACA 61.565 55.000 0.00 0.00 39.83 4.57
1492 10748 0.452784 CAACGAAAGCACGCCTAAGC 60.453 55.000 0.00 0.00 36.70 3.09
1493 10749 1.126846 CTCAACGAAAGCACGCCTAAG 59.873 52.381 0.00 0.00 36.70 2.18
1494 10750 1.144969 CTCAACGAAAGCACGCCTAA 58.855 50.000 0.00 0.00 36.70 2.69
1504 10760 2.890311 ACATTTCCATGCCTCAACGAAA 59.110 40.909 0.00 0.00 33.05 3.46
1546 10806 2.298411 AGCAACAAAAACTGCCACTG 57.702 45.000 0.00 0.00 39.47 3.66
1568 10828 0.311790 ACACAAGCAAAGCACATCGG 59.688 50.000 0.00 0.00 0.00 4.18
1842 11106 3.451402 AAAAGGGTACAAGGGGACATC 57.549 47.619 0.00 0.00 0.00 3.06
1994 11260 6.045955 GGTTTTGCTAACACTTGGAAAATCA 58.954 36.000 0.00 0.00 35.60 2.57
1995 11261 6.280643 AGGTTTTGCTAACACTTGGAAAATC 58.719 36.000 4.98 0.00 36.29 2.17
2022 11288 2.481952 GCAAGTCCTAAGACACAGCAAG 59.518 50.000 0.00 0.00 46.15 4.01
2051 11317 4.327627 GCAGTTCGTAAAGATGGAGAAGTC 59.672 45.833 0.00 0.00 0.00 3.01
2107 11379 8.150945 TGAACAACAACTCTCTCTAAGCTAAAT 58.849 33.333 0.00 0.00 0.00 1.40
2171 11646 6.759827 GGTTTTCAGTCACTACAGTACAGAAA 59.240 38.462 0.00 0.00 0.00 2.52
2842 12383 9.832445 GGAGGATGATAACATTTAGAAGTGTTA 57.168 33.333 11.35 11.35 42.85 2.41
2916 12627 6.332635 TCCCCATATTCCTCATACTGTGAAAT 59.667 38.462 0.00 0.00 36.14 2.17
2990 12701 4.032445 GCGATGAAGCTTTTATCACGTGTA 59.968 41.667 16.51 4.61 0.00 2.90
3175 12888 3.980775 CAGTTGAATAACCAAGCAAACCG 59.019 43.478 0.00 0.00 37.52 4.44
3617 13510 9.129532 AGATCTGACCCAAAATTTAATCTCATC 57.870 33.333 0.00 0.00 0.00 2.92
3753 13660 7.661437 AGCTTCGCAAATATTATGTCTATCCAA 59.339 33.333 0.00 0.00 0.00 3.53
3774 13681 5.108254 CGTTGCAAATTTAACAGTCAGCTTC 60.108 40.000 0.00 0.00 0.00 3.86
4134 14059 7.601073 CAACTCTGCATTTCTAGTACAATGA 57.399 36.000 13.09 0.00 32.91 2.57
4205 14212 8.494433 AGATTAGTAGGCAAGACAAATGGATAA 58.506 33.333 0.00 0.00 0.00 1.75
4245 14252 1.341531 CTCCTTAGGCCACCTACGATG 59.658 57.143 5.01 0.00 35.63 3.84
4363 14371 4.328983 AGGTACGAAATGTAACAGATTGCG 59.671 41.667 0.00 0.00 43.60 4.85
4366 14374 8.385898 TCAAAAGGTACGAAATGTAACAGATT 57.614 30.769 0.00 0.00 43.60 2.40
4367 14375 7.972832 TCAAAAGGTACGAAATGTAACAGAT 57.027 32.000 0.00 0.00 43.60 2.90
4555 14993 8.695284 CATCGCATTAAGAGTCTAAGACATAAC 58.305 37.037 0.00 0.00 34.60 1.89
4561 14999 8.417106 AGAAATCATCGCATTAAGAGTCTAAGA 58.583 33.333 0.00 0.00 0.00 2.10
4562 15000 8.486383 CAGAAATCATCGCATTAAGAGTCTAAG 58.514 37.037 0.00 0.00 0.00 2.18
4563 15001 7.981789 ACAGAAATCATCGCATTAAGAGTCTAA 59.018 33.333 0.00 0.00 0.00 2.10
4564 15002 7.492524 ACAGAAATCATCGCATTAAGAGTCTA 58.507 34.615 0.00 0.00 0.00 2.59
4565 15003 6.344500 ACAGAAATCATCGCATTAAGAGTCT 58.656 36.000 0.00 0.00 0.00 3.24
4566 15004 6.595772 ACAGAAATCATCGCATTAAGAGTC 57.404 37.500 0.00 0.00 0.00 3.36
4567 15005 8.668510 AATACAGAAATCATCGCATTAAGAGT 57.331 30.769 0.00 0.00 0.00 3.24
4574 15012 9.499479 AAGATCTTAATACAGAAATCATCGCAT 57.501 29.630 6.06 0.00 0.00 4.73
4604 15042 6.075762 TGATTCCGAATAAAATGCCATCTG 57.924 37.500 0.00 0.00 0.00 2.90
4728 15168 3.522553 GACAGTTAATTCCGGACAGAGG 58.477 50.000 1.83 0.00 0.00 3.69
4730 15170 2.673043 GCGACAGTTAATTCCGGACAGA 60.673 50.000 1.83 0.00 0.00 3.41
4731 15171 1.659098 GCGACAGTTAATTCCGGACAG 59.341 52.381 1.83 0.00 0.00 3.51
4733 15173 2.005971 AGCGACAGTTAATTCCGGAC 57.994 50.000 1.83 0.00 0.00 4.79
4737 15177 6.961554 CACTCATTTTAGCGACAGTTAATTCC 59.038 38.462 0.00 0.00 0.00 3.01
4738 15178 7.519002 ACACTCATTTTAGCGACAGTTAATTC 58.481 34.615 0.00 0.00 0.00 2.17
4740 15180 8.718102 ATACACTCATTTTAGCGACAGTTAAT 57.282 30.769 0.00 0.00 0.00 1.40
4742 15182 7.544622 AGATACACTCATTTTAGCGACAGTTA 58.455 34.615 0.00 0.00 0.00 2.24
4743 15183 6.398918 AGATACACTCATTTTAGCGACAGTT 58.601 36.000 0.00 0.00 0.00 3.16
4745 15185 6.140895 CGTAGATACACTCATTTTAGCGACAG 59.859 42.308 0.00 0.00 0.00 3.51
4746 15186 5.969435 CGTAGATACACTCATTTTAGCGACA 59.031 40.000 0.00 0.00 0.00 4.35
4747 15187 5.108330 GCGTAGATACACTCATTTTAGCGAC 60.108 44.000 0.00 0.00 0.00 5.19
4748 15188 4.974275 GCGTAGATACACTCATTTTAGCGA 59.026 41.667 0.00 0.00 0.00 4.93
4749 15189 4.738252 TGCGTAGATACACTCATTTTAGCG 59.262 41.667 0.00 0.00 0.00 4.26
4754 15194 5.324784 TCAGTGCGTAGATACACTCATTT 57.675 39.130 0.00 0.00 45.15 2.32
4755 15195 4.983671 TCAGTGCGTAGATACACTCATT 57.016 40.909 0.00 0.00 45.15 2.57
4758 15198 3.542704 CGTTTCAGTGCGTAGATACACTC 59.457 47.826 0.00 0.00 45.15 3.51
4761 15201 2.416296 CCCGTTTCAGTGCGTAGATACA 60.416 50.000 0.00 0.00 0.00 2.29
4762 15202 2.190981 CCCGTTTCAGTGCGTAGATAC 58.809 52.381 0.00 0.00 0.00 2.24
4763 15203 1.820519 ACCCGTTTCAGTGCGTAGATA 59.179 47.619 0.00 0.00 0.00 1.98
4764 15204 0.606604 ACCCGTTTCAGTGCGTAGAT 59.393 50.000 0.00 0.00 0.00 1.98
4765 15205 0.390124 AACCCGTTTCAGTGCGTAGA 59.610 50.000 0.00 0.00 0.00 2.59
4766 15206 0.511221 CAACCCGTTTCAGTGCGTAG 59.489 55.000 0.00 0.00 0.00 3.51
4767 15207 0.179078 ACAACCCGTTTCAGTGCGTA 60.179 50.000 0.00 0.00 0.00 4.42
4768 15208 0.179078 TACAACCCGTTTCAGTGCGT 60.179 50.000 0.00 0.00 0.00 5.24
4770 15210 1.589803 AGTACAACCCGTTTCAGTGC 58.410 50.000 0.00 0.00 0.00 4.40
4771 15211 7.548075 AGAAATATAGTACAACCCGTTTCAGTG 59.452 37.037 0.00 0.00 0.00 3.66
4772 15212 7.618137 AGAAATATAGTACAACCCGTTTCAGT 58.382 34.615 0.00 0.00 0.00 3.41
4773 15213 8.488651 AAGAAATATAGTACAACCCGTTTCAG 57.511 34.615 0.00 0.00 0.00 3.02
4774 15214 9.590451 CTAAGAAATATAGTACAACCCGTTTCA 57.410 33.333 0.00 0.00 0.00 2.69
4775 15215 9.807649 TCTAAGAAATATAGTACAACCCGTTTC 57.192 33.333 0.00 0.00 0.00 2.78
4779 15219 9.976511 TTCATCTAAGAAATATAGTACAACCCG 57.023 33.333 0.00 0.00 0.00 5.28
4988 15474 6.767524 ACACCAGTAAACAACATTGAGAAA 57.232 33.333 0.00 0.00 0.00 2.52
5094 15712 6.208988 TCCTCTGCTTATGTTACTACACTG 57.791 41.667 0.00 0.00 37.03 3.66
5165 15784 4.133078 CCTTAGCAGCTTTAAGATCAGGG 58.867 47.826 0.00 0.00 31.26 4.45
5311 15931 3.480470 CATCAATGCCCTCCTACGATTT 58.520 45.455 0.00 0.00 0.00 2.17
5358 15978 2.096980 GGTCGTGACATCATACGTCTCA 59.903 50.000 0.00 0.00 40.87 3.27
5560 16180 4.985538 AGCAGACATAAACCAAAAGGAGA 58.014 39.130 0.00 0.00 0.00 3.71
5576 16196 5.932303 TGACCATCTAAACAACTTAGCAGAC 59.068 40.000 0.00 0.00 37.51 3.51
5627 16252 6.374417 AGAGCTTTTATCTAAACACCAGGA 57.626 37.500 0.00 0.00 0.00 3.86
5717 16342 5.418310 TGATGAAGTTTTTGTCGAGGAAC 57.582 39.130 0.00 0.00 0.00 3.62
5799 16424 7.531857 TGGATAGAGCTAGAGTGAAATTAGG 57.468 40.000 0.00 0.00 0.00 2.69
5935 16567 3.134081 CCTTCGGTAAATAGGGCTTCTCA 59.866 47.826 0.00 0.00 0.00 3.27
5953 16585 4.293662 AGGATGAACTTCTCCAACCTTC 57.706 45.455 8.91 0.00 32.55 3.46
5981 16613 6.917477 TGCAAGTAACAGAGCAAATAAAACAG 59.083 34.615 0.00 0.00 33.48 3.16
5986 16629 6.623549 GCTCATGCAAGTAACAGAGCAAATAA 60.624 38.462 7.29 0.00 45.67 1.40
6007 16661 2.203056 AGCACACACGCAAGCTCA 60.203 55.556 0.00 0.00 45.62 4.26
6008 16662 2.553268 GAGCACACACGCAAGCTC 59.447 61.111 0.00 0.00 45.50 4.09
6016 16671 3.550437 ATCCTCCTTATGAGCACACAC 57.450 47.619 0.00 0.00 39.98 3.82
6020 16675 8.348507 CAGAAAATAAATCCTCCTTATGAGCAC 58.651 37.037 0.00 0.00 39.98 4.40
6033 16688 6.934561 GTGCTGTTCACAGAAAATAAATCC 57.065 37.500 11.29 0.00 46.59 3.01
6209 16887 8.703604 TGAATAGGAGAAAACGTCAATTCTAG 57.296 34.615 10.17 0.00 36.08 2.43
6259 16939 0.454196 AAACAAAGCTGGCGTTCGTT 59.546 45.000 0.00 0.00 0.00 3.85
6420 17101 2.350522 AGTGAAGAGCAGGCGTTAATG 58.649 47.619 0.00 0.00 0.00 1.90
6426 17111 1.446907 ATTCAAGTGAAGAGCAGGCG 58.553 50.000 0.00 0.00 37.48 5.52
6444 17129 5.005971 GCATTCTGCGCAATTGAATTGTTAT 59.994 36.000 17.78 0.00 36.74 1.89
6562 17248 3.382803 GAGAGCAGCACGGCCAGAT 62.383 63.158 2.24 0.00 0.00 2.90
6624 17310 1.143838 CGGAAGACATGATCGGCCA 59.856 57.895 2.24 0.00 0.00 5.36
6633 17319 1.296715 GCTGGTGGACGGAAGACAT 59.703 57.895 0.00 0.00 0.00 3.06
6694 17401 6.029346 CATGGAATGGAAAGTTAAACAGCT 57.971 37.500 0.00 0.00 41.79 4.24
6756 17463 4.919754 GGACAAGTTGCAAAGCTAGAATTG 59.080 41.667 0.00 0.00 0.00 2.32
6808 17522 4.501071 CATCAAGGAAAATGGAGCAAAGG 58.499 43.478 0.00 0.00 0.00 3.11
6885 17608 7.041107 ACCATGGTGAAATATTTACAATGCAC 58.959 34.615 18.99 4.03 0.00 4.57
6993 17724 4.141981 ACATGAGCAACACCAACAAATCAA 60.142 37.500 0.00 0.00 0.00 2.57
7000 17731 2.933769 GCTAACATGAGCAACACCAAC 58.066 47.619 0.00 0.00 42.36 3.77
7034 17765 1.592400 GCCGGAAGTAGCCCCAAAAC 61.592 60.000 5.05 0.00 0.00 2.43
7043 17774 0.108138 CTTGGGAGTGCCGGAAGTAG 60.108 60.000 5.05 0.00 33.83 2.57
7070 17805 4.933400 ACATTTTAGACGCGGTTTATGAGT 59.067 37.500 12.47 0.00 0.00 3.41
7075 17810 4.510711 TCACAACATTTTAGACGCGGTTTA 59.489 37.500 12.47 0.00 0.00 2.01
7076 17811 3.312973 TCACAACATTTTAGACGCGGTTT 59.687 39.130 12.47 0.00 0.00 3.27
7077 17812 2.873472 TCACAACATTTTAGACGCGGTT 59.127 40.909 12.47 0.00 0.00 4.44
7078 17813 2.485903 TCACAACATTTTAGACGCGGT 58.514 42.857 12.47 0.00 0.00 5.68
7079 17814 3.529634 TTCACAACATTTTAGACGCGG 57.470 42.857 12.47 0.00 0.00 6.46
7080 17815 6.432802 AAATTTCACAACATTTTAGACGCG 57.567 33.333 3.53 3.53 0.00 6.01
7081 17816 8.324567 TGAAAAATTTCACAACATTTTAGACGC 58.675 29.630 4.52 0.00 41.88 5.19
7122 17857 7.423199 TGTGACCTGACTAATATTCGTATGTC 58.577 38.462 0.00 0.93 0.00 3.06
7135 17870 6.665992 ACTTGATACTTTGTGACCTGACTA 57.334 37.500 0.00 0.00 0.00 2.59
7141 17876 5.643777 AGCACATACTTGATACTTTGTGACC 59.356 40.000 5.14 0.00 37.28 4.02
7142 17877 6.147821 ACAGCACATACTTGATACTTTGTGAC 59.852 38.462 5.14 0.00 37.28 3.67
7176 17911 2.552315 ACCAACCACGTTGAATGCTAAG 59.448 45.455 6.09 0.00 45.28 2.18
7205 17940 4.939271 TCACGTCAGTTACAGTTGATGAA 58.061 39.130 0.71 0.00 35.00 2.57
7222 17976 8.868916 GCCAATTTCATGTAATTTAATTCACGT 58.131 29.630 7.50 0.00 0.00 4.49
7236 17990 4.321230 GGAAGAGTTTCGCCAATTTCATGT 60.321 41.667 0.00 0.00 33.98 3.21
7294 18054 1.917872 TTGCATCCACCCTTTGGTAC 58.082 50.000 0.00 0.00 45.57 3.34
7308 18068 7.163441 AGAAGGCTGTAATTTCATTTTTGCAT 58.837 30.769 0.00 0.00 0.00 3.96
7310 18070 8.532977 TTAGAAGGCTGTAATTTCATTTTTGC 57.467 30.769 0.00 0.00 0.00 3.68
7349 18109 5.817816 TGGTTGCGGTTGTAATTTCATTTTT 59.182 32.000 0.00 0.00 0.00 1.94
7350 18110 5.360591 TGGTTGCGGTTGTAATTTCATTTT 58.639 33.333 0.00 0.00 0.00 1.82
7351 18111 4.950050 TGGTTGCGGTTGTAATTTCATTT 58.050 34.783 0.00 0.00 0.00 2.32
7352 18112 4.555262 CTGGTTGCGGTTGTAATTTCATT 58.445 39.130 0.00 0.00 0.00 2.57
7353 18113 3.056891 CCTGGTTGCGGTTGTAATTTCAT 60.057 43.478 0.00 0.00 0.00 2.57
7382 18142 7.431084 GTGATCTTCTCTCGAGATTTGTAAGAC 59.569 40.741 17.03 13.18 37.29 3.01
7396 18156 9.474920 CTGTTCTATAATTGGTGATCTTCTCTC 57.525 37.037 0.00 0.00 0.00 3.20
7413 18173 5.626142 TGGTGTCTTTTTGCCTGTTCTATA 58.374 37.500 0.00 0.00 0.00 1.31
7437 18197 5.298276 TCGTGGTGACTTTCTTTAGCATTTT 59.702 36.000 0.00 0.00 0.00 1.82
7438 18198 4.819630 TCGTGGTGACTTTCTTTAGCATTT 59.180 37.500 0.00 0.00 0.00 2.32
7448 18211 2.067013 GGTAGCTTCGTGGTGACTTTC 58.933 52.381 0.00 0.00 0.00 2.62
7453 18216 2.623878 TTTTGGTAGCTTCGTGGTGA 57.376 45.000 0.00 0.00 0.00 4.02
7463 18226 6.446318 TGTCATGTTCTGAAATTTTGGTAGC 58.554 36.000 0.00 0.00 35.07 3.58
7466 18229 6.041865 TGGATGTCATGTTCTGAAATTTTGGT 59.958 34.615 0.00 0.00 31.54 3.67
7468 18231 9.642327 TTATGGATGTCATGTTCTGAAATTTTG 57.358 29.630 0.00 0.00 31.54 2.44
7482 18245 7.562454 ACCTTGTGATCATTTTATGGATGTCAT 59.438 33.333 0.00 0.00 39.78 3.06
7483 18246 6.891361 ACCTTGTGATCATTTTATGGATGTCA 59.109 34.615 0.00 0.00 0.00 3.58
7484 18247 7.338800 ACCTTGTGATCATTTTATGGATGTC 57.661 36.000 0.00 0.00 0.00 3.06
7486 18249 7.811236 GCATACCTTGTGATCATTTTATGGATG 59.189 37.037 0.00 0.08 0.00 3.51
7488 18251 6.832900 TGCATACCTTGTGATCATTTTATGGA 59.167 34.615 0.00 1.30 0.00 3.41
7489 18252 6.919662 GTGCATACCTTGTGATCATTTTATGG 59.080 38.462 0.00 1.18 0.00 2.74
7490 18253 6.634035 CGTGCATACCTTGTGATCATTTTATG 59.366 38.462 0.00 3.90 0.00 1.90
7491 18254 6.318648 ACGTGCATACCTTGTGATCATTTTAT 59.681 34.615 0.00 0.00 0.00 1.40
7493 18256 4.458989 ACGTGCATACCTTGTGATCATTTT 59.541 37.500 0.00 0.00 0.00 1.82
7495 18258 3.609853 ACGTGCATACCTTGTGATCATT 58.390 40.909 0.00 0.00 0.00 2.57
7496 18259 3.266510 ACGTGCATACCTTGTGATCAT 57.733 42.857 0.00 0.00 0.00 2.45
7498 18261 5.734855 ATTAACGTGCATACCTTGTGATC 57.265 39.130 0.00 0.00 0.00 2.92
7501 18264 7.468441 TGAATAATTAACGTGCATACCTTGTG 58.532 34.615 0.00 0.00 0.00 3.33
7502 18265 7.618502 TGAATAATTAACGTGCATACCTTGT 57.381 32.000 0.00 0.00 0.00 3.16
7503 18266 8.903570 TTTGAATAATTAACGTGCATACCTTG 57.096 30.769 0.00 0.00 0.00 3.61
7504 18267 9.515020 CATTTGAATAATTAACGTGCATACCTT 57.485 29.630 0.00 0.00 0.00 3.50
7505 18268 7.647715 GCATTTGAATAATTAACGTGCATACCT 59.352 33.333 0.00 0.00 0.00 3.08
7506 18269 7.096230 GGCATTTGAATAATTAACGTGCATACC 60.096 37.037 0.00 0.00 0.00 2.73
7507 18270 7.096230 GGGCATTTGAATAATTAACGTGCATAC 60.096 37.037 0.00 0.00 0.00 2.39
7547 18310 2.807045 CAGTGCCGCAGTCTCGTC 60.807 66.667 0.00 0.00 0.00 4.20
7559 18322 2.977578 TCCTAGACAGGGACAGTGC 58.022 57.895 0.00 0.00 42.87 4.40
7567 18330 5.246429 GGGGATAATGTTAGTCCTAGACAGG 59.754 48.000 0.00 0.00 44.17 4.00
7578 18341 6.663734 AGGAAAAGAGTGGGGATAATGTTAG 58.336 40.000 0.00 0.00 0.00 2.34
7581 18344 4.540099 TGAGGAAAAGAGTGGGGATAATGT 59.460 41.667 0.00 0.00 0.00 2.71
7582 18345 5.116084 TGAGGAAAAGAGTGGGGATAATG 57.884 43.478 0.00 0.00 0.00 1.90
7583 18346 6.347061 AATGAGGAAAAGAGTGGGGATAAT 57.653 37.500 0.00 0.00 0.00 1.28
7586 18349 4.604156 GAAATGAGGAAAAGAGTGGGGAT 58.396 43.478 0.00 0.00 0.00 3.85
7592 18355 4.275936 CACCAACGAAATGAGGAAAAGAGT 59.724 41.667 0.00 0.00 0.00 3.24
7601 18364 5.996219 TGATAAACACACCAACGAAATGAG 58.004 37.500 0.00 0.00 0.00 2.90
7626 18389 1.725557 GCTCCACATGCCATCTGCTG 61.726 60.000 0.00 0.00 42.00 4.41
7647 18410 2.996621 CAGATCCCAGAAAACGAGACAC 59.003 50.000 0.00 0.00 0.00 3.67
7655 18418 5.455392 TGGATTCATCAGATCCCAGAAAA 57.545 39.130 1.03 0.00 33.65 2.29
7656 18419 5.628130 GATGGATTCATCAGATCCCAGAAA 58.372 41.667 9.27 0.00 46.74 2.52
7657 18420 5.238624 GATGGATTCATCAGATCCCAGAA 57.761 43.478 9.27 0.00 46.74 3.02
7658 18421 4.904895 GATGGATTCATCAGATCCCAGA 57.095 45.455 9.27 0.00 46.74 3.86
7668 18431 4.187694 GGCCGAATCTAGATGGATTCATC 58.812 47.826 16.21 5.78 46.94 2.92
7669 18432 3.584406 TGGCCGAATCTAGATGGATTCAT 59.416 43.478 16.21 0.00 46.94 2.57
7670 18433 2.972021 TGGCCGAATCTAGATGGATTCA 59.028 45.455 16.21 0.44 46.94 2.57
7671 18434 3.594134 CTGGCCGAATCTAGATGGATTC 58.406 50.000 5.86 8.44 44.62 2.52
7672 18435 2.289945 GCTGGCCGAATCTAGATGGATT 60.290 50.000 5.86 0.00 38.47 3.01
7673 18436 1.277557 GCTGGCCGAATCTAGATGGAT 59.722 52.381 5.86 0.00 0.00 3.41
7674 18437 0.681733 GCTGGCCGAATCTAGATGGA 59.318 55.000 5.86 0.00 0.00 3.41
7675 18438 0.683973 AGCTGGCCGAATCTAGATGG 59.316 55.000 5.86 5.34 0.00 3.51
7676 18439 2.540265 AAGCTGGCCGAATCTAGATG 57.460 50.000 5.86 0.00 0.00 2.90
7677 18440 2.435805 TGAAAGCTGGCCGAATCTAGAT 59.564 45.455 0.00 0.00 0.00 1.98
7678 18441 1.831106 TGAAAGCTGGCCGAATCTAGA 59.169 47.619 0.00 0.00 0.00 2.43
7679 18442 2.315925 TGAAAGCTGGCCGAATCTAG 57.684 50.000 0.00 0.00 0.00 2.43
7680 18443 2.564771 CATGAAAGCTGGCCGAATCTA 58.435 47.619 0.00 0.00 0.00 1.98
7681 18444 1.386533 CATGAAAGCTGGCCGAATCT 58.613 50.000 0.00 0.00 0.00 2.40
7682 18445 0.383231 CCATGAAAGCTGGCCGAATC 59.617 55.000 0.00 0.00 0.00 2.52
7683 18446 0.323725 ACCATGAAAGCTGGCCGAAT 60.324 50.000 0.00 0.00 37.27 3.34
7684 18447 0.960364 GACCATGAAAGCTGGCCGAA 60.960 55.000 0.00 0.00 37.27 4.30
7685 18448 1.377202 GACCATGAAAGCTGGCCGA 60.377 57.895 0.00 0.00 37.27 5.54
7686 18449 3.190878 GACCATGAAAGCTGGCCG 58.809 61.111 0.00 0.00 37.27 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.