Multiple sequence alignment - TraesCS1B01G396000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G396000 chr1B 100.000 4271 0 0 1 4271 627930186 627925916 0.000000e+00 7888.0
1 TraesCS1B01G396000 chr1B 85.393 356 28 9 3455 3804 627890438 627890101 8.790000e-92 348.0
2 TraesCS1B01G396000 chr1B 86.611 239 26 3 3197 3431 627890665 627890429 4.240000e-65 259.0
3 TraesCS1B01G396000 chr1B 80.726 358 38 13 3451 3805 627797377 627797048 2.550000e-62 250.0
4 TraesCS1B01G396000 chr1B 88.298 188 14 2 2651 2837 627921362 627921182 7.190000e-53 219.0
5 TraesCS1B01G396000 chr1B 85.556 90 13 0 3343 3432 627797453 627797364 1.260000e-15 95.3
6 TraesCS1B01G396000 chr1B 95.455 44 2 0 4201 4244 642603710 642603753 2.130000e-08 71.3
7 TraesCS1B01G396000 chr1B 97.436 39 1 0 3954 3992 627796990 627796952 2.760000e-07 67.6
8 TraesCS1B01G396000 chr1D 93.929 2372 81 21 1667 4012 457851516 457849182 0.000000e+00 3524.0
9 TraesCS1B01G396000 chr1D 85.354 1072 64 41 467 1469 457852763 457851716 0.000000e+00 1024.0
10 TraesCS1B01G396000 chr1D 83.611 360 47 10 3 357 426443345 426442993 1.150000e-85 327.0
11 TraesCS1B01G396000 chr1D 83.934 361 32 11 3451 3804 457843926 457843585 5.330000e-84 322.0
12 TraesCS1B01G396000 chr1D 93.496 123 7 1 4070 4192 17277121 17277000 9.430000e-42 182.0
13 TraesCS1B01G396000 chr1D 98.077 104 2 0 1562 1665 457851718 457851615 9.430000e-42 182.0
14 TraesCS1B01G396000 chr1A 94.424 2206 68 16 1667 3845 550313608 550311431 0.000000e+00 3341.0
15 TraesCS1B01G396000 chr1A 82.574 1733 156 73 1 1665 550315362 550313708 0.000000e+00 1393.0
16 TraesCS1B01G396000 chr1A 89.236 288 29 2 2651 2936 550215728 550215441 4.060000e-95 359.0
17 TraesCS1B01G396000 chr1A 83.708 356 51 7 2 355 347675243 347674893 3.180000e-86 329.0
18 TraesCS1B01G396000 chr1A 82.527 372 57 8 3 371 386475902 386476268 1.920000e-83 320.0
19 TraesCS1B01G396000 chr1A 84.412 340 30 6 3100 3435 550215443 550215123 3.210000e-81 313.0
20 TraesCS1B01G396000 chr1A 93.413 167 11 0 3261 3427 550213480 550213314 9.170000e-62 248.0
21 TraesCS1B01G396000 chr1A 92.929 99 6 1 3947 4045 550311431 550311334 4.450000e-30 143.0
22 TraesCS1B01G396000 chr1A 90.291 103 5 2 3588 3685 550220646 550220544 3.470000e-26 130.0
23 TraesCS1B01G396000 chr1A 90.588 85 8 0 3700 3784 550213043 550212959 3.490000e-21 113.0
24 TraesCS1B01G396000 chr3D 84.034 357 49 8 1 355 612703726 612703376 1.900000e-88 337.0
25 TraesCS1B01G396000 chr3D 83.243 370 49 12 1 365 562514252 562514613 1.150000e-85 327.0
26 TraesCS1B01G396000 chr3D 80.000 200 33 7 1137 1333 388534452 388534257 1.600000e-29 141.0
27 TraesCS1B01G396000 chr6A 83.944 355 50 7 3 355 540151392 540151741 2.460000e-87 333.0
28 TraesCS1B01G396000 chr6A 81.250 288 29 16 3110 3386 99421888 99421615 4.330000e-50 209.0
29 TraesCS1B01G396000 chr5D 83.243 370 50 12 1 365 318867581 318867943 3.180000e-86 329.0
30 TraesCS1B01G396000 chr5D 81.818 231 38 4 1096 1324 461440849 461440621 1.570000e-44 191.0
31 TraesCS1B01G396000 chr5D 94.309 123 6 1 4070 4192 551749671 551749792 2.030000e-43 187.0
32 TraesCS1B01G396000 chr5D 93.496 123 7 1 4070 4192 240377214 240377335 9.430000e-42 182.0
33 TraesCS1B01G396000 chr5D 93.496 123 7 1 4070 4192 388272441 388272562 9.430000e-42 182.0
34 TraesCS1B01G396000 chr5D 93.496 123 7 1 4070 4192 487461266 487461145 9.430000e-42 182.0
35 TraesCS1B01G396000 chr5D 89.041 73 6 2 4197 4268 16150277 16150206 5.880000e-14 89.8
36 TraesCS1B01G396000 chr3B 83.287 359 51 7 1 357 790586852 790587203 5.330000e-84 322.0
37 TraesCS1B01G396000 chr3B 97.273 110 3 0 3841 3950 750136325 750136216 2.030000e-43 187.0
38 TraesCS1B01G396000 chr3B 90.385 52 3 2 4195 4244 727132954 727133005 2.760000e-07 67.6
39 TraesCS1B01G396000 chr7B 82.385 369 53 11 1 365 339619201 339619561 1.150000e-80 311.0
40 TraesCS1B01G396000 chr7B 98.148 108 2 0 3842 3949 328806674 328806567 5.640000e-44 189.0
41 TraesCS1B01G396000 chr7B 92.000 50 4 0 4202 4251 426340467 426340516 2.130000e-08 71.3
42 TraesCS1B01G396000 chr4D 89.177 231 24 1 1099 1328 447639112 447639342 1.940000e-73 287.0
43 TraesCS1B01G396000 chr4D 94.309 123 6 1 4070 4192 131743928 131743807 2.030000e-43 187.0
44 TraesCS1B01G396000 chr4B 87.449 247 28 3 1099 1343 560012808 560013053 9.040000e-72 281.0
45 TraesCS1B01G396000 chr4B 95.455 44 2 0 4201 4244 89360386 89360429 2.130000e-08 71.3
46 TraesCS1B01G396000 chr4A 87.045 247 29 3 1099 1343 19622533 19622288 4.210000e-70 276.0
47 TraesCS1B01G396000 chr6B 83.333 264 27 12 3181 3432 157666177 157666435 1.190000e-55 228.0
48 TraesCS1B01G396000 chr6D 79.141 326 36 20 3101 3414 82640089 82640394 3.370000e-46 196.0
49 TraesCS1B01G396000 chr5A 81.739 230 40 2 1096 1324 581488149 581487921 1.570000e-44 191.0
50 TraesCS1B01G396000 chr5A 90.769 130 10 2 3832 3960 569557322 569557194 5.680000e-39 172.0
51 TraesCS1B01G396000 chr5A 87.671 73 6 3 4197 4268 6934541 6934611 9.840000e-12 82.4
52 TraesCS1B01G396000 chr3A 97.248 109 3 0 3840 3948 114429442 114429550 7.290000e-43 185.0
53 TraesCS1B01G396000 chr3A 79.126 206 36 7 1137 1339 509798927 509798726 7.450000e-28 135.0
54 TraesCS1B01G396000 chr2D 93.600 125 7 1 3834 3958 62385916 62385793 7.290000e-43 185.0
55 TraesCS1B01G396000 chr2D 97.222 108 3 0 3842 3949 513035485 513035592 2.620000e-42 183.0
56 TraesCS1B01G396000 chr2D 93.496 123 7 1 4070 4192 5939847 5939726 9.430000e-42 182.0
57 TraesCS1B01G396000 chr2B 94.167 120 7 0 3831 3950 25365974 25366093 2.620000e-42 183.0
58 TraesCS1B01G396000 chrUn 93.496 123 7 1 4070 4192 346955260 346955381 9.430000e-42 182.0
59 TraesCS1B01G396000 chrUn 92.683 123 8 1 4070 4192 29618490 29618369 4.390000e-40 176.0
60 TraesCS1B01G396000 chrUn 86.364 66 8 1 4204 4269 79696260 79696324 2.130000e-08 71.3
61 TraesCS1B01G396000 chr5B 93.443 122 6 2 3839 3959 697185044 697184924 3.390000e-41 180.0
62 TraesCS1B01G396000 chr2A 90.152 132 11 2 3818 3948 17753853 17753983 2.040000e-38 171.0
63 TraesCS1B01G396000 chr7D 93.878 49 1 2 4201 4247 264057375 264057423 5.920000e-09 73.1
64 TraesCS1B01G396000 chr7D 89.474 57 5 1 4201 4256 130102008 130101952 2.130000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G396000 chr1B 627925916 627930186 4270 True 7888.000000 7888 100.000000 1 4271 1 chr1B.!!$R2 4270
1 TraesCS1B01G396000 chr1B 627890101 627890665 564 True 303.500000 348 86.002000 3197 3804 2 chr1B.!!$R4 607
2 TraesCS1B01G396000 chr1D 457849182 457852763 3581 True 1576.666667 3524 92.453333 467 4012 3 chr1D.!!$R4 3545
3 TraesCS1B01G396000 chr1A 550311334 550315362 4028 True 1625.666667 3341 89.975667 1 4045 3 chr1A.!!$R4 4044
4 TraesCS1B01G396000 chr1A 550212959 550215728 2769 True 258.250000 359 89.412250 2651 3784 4 chr1A.!!$R3 1133

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
263 264 0.105964 TCAGTACTTGCAGCCGTTGT 59.894 50.0 0.00 0.0 0.00 3.32 F
826 867 0.172578 GCCCACCATTTCTTTACCGC 59.827 55.0 0.00 0.0 0.00 5.68 F
880 921 0.179134 CCCGAGATATCCCGCGATTC 60.179 60.0 8.23 0.0 0.00 2.52 F
1042 1108 0.390472 CGTTGTGAAGGAGGAGGAGC 60.390 60.0 0.00 0.0 0.00 4.70 F
1878 2077 0.391661 TCCTGCAACGAGCTTCATCC 60.392 55.0 6.22 0.0 45.94 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1856 2055 0.035317 TGAAGCTCGTTGCAGGACAT 59.965 50.000 6.03 0.00 45.94 3.06 R
1867 2066 1.874019 CACCGTCGGATGAAGCTCG 60.874 63.158 20.51 0.00 0.00 5.03 R
1878 2077 2.021068 ATCTCCATGCCTCACCGTCG 62.021 60.000 0.00 0.00 0.00 5.12 R
2888 3111 1.556911 CTCAGATACCCCAACTGCTGT 59.443 52.381 0.00 0.00 0.00 4.40 R
3570 5627 0.245539 ACCAACCGAATGTCGACGAT 59.754 50.000 11.62 1.24 43.74 3.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 1.445582 GGTGTGTCACCGACGGATC 60.446 63.158 23.38 10.57 44.95 3.36
23 24 0.242825 TGTCACCGACGGATCTGTTC 59.757 55.000 23.38 7.32 34.95 3.18
24 25 0.526662 GTCACCGACGGATCTGTTCT 59.473 55.000 23.38 0.00 0.00 3.01
27 28 0.246635 ACCGACGGATCTGTTCTTGG 59.753 55.000 23.38 10.99 0.00 3.61
39 40 1.879380 TGTTCTTGGTGGATTTGCTCG 59.121 47.619 0.00 0.00 0.00 5.03
43 44 1.672881 CTTGGTGGATTTGCTCGGATC 59.327 52.381 0.00 0.00 0.00 3.36
61 62 3.814283 GGATCTGGTCGTAGTTCGTCTAT 59.186 47.826 0.00 0.00 40.80 1.98
77 78 8.999431 AGTTCGTCTATGTTCATGTGTTTTTAT 58.001 29.630 0.00 0.00 0.00 1.40
81 82 8.839914 CGTCTATGTTCATGTGTTTTTATGTTG 58.160 33.333 0.00 0.00 0.00 3.33
86 87 7.151308 TGTTCATGTGTTTTTATGTTGGATCC 58.849 34.615 4.20 4.20 0.00 3.36
98 99 3.371034 TGTTGGATCCTTCCGATCTACA 58.629 45.455 14.23 0.99 45.90 2.74
108 109 5.104444 TCCTTCCGATCTACACTACTCTTCT 60.104 44.000 0.00 0.00 0.00 2.85
116 117 0.802607 CACTACTCTTCTTCGGCGGC 60.803 60.000 7.21 0.00 0.00 6.53
117 118 1.248785 ACTACTCTTCTTCGGCGGCA 61.249 55.000 10.53 0.00 0.00 5.69
121 122 0.951040 CTCTTCTTCGGCGGCAGTTT 60.951 55.000 10.53 0.00 0.00 2.66
124 125 0.319083 TTCTTCGGCGGCAGTTTCTA 59.681 50.000 10.53 0.00 0.00 2.10
138 139 1.063174 GTTTCTATTCTGCTGCGCTGG 59.937 52.381 16.47 6.50 0.00 4.85
143 144 2.475371 ATTCTGCTGCGCTGGTCCTT 62.475 55.000 16.47 0.00 0.00 3.36
146 147 3.741476 GCTGCGCTGGTCCTTTGG 61.741 66.667 16.47 0.00 0.00 3.28
149 150 2.044946 GCGCTGGTCCTTTGGGAT 60.045 61.111 0.00 0.00 44.33 3.85
154 155 2.743183 CGCTGGTCCTTTGGGATCTTAG 60.743 54.545 0.00 0.00 43.02 2.18
160 161 3.879892 GTCCTTTGGGATCTTAGCATGAC 59.120 47.826 0.00 0.00 44.33 3.06
166 167 3.181475 TGGGATCTTAGCATGACGACTTC 60.181 47.826 0.00 0.00 0.00 3.01
189 190 5.011329 TCCCGACTGTCTAATACAACAAGTT 59.989 40.000 6.21 0.00 37.74 2.66
192 193 7.288672 CCGACTGTCTAATACAACAAGTTTTC 58.711 38.462 6.21 0.00 37.74 2.29
196 197 5.771165 TGTCTAATACAACAAGTTTTCCCCC 59.229 40.000 0.00 0.00 34.29 5.40
198 199 1.984066 TACAACAAGTTTTCCCCCGG 58.016 50.000 0.00 0.00 0.00 5.73
199 200 1.365999 CAACAAGTTTTCCCCCGGC 59.634 57.895 0.00 0.00 0.00 6.13
200 201 1.112916 CAACAAGTTTTCCCCCGGCT 61.113 55.000 0.00 0.00 0.00 5.52
201 202 0.397957 AACAAGTTTTCCCCCGGCTT 60.398 50.000 0.00 0.00 0.00 4.35
202 203 0.826256 ACAAGTTTTCCCCCGGCTTC 60.826 55.000 0.00 0.00 0.00 3.86
204 205 2.032987 GTTTTCCCCCGGCTTCGA 59.967 61.111 0.00 0.00 35.61 3.71
205 206 2.032987 TTTTCCCCCGGCTTCGAC 59.967 61.111 0.00 0.00 35.61 4.20
206 207 3.887335 TTTTCCCCCGGCTTCGACG 62.887 63.158 0.00 0.00 35.61 5.12
214 215 2.697761 CGGCTTCGACGAGGAAGGA 61.698 63.158 11.60 0.00 42.88 3.36
222 223 1.067846 CGACGAGGAAGGACAATGACA 60.068 52.381 0.00 0.00 0.00 3.58
230 231 3.422303 GACAATGACAGCGGCGCA 61.422 61.111 35.02 14.17 0.00 6.09
231 232 3.651480 GACAATGACAGCGGCGCAC 62.651 63.158 35.02 23.46 0.00 5.34
235 236 4.927782 TGACAGCGGCGCACCTTT 62.928 61.111 35.02 10.19 0.00 3.11
249 250 2.229792 CACCTTTGGCTTGCTTCAGTA 58.770 47.619 0.00 0.00 0.00 2.74
250 251 2.030805 CACCTTTGGCTTGCTTCAGTAC 60.031 50.000 0.00 0.00 0.00 2.73
254 255 1.238439 TGGCTTGCTTCAGTACTTGC 58.762 50.000 0.00 0.00 0.00 4.01
257 258 1.400759 GCTTGCTTCAGTACTTGCAGC 60.401 52.381 12.69 11.28 44.96 5.25
261 262 1.512926 CTTCAGTACTTGCAGCCGTT 58.487 50.000 0.00 0.00 0.00 4.44
263 264 0.105964 TCAGTACTTGCAGCCGTTGT 59.894 50.000 0.00 0.00 0.00 3.32
266 267 2.157668 CAGTACTTGCAGCCGTTGTTAG 59.842 50.000 0.00 0.00 0.00 2.34
290 293 7.633789 AGGTGGTCTACAGATTTGAATGTAAT 58.366 34.615 0.00 0.00 31.81 1.89
377 380 9.959749 TTTTCTAAAGAAAAGTATGTGCGATTT 57.040 25.926 12.68 0.00 45.76 2.17
378 381 8.948853 TTCTAAAGAAAAGTATGTGCGATTTG 57.051 30.769 0.00 0.00 0.00 2.32
379 382 8.317891 TCTAAAGAAAAGTATGTGCGATTTGA 57.682 30.769 0.00 0.00 0.00 2.69
380 383 8.227791 TCTAAAGAAAAGTATGTGCGATTTGAC 58.772 33.333 0.00 0.00 0.00 3.18
381 384 6.560253 AAGAAAAGTATGTGCGATTTGACT 57.440 33.333 0.00 0.00 0.00 3.41
382 385 6.170675 AGAAAAGTATGTGCGATTTGACTC 57.829 37.500 0.00 0.00 0.00 3.36
383 386 5.700832 AGAAAAGTATGTGCGATTTGACTCA 59.299 36.000 0.00 0.00 0.00 3.41
384 387 5.536554 AAAGTATGTGCGATTTGACTCAG 57.463 39.130 0.00 0.00 0.00 3.35
385 388 3.525537 AGTATGTGCGATTTGACTCAGG 58.474 45.455 0.00 0.00 0.00 3.86
386 389 1.742761 ATGTGCGATTTGACTCAGGG 58.257 50.000 0.00 0.00 0.00 4.45
396 402 1.419381 TGACTCAGGGTACAAGTGCA 58.581 50.000 0.00 0.00 0.00 4.57
439 445 4.693532 TGATTGGCAGACGACACC 57.306 55.556 0.00 0.00 0.00 4.16
444 450 2.050836 TTGGCAGACGACACCACCAT 62.051 55.000 0.00 0.00 31.83 3.55
445 451 2.034879 GGCAGACGACACCACCATG 61.035 63.158 0.00 0.00 0.00 3.66
446 452 2.680913 GCAGACGACACCACCATGC 61.681 63.158 0.00 0.00 0.00 4.06
447 453 1.301637 CAGACGACACCACCATGCA 60.302 57.895 0.00 0.00 0.00 3.96
448 454 1.301716 AGACGACACCACCATGCAC 60.302 57.895 0.00 0.00 0.00 4.57
449 455 1.596752 GACGACACCACCATGCACA 60.597 57.895 0.00 0.00 0.00 4.57
451 457 1.165907 ACGACACCACCATGCACAAG 61.166 55.000 0.00 0.00 0.00 3.16
452 458 1.165907 CGACACCACCATGCACAAGT 61.166 55.000 0.00 0.00 0.00 3.16
453 459 1.032014 GACACCACCATGCACAAGTT 58.968 50.000 0.00 0.00 0.00 2.66
454 460 1.408702 GACACCACCATGCACAAGTTT 59.591 47.619 0.00 0.00 0.00 2.66
455 461 1.830477 ACACCACCATGCACAAGTTTT 59.170 42.857 0.00 0.00 0.00 2.43
456 462 2.235898 ACACCACCATGCACAAGTTTTT 59.764 40.909 0.00 0.00 0.00 1.94
479 487 1.790755 TTAGGCGTGTGCAGTAACAG 58.209 50.000 0.00 0.00 45.35 3.16
497 505 9.884465 CAGTAACAGAAAACAGAAAAATCTAGG 57.116 33.333 0.00 0.00 0.00 3.02
537 548 4.580995 TCTTTCCAAGGCATAAAACAACGA 59.419 37.500 0.00 0.00 0.00 3.85
551 562 1.228552 AACGAAGCAGTTGGGCCAT 60.229 52.632 7.26 0.00 32.39 4.40
806 847 2.310647 TCCCTCATTTCTTTACCCACCC 59.689 50.000 0.00 0.00 0.00 4.61
807 848 2.365582 CCTCATTTCTTTACCCACCCG 58.634 52.381 0.00 0.00 0.00 5.28
808 849 1.743394 CTCATTTCTTTACCCACCCGC 59.257 52.381 0.00 0.00 0.00 6.13
809 850 0.815095 CATTTCTTTACCCACCCGCC 59.185 55.000 0.00 0.00 0.00 6.13
810 851 0.323999 ATTTCTTTACCCACCCGCCC 60.324 55.000 0.00 0.00 0.00 6.13
811 852 1.717038 TTTCTTTACCCACCCGCCCA 61.717 55.000 0.00 0.00 0.00 5.36
813 854 3.931190 CTTTACCCACCCGCCCACC 62.931 68.421 0.00 0.00 0.00 4.61
818 859 3.068064 CCACCCGCCCACCATTTC 61.068 66.667 0.00 0.00 0.00 2.17
819 860 2.035626 CACCCGCCCACCATTTCT 59.964 61.111 0.00 0.00 0.00 2.52
820 861 1.606313 CACCCGCCCACCATTTCTT 60.606 57.895 0.00 0.00 0.00 2.52
821 862 1.155155 ACCCGCCCACCATTTCTTT 59.845 52.632 0.00 0.00 0.00 2.52
822 863 0.406361 ACCCGCCCACCATTTCTTTA 59.594 50.000 0.00 0.00 0.00 1.85
823 864 0.815095 CCCGCCCACCATTTCTTTAC 59.185 55.000 0.00 0.00 0.00 2.01
824 865 0.815095 CCGCCCACCATTTCTTTACC 59.185 55.000 0.00 0.00 0.00 2.85
825 866 0.450184 CGCCCACCATTTCTTTACCG 59.550 55.000 0.00 0.00 0.00 4.02
826 867 0.172578 GCCCACCATTTCTTTACCGC 59.827 55.000 0.00 0.00 0.00 5.68
827 868 1.540267 CCCACCATTTCTTTACCGCA 58.460 50.000 0.00 0.00 0.00 5.69
828 869 1.201414 CCCACCATTTCTTTACCGCAC 59.799 52.381 0.00 0.00 0.00 5.34
829 870 1.135803 CCACCATTTCTTTACCGCACG 60.136 52.381 0.00 0.00 0.00 5.34
840 881 3.853831 TTACCGCACGACAAAGATCTA 57.146 42.857 0.00 0.00 0.00 1.98
841 882 2.961526 ACCGCACGACAAAGATCTAT 57.038 45.000 0.00 0.00 0.00 1.98
860 901 4.830765 CCGCCGCCTTCGATTCCA 62.831 66.667 0.00 0.00 38.10 3.53
861 902 3.564027 CGCCGCCTTCGATTCCAC 61.564 66.667 0.00 0.00 38.10 4.02
864 905 2.890474 CGCCTTCGATTCCACCCG 60.890 66.667 0.00 0.00 38.10 5.28
866 907 1.521681 GCCTTCGATTCCACCCGAG 60.522 63.158 0.00 0.00 36.11 4.63
868 909 0.753262 CCTTCGATTCCACCCGAGAT 59.247 55.000 0.00 0.00 36.11 2.75
873 914 1.204941 CGATTCCACCCGAGATATCCC 59.795 57.143 0.00 0.00 0.00 3.85
874 915 1.204941 GATTCCACCCGAGATATCCCG 59.795 57.143 0.00 0.00 0.00 5.14
875 916 1.469335 TTCCACCCGAGATATCCCGC 61.469 60.000 0.34 0.00 0.00 6.13
876 917 2.258591 CACCCGAGATATCCCGCG 59.741 66.667 0.00 0.00 0.00 6.46
877 918 2.114625 ACCCGAGATATCCCGCGA 59.885 61.111 8.23 0.00 0.00 5.87
878 919 1.304217 ACCCGAGATATCCCGCGAT 60.304 57.895 8.23 0.00 0.00 4.58
879 920 0.898789 ACCCGAGATATCCCGCGATT 60.899 55.000 8.23 0.00 0.00 3.34
880 921 0.179134 CCCGAGATATCCCGCGATTC 60.179 60.000 8.23 0.00 0.00 2.52
881 922 0.179134 CCGAGATATCCCGCGATTCC 60.179 60.000 8.23 0.00 0.00 3.01
882 923 0.526211 CGAGATATCCCGCGATTCCA 59.474 55.000 8.23 0.00 0.00 3.53
883 924 1.732732 CGAGATATCCCGCGATTCCAC 60.733 57.143 8.23 0.00 0.00 4.02
884 925 0.608640 AGATATCCCGCGATTCCACC 59.391 55.000 8.23 0.00 0.00 4.61
885 926 0.391263 GATATCCCGCGATTCCACCC 60.391 60.000 8.23 0.00 0.00 4.61
886 927 2.167398 ATATCCCGCGATTCCACCCG 62.167 60.000 8.23 0.00 0.00 5.28
888 929 4.891727 CCCGCGATTCCACCCGAG 62.892 72.222 8.23 0.00 0.00 4.63
936 977 1.825474 TCCGATCCGAGCTTCTTCTTT 59.175 47.619 0.00 0.00 0.00 2.52
938 979 2.197577 CGATCCGAGCTTCTTCTTTCC 58.802 52.381 0.00 0.00 0.00 3.13
961 1010 2.358737 CCGCCGGCAGAGTTTCTT 60.359 61.111 28.98 0.00 0.00 2.52
966 1015 1.302832 CGGCAGAGTTTCTTGGGCT 60.303 57.895 0.00 0.00 0.00 5.19
974 1023 2.814336 GAGTTTCTTGGGCTTGATTCGT 59.186 45.455 0.00 0.00 0.00 3.85
975 1024 2.554032 AGTTTCTTGGGCTTGATTCGTG 59.446 45.455 0.00 0.00 0.00 4.35
985 1042 2.975851 GCTTGATTCGTGTTCTTGCTTG 59.024 45.455 0.00 0.00 0.00 4.01
988 1045 0.598065 ATTCGTGTTCTTGCTTGGGC 59.402 50.000 0.00 0.00 39.26 5.36
1042 1108 0.390472 CGTTGTGAAGGAGGAGGAGC 60.390 60.000 0.00 0.00 0.00 4.70
1197 1281 2.520020 ACGGACCAGGTCGTGTCA 60.520 61.111 13.80 0.00 38.25 3.58
1254 1338 4.717629 CACGTCTTCGCCGAGGCA 62.718 66.667 15.03 0.00 42.06 4.75
1325 1409 4.177026 CAGCTCAACACCTATGTGAGTAC 58.823 47.826 5.05 0.00 45.76 2.73
1326 1410 4.081972 CAGCTCAACACCTATGTGAGTACT 60.082 45.833 5.05 0.00 45.76 2.73
1331 1420 4.436242 ACACCTATGTGAGTACTCAACG 57.564 45.455 26.74 14.37 45.76 4.10
1364 1453 2.625737 CTGTGTCCTGGTGCTGATTAG 58.374 52.381 0.00 0.00 0.00 1.73
1374 1463 4.253685 TGGTGCTGATTAGTCTTGCTAAC 58.746 43.478 5.70 0.00 41.93 2.34
1381 1470 6.816140 GCTGATTAGTCTTGCTAACTTCTTCT 59.184 38.462 0.00 0.00 41.93 2.85
1394 1483 4.899352 ACTTCTTCTAGTCATGGTGCTT 57.101 40.909 0.00 0.00 0.00 3.91
1436 1526 6.731448 GGTAATAAGGGATGGAGAGGTAGAAT 59.269 42.308 0.00 0.00 0.00 2.40
1440 1530 4.424842 AGGGATGGAGAGGTAGAATCATC 58.575 47.826 0.00 0.00 0.00 2.92
1451 1541 9.471084 GAGAGGTAGAATCATCTTTTAAGCTAC 57.529 37.037 0.00 0.00 37.10 3.58
1534 1624 6.745450 GCATATGCGTGTTTGTATTAACAAGT 59.255 34.615 12.82 0.00 45.99 3.16
1540 1630 5.615984 CGTGTTTGTATTAACAAGTCGGCAT 60.616 40.000 0.00 0.00 45.99 4.40
1546 1636 9.549078 TTTGTATTAACAAGTCGGCATCATATA 57.451 29.630 0.00 0.00 45.99 0.86
1547 1637 9.719355 TTGTATTAACAAGTCGGCATCATATAT 57.281 29.630 0.00 0.00 40.69 0.86
1548 1638 9.719355 TGTATTAACAAGTCGGCATCATATATT 57.281 29.630 0.00 0.00 30.91 1.28
1550 1640 8.846943 ATTAACAAGTCGGCATCATATATTCA 57.153 30.769 0.00 0.00 0.00 2.57
1551 1641 8.846943 TTAACAAGTCGGCATCATATATTCAT 57.153 30.769 0.00 0.00 0.00 2.57
1552 1642 9.936759 TTAACAAGTCGGCATCATATATTCATA 57.063 29.630 0.00 0.00 0.00 2.15
1554 1644 9.453572 AACAAGTCGGCATCATATATTCATATT 57.546 29.630 0.00 0.00 0.00 1.28
1555 1645 9.102757 ACAAGTCGGCATCATATATTCATATTC 57.897 33.333 0.00 0.00 0.00 1.75
1556 1646 9.101655 CAAGTCGGCATCATATATTCATATTCA 57.898 33.333 0.00 0.00 0.00 2.57
1557 1647 9.842775 AAGTCGGCATCATATATTCATATTCAT 57.157 29.630 0.00 0.00 0.00 2.57
1558 1648 9.842775 AGTCGGCATCATATATTCATATTCATT 57.157 29.630 0.00 0.00 0.00 2.57
1661 1751 0.403655 TTGCTGTCCAGGGTAATGCA 59.596 50.000 0.00 0.00 0.00 3.96
1684 1872 3.540617 TGTGCTTCTGTGTGTGTTGTAT 58.459 40.909 0.00 0.00 0.00 2.29
1867 2066 4.156556 TCTTGAAGCAATATGTCCTGCAAC 59.843 41.667 0.26 0.00 41.17 4.17
1878 2077 0.391661 TCCTGCAACGAGCTTCATCC 60.392 55.000 6.22 0.00 45.94 3.51
1944 2145 3.955471 TCCTGACATCATTCCTTGAACC 58.045 45.455 0.00 0.00 38.03 3.62
2030 2231 8.219546 TGTTCTAGAAGACTCTACTGATGATG 57.780 38.462 5.12 0.00 32.70 3.07
2258 2479 1.657751 GAAGGAAGCCGCCATCCAAC 61.658 60.000 13.71 5.07 38.23 3.77
2270 2491 4.812476 TCCAACGCGCCCTCATCG 62.812 66.667 5.73 0.00 0.00 3.84
2490 2711 1.615392 GGTTCTTGGCAAGAGCAATGT 59.385 47.619 34.69 0.00 44.61 2.71
2772 2994 1.849039 AGGATGAAGCTAATGGGCAGT 59.151 47.619 0.00 0.00 34.17 4.40
2879 3102 4.022676 GGAAGGAGACCTGAAGATATCGAC 60.023 50.000 0.00 0.00 32.13 4.20
2888 3111 2.425668 TGAAGATATCGACGAACTGGCA 59.574 45.455 0.00 2.44 0.00 4.92
3005 3228 7.081526 ACTATTGCAGATCATCTTGAACAAC 57.918 36.000 0.00 0.00 0.00 3.32
3224 3458 2.969821 TGGCTTTCCCTCTTTTGCTA 57.030 45.000 0.00 0.00 0.00 3.49
3225 3459 3.456380 TGGCTTTCCCTCTTTTGCTAT 57.544 42.857 0.00 0.00 0.00 2.97
3330 5383 1.405526 CGGAGATTGGACCGTGTTGAT 60.406 52.381 0.00 0.00 43.53 2.57
3332 5385 2.009774 GAGATTGGACCGTGTTGATGG 58.990 52.381 0.00 0.00 0.00 3.51
3481 5534 7.408132 TGTTCTAGAATATAACAATGCTCGC 57.592 36.000 8.75 0.00 35.16 5.03
3534 5588 2.618241 CCCATGACGTGTATTGAATGGG 59.382 50.000 0.00 4.23 46.09 4.00
3570 5627 3.784178 ACTCTGAAGAAGATGGTCCAGA 58.216 45.455 0.00 0.00 33.29 3.86
3587 5644 1.583856 CAGATCGTCGACATTCGGTTG 59.416 52.381 17.16 2.69 40.88 3.77
3591 5648 0.388134 CGTCGACATTCGGTTGGTCT 60.388 55.000 17.16 0.00 40.88 3.85
3665 5722 3.258228 GTTGGGTGAAGTTTTGTTGTGG 58.742 45.455 0.00 0.00 0.00 4.17
3710 5767 1.173913 GCATCTGGGTGTGGGTTTAC 58.826 55.000 0.00 0.00 0.00 2.01
3849 6031 2.115343 CCTTTGCAAGGTACTCCCTC 57.885 55.000 7.87 0.00 45.47 4.30
3850 6032 1.340114 CCTTTGCAAGGTACTCCCTCC 60.340 57.143 7.87 0.00 45.47 4.30
3851 6033 1.351017 CTTTGCAAGGTACTCCCTCCA 59.649 52.381 0.00 0.00 45.47 3.86
3852 6034 1.668826 TTGCAAGGTACTCCCTCCAT 58.331 50.000 0.00 0.00 45.47 3.41
3853 6035 1.668826 TGCAAGGTACTCCCTCCATT 58.331 50.000 0.00 0.00 45.47 3.16
3854 6036 1.992557 TGCAAGGTACTCCCTCCATTT 59.007 47.619 0.00 0.00 45.47 2.32
3855 6037 2.290896 TGCAAGGTACTCCCTCCATTTG 60.291 50.000 0.00 0.00 45.47 2.32
3856 6038 2.945890 GCAAGGTACTCCCTCCATTTGG 60.946 54.545 0.00 0.00 45.47 3.28
3857 6039 2.576191 CAAGGTACTCCCTCCATTTGGA 59.424 50.000 0.00 0.00 45.47 3.53
3858 6040 2.929301 AGGTACTCCCTCCATTTGGAA 58.071 47.619 0.18 0.00 40.71 3.53
3859 6041 3.474920 AGGTACTCCCTCCATTTGGAAT 58.525 45.455 0.18 0.00 40.71 3.01
3860 6042 3.858638 AGGTACTCCCTCCATTTGGAATT 59.141 43.478 0.18 0.00 40.71 2.17
3861 6043 5.043762 AGGTACTCCCTCCATTTGGAATTA 58.956 41.667 0.18 0.00 40.71 1.40
3862 6044 5.104067 AGGTACTCCCTCCATTTGGAATTAC 60.104 44.000 0.18 0.00 40.71 1.89
3863 6045 5.104067 GGTACTCCCTCCATTTGGAATTACT 60.104 44.000 0.18 0.00 44.91 2.24
3864 6046 5.536497 ACTCCCTCCATTTGGAATTACTT 57.464 39.130 0.18 0.00 44.91 2.24
3865 6047 5.264395 ACTCCCTCCATTTGGAATTACTTG 58.736 41.667 0.18 0.00 44.91 3.16
3866 6048 5.222337 ACTCCCTCCATTTGGAATTACTTGT 60.222 40.000 0.18 0.00 44.91 3.16
3867 6049 5.261216 TCCCTCCATTTGGAATTACTTGTC 58.739 41.667 0.18 0.00 44.91 3.18
3868 6050 5.015178 TCCCTCCATTTGGAATTACTTGTCT 59.985 40.000 0.18 0.00 44.91 3.41
3869 6051 5.716703 CCCTCCATTTGGAATTACTTGTCTT 59.283 40.000 0.18 0.00 44.91 3.01
3870 6052 6.350445 CCCTCCATTTGGAATTACTTGTCTTG 60.350 42.308 0.18 0.00 44.91 3.02
3871 6053 6.434028 CCTCCATTTGGAATTACTTGTCTTGA 59.566 38.462 0.18 0.00 44.91 3.02
3872 6054 7.039784 CCTCCATTTGGAATTACTTGTCTTGAA 60.040 37.037 0.18 0.00 44.91 2.69
3873 6055 8.243961 TCCATTTGGAATTACTTGTCTTGAAA 57.756 30.769 0.00 0.00 42.18 2.69
3874 6056 8.700051 TCCATTTGGAATTACTTGTCTTGAAAA 58.300 29.630 0.00 0.00 42.18 2.29
3875 6057 9.492973 CCATTTGGAATTACTTGTCTTGAAAAT 57.507 29.630 0.00 0.00 37.39 1.82
3919 6101 9.698309 AAATACGTCTAGATACATCCATTTCTG 57.302 33.333 0.00 0.00 0.00 3.02
3920 6102 5.533482 ACGTCTAGATACATCCATTTCTGC 58.467 41.667 0.00 0.00 0.00 4.26
3921 6103 4.618912 CGTCTAGATACATCCATTTCTGCG 59.381 45.833 0.00 0.00 0.00 5.18
3922 6104 5.562890 CGTCTAGATACATCCATTTCTGCGA 60.563 44.000 0.00 0.00 0.00 5.10
3923 6105 5.631512 GTCTAGATACATCCATTTCTGCGAC 59.368 44.000 0.00 0.00 0.00 5.19
3924 6106 4.406648 AGATACATCCATTTCTGCGACA 57.593 40.909 0.00 0.00 0.00 4.35
3925 6107 4.769688 AGATACATCCATTTCTGCGACAA 58.230 39.130 0.00 0.00 0.00 3.18
3926 6108 4.813161 AGATACATCCATTTCTGCGACAAG 59.187 41.667 0.00 0.00 0.00 3.16
3927 6109 2.783135 ACATCCATTTCTGCGACAAGT 58.217 42.857 0.00 0.00 0.00 3.16
3928 6110 3.937814 ACATCCATTTCTGCGACAAGTA 58.062 40.909 0.00 0.00 0.00 2.24
3929 6111 4.323417 ACATCCATTTCTGCGACAAGTAA 58.677 39.130 0.00 0.00 0.00 2.24
3930 6112 4.943705 ACATCCATTTCTGCGACAAGTAAT 59.056 37.500 0.00 0.00 0.00 1.89
3931 6113 5.415701 ACATCCATTTCTGCGACAAGTAATT 59.584 36.000 0.00 0.00 0.00 1.40
3932 6114 5.545658 TCCATTTCTGCGACAAGTAATTC 57.454 39.130 0.00 0.00 0.00 2.17
3933 6115 4.394920 TCCATTTCTGCGACAAGTAATTCC 59.605 41.667 0.00 0.00 0.00 3.01
3934 6116 4.334443 CATTTCTGCGACAAGTAATTCCG 58.666 43.478 0.00 0.00 0.00 4.30
3935 6117 3.306917 TTCTGCGACAAGTAATTCCGA 57.693 42.857 0.00 0.00 0.00 4.55
3936 6118 3.306917 TCTGCGACAAGTAATTCCGAA 57.693 42.857 0.00 0.00 0.00 4.30
3937 6119 2.991190 TCTGCGACAAGTAATTCCGAAC 59.009 45.455 0.00 0.00 0.00 3.95
3938 6120 1.722464 TGCGACAAGTAATTCCGAACG 59.278 47.619 0.00 0.00 0.00 3.95
3939 6121 1.060122 GCGACAAGTAATTCCGAACGG 59.940 52.381 6.94 6.94 0.00 4.44
3940 6122 2.598589 CGACAAGTAATTCCGAACGGA 58.401 47.619 12.04 12.04 43.52 4.69
3941 6123 2.597305 CGACAAGTAATTCCGAACGGAG 59.403 50.000 15.34 5.60 46.06 4.63
3942 6124 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
3943 6125 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
3944 6126 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
3945 6127 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
3946 6128 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
3951 6133 0.104304 CCGAACGGAGGGAGTATTGG 59.896 60.000 7.53 0.00 37.50 3.16
3952 6134 0.529992 CGAACGGAGGGAGTATTGGC 60.530 60.000 0.00 0.00 0.00 4.52
4053 6235 8.352137 TCAATCATGTTTAAGTTGATGGATGT 57.648 30.769 0.00 0.00 30.76 3.06
4054 6236 9.460019 TCAATCATGTTTAAGTTGATGGATGTA 57.540 29.630 0.00 0.00 30.76 2.29
4055 6237 9.726232 CAATCATGTTTAAGTTGATGGATGTAG 57.274 33.333 0.00 0.00 30.76 2.74
4056 6238 7.320443 TCATGTTTAAGTTGATGGATGTAGC 57.680 36.000 0.00 0.00 0.00 3.58
4057 6239 6.318648 TCATGTTTAAGTTGATGGATGTAGCC 59.681 38.462 0.00 0.00 0.00 3.93
4058 6240 5.565509 TGTTTAAGTTGATGGATGTAGCCA 58.434 37.500 0.00 0.00 43.23 4.75
4066 6248 3.862877 ATGGATGTAGCCATGCTAACA 57.137 42.857 0.04 0.00 46.62 2.41
4067 6249 2.917933 TGGATGTAGCCATGCTAACAC 58.082 47.619 0.00 0.00 43.07 3.32
4068 6250 2.238395 TGGATGTAGCCATGCTAACACA 59.762 45.455 0.00 0.00 43.07 3.72
4069 6251 3.117926 TGGATGTAGCCATGCTAACACAT 60.118 43.478 3.34 3.34 43.07 3.21
4070 6252 3.251729 GGATGTAGCCATGCTAACACATG 59.748 47.826 7.49 0.00 43.07 3.21
4080 6262 3.461061 TGCTAACACATGATCTGCTAGC 58.539 45.455 8.10 8.10 34.10 3.42
4081 6263 2.805099 GCTAACACATGATCTGCTAGCC 59.195 50.000 13.29 0.00 30.30 3.93
4082 6264 1.945387 AACACATGATCTGCTAGCCG 58.055 50.000 13.29 5.93 0.00 5.52
4083 6265 0.531532 ACACATGATCTGCTAGCCGC 60.532 55.000 13.29 0.00 39.77 6.53
4084 6266 0.249784 CACATGATCTGCTAGCCGCT 60.250 55.000 13.29 0.00 40.11 5.52
4085 6267 0.467384 ACATGATCTGCTAGCCGCTT 59.533 50.000 13.29 0.00 40.11 4.68
4086 6268 1.146637 CATGATCTGCTAGCCGCTTC 58.853 55.000 13.29 7.07 40.11 3.86
4087 6269 0.755079 ATGATCTGCTAGCCGCTTCA 59.245 50.000 13.29 12.37 40.11 3.02
4088 6270 0.179100 TGATCTGCTAGCCGCTTCAC 60.179 55.000 13.29 0.00 40.11 3.18
4089 6271 0.179100 GATCTGCTAGCCGCTTCACA 60.179 55.000 13.29 0.00 40.11 3.58
4090 6272 0.460987 ATCTGCTAGCCGCTTCACAC 60.461 55.000 13.29 0.00 40.11 3.82
4091 6273 2.432456 TGCTAGCCGCTTCACACG 60.432 61.111 13.29 0.00 40.11 4.49
4092 6274 2.126071 GCTAGCCGCTTCACACGA 60.126 61.111 2.29 0.00 35.14 4.35
4093 6275 2.161486 GCTAGCCGCTTCACACGAG 61.161 63.158 2.29 0.00 35.14 4.18
4094 6276 1.517257 CTAGCCGCTTCACACGAGG 60.517 63.158 0.00 0.00 0.00 4.63
4095 6277 1.934220 CTAGCCGCTTCACACGAGGA 61.934 60.000 0.00 0.00 0.00 3.71
4096 6278 1.529152 TAGCCGCTTCACACGAGGAA 61.529 55.000 0.00 0.00 0.00 3.36
4097 6279 1.959226 GCCGCTTCACACGAGGAAA 60.959 57.895 0.00 0.00 0.00 3.13
4098 6280 1.503818 GCCGCTTCACACGAGGAAAA 61.504 55.000 0.00 0.00 0.00 2.29
4099 6281 0.234884 CCGCTTCACACGAGGAAAAC 59.765 55.000 0.00 0.00 0.00 2.43
4100 6282 1.217882 CGCTTCACACGAGGAAAACT 58.782 50.000 0.00 0.00 0.00 2.66
4101 6283 1.597663 CGCTTCACACGAGGAAAACTT 59.402 47.619 0.00 0.00 0.00 2.66
4102 6284 2.599848 CGCTTCACACGAGGAAAACTTG 60.600 50.000 0.00 0.00 36.60 3.16
4103 6285 2.287009 GCTTCACACGAGGAAAACTTGG 60.287 50.000 0.00 0.00 34.66 3.61
4104 6286 2.992124 TCACACGAGGAAAACTTGGA 57.008 45.000 0.00 0.00 34.66 3.53
4105 6287 2.557317 TCACACGAGGAAAACTTGGAC 58.443 47.619 0.00 0.00 34.66 4.02
4106 6288 2.093394 TCACACGAGGAAAACTTGGACA 60.093 45.455 0.00 0.00 34.66 4.02
4107 6289 2.878406 CACACGAGGAAAACTTGGACAT 59.122 45.455 0.00 0.00 34.66 3.06
4108 6290 2.878406 ACACGAGGAAAACTTGGACATG 59.122 45.455 0.00 0.00 34.66 3.21
4109 6291 1.880027 ACGAGGAAAACTTGGACATGC 59.120 47.619 0.00 0.00 34.66 4.06
4110 6292 1.200020 CGAGGAAAACTTGGACATGCC 59.800 52.381 0.00 0.00 37.10 4.40
4122 6304 3.694926 TGGACATGCCAACATACATTCA 58.305 40.909 6.42 0.00 45.87 2.57
4123 6305 4.085009 TGGACATGCCAACATACATTCAA 58.915 39.130 6.42 0.00 45.87 2.69
4124 6306 4.082300 TGGACATGCCAACATACATTCAAC 60.082 41.667 6.42 0.00 45.87 3.18
4125 6307 4.423732 GACATGCCAACATACATTCAACC 58.576 43.478 0.00 0.00 33.67 3.77
4126 6308 3.195396 ACATGCCAACATACATTCAACCC 59.805 43.478 0.00 0.00 33.67 4.11
4127 6309 3.168035 TGCCAACATACATTCAACCCT 57.832 42.857 0.00 0.00 0.00 4.34
4128 6310 2.824936 TGCCAACATACATTCAACCCTG 59.175 45.455 0.00 0.00 0.00 4.45
4129 6311 3.088532 GCCAACATACATTCAACCCTGA 58.911 45.455 0.00 0.00 0.00 3.86
4130 6312 3.509575 GCCAACATACATTCAACCCTGAA 59.490 43.478 0.00 0.00 45.53 3.02
4131 6313 4.618227 GCCAACATACATTCAACCCTGAAC 60.618 45.833 0.00 0.00 44.28 3.18
4132 6314 4.082245 CCAACATACATTCAACCCTGAACC 60.082 45.833 0.00 0.00 44.28 3.62
4133 6315 4.380843 ACATACATTCAACCCTGAACCA 57.619 40.909 0.00 0.00 44.28 3.67
4134 6316 4.079253 ACATACATTCAACCCTGAACCAC 58.921 43.478 0.00 0.00 44.28 4.16
4135 6317 2.746279 ACATTCAACCCTGAACCACA 57.254 45.000 0.00 0.00 44.28 4.17
4136 6318 3.025322 ACATTCAACCCTGAACCACAA 57.975 42.857 0.00 0.00 44.28 3.33
4137 6319 3.370104 ACATTCAACCCTGAACCACAAA 58.630 40.909 0.00 0.00 44.28 2.83
4138 6320 3.384467 ACATTCAACCCTGAACCACAAAG 59.616 43.478 0.00 0.00 44.28 2.77
4139 6321 2.065899 TCAACCCTGAACCACAAAGG 57.934 50.000 0.00 0.00 45.67 3.11
4140 6322 0.389025 CAACCCTGAACCACAAAGGC 59.611 55.000 0.00 0.00 43.14 4.35
4141 6323 1.106944 AACCCTGAACCACAAAGGCG 61.107 55.000 0.00 0.00 43.14 5.52
4142 6324 1.228124 CCCTGAACCACAAAGGCGA 60.228 57.895 0.00 0.00 43.14 5.54
4143 6325 1.515521 CCCTGAACCACAAAGGCGAC 61.516 60.000 0.00 0.00 43.14 5.19
4144 6326 1.515521 CCTGAACCACAAAGGCGACC 61.516 60.000 0.00 0.00 43.14 4.79
4145 6327 0.817634 CTGAACCACAAAGGCGACCA 60.818 55.000 0.00 0.00 43.14 4.02
4146 6328 0.394488 TGAACCACAAAGGCGACCAA 60.394 50.000 0.00 0.00 43.14 3.67
4147 6329 0.310854 GAACCACAAAGGCGACCAAG 59.689 55.000 0.00 0.00 43.14 3.61
4148 6330 1.734388 AACCACAAAGGCGACCAAGC 61.734 55.000 0.00 0.00 43.14 4.01
4149 6331 2.192861 CCACAAAGGCGACCAAGCA 61.193 57.895 0.00 0.00 39.27 3.91
4150 6332 1.283793 CACAAAGGCGACCAAGCAG 59.716 57.895 0.00 0.00 39.27 4.24
4151 6333 1.152963 ACAAAGGCGACCAAGCAGT 60.153 52.632 0.00 0.00 39.27 4.40
4152 6334 0.751643 ACAAAGGCGACCAAGCAGTT 60.752 50.000 0.00 0.00 39.27 3.16
4153 6335 0.040067 CAAAGGCGACCAAGCAGTTC 60.040 55.000 0.00 0.00 39.27 3.01
4154 6336 0.465460 AAAGGCGACCAAGCAGTTCA 60.465 50.000 0.00 0.00 39.27 3.18
4155 6337 0.886490 AAGGCGACCAAGCAGTTCAG 60.886 55.000 0.00 0.00 39.27 3.02
4156 6338 1.598130 GGCGACCAAGCAGTTCAGT 60.598 57.895 0.00 0.00 39.27 3.41
4157 6339 1.166531 GGCGACCAAGCAGTTCAGTT 61.167 55.000 0.00 0.00 39.27 3.16
4158 6340 1.508632 GCGACCAAGCAGTTCAGTTA 58.491 50.000 0.00 0.00 37.05 2.24
4159 6341 2.076863 GCGACCAAGCAGTTCAGTTAT 58.923 47.619 0.00 0.00 37.05 1.89
4160 6342 3.259064 GCGACCAAGCAGTTCAGTTATA 58.741 45.455 0.00 0.00 37.05 0.98
4161 6343 3.682858 GCGACCAAGCAGTTCAGTTATAA 59.317 43.478 0.00 0.00 37.05 0.98
4162 6344 4.332819 GCGACCAAGCAGTTCAGTTATAAT 59.667 41.667 0.00 0.00 37.05 1.28
4163 6345 5.727791 GCGACCAAGCAGTTCAGTTATAATG 60.728 44.000 0.00 0.00 37.05 1.90
4164 6346 5.351465 CGACCAAGCAGTTCAGTTATAATGT 59.649 40.000 0.00 0.00 0.00 2.71
4165 6347 6.533723 CGACCAAGCAGTTCAGTTATAATGTA 59.466 38.462 0.00 0.00 0.00 2.29
4166 6348 7.064134 CGACCAAGCAGTTCAGTTATAATGTAA 59.936 37.037 0.00 0.00 0.00 2.41
4167 6349 8.040716 ACCAAGCAGTTCAGTTATAATGTAAC 57.959 34.615 0.00 0.00 0.00 2.50
4168 6350 7.663905 ACCAAGCAGTTCAGTTATAATGTAACA 59.336 33.333 2.87 0.00 0.00 2.41
4169 6351 8.677300 CCAAGCAGTTCAGTTATAATGTAACAT 58.323 33.333 2.87 0.00 0.00 2.71
4194 6376 7.838771 AATTATCTTTTTCTCATGCCAAAGC 57.161 32.000 0.00 0.00 40.48 3.51
4209 6391 5.673337 GCCAAAGCAATGACTATTATCGA 57.327 39.130 0.00 0.00 39.53 3.59
4210 6392 6.060028 GCCAAAGCAATGACTATTATCGAA 57.940 37.500 0.00 0.00 39.53 3.71
4211 6393 6.494842 GCCAAAGCAATGACTATTATCGAAA 58.505 36.000 0.00 0.00 39.53 3.46
4212 6394 6.972328 GCCAAAGCAATGACTATTATCGAAAA 59.028 34.615 0.00 0.00 39.53 2.29
4213 6395 7.487829 GCCAAAGCAATGACTATTATCGAAAAA 59.512 33.333 0.00 0.00 39.53 1.94
4214 6396 9.013490 CCAAAGCAATGACTATTATCGAAAAAG 57.987 33.333 0.00 0.00 0.00 2.27
4215 6397 9.013490 CAAAGCAATGACTATTATCGAAAAAGG 57.987 33.333 0.00 0.00 0.00 3.11
4216 6398 6.729187 AGCAATGACTATTATCGAAAAAGGC 58.271 36.000 0.00 0.00 0.00 4.35
4217 6399 6.543831 AGCAATGACTATTATCGAAAAAGGCT 59.456 34.615 0.00 0.00 0.00 4.58
4218 6400 7.067494 AGCAATGACTATTATCGAAAAAGGCTT 59.933 33.333 0.00 0.00 0.00 4.35
4219 6401 7.702348 GCAATGACTATTATCGAAAAAGGCTTT 59.298 33.333 6.68 6.68 0.00 3.51
4220 6402 9.226345 CAATGACTATTATCGAAAAAGGCTTTC 57.774 33.333 13.76 0.41 0.00 2.62
4232 6414 2.109181 GCTTTCGCCCCGCTCTAT 59.891 61.111 0.00 0.00 0.00 1.98
4233 6415 1.366366 GCTTTCGCCCCGCTCTATA 59.634 57.895 0.00 0.00 0.00 1.31
4234 6416 0.037232 GCTTTCGCCCCGCTCTATAT 60.037 55.000 0.00 0.00 0.00 0.86
4235 6417 1.203994 GCTTTCGCCCCGCTCTATATA 59.796 52.381 0.00 0.00 0.00 0.86
4236 6418 2.159085 GCTTTCGCCCCGCTCTATATAT 60.159 50.000 0.00 0.00 0.00 0.86
4237 6419 3.067742 GCTTTCGCCCCGCTCTATATATA 59.932 47.826 0.00 0.00 0.00 0.86
4238 6420 4.441079 GCTTTCGCCCCGCTCTATATATAA 60.441 45.833 0.00 0.00 0.00 0.98
4239 6421 5.657474 CTTTCGCCCCGCTCTATATATAAA 58.343 41.667 0.00 0.00 0.00 1.40
4240 6422 4.913335 TCGCCCCGCTCTATATATAAAG 57.087 45.455 0.00 0.00 0.00 1.85
4241 6423 3.067742 TCGCCCCGCTCTATATATAAAGC 59.932 47.826 7.86 7.86 0.00 3.51
4242 6424 3.181479 CGCCCCGCTCTATATATAAAGCA 60.181 47.826 16.42 0.00 34.39 3.91
4243 6425 4.679639 CGCCCCGCTCTATATATAAAGCAA 60.680 45.833 16.42 0.00 34.39 3.91
4244 6426 4.571176 GCCCCGCTCTATATATAAAGCAAC 59.429 45.833 16.42 1.24 34.39 4.17
4245 6427 4.804139 CCCCGCTCTATATATAAAGCAACG 59.196 45.833 16.42 4.85 34.39 4.10
4246 6428 5.393787 CCCCGCTCTATATATAAAGCAACGA 60.394 44.000 16.42 0.00 34.39 3.85
4247 6429 6.273825 CCCGCTCTATATATAAAGCAACGAT 58.726 40.000 16.42 0.00 34.39 3.73
4248 6430 6.418226 CCCGCTCTATATATAAAGCAACGATC 59.582 42.308 16.42 0.00 34.39 3.69
4249 6431 6.972901 CCGCTCTATATATAAAGCAACGATCA 59.027 38.462 16.42 0.00 34.39 2.92
4250 6432 7.488150 CCGCTCTATATATAAAGCAACGATCAA 59.512 37.037 16.42 0.00 34.39 2.57
4251 6433 9.025020 CGCTCTATATATAAAGCAACGATCAAT 57.975 33.333 16.42 0.00 34.39 2.57
4257 6439 2.907910 AAGCAACGATCAATCACAGC 57.092 45.000 0.00 0.00 0.00 4.40
4258 6440 1.089920 AGCAACGATCAATCACAGCC 58.910 50.000 0.00 0.00 0.00 4.85
4259 6441 0.099436 GCAACGATCAATCACAGCCC 59.901 55.000 0.00 0.00 0.00 5.19
4260 6442 1.452110 CAACGATCAATCACAGCCCA 58.548 50.000 0.00 0.00 0.00 5.36
4261 6443 1.811965 CAACGATCAATCACAGCCCAA 59.188 47.619 0.00 0.00 0.00 4.12
4262 6444 1.742761 ACGATCAATCACAGCCCAAG 58.257 50.000 0.00 0.00 0.00 3.61
4263 6445 1.003580 ACGATCAATCACAGCCCAAGT 59.996 47.619 0.00 0.00 0.00 3.16
4264 6446 2.236146 ACGATCAATCACAGCCCAAGTA 59.764 45.455 0.00 0.00 0.00 2.24
4265 6447 2.609459 CGATCAATCACAGCCCAAGTAC 59.391 50.000 0.00 0.00 0.00 2.73
4266 6448 3.609853 GATCAATCACAGCCCAAGTACA 58.390 45.455 0.00 0.00 0.00 2.90
4267 6449 3.500448 TCAATCACAGCCCAAGTACAA 57.500 42.857 0.00 0.00 0.00 2.41
4268 6450 3.826524 TCAATCACAGCCCAAGTACAAA 58.173 40.909 0.00 0.00 0.00 2.83
4269 6451 4.406456 TCAATCACAGCCCAAGTACAAAT 58.594 39.130 0.00 0.00 0.00 2.32
4270 6452 4.218200 TCAATCACAGCCCAAGTACAAATG 59.782 41.667 0.00 0.00 0.00 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 0.246635 CCAAGAACAGATCCGTCGGT 59.753 55.000 11.88 0.00 34.07 4.69
11 12 1.275291 TCCACCAAGAACAGATCCGTC 59.725 52.381 0.00 0.00 0.00 4.79
18 19 2.095567 CGAGCAAATCCACCAAGAACAG 60.096 50.000 0.00 0.00 0.00 3.16
23 24 1.672881 GATCCGAGCAAATCCACCAAG 59.327 52.381 0.00 0.00 0.00 3.61
24 25 1.281867 AGATCCGAGCAAATCCACCAA 59.718 47.619 0.00 0.00 0.00 3.67
27 28 1.303309 CCAGATCCGAGCAAATCCAC 58.697 55.000 0.00 0.00 0.00 4.02
39 40 2.015587 AGACGAACTACGACCAGATCC 58.984 52.381 0.00 0.00 45.77 3.36
43 44 4.142752 TGAACATAGACGAACTACGACCAG 60.143 45.833 0.00 0.00 45.77 4.00
61 62 7.015098 AGGATCCAACATAAAAACACATGAACA 59.985 33.333 15.82 0.00 0.00 3.18
86 87 6.510478 CGAAGAAGAGTAGTGTAGATCGGAAG 60.510 46.154 0.00 0.00 0.00 3.46
98 99 1.248785 TGCCGCCGAAGAAGAGTAGT 61.249 55.000 0.00 0.00 0.00 2.73
108 109 1.066430 AGAATAGAAACTGCCGCCGAA 60.066 47.619 0.00 0.00 0.00 4.30
143 144 2.766263 AGTCGTCATGCTAAGATCCCAA 59.234 45.455 0.00 0.00 0.00 4.12
146 147 3.385577 GGAAGTCGTCATGCTAAGATCC 58.614 50.000 0.00 0.00 0.00 3.36
149 150 1.134367 CGGGAAGTCGTCATGCTAAGA 59.866 52.381 0.00 0.00 0.00 2.10
154 155 1.078759 CAGTCGGGAAGTCGTCATGC 61.079 60.000 0.00 0.00 0.00 4.06
160 161 3.376234 TGTATTAGACAGTCGGGAAGTCG 59.624 47.826 0.00 0.00 37.36 4.18
166 167 4.817517 ACTTGTTGTATTAGACAGTCGGG 58.182 43.478 0.00 0.00 39.88 5.14
189 190 4.382320 CGTCGAAGCCGGGGGAAA 62.382 66.667 2.18 0.00 36.24 3.13
196 197 2.202623 CCTTCCTCGTCGAAGCCG 60.203 66.667 0.00 0.00 38.35 5.52
198 199 0.038526 TTGTCCTTCCTCGTCGAAGC 60.039 55.000 0.00 0.00 38.35 3.86
199 200 2.094700 TCATTGTCCTTCCTCGTCGAAG 60.095 50.000 0.00 7.11 39.22 3.79
200 201 1.890489 TCATTGTCCTTCCTCGTCGAA 59.110 47.619 0.00 0.00 0.00 3.71
201 202 1.201647 GTCATTGTCCTTCCTCGTCGA 59.798 52.381 0.00 0.00 0.00 4.20
202 203 1.067846 TGTCATTGTCCTTCCTCGTCG 60.068 52.381 0.00 0.00 0.00 5.12
204 205 1.338200 GCTGTCATTGTCCTTCCTCGT 60.338 52.381 0.00 0.00 0.00 4.18
205 206 1.363744 GCTGTCATTGTCCTTCCTCG 58.636 55.000 0.00 0.00 0.00 4.63
206 207 1.363744 CGCTGTCATTGTCCTTCCTC 58.636 55.000 0.00 0.00 0.00 3.71
207 208 0.036010 CCGCTGTCATTGTCCTTCCT 60.036 55.000 0.00 0.00 0.00 3.36
214 215 3.726517 GTGCGCCGCTGTCATTGT 61.727 61.111 11.67 0.00 0.00 2.71
230 231 2.158608 AGTACTGAAGCAAGCCAAAGGT 60.159 45.455 0.00 0.00 0.00 3.50
231 232 2.508526 AGTACTGAAGCAAGCCAAAGG 58.491 47.619 0.00 0.00 0.00 3.11
235 236 1.238439 GCAAGTACTGAAGCAAGCCA 58.762 50.000 0.00 0.00 0.00 4.75
237 238 2.608467 CTGCAAGTACTGAAGCAAGC 57.392 50.000 15.85 5.15 36.44 4.01
249 250 0.179029 ACCTAACAACGGCTGCAAGT 60.179 50.000 0.50 0.00 35.30 3.16
250 251 0.238289 CACCTAACAACGGCTGCAAG 59.762 55.000 0.50 0.00 0.00 4.01
254 255 0.034896 AGACCACCTAACAACGGCTG 59.965 55.000 0.00 0.00 0.00 4.85
257 258 2.559668 TCTGTAGACCACCTAACAACGG 59.440 50.000 0.00 0.00 0.00 4.44
261 262 6.428083 TTCAAATCTGTAGACCACCTAACA 57.572 37.500 0.00 0.00 0.00 2.41
263 264 7.016153 ACATTCAAATCTGTAGACCACCTAA 57.984 36.000 0.00 0.00 0.00 2.69
266 267 7.865706 ATTACATTCAAATCTGTAGACCACC 57.134 36.000 0.00 0.00 0.00 4.61
347 350 9.872757 CGCACATACTTTTCTTTAGAAAACTTA 57.127 29.630 12.38 8.17 45.76 2.24
359 362 5.700832 TGAGTCAAATCGCACATACTTTTCT 59.299 36.000 0.00 0.00 0.00 2.52
360 363 5.927030 TGAGTCAAATCGCACATACTTTTC 58.073 37.500 0.00 0.00 0.00 2.29
369 372 2.000447 GTACCCTGAGTCAAATCGCAC 59.000 52.381 0.00 0.00 0.00 5.34
370 373 1.621317 TGTACCCTGAGTCAAATCGCA 59.379 47.619 0.00 0.00 0.00 5.10
372 375 3.679980 CACTTGTACCCTGAGTCAAATCG 59.320 47.826 0.00 0.00 0.00 3.34
374 377 3.181445 TGCACTTGTACCCTGAGTCAAAT 60.181 43.478 0.00 0.00 0.00 2.32
377 380 1.419381 TGCACTTGTACCCTGAGTCA 58.581 50.000 0.00 0.00 0.00 3.41
378 381 2.143925 GTTGCACTTGTACCCTGAGTC 58.856 52.381 0.00 0.00 0.00 3.36
379 382 1.488812 TGTTGCACTTGTACCCTGAGT 59.511 47.619 0.00 0.00 0.00 3.41
380 383 2.254546 TGTTGCACTTGTACCCTGAG 57.745 50.000 0.00 0.00 0.00 3.35
381 384 2.092646 AGTTGTTGCACTTGTACCCTGA 60.093 45.455 0.00 0.00 0.00 3.86
382 385 2.033299 CAGTTGTTGCACTTGTACCCTG 59.967 50.000 0.00 0.00 0.00 4.45
383 386 2.297701 CAGTTGTTGCACTTGTACCCT 58.702 47.619 0.00 0.00 0.00 4.34
384 387 2.021457 ACAGTTGTTGCACTTGTACCC 58.979 47.619 0.00 0.00 0.00 3.69
385 388 2.794631 GCACAGTTGTTGCACTTGTACC 60.795 50.000 0.00 0.00 0.00 3.34
386 389 2.159448 TGCACAGTTGTTGCACTTGTAC 60.159 45.455 0.00 0.00 33.24 2.90
396 402 1.803625 GCACATGCTTGCACAGTTGTT 60.804 47.619 3.55 0.00 42.49 2.83
419 425 0.950555 GTGTCGTCTGCCAATCAGCA 60.951 55.000 0.00 0.00 42.56 4.41
425 431 2.050836 ATGGTGGTGTCGTCTGCCAA 62.051 55.000 0.00 0.00 33.66 4.52
457 463 2.943690 TGTTACTGCACACGCCTAAAAA 59.056 40.909 0.00 0.00 37.32 1.94
458 464 2.546368 CTGTTACTGCACACGCCTAAAA 59.454 45.455 0.00 0.00 37.32 1.52
459 465 2.139917 CTGTTACTGCACACGCCTAAA 58.860 47.619 0.00 0.00 37.32 1.85
460 466 1.341852 TCTGTTACTGCACACGCCTAA 59.658 47.619 0.00 0.00 37.32 2.69
461 467 0.963225 TCTGTTACTGCACACGCCTA 59.037 50.000 0.00 0.00 37.32 3.93
462 468 0.105964 TTCTGTTACTGCACACGCCT 59.894 50.000 0.00 0.00 37.32 5.52
463 469 0.941542 TTTCTGTTACTGCACACGCC 59.058 50.000 0.00 0.00 37.32 5.68
464 470 2.223157 TGTTTTCTGTTACTGCACACGC 60.223 45.455 0.00 0.00 39.24 5.34
465 471 3.308595 TCTGTTTTCTGTTACTGCACACG 59.691 43.478 0.00 0.00 0.00 4.49
479 487 4.733850 CGGGCCTAGATTTTTCTGTTTTC 58.266 43.478 0.84 0.00 0.00 2.29
527 538 2.223618 GCCCAACTGCTTCGTTGTTTTA 60.224 45.455 11.29 0.00 42.00 1.52
537 548 2.999063 GGCATGGCCCAACTGCTT 60.999 61.111 8.35 0.00 44.06 3.91
620 631 2.422093 GGTTCTGGAGGATGGGTGATTC 60.422 54.545 0.00 0.00 0.00 2.52
758 787 3.122323 TGAATTTCGTCGGGCGGC 61.122 61.111 0.71 0.00 41.72 6.53
769 809 0.037734 GGGAGACGGTGGGTGAATTT 59.962 55.000 0.00 0.00 0.00 1.82
806 847 0.450184 CGGTAAAGAAATGGTGGGCG 59.550 55.000 0.00 0.00 0.00 6.13
807 848 0.172578 GCGGTAAAGAAATGGTGGGC 59.827 55.000 0.00 0.00 0.00 5.36
808 849 1.201414 GTGCGGTAAAGAAATGGTGGG 59.799 52.381 0.00 0.00 0.00 4.61
809 850 1.135803 CGTGCGGTAAAGAAATGGTGG 60.136 52.381 0.00 0.00 0.00 4.61
810 851 1.801771 TCGTGCGGTAAAGAAATGGTG 59.198 47.619 0.00 0.00 0.00 4.17
811 852 1.802365 GTCGTGCGGTAAAGAAATGGT 59.198 47.619 0.00 0.00 0.00 3.55
813 854 3.529634 TTGTCGTGCGGTAAAGAAATG 57.470 42.857 0.00 0.00 0.00 2.32
814 855 3.810941 TCTTTGTCGTGCGGTAAAGAAAT 59.189 39.130 15.79 0.00 36.52 2.17
815 856 3.196463 TCTTTGTCGTGCGGTAAAGAAA 58.804 40.909 15.79 0.00 36.52 2.52
818 859 2.993899 AGATCTTTGTCGTGCGGTAAAG 59.006 45.455 11.97 11.97 0.00 1.85
819 860 3.034721 AGATCTTTGTCGTGCGGTAAA 57.965 42.857 0.00 0.00 0.00 2.01
820 861 2.736144 AGATCTTTGTCGTGCGGTAA 57.264 45.000 0.00 0.00 0.00 2.85
821 862 3.243301 GGATAGATCTTTGTCGTGCGGTA 60.243 47.826 0.00 0.00 0.00 4.02
822 863 2.481449 GGATAGATCTTTGTCGTGCGGT 60.481 50.000 0.00 0.00 0.00 5.68
823 864 2.128035 GGATAGATCTTTGTCGTGCGG 58.872 52.381 0.00 0.00 0.00 5.69
824 865 2.128035 GGGATAGATCTTTGTCGTGCG 58.872 52.381 0.00 0.00 0.00 5.34
825 866 2.128035 CGGGATAGATCTTTGTCGTGC 58.872 52.381 0.00 0.00 0.00 5.34
826 867 2.128035 GCGGGATAGATCTTTGTCGTG 58.872 52.381 0.00 0.00 0.00 4.35
827 868 1.068741 GGCGGGATAGATCTTTGTCGT 59.931 52.381 0.00 0.00 0.00 4.34
828 869 1.784525 GGCGGGATAGATCTTTGTCG 58.215 55.000 0.00 2.23 0.00 4.35
829 870 1.784525 CGGCGGGATAGATCTTTGTC 58.215 55.000 0.00 0.00 0.00 3.18
840 881 3.809374 GAATCGAAGGCGGCGGGAT 62.809 63.158 9.78 4.95 38.28 3.85
841 882 4.524318 GAATCGAAGGCGGCGGGA 62.524 66.667 9.78 2.40 38.28 5.14
860 901 0.898789 AATCGCGGGATATCTCGGGT 60.899 55.000 33.05 21.35 39.71 5.28
861 902 0.179134 GAATCGCGGGATATCTCGGG 60.179 60.000 30.36 30.36 40.02 5.14
864 905 1.404315 GGTGGAATCGCGGGATATCTC 60.404 57.143 16.04 9.56 31.01 2.75
866 907 0.391263 GGGTGGAATCGCGGGATATC 60.391 60.000 16.04 14.05 31.01 1.63
868 909 2.863346 CGGGTGGAATCGCGGGATA 61.863 63.158 16.04 0.00 39.47 2.59
873 914 4.514577 AGCTCGGGTGGAATCGCG 62.515 66.667 0.00 0.00 43.33 5.87
874 915 2.125106 AAGCTCGGGTGGAATCGC 60.125 61.111 0.00 0.00 0.00 4.58
875 916 0.807667 CTGAAGCTCGGGTGGAATCG 60.808 60.000 0.00 0.00 0.00 3.34
876 917 1.092345 GCTGAAGCTCGGGTGGAATC 61.092 60.000 0.00 0.00 38.21 2.52
877 918 1.078143 GCTGAAGCTCGGGTGGAAT 60.078 57.895 0.00 0.00 38.21 3.01
878 919 2.347490 GCTGAAGCTCGGGTGGAA 59.653 61.111 0.00 0.00 38.21 3.53
879 920 4.069232 CGCTGAAGCTCGGGTGGA 62.069 66.667 0.10 0.00 39.32 4.02
885 926 4.441695 TGCTCCCGCTGAAGCTCG 62.442 66.667 0.10 0.00 39.32 5.03
886 927 2.511145 CTGCTCCCGCTGAAGCTC 60.511 66.667 0.10 0.00 39.32 4.09
887 928 2.999648 TCTGCTCCCGCTGAAGCT 61.000 61.111 0.10 0.00 40.53 3.74
888 929 2.511145 CTCTGCTCCCGCTGAAGC 60.511 66.667 0.00 0.00 42.45 3.86
889 930 1.018226 CAACTCTGCTCCCGCTGAAG 61.018 60.000 0.00 0.00 42.45 3.02
952 993 3.077359 CGAATCAAGCCCAAGAAACTCT 58.923 45.455 0.00 0.00 0.00 3.24
961 1010 1.879380 CAAGAACACGAATCAAGCCCA 59.121 47.619 0.00 0.00 0.00 5.36
966 1015 2.293122 CCCAAGCAAGAACACGAATCAA 59.707 45.455 0.00 0.00 0.00 2.57
988 1045 4.181010 CTCCATGACCCCCGCCTG 62.181 72.222 0.00 0.00 0.00 4.85
1018 1075 2.359975 CTCCTTCACAACGCCCCC 60.360 66.667 0.00 0.00 0.00 5.40
1019 1076 2.359975 CCTCCTTCACAACGCCCC 60.360 66.667 0.00 0.00 0.00 5.80
1024 1090 0.980423 AGCTCCTCCTCCTTCACAAC 59.020 55.000 0.00 0.00 0.00 3.32
1331 1420 2.045536 CACAGGAGGCAAGAGGGC 60.046 66.667 0.00 0.00 43.80 5.19
1364 1453 6.533367 CCATGACTAGAAGAAGTTAGCAAGAC 59.467 42.308 0.00 0.00 0.00 3.01
1374 1463 7.201679 CCAAATAAGCACCATGACTAGAAGAAG 60.202 40.741 0.00 0.00 0.00 2.85
1381 1470 4.227300 AGTCCCAAATAAGCACCATGACTA 59.773 41.667 0.00 0.00 0.00 2.59
1394 1483 8.808092 CCTTATTACCAAAACAAGTCCCAAATA 58.192 33.333 0.00 0.00 0.00 1.40
1484 1574 1.689984 TGCAGCCATGACAAGACAAA 58.310 45.000 0.00 0.00 0.00 2.83
1485 1575 1.689984 TTGCAGCCATGACAAGACAA 58.310 45.000 0.00 0.00 0.00 3.18
1490 1580 2.561858 TGCTTAATTGCAGCCATGACAA 59.438 40.909 8.54 0.00 38.12 3.18
1498 1588 2.722629 CACGCATATGCTTAATTGCAGC 59.277 45.455 24.56 4.82 46.71 5.25
1517 1607 5.098218 TGCCGACTTGTTAATACAAACAC 57.902 39.130 0.00 0.00 43.33 3.32
1519 1609 5.933790 TGATGCCGACTTGTTAATACAAAC 58.066 37.500 0.00 0.00 43.33 2.93
1525 1615 8.846943 TGAATATATGATGCCGACTTGTTAAT 57.153 30.769 0.00 0.00 0.00 1.40
1530 1620 9.101655 TGAATATGAATATATGATGCCGACTTG 57.898 33.333 0.00 0.00 30.00 3.16
1548 1638 9.920133 GACTAGCTACAGATGAAATGAATATGA 57.080 33.333 0.00 0.00 0.00 2.15
1549 1639 9.926158 AGACTAGCTACAGATGAAATGAATATG 57.074 33.333 0.00 0.00 0.00 1.78
1551 1641 9.755804 CAAGACTAGCTACAGATGAAATGAATA 57.244 33.333 0.00 0.00 0.00 1.75
1552 1642 7.714377 CCAAGACTAGCTACAGATGAAATGAAT 59.286 37.037 0.00 0.00 0.00 2.57
1553 1643 7.044181 CCAAGACTAGCTACAGATGAAATGAA 58.956 38.462 0.00 0.00 0.00 2.57
1554 1644 6.155221 ACCAAGACTAGCTACAGATGAAATGA 59.845 38.462 0.00 0.00 0.00 2.57
1555 1645 6.344500 ACCAAGACTAGCTACAGATGAAATG 58.656 40.000 0.00 0.00 0.00 2.32
1556 1646 6.552445 ACCAAGACTAGCTACAGATGAAAT 57.448 37.500 0.00 0.00 0.00 2.17
1557 1647 7.476540 TTACCAAGACTAGCTACAGATGAAA 57.523 36.000 0.00 0.00 0.00 2.69
1558 1648 7.476540 TTTACCAAGACTAGCTACAGATGAA 57.523 36.000 0.00 0.00 0.00 2.57
1559 1649 7.468768 CGATTTACCAAGACTAGCTACAGATGA 60.469 40.741 0.00 0.00 0.00 2.92
1560 1650 6.638873 CGATTTACCAAGACTAGCTACAGATG 59.361 42.308 0.00 0.00 0.00 2.90
1661 1751 1.739466 CAACACACACAGAAGCACAGT 59.261 47.619 0.00 0.00 0.00 3.55
1665 1755 3.944650 ACAATACAACACACACAGAAGCA 59.055 39.130 0.00 0.00 0.00 3.91
1856 2055 0.035317 TGAAGCTCGTTGCAGGACAT 59.965 50.000 6.03 0.00 45.94 3.06
1867 2066 1.874019 CACCGTCGGATGAAGCTCG 60.874 63.158 20.51 0.00 0.00 5.03
1878 2077 2.021068 ATCTCCATGCCTCACCGTCG 62.021 60.000 0.00 0.00 0.00 5.12
1944 2145 8.851145 TGTTCCATCTAGTAGCTACAATAAGAG 58.149 37.037 25.28 11.82 0.00 2.85
2306 2527 4.569943 TCTCTTCCTCAAATCCAAACTCG 58.430 43.478 0.00 0.00 0.00 4.18
2490 2711 3.054287 TGTTGGAAGAAGTGTGGGTTACA 60.054 43.478 0.00 0.00 36.82 2.41
2772 2994 5.356751 CCCAGAAATCGTTGTTGATATCCAA 59.643 40.000 0.00 0.00 0.00 3.53
2888 3111 1.556911 CTCAGATACCCCAACTGCTGT 59.443 52.381 0.00 0.00 0.00 4.40
3005 3228 6.315144 TGTCATTGAACACGAAATATACCAGG 59.685 38.462 0.00 0.00 0.00 4.45
3070 3293 7.001922 GTCACTGCGTTAATTAGCATATTACG 58.998 38.462 0.34 0.37 42.95 3.18
3079 3302 5.530519 ACATGTGTCACTGCGTTAATTAG 57.469 39.130 0.00 0.00 0.00 1.73
3119 3351 4.988029 ACCACTACACTAACTCTCAGTCT 58.012 43.478 0.00 0.00 0.00 3.24
3122 3354 4.523173 TCCAACCACTACACTAACTCTCAG 59.477 45.833 0.00 0.00 0.00 3.35
3224 3458 6.929606 ACAAACGAGAAAGCTTCAGTAAGTAT 59.070 34.615 0.00 0.00 34.99 2.12
3225 3459 6.278363 ACAAACGAGAAAGCTTCAGTAAGTA 58.722 36.000 0.00 0.00 34.99 2.24
3481 5534 0.371645 GACGCCTGCATCGAAGAAAG 59.628 55.000 14.25 0.00 43.58 2.62
3534 5588 4.170292 TCAGAGTTGCGAGTTTAGGTAC 57.830 45.455 0.00 0.00 0.00 3.34
3570 5627 0.245539 ACCAACCGAATGTCGACGAT 59.754 50.000 11.62 1.24 43.74 3.73
3587 5644 1.517242 CTGAACACCAGCTCAAGACC 58.483 55.000 0.00 0.00 35.89 3.85
3665 5722 2.094442 GGCTGACTACAGACCAGACTTC 60.094 54.545 0.00 0.00 45.71 3.01
3710 5767 0.323178 ACAGCAGCAGGAGAAATGGG 60.323 55.000 0.00 0.00 0.00 4.00
3845 6027 5.264395 AGACAAGTAATTCCAAATGGAGGG 58.736 41.667 1.86 0.00 46.36 4.30
3846 6028 6.434028 TCAAGACAAGTAATTCCAAATGGAGG 59.566 38.462 1.86 0.00 46.36 4.30
3847 6029 7.452880 TCAAGACAAGTAATTCCAAATGGAG 57.547 36.000 1.86 0.00 46.36 3.86
3848 6030 7.831691 TTCAAGACAAGTAATTCCAAATGGA 57.168 32.000 0.00 0.00 43.73 3.41
3849 6031 8.885494 TTTTCAAGACAAGTAATTCCAAATGG 57.115 30.769 0.00 0.00 0.00 3.16
3893 6075 9.698309 CAGAAATGGATGTATCTAGACGTATTT 57.302 33.333 0.00 0.00 0.00 1.40
3894 6076 7.815068 GCAGAAATGGATGTATCTAGACGTATT 59.185 37.037 0.00 0.00 0.00 1.89
3895 6077 7.316640 GCAGAAATGGATGTATCTAGACGTAT 58.683 38.462 0.00 0.00 0.00 3.06
3896 6078 6.567891 CGCAGAAATGGATGTATCTAGACGTA 60.568 42.308 0.00 0.00 0.00 3.57
3897 6079 5.533482 GCAGAAATGGATGTATCTAGACGT 58.467 41.667 0.00 0.00 0.00 4.34
3898 6080 4.618912 CGCAGAAATGGATGTATCTAGACG 59.381 45.833 0.00 0.00 0.00 4.18
3899 6081 5.631512 GTCGCAGAAATGGATGTATCTAGAC 59.368 44.000 0.00 0.00 39.69 2.59
3900 6082 5.301805 TGTCGCAGAAATGGATGTATCTAGA 59.698 40.000 0.00 0.00 39.69 2.43
3901 6083 5.532557 TGTCGCAGAAATGGATGTATCTAG 58.467 41.667 0.00 0.00 39.69 2.43
3902 6084 5.529581 TGTCGCAGAAATGGATGTATCTA 57.470 39.130 0.00 0.00 39.69 1.98
3903 6085 4.406648 TGTCGCAGAAATGGATGTATCT 57.593 40.909 0.00 0.00 39.69 1.98
3904 6086 4.572389 ACTTGTCGCAGAAATGGATGTATC 59.428 41.667 0.00 0.00 39.69 2.24
3905 6087 4.517285 ACTTGTCGCAGAAATGGATGTAT 58.483 39.130 0.00 0.00 39.69 2.29
3906 6088 3.937814 ACTTGTCGCAGAAATGGATGTA 58.062 40.909 0.00 0.00 39.69 2.29
3907 6089 2.783135 ACTTGTCGCAGAAATGGATGT 58.217 42.857 0.00 0.00 39.69 3.06
3908 6090 4.944962 TTACTTGTCGCAGAAATGGATG 57.055 40.909 0.00 0.00 39.69 3.51
3909 6091 5.066505 GGAATTACTTGTCGCAGAAATGGAT 59.933 40.000 0.00 0.00 39.69 3.41
3910 6092 4.394920 GGAATTACTTGTCGCAGAAATGGA 59.605 41.667 0.00 0.00 39.69 3.41
3911 6093 4.662145 GGAATTACTTGTCGCAGAAATGG 58.338 43.478 0.00 0.00 39.69 3.16
3912 6094 4.092821 TCGGAATTACTTGTCGCAGAAATG 59.907 41.667 0.00 0.00 39.69 2.32
3913 6095 4.250464 TCGGAATTACTTGTCGCAGAAAT 58.750 39.130 0.00 0.00 39.69 2.17
3914 6096 3.655486 TCGGAATTACTTGTCGCAGAAA 58.345 40.909 0.00 0.00 39.69 2.52
3915 6097 3.306917 TCGGAATTACTTGTCGCAGAA 57.693 42.857 0.00 0.00 39.69 3.02
3916 6098 2.991190 GTTCGGAATTACTTGTCGCAGA 59.009 45.455 0.00 0.00 0.00 4.26
3917 6099 2.222508 CGTTCGGAATTACTTGTCGCAG 60.223 50.000 0.00 0.00 0.00 5.18
3918 6100 1.722464 CGTTCGGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 0.00 5.10
3919 6101 1.060122 CCGTTCGGAATTACTTGTCGC 59.940 52.381 5.19 0.00 0.00 5.19
3920 6102 2.597305 CTCCGTTCGGAATTACTTGTCG 59.403 50.000 14.79 0.00 33.41 4.35
3921 6103 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
3922 6104 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
3923 6105 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
3924 6106 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
3925 6107 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
3926 6108 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
3927 6109 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
3928 6110 1.856629 TACTCCCTCCGTTCGGAATT 58.143 50.000 14.79 0.00 33.41 2.17
3929 6111 2.083628 ATACTCCCTCCGTTCGGAAT 57.916 50.000 14.79 2.14 33.41 3.01
3930 6112 1.479323 CAATACTCCCTCCGTTCGGAA 59.521 52.381 14.79 0.00 33.41 4.30
3931 6113 1.108776 CAATACTCCCTCCGTTCGGA 58.891 55.000 13.34 13.34 0.00 4.55
3932 6114 0.104304 CCAATACTCCCTCCGTTCGG 59.896 60.000 4.74 4.74 0.00 4.30
3933 6115 0.529992 GCCAATACTCCCTCCGTTCG 60.530 60.000 0.00 0.00 0.00 3.95
3934 6116 0.831307 AGCCAATACTCCCTCCGTTC 59.169 55.000 0.00 0.00 0.00 3.95
3935 6117 2.040178 CTAGCCAATACTCCCTCCGTT 58.960 52.381 0.00 0.00 0.00 4.44
3936 6118 1.063114 ACTAGCCAATACTCCCTCCGT 60.063 52.381 0.00 0.00 0.00 4.69
3937 6119 1.341531 CACTAGCCAATACTCCCTCCG 59.658 57.143 0.00 0.00 0.00 4.63
3938 6120 2.399580 ACACTAGCCAATACTCCCTCC 58.600 52.381 0.00 0.00 0.00 4.30
3939 6121 3.707102 AGAACACTAGCCAATACTCCCTC 59.293 47.826 0.00 0.00 0.00 4.30
3940 6122 3.725634 AGAACACTAGCCAATACTCCCT 58.274 45.455 0.00 0.00 0.00 4.20
3941 6123 4.489306 AAGAACACTAGCCAATACTCCC 57.511 45.455 0.00 0.00 0.00 4.30
3942 6124 9.780186 AATAATAAGAACACTAGCCAATACTCC 57.220 33.333 0.00 0.00 0.00 3.85
3951 6133 8.630278 TCGAGTTCAATAATAAGAACACTAGC 57.370 34.615 7.88 0.00 44.94 3.42
4041 6223 2.174210 AGCATGGCTACATCCATCAACT 59.826 45.455 0.00 0.00 44.63 3.16
4042 6224 2.579873 AGCATGGCTACATCCATCAAC 58.420 47.619 0.00 0.00 44.63 3.18
4044 6226 3.136260 TGTTAGCATGGCTACATCCATCA 59.864 43.478 0.00 0.00 44.63 3.07
4045 6227 3.499918 GTGTTAGCATGGCTACATCCATC 59.500 47.826 0.00 0.00 44.63 3.51
4047 6229 2.238395 TGTGTTAGCATGGCTACATCCA 59.762 45.455 0.00 0.00 41.12 3.41
4048 6230 2.917933 TGTGTTAGCATGGCTACATCC 58.082 47.619 0.00 0.00 41.12 3.51
4049 6231 4.129380 TCATGTGTTAGCATGGCTACATC 58.871 43.478 0.00 0.00 44.54 3.06
4050 6232 4.155063 TCATGTGTTAGCATGGCTACAT 57.845 40.909 0.00 0.00 44.54 2.29
4051 6233 3.625649 TCATGTGTTAGCATGGCTACA 57.374 42.857 0.00 0.00 44.54 2.74
4052 6234 4.212847 CAGATCATGTGTTAGCATGGCTAC 59.787 45.833 0.00 0.00 44.54 3.58
4053 6235 4.383173 CAGATCATGTGTTAGCATGGCTA 58.617 43.478 6.26 0.00 44.54 3.93
4054 6236 3.211865 CAGATCATGTGTTAGCATGGCT 58.788 45.455 6.26 0.00 44.54 4.75
4055 6237 2.287427 GCAGATCATGTGTTAGCATGGC 60.287 50.000 6.26 0.00 44.54 4.40
4056 6238 3.211865 AGCAGATCATGTGTTAGCATGG 58.788 45.455 6.26 0.00 44.54 3.66
4057 6239 5.593183 CTAGCAGATCATGTGTTAGCATG 57.407 43.478 0.00 0.00 45.48 4.06
4061 6243 3.055591 CGGCTAGCAGATCATGTGTTAG 58.944 50.000 18.24 1.62 33.23 2.34
4062 6244 3.097877 CGGCTAGCAGATCATGTGTTA 57.902 47.619 18.24 0.00 0.00 2.41
4063 6245 1.945387 CGGCTAGCAGATCATGTGTT 58.055 50.000 18.24 0.00 0.00 3.32
4064 6246 3.675086 CGGCTAGCAGATCATGTGT 57.325 52.632 18.24 0.00 0.00 3.72
4076 6258 1.517257 CCTCGTGTGAAGCGGCTAG 60.517 63.158 1.35 0.00 0.00 3.42
4077 6259 1.529152 TTCCTCGTGTGAAGCGGCTA 61.529 55.000 1.35 0.00 0.00 3.93
4078 6260 2.377628 TTTCCTCGTGTGAAGCGGCT 62.378 55.000 0.00 0.00 0.00 5.52
4079 6261 1.503818 TTTTCCTCGTGTGAAGCGGC 61.504 55.000 0.00 0.00 0.00 6.53
4080 6262 0.234884 GTTTTCCTCGTGTGAAGCGG 59.765 55.000 0.00 0.00 0.00 5.52
4081 6263 1.217882 AGTTTTCCTCGTGTGAAGCG 58.782 50.000 0.00 0.00 0.00 4.68
4082 6264 2.287009 CCAAGTTTTCCTCGTGTGAAGC 60.287 50.000 0.00 0.00 0.00 3.86
4083 6265 3.002348 GTCCAAGTTTTCCTCGTGTGAAG 59.998 47.826 0.00 0.00 0.00 3.02
4084 6266 2.940410 GTCCAAGTTTTCCTCGTGTGAA 59.060 45.455 0.00 0.00 0.00 3.18
4085 6267 2.093394 TGTCCAAGTTTTCCTCGTGTGA 60.093 45.455 0.00 0.00 0.00 3.58
4086 6268 2.285083 TGTCCAAGTTTTCCTCGTGTG 58.715 47.619 0.00 0.00 0.00 3.82
4087 6269 2.702592 TGTCCAAGTTTTCCTCGTGT 57.297 45.000 0.00 0.00 0.00 4.49
4088 6270 2.350772 GCATGTCCAAGTTTTCCTCGTG 60.351 50.000 0.00 0.00 0.00 4.35
4089 6271 1.880027 GCATGTCCAAGTTTTCCTCGT 59.120 47.619 0.00 0.00 0.00 4.18
4090 6272 1.200020 GGCATGTCCAAGTTTTCCTCG 59.800 52.381 0.00 0.00 34.01 4.63
4091 6273 2.238521 TGGCATGTCCAAGTTTTCCTC 58.761 47.619 6.42 0.00 43.21 3.71
4092 6274 2.380064 TGGCATGTCCAAGTTTTCCT 57.620 45.000 6.42 0.00 43.21 3.36
4101 6283 3.694926 TGAATGTATGTTGGCATGTCCA 58.305 40.909 4.93 4.93 44.85 4.02
4102 6284 4.423732 GTTGAATGTATGTTGGCATGTCC 58.576 43.478 0.00 0.00 36.58 4.02
4103 6285 4.423732 GGTTGAATGTATGTTGGCATGTC 58.576 43.478 0.00 0.00 36.58 3.06
4104 6286 3.195396 GGGTTGAATGTATGTTGGCATGT 59.805 43.478 0.00 0.00 36.58 3.21
4105 6287 3.448301 AGGGTTGAATGTATGTTGGCATG 59.552 43.478 0.00 0.00 36.58 4.06
4106 6288 3.448301 CAGGGTTGAATGTATGTTGGCAT 59.552 43.478 0.00 0.00 39.03 4.40
4107 6289 2.824936 CAGGGTTGAATGTATGTTGGCA 59.175 45.455 0.00 0.00 0.00 4.92
4108 6290 3.088532 TCAGGGTTGAATGTATGTTGGC 58.911 45.455 0.00 0.00 0.00 4.52
4109 6291 4.082245 GGTTCAGGGTTGAATGTATGTTGG 60.082 45.833 0.00 0.00 44.62 3.77
4110 6292 4.522405 TGGTTCAGGGTTGAATGTATGTTG 59.478 41.667 0.00 0.00 44.62 3.33
4111 6293 4.522789 GTGGTTCAGGGTTGAATGTATGTT 59.477 41.667 0.00 0.00 44.62 2.71
4112 6294 4.079253 GTGGTTCAGGGTTGAATGTATGT 58.921 43.478 0.00 0.00 44.62 2.29
4113 6295 4.078537 TGTGGTTCAGGGTTGAATGTATG 58.921 43.478 0.00 0.00 44.62 2.39
4114 6296 4.380843 TGTGGTTCAGGGTTGAATGTAT 57.619 40.909 0.00 0.00 44.62 2.29
4115 6297 3.866703 TGTGGTTCAGGGTTGAATGTA 57.133 42.857 0.00 0.00 44.62 2.29
4116 6298 2.746279 TGTGGTTCAGGGTTGAATGT 57.254 45.000 0.00 0.00 44.62 2.71
4117 6299 3.243839 CCTTTGTGGTTCAGGGTTGAATG 60.244 47.826 0.00 0.00 44.62 2.67
4118 6300 2.965147 CCTTTGTGGTTCAGGGTTGAAT 59.035 45.455 0.00 0.00 44.62 2.57
4119 6301 2.383855 CCTTTGTGGTTCAGGGTTGAA 58.616 47.619 0.00 0.00 40.92 2.69
4120 6302 2.026905 GCCTTTGTGGTTCAGGGTTGA 61.027 52.381 0.00 0.00 38.35 3.18
4121 6303 0.389025 GCCTTTGTGGTTCAGGGTTG 59.611 55.000 0.00 0.00 38.35 3.77
4122 6304 1.106944 CGCCTTTGTGGTTCAGGGTT 61.107 55.000 0.00 0.00 38.35 4.11
4123 6305 1.528309 CGCCTTTGTGGTTCAGGGT 60.528 57.895 0.00 0.00 38.35 4.34
4124 6306 1.228124 TCGCCTTTGTGGTTCAGGG 60.228 57.895 0.00 0.00 38.35 4.45
4125 6307 1.515521 GGTCGCCTTTGTGGTTCAGG 61.516 60.000 0.00 0.00 38.35 3.86
4126 6308 0.817634 TGGTCGCCTTTGTGGTTCAG 60.818 55.000 0.00 0.00 38.35 3.02
4127 6309 0.394488 TTGGTCGCCTTTGTGGTTCA 60.394 50.000 0.00 0.00 38.35 3.18
4128 6310 0.310854 CTTGGTCGCCTTTGTGGTTC 59.689 55.000 0.00 0.00 38.35 3.62
4129 6311 1.734388 GCTTGGTCGCCTTTGTGGTT 61.734 55.000 0.00 0.00 38.35 3.67
4130 6312 2.193536 GCTTGGTCGCCTTTGTGGT 61.194 57.895 0.00 0.00 38.35 4.16
4131 6313 2.133742 CTGCTTGGTCGCCTTTGTGG 62.134 60.000 0.00 0.00 39.35 4.17
4132 6314 1.283793 CTGCTTGGTCGCCTTTGTG 59.716 57.895 0.00 0.00 0.00 3.33
4133 6315 0.751643 AACTGCTTGGTCGCCTTTGT 60.752 50.000 0.00 0.00 0.00 2.83
4134 6316 0.040067 GAACTGCTTGGTCGCCTTTG 60.040 55.000 0.00 0.00 0.00 2.77
4135 6317 0.465460 TGAACTGCTTGGTCGCCTTT 60.465 50.000 0.00 0.00 34.43 3.11
4136 6318 0.886490 CTGAACTGCTTGGTCGCCTT 60.886 55.000 0.00 0.00 34.43 4.35
4137 6319 1.302033 CTGAACTGCTTGGTCGCCT 60.302 57.895 0.00 0.00 34.43 5.52
4138 6320 1.166531 AACTGAACTGCTTGGTCGCC 61.167 55.000 0.00 0.00 34.43 5.54
4139 6321 1.508632 TAACTGAACTGCTTGGTCGC 58.491 50.000 0.00 0.00 34.43 5.19
4140 6322 5.351465 ACATTATAACTGAACTGCTTGGTCG 59.649 40.000 0.00 0.00 34.43 4.79
4141 6323 6.743575 ACATTATAACTGAACTGCTTGGTC 57.256 37.500 0.00 0.00 0.00 4.02
4142 6324 7.663905 TGTTACATTATAACTGAACTGCTTGGT 59.336 33.333 0.00 0.00 0.00 3.67
4143 6325 8.039603 TGTTACATTATAACTGAACTGCTTGG 57.960 34.615 0.00 0.00 0.00 3.61
4168 6350 9.538508 GCTTTGGCATGAGAAAAAGATAATTAT 57.461 29.630 0.00 0.00 38.54 1.28
4169 6351 8.530311 TGCTTTGGCATGAGAAAAAGATAATTA 58.470 29.630 0.00 0.00 44.28 1.40
4170 6352 7.388437 TGCTTTGGCATGAGAAAAAGATAATT 58.612 30.769 0.00 0.00 44.28 1.40
4171 6353 6.938507 TGCTTTGGCATGAGAAAAAGATAAT 58.061 32.000 0.00 0.00 44.28 1.28
4172 6354 6.343716 TGCTTTGGCATGAGAAAAAGATAA 57.656 33.333 0.00 0.00 44.28 1.75
4173 6355 5.981088 TGCTTTGGCATGAGAAAAAGATA 57.019 34.783 0.00 0.00 44.28 1.98
4174 6356 4.877378 TGCTTTGGCATGAGAAAAAGAT 57.123 36.364 0.00 0.00 44.28 2.40
4187 6369 5.673337 TCGATAATAGTCATTGCTTTGGC 57.327 39.130 0.00 0.00 39.26 4.52
4188 6370 8.909708 TTTTTCGATAATAGTCATTGCTTTGG 57.090 30.769 0.00 0.00 0.00 3.28
4189 6371 9.013490 CCTTTTTCGATAATAGTCATTGCTTTG 57.987 33.333 0.00 0.00 0.00 2.77
4190 6372 7.702348 GCCTTTTTCGATAATAGTCATTGCTTT 59.298 33.333 0.00 0.00 0.00 3.51
4191 6373 7.067494 AGCCTTTTTCGATAATAGTCATTGCTT 59.933 33.333 0.00 0.00 0.00 3.91
4192 6374 6.543831 AGCCTTTTTCGATAATAGTCATTGCT 59.456 34.615 0.00 0.00 0.00 3.91
4193 6375 6.729187 AGCCTTTTTCGATAATAGTCATTGC 58.271 36.000 0.00 0.00 0.00 3.56
4194 6376 9.226345 GAAAGCCTTTTTCGATAATAGTCATTG 57.774 33.333 0.00 0.00 0.00 2.82
4216 6398 3.802948 ATATATAGAGCGGGGCGAAAG 57.197 47.619 0.00 0.00 0.00 2.62
4217 6399 5.657474 CTTTATATATAGAGCGGGGCGAAA 58.343 41.667 0.00 0.00 0.00 3.46
4218 6400 4.441079 GCTTTATATATAGAGCGGGGCGAA 60.441 45.833 16.89 0.00 31.99 4.70
4219 6401 3.067742 GCTTTATATATAGAGCGGGGCGA 59.932 47.826 16.89 0.00 31.99 5.54
4220 6402 3.181479 TGCTTTATATATAGAGCGGGGCG 60.181 47.826 23.15 0.00 41.78 6.13
4221 6403 4.402056 TGCTTTATATATAGAGCGGGGC 57.598 45.455 23.15 7.38 41.78 5.80
4222 6404 4.804139 CGTTGCTTTATATATAGAGCGGGG 59.196 45.833 23.15 14.09 41.78 5.73
4223 6405 5.647589 TCGTTGCTTTATATATAGAGCGGG 58.352 41.667 23.15 16.73 41.78 6.13
4224 6406 6.972901 TGATCGTTGCTTTATATATAGAGCGG 59.027 38.462 23.15 16.98 41.78 5.52
4225 6407 7.971004 TGATCGTTGCTTTATATATAGAGCG 57.029 36.000 23.15 13.46 41.78 5.03
4231 6413 8.446273 GCTGTGATTGATCGTTGCTTTATATAT 58.554 33.333 0.00 0.00 0.00 0.86
4232 6414 7.095229 GGCTGTGATTGATCGTTGCTTTATATA 60.095 37.037 0.00 0.00 0.00 0.86
4233 6415 6.293626 GGCTGTGATTGATCGTTGCTTTATAT 60.294 38.462 0.00 0.00 0.00 0.86
4234 6416 5.007626 GGCTGTGATTGATCGTTGCTTTATA 59.992 40.000 0.00 0.00 0.00 0.98
4235 6417 4.201950 GGCTGTGATTGATCGTTGCTTTAT 60.202 41.667 0.00 0.00 0.00 1.40
4236 6418 3.126858 GGCTGTGATTGATCGTTGCTTTA 59.873 43.478 0.00 0.00 0.00 1.85
4237 6419 2.095059 GGCTGTGATTGATCGTTGCTTT 60.095 45.455 0.00 0.00 0.00 3.51
4238 6420 1.470098 GGCTGTGATTGATCGTTGCTT 59.530 47.619 0.00 0.00 0.00 3.91
4239 6421 1.089920 GGCTGTGATTGATCGTTGCT 58.910 50.000 0.00 0.00 0.00 3.91
4240 6422 0.099436 GGGCTGTGATTGATCGTTGC 59.901 55.000 0.00 0.00 0.00 4.17
4241 6423 1.452110 TGGGCTGTGATTGATCGTTG 58.548 50.000 0.00 0.00 0.00 4.10
4242 6424 2.086869 CTTGGGCTGTGATTGATCGTT 58.913 47.619 0.00 0.00 0.00 3.85
4243 6425 1.003580 ACTTGGGCTGTGATTGATCGT 59.996 47.619 0.00 0.00 0.00 3.73
4244 6426 1.742761 ACTTGGGCTGTGATTGATCG 58.257 50.000 0.00 0.00 0.00 3.69
4245 6427 3.609853 TGTACTTGGGCTGTGATTGATC 58.390 45.455 0.00 0.00 0.00 2.92
4246 6428 3.719268 TGTACTTGGGCTGTGATTGAT 57.281 42.857 0.00 0.00 0.00 2.57
4247 6429 3.500448 TTGTACTTGGGCTGTGATTGA 57.500 42.857 0.00 0.00 0.00 2.57
4248 6430 4.487948 CATTTGTACTTGGGCTGTGATTG 58.512 43.478 0.00 0.00 0.00 2.67
4249 6431 4.789012 CATTTGTACTTGGGCTGTGATT 57.211 40.909 0.00 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.