Multiple sequence alignment - TraesCS1B01G394600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G394600 chr1B 100.000 2435 0 0 1 2435 626609162 626611596 0.000000e+00 4497.0
1 TraesCS1B01G394600 chr1B 94.737 285 14 1 1152 1435 626649127 626649411 2.220000e-120 442.0
2 TraesCS1B01G394600 chr1B 87.162 296 36 2 2067 2360 264104244 264104539 3.880000e-88 335.0
3 TraesCS1B01G394600 chr1D 83.921 1362 101 47 144 1450 456202147 456203445 0.000000e+00 1194.0
4 TraesCS1B01G394600 chr1D 86.813 637 44 22 831 1440 456251407 456252030 0.000000e+00 675.0
5 TraesCS1B01G394600 chr1D 80.748 722 70 28 351 1010 457022323 457023037 1.300000e-137 499.0
6 TraesCS1B01G394600 chr1D 88.969 417 24 10 1022 1435 457033262 457033659 1.680000e-136 496.0
7 TraesCS1B01G394600 chr1D 87.817 394 30 10 233 613 456223821 456224209 1.720000e-121 446.0
8 TraesCS1B01G394600 chr1D 93.684 285 17 1 1152 1435 457044149 457044433 2.240000e-115 425.0
9 TraesCS1B01G394600 chr1D 91.034 145 12 1 112 256 457022143 457022286 6.870000e-46 195.0
10 TraesCS1B01G394600 chr1D 92.308 65 5 0 2354 2418 401839269 401839205 2.580000e-15 93.5
11 TraesCS1B01G394600 chr1A 86.832 767 52 22 718 1450 549670214 549670965 0.000000e+00 811.0
12 TraesCS1B01G394600 chr1A 93.684 285 17 1 1152 1435 549695451 549695735 2.240000e-115 425.0
13 TraesCS1B01G394600 chr1A 83.141 433 53 9 222 654 549669772 549670184 6.360000e-101 377.0
14 TraesCS1B01G394600 chr6B 92.518 548 22 4 1451 1984 47993021 47993563 0.000000e+00 767.0
15 TraesCS1B01G394600 chr6B 92.336 548 23 6 1451 1984 47994483 47995025 0.000000e+00 761.0
16 TraesCS1B01G394600 chr6B 87.285 291 36 1 2067 2356 219773757 219774047 5.020000e-87 331.0
17 TraesCS1B01G394600 chr6B 80.457 481 51 25 1535 1985 297939388 297938921 6.490000e-86 327.0
18 TraesCS1B01G394600 chr6B 86.851 289 35 3 2075 2360 259833978 259833690 1.090000e-83 320.0
19 TraesCS1B01G394600 chr3B 90.367 436 20 7 1564 1984 25623295 25622867 9.840000e-154 553.0
20 TraesCS1B01G394600 chr2B 83.407 452 34 24 1563 1984 234627972 234627532 4.910000e-102 381.0
21 TraesCS1B01G394600 chr2B 81.002 479 47 24 1535 1984 551169896 551169433 8.340000e-90 340.0
22 TraesCS1B01G394600 chr2B 81.481 432 44 28 1563 1984 234629399 234628994 3.020000e-84 322.0
23 TraesCS1B01G394600 chr2B 79.253 482 55 26 1535 1984 551168420 551167952 6.580000e-76 294.0
24 TraesCS1B01G394600 chrUn 82.301 452 38 25 1563 1984 35554258 35553819 1.070000e-93 353.0
25 TraesCS1B01G394600 chr4B 86.532 297 36 4 2067 2360 127959935 127960230 8.400000e-85 324.0
26 TraesCS1B01G394600 chr4B 86.301 292 36 4 2066 2356 8657665 8657377 5.050000e-82 315.0
27 TraesCS1B01G394600 chr4B 95.238 63 3 0 2354 2416 167590280 167590218 1.540000e-17 100.0
28 TraesCS1B01G394600 chr7B 86.441 295 38 2 2068 2360 212932858 212932564 3.020000e-84 322.0
29 TraesCS1B01G394600 chr7B 83.051 59 10 0 180 238 641070729 641070671 1.000000e-03 54.7
30 TraesCS1B01G394600 chr5B 86.195 297 37 4 2067 2360 447916406 447916701 3.910000e-83 318.0
31 TraesCS1B01G394600 chr5B 92.308 65 5 0 2351 2415 468212433 468212497 2.580000e-15 93.5
32 TraesCS1B01G394600 chr3A 85.906 298 38 4 2066 2360 231079169 231079465 5.050000e-82 315.0
33 TraesCS1B01G394600 chr3A 96.721 61 2 0 2356 2416 69278929 69278989 4.280000e-18 102.0
34 TraesCS1B01G394600 chr2D 86.054 294 37 4 2069 2360 488891673 488891964 1.820000e-81 313.0
35 TraesCS1B01G394600 chr2D 92.424 66 5 0 2354 2419 476203618 476203553 7.170000e-16 95.3
36 TraesCS1B01G394600 chr7A 93.750 64 4 0 2354 2417 80136722 80136785 1.990000e-16 97.1
37 TraesCS1B01G394600 chr3D 92.537 67 4 1 2354 2419 422796758 422796692 7.170000e-16 95.3
38 TraesCS1B01G394600 chr3D 90.000 70 7 0 2351 2420 350121576 350121645 9.270000e-15 91.6
39 TraesCS1B01G394600 chr6A 91.176 68 6 0 2351 2418 211559951 211560018 2.580000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G394600 chr1B 626609162 626611596 2434 False 4497.0 4497 100.0000 1 2435 1 chr1B.!!$F2 2434
1 TraesCS1B01G394600 chr1D 456202147 456203445 1298 False 1194.0 1194 83.9210 144 1450 1 chr1D.!!$F1 1306
2 TraesCS1B01G394600 chr1D 456251407 456252030 623 False 675.0 675 86.8130 831 1440 1 chr1D.!!$F3 609
3 TraesCS1B01G394600 chr1D 457022143 457023037 894 False 347.0 499 85.8910 112 1010 2 chr1D.!!$F6 898
4 TraesCS1B01G394600 chr1A 549669772 549670965 1193 False 594.0 811 84.9865 222 1450 2 chr1A.!!$F2 1228
5 TraesCS1B01G394600 chr6B 47993021 47995025 2004 False 764.0 767 92.4270 1451 1984 2 chr6B.!!$F2 533
6 TraesCS1B01G394600 chr2B 234627532 234629399 1867 True 351.5 381 82.4440 1563 1984 2 chr2B.!!$R1 421
7 TraesCS1B01G394600 chr2B 551167952 551169896 1944 True 317.0 340 80.1275 1535 1984 2 chr2B.!!$R2 449

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
82 83 0.036732 CAGGACACCTAAGCCAAGCA 59.963 55.0 0.0 0.0 29.64 3.91 F
729 791 0.108472 GCACCCCTCTACGTGTAACC 60.108 60.0 0.0 0.0 32.40 2.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1125 1248 0.038892 CGCCATTGTTGCTGCTTCTT 60.039 50.0 0.00 0.0 0.00 2.52 R
2039 3678 0.041400 CGTACACGTGACGTACACCA 60.041 55.0 25.01 0.0 45.73 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.432782 CGGTAGTTCGTAATGTCACTCC 58.567 50.000 0.00 0.00 0.00 3.85
22 23 3.733077 CGGTAGTTCGTAATGTCACTCCC 60.733 52.174 0.00 0.00 0.00 4.30
23 24 3.446516 GGTAGTTCGTAATGTCACTCCCT 59.553 47.826 0.00 0.00 0.00 4.20
24 25 3.870633 AGTTCGTAATGTCACTCCCTC 57.129 47.619 0.00 0.00 0.00 4.30
25 26 3.162666 AGTTCGTAATGTCACTCCCTCA 58.837 45.455 0.00 0.00 0.00 3.86
26 27 3.193691 AGTTCGTAATGTCACTCCCTCAG 59.806 47.826 0.00 0.00 0.00 3.35
27 28 1.476891 TCGTAATGTCACTCCCTCAGC 59.523 52.381 0.00 0.00 0.00 4.26
28 29 1.478510 CGTAATGTCACTCCCTCAGCT 59.521 52.381 0.00 0.00 0.00 4.24
29 30 2.480416 CGTAATGTCACTCCCTCAGCTC 60.480 54.545 0.00 0.00 0.00 4.09
30 31 0.908198 AATGTCACTCCCTCAGCTCC 59.092 55.000 0.00 0.00 0.00 4.70
31 32 0.042431 ATGTCACTCCCTCAGCTCCT 59.958 55.000 0.00 0.00 0.00 3.69
32 33 0.178921 TGTCACTCCCTCAGCTCCTT 60.179 55.000 0.00 0.00 0.00 3.36
33 34 0.980423 GTCACTCCCTCAGCTCCTTT 59.020 55.000 0.00 0.00 0.00 3.11
34 35 1.349357 GTCACTCCCTCAGCTCCTTTT 59.651 52.381 0.00 0.00 0.00 2.27
35 36 2.567615 GTCACTCCCTCAGCTCCTTTTA 59.432 50.000 0.00 0.00 0.00 1.52
36 37 3.198853 GTCACTCCCTCAGCTCCTTTTAT 59.801 47.826 0.00 0.00 0.00 1.40
37 38 3.846588 TCACTCCCTCAGCTCCTTTTATT 59.153 43.478 0.00 0.00 0.00 1.40
38 39 4.289672 TCACTCCCTCAGCTCCTTTTATTT 59.710 41.667 0.00 0.00 0.00 1.40
39 40 5.487488 TCACTCCCTCAGCTCCTTTTATTTA 59.513 40.000 0.00 0.00 0.00 1.40
40 41 5.819901 CACTCCCTCAGCTCCTTTTATTTAG 59.180 44.000 0.00 0.00 0.00 1.85
41 42 4.781934 TCCCTCAGCTCCTTTTATTTAGC 58.218 43.478 0.00 0.00 35.16 3.09
42 43 4.475016 TCCCTCAGCTCCTTTTATTTAGCT 59.525 41.667 0.00 0.00 45.94 3.32
46 47 4.972514 AGCTCCTTTTATTTAGCTGCAC 57.027 40.909 1.02 0.00 43.46 4.57
47 48 3.696548 AGCTCCTTTTATTTAGCTGCACC 59.303 43.478 1.02 0.00 43.46 5.01
48 49 3.443681 GCTCCTTTTATTTAGCTGCACCA 59.556 43.478 1.02 0.00 32.18 4.17
49 50 4.082245 GCTCCTTTTATTTAGCTGCACCAA 60.082 41.667 1.02 0.00 32.18 3.67
50 51 5.385509 TCCTTTTATTTAGCTGCACCAAC 57.614 39.130 1.02 0.00 0.00 3.77
51 52 4.083003 TCCTTTTATTTAGCTGCACCAACG 60.083 41.667 1.02 0.00 0.00 4.10
52 53 4.320935 CCTTTTATTTAGCTGCACCAACGT 60.321 41.667 1.02 0.00 0.00 3.99
53 54 3.822594 TTATTTAGCTGCACCAACGTG 57.177 42.857 1.02 0.00 43.35 4.49
63 64 1.967762 CACCAACGTGCATCACATTC 58.032 50.000 0.00 0.00 33.40 2.67
64 65 1.266446 CACCAACGTGCATCACATTCA 59.734 47.619 0.00 0.00 33.40 2.57
65 66 1.536766 ACCAACGTGCATCACATTCAG 59.463 47.619 0.00 0.00 33.40 3.02
66 67 1.135603 CCAACGTGCATCACATTCAGG 60.136 52.381 0.00 0.00 33.40 3.86
67 68 1.805943 CAACGTGCATCACATTCAGGA 59.194 47.619 0.00 0.00 33.40 3.86
68 69 1.442769 ACGTGCATCACATTCAGGAC 58.557 50.000 0.00 0.00 33.40 3.85
69 70 1.270785 ACGTGCATCACATTCAGGACA 60.271 47.619 0.00 0.00 33.40 4.02
70 71 1.129251 CGTGCATCACATTCAGGACAC 59.871 52.381 0.00 0.00 33.40 3.67
71 72 1.470098 GTGCATCACATTCAGGACACC 59.530 52.381 0.00 0.00 34.08 4.16
72 73 1.352017 TGCATCACATTCAGGACACCT 59.648 47.619 0.00 0.00 0.00 4.00
73 74 2.571202 TGCATCACATTCAGGACACCTA 59.429 45.455 0.00 0.00 29.64 3.08
74 75 3.008923 TGCATCACATTCAGGACACCTAA 59.991 43.478 0.00 0.00 29.64 2.69
75 76 3.624861 GCATCACATTCAGGACACCTAAG 59.375 47.826 0.00 0.00 29.64 2.18
76 77 3.334583 TCACATTCAGGACACCTAAGC 57.665 47.619 0.00 0.00 29.64 3.09
77 78 2.027192 TCACATTCAGGACACCTAAGCC 60.027 50.000 0.00 0.00 29.64 4.35
78 79 1.985159 ACATTCAGGACACCTAAGCCA 59.015 47.619 0.00 0.00 29.64 4.75
79 80 2.375174 ACATTCAGGACACCTAAGCCAA 59.625 45.455 0.00 0.00 29.64 4.52
80 81 2.859165 TTCAGGACACCTAAGCCAAG 57.141 50.000 0.00 0.00 29.64 3.61
81 82 0.324943 TCAGGACACCTAAGCCAAGC 59.675 55.000 0.00 0.00 29.64 4.01
82 83 0.036732 CAGGACACCTAAGCCAAGCA 59.963 55.000 0.00 0.00 29.64 3.91
83 84 0.771127 AGGACACCTAAGCCAAGCAA 59.229 50.000 0.00 0.00 28.47 3.91
84 85 1.355720 AGGACACCTAAGCCAAGCAAT 59.644 47.619 0.00 0.00 28.47 3.56
85 86 2.576191 AGGACACCTAAGCCAAGCAATA 59.424 45.455 0.00 0.00 28.47 1.90
86 87 3.203040 AGGACACCTAAGCCAAGCAATAT 59.797 43.478 0.00 0.00 28.47 1.28
87 88 3.954258 GGACACCTAAGCCAAGCAATATT 59.046 43.478 0.00 0.00 0.00 1.28
88 89 4.036852 GGACACCTAAGCCAAGCAATATTC 59.963 45.833 0.00 0.00 0.00 1.75
89 90 4.860022 ACACCTAAGCCAAGCAATATTCT 58.140 39.130 0.00 0.00 0.00 2.40
90 91 4.884164 ACACCTAAGCCAAGCAATATTCTC 59.116 41.667 0.00 0.00 0.00 2.87
91 92 4.276926 CACCTAAGCCAAGCAATATTCTCC 59.723 45.833 0.00 0.00 0.00 3.71
92 93 3.823304 CCTAAGCCAAGCAATATTCTCCC 59.177 47.826 0.00 0.00 0.00 4.30
93 94 3.386932 AAGCCAAGCAATATTCTCCCA 57.613 42.857 0.00 0.00 0.00 4.37
94 95 3.386932 AGCCAAGCAATATTCTCCCAA 57.613 42.857 0.00 0.00 0.00 4.12
95 96 3.026694 AGCCAAGCAATATTCTCCCAAC 58.973 45.455 0.00 0.00 0.00 3.77
96 97 2.223572 GCCAAGCAATATTCTCCCAACG 60.224 50.000 0.00 0.00 0.00 4.10
97 98 2.223572 CCAAGCAATATTCTCCCAACGC 60.224 50.000 0.00 0.00 0.00 4.84
98 99 2.418368 AGCAATATTCTCCCAACGCA 57.582 45.000 0.00 0.00 0.00 5.24
99 100 2.292267 AGCAATATTCTCCCAACGCAG 58.708 47.619 0.00 0.00 0.00 5.18
101 102 2.032178 GCAATATTCTCCCAACGCAGTC 59.968 50.000 0.00 0.00 45.00 3.51
102 103 2.225068 ATATTCTCCCAACGCAGTCG 57.775 50.000 0.00 0.00 45.00 4.18
137 138 1.787057 CGCGGTACTAGAGAGGCCAG 61.787 65.000 5.01 0.00 0.00 4.85
170 171 7.392494 TGGCTATCTGATTACTAGTATTCCG 57.608 40.000 17.86 13.38 0.00 4.30
219 220 8.982091 TTGATGCTCTTAGTACTCTGTACTAT 57.018 34.615 15.52 4.09 30.99 2.12
239 240 7.591006 ACTATGTTCTGTTGGTATTTACACG 57.409 36.000 0.00 0.00 0.00 4.49
351 352 9.177608 ACTTGAGCTTAACTGCAATCATATTAA 57.822 29.630 0.00 0.00 34.99 1.40
375 384 6.099341 AGCACAAACCTAAAAACAAAGACAG 58.901 36.000 0.00 0.00 0.00 3.51
398 407 9.950496 ACAGTTCTCTCTTATTGTCATATTTGT 57.050 29.630 0.00 0.00 0.00 2.83
552 571 9.462174 TCTAAAACTTTGAAGTATGCACAATTG 57.538 29.630 3.24 3.24 38.57 2.32
581 600 7.284261 TGACCTAAAATCACTCAAAATGTGACA 59.716 33.333 0.00 0.00 45.57 3.58
585 604 7.992180 AAAATCACTCAAAATGTGACAGTTC 57.008 32.000 0.00 0.00 45.57 3.01
615 634 4.586001 GGAAATGATGACCCATGCTTACAT 59.414 41.667 0.00 0.00 36.79 2.29
636 655 0.469917 TAGCCATACTGCCTCAAGCC 59.530 55.000 0.00 0.00 42.71 4.35
662 710 1.210234 ACACTCCATGAATCATCGCCA 59.790 47.619 0.00 0.00 0.00 5.69
729 791 0.108472 GCACCCCTCTACGTGTAACC 60.108 60.000 0.00 0.00 32.40 2.85
825 904 0.260816 ATCAGGCTGGCCATGTTCAT 59.739 50.000 15.73 0.00 38.92 2.57
826 905 0.394762 TCAGGCTGGCCATGTTCATC 60.395 55.000 15.73 0.00 38.92 2.92
827 906 0.681887 CAGGCTGGCCATGTTCATCA 60.682 55.000 5.51 0.00 38.92 3.07
828 907 0.682209 AGGCTGGCCATGTTCATCAC 60.682 55.000 5.51 0.00 38.92 3.06
829 908 0.966875 GGCTGGCCATGTTCATCACA 60.967 55.000 5.51 0.00 40.71 3.58
832 911 2.292569 GCTGGCCATGTTCATCACATAG 59.707 50.000 5.51 0.00 45.06 2.23
833 912 3.548770 CTGGCCATGTTCATCACATAGT 58.451 45.455 5.51 0.00 45.06 2.12
860 949 3.155861 AACACGTCACCCCGGTCA 61.156 61.111 0.00 0.00 0.00 4.02
875 964 1.226888 GTCAGTACCGTCCGATGCC 60.227 63.158 0.00 0.00 0.00 4.40
898 987 2.262303 GCCCCGTCTCGATCGATCT 61.262 63.158 19.78 0.00 0.00 2.75
899 988 0.954449 GCCCCGTCTCGATCGATCTA 60.954 60.000 19.78 11.52 0.00 1.98
900 989 1.080298 CCCCGTCTCGATCGATCTAG 58.920 60.000 19.78 20.32 0.00 2.43
901 990 1.608542 CCCCGTCTCGATCGATCTAGT 60.609 57.143 19.78 0.00 0.00 2.57
903 992 1.461512 CCGTCTCGATCGATCTAGTGG 59.538 57.143 19.78 20.34 0.00 4.00
904 993 2.405172 CGTCTCGATCGATCTAGTGGA 58.595 52.381 19.78 7.59 0.00 4.02
905 994 2.997303 CGTCTCGATCGATCTAGTGGAT 59.003 50.000 19.78 0.00 37.37 3.41
906 995 3.061563 CGTCTCGATCGATCTAGTGGATC 59.938 52.174 19.78 6.42 45.37 3.36
913 1002 2.892373 GATCTAGTGGATCGAGCTCG 57.108 55.000 30.03 30.03 40.99 5.03
943 1036 1.809619 CATGTCGGTAGTGCACCCG 60.810 63.158 23.68 23.68 45.52 5.28
944 1037 3.014085 ATGTCGGTAGTGCACCCGG 62.014 63.158 27.27 16.88 45.52 5.73
962 1055 1.813753 GGCTTGATGCTTCCGCGTA 60.814 57.895 4.92 0.00 42.39 4.42
1015 1117 1.335324 GCTGCATGCGGCCTATAAAAG 60.335 52.381 36.51 14.45 43.89 2.27
1035 1149 1.497278 CGCACCATTCTCCACAACG 59.503 57.895 0.00 0.00 0.00 4.10
1042 1163 0.957395 ATTCTCCACAACGCAGGCAG 60.957 55.000 0.00 0.00 0.00 4.85
1059 1182 2.743928 GCAGCCAACTCCTCACCG 60.744 66.667 0.00 0.00 0.00 4.94
1089 1212 0.875908 GCACAGACACAGCACGAGAA 60.876 55.000 0.00 0.00 0.00 2.87
1111 1234 1.492993 GCTTCACCACTTCCCTCCCT 61.493 60.000 0.00 0.00 0.00 4.20
1112 1235 0.615850 CTTCACCACTTCCCTCCCTC 59.384 60.000 0.00 0.00 0.00 4.30
1113 1236 0.840722 TTCACCACTTCCCTCCCTCC 60.841 60.000 0.00 0.00 0.00 4.30
1114 1237 2.125225 ACCACTTCCCTCCCTCCC 59.875 66.667 0.00 0.00 0.00 4.30
1126 1249 3.089874 CCTCCCATCCGAGCCCAA 61.090 66.667 0.00 0.00 0.00 4.12
1127 1250 2.507944 CTCCCATCCGAGCCCAAG 59.492 66.667 0.00 0.00 0.00 3.61
1131 1254 1.821332 CCATCCGAGCCCAAGAAGC 60.821 63.158 0.00 0.00 0.00 3.86
1187 1311 1.532604 TTCATGGTCGTGGCTCTCGT 61.533 55.000 0.00 0.00 0.00 4.18
1382 1506 2.879462 GCGCTACGTCAACTCCCG 60.879 66.667 0.00 0.00 0.00 5.14
1428 1552 1.900016 CAAGCTGCACCTGCCAAGA 60.900 57.895 1.02 0.00 41.18 3.02
1440 1564 2.093288 CCTGCCAAGATGCTGAACTAGA 60.093 50.000 0.00 0.00 32.50 2.43
1492 1616 4.465446 CGGCCCTCCTCTCCCTCA 62.465 72.222 0.00 0.00 0.00 3.86
1498 1622 1.700368 CTCCTCTCCCTCACCCTCA 59.300 63.158 0.00 0.00 0.00 3.86
1509 1633 1.188219 TCACCCTCAGCTCACTGTCC 61.188 60.000 0.00 0.00 44.77 4.02
1519 1643 3.680786 CACTGTCCCTCGCCGTCA 61.681 66.667 0.00 0.00 0.00 4.35
1598 1723 1.304134 AGGGATTTTTCCGGCGCTT 60.304 52.632 7.64 0.00 0.00 4.68
1615 1740 2.152016 GCTTGTACGCCTTCTCCTTTT 58.848 47.619 0.00 0.00 0.00 2.27
1859 3497 3.259020 ACGCAACGGACACACACG 61.259 61.111 0.00 0.00 0.00 4.49
1984 3623 1.094785 CCACGGCTTATTCCCAACAG 58.905 55.000 0.00 0.00 0.00 3.16
1985 3624 1.094785 CACGGCTTATTCCCAACAGG 58.905 55.000 0.00 0.00 0.00 4.00
1986 3625 0.696501 ACGGCTTATTCCCAACAGGT 59.303 50.000 0.00 0.00 36.75 4.00
1987 3626 1.094785 CGGCTTATTCCCAACAGGTG 58.905 55.000 0.00 0.00 36.75 4.00
1988 3627 0.817654 GGCTTATTCCCAACAGGTGC 59.182 55.000 0.00 0.00 36.75 5.01
1989 3628 0.817654 GCTTATTCCCAACAGGTGCC 59.182 55.000 0.00 0.00 36.75 5.01
1990 3629 1.890573 GCTTATTCCCAACAGGTGCCA 60.891 52.381 0.00 0.00 36.75 4.92
1991 3630 1.818674 CTTATTCCCAACAGGTGCCAC 59.181 52.381 0.00 0.00 36.75 5.01
1992 3631 0.322098 TATTCCCAACAGGTGCCACG 60.322 55.000 0.00 0.00 36.75 4.94
1993 3632 2.063015 ATTCCCAACAGGTGCCACGA 62.063 55.000 0.00 0.00 36.75 4.35
1994 3633 2.669569 CCCAACAGGTGCCACGAG 60.670 66.667 0.00 0.00 0.00 4.18
1995 3634 3.357079 CCAACAGGTGCCACGAGC 61.357 66.667 0.00 0.00 44.14 5.03
1996 3635 2.281070 CAACAGGTGCCACGAGCT 60.281 61.111 0.00 0.00 44.23 4.09
1997 3636 1.893808 CAACAGGTGCCACGAGCTT 60.894 57.895 0.00 0.00 44.23 3.74
1998 3637 1.598130 AACAGGTGCCACGAGCTTC 60.598 57.895 0.00 0.00 44.23 3.86
1999 3638 3.114616 CAGGTGCCACGAGCTTCG 61.115 66.667 0.00 0.00 46.93 3.79
2009 3648 3.248626 CGAGCTTCGTCCATCTCTG 57.751 57.895 0.00 0.00 34.72 3.35
2010 3649 0.453793 CGAGCTTCGTCCATCTCTGT 59.546 55.000 0.00 0.00 34.72 3.41
2011 3650 1.532921 CGAGCTTCGTCCATCTCTGTC 60.533 57.143 0.00 0.00 34.72 3.51
2012 3651 1.748493 GAGCTTCGTCCATCTCTGTCT 59.252 52.381 0.00 0.00 0.00 3.41
2013 3652 1.748493 AGCTTCGTCCATCTCTGTCTC 59.252 52.381 0.00 0.00 0.00 3.36
2014 3653 1.532921 GCTTCGTCCATCTCTGTCTCG 60.533 57.143 0.00 0.00 0.00 4.04
2015 3654 0.452184 TTCGTCCATCTCTGTCTCGC 59.548 55.000 0.00 0.00 0.00 5.03
2016 3655 1.297967 CGTCCATCTCTGTCTCGCG 60.298 63.158 0.00 0.00 0.00 5.87
2017 3656 1.587613 GTCCATCTCTGTCTCGCGC 60.588 63.158 0.00 0.00 0.00 6.86
2018 3657 2.653448 CCATCTCTGTCTCGCGCG 60.653 66.667 26.76 26.76 0.00 6.86
2019 3658 2.101185 CATCTCTGTCTCGCGCGT 59.899 61.111 30.98 3.31 0.00 6.01
2020 3659 2.101185 ATCTCTGTCTCGCGCGTG 59.899 61.111 30.98 27.67 0.00 5.34
2021 3660 2.399356 ATCTCTGTCTCGCGCGTGA 61.399 57.895 30.98 29.65 0.00 4.35
2022 3661 2.585170 ATCTCTGTCTCGCGCGTGAC 62.585 60.000 41.83 41.83 38.61 3.67
2023 3662 3.595108 CTCTGTCTCGCGCGTGACA 62.595 63.158 44.84 44.84 43.47 3.58
2024 3663 2.729491 CTGTCTCGCGCGTGACAA 60.729 61.111 45.63 34.72 44.47 3.18
2025 3664 2.049526 TGTCTCGCGCGTGACAAT 60.050 55.556 45.88 0.00 42.97 2.71
2026 3665 2.271024 CTGTCTCGCGCGTGACAATG 62.271 60.000 45.63 36.82 44.47 2.82
2027 3666 2.049526 TCTCGCGCGTGACAATGT 60.050 55.556 30.98 0.00 0.00 2.71
2028 3667 2.094539 CTCGCGCGTGACAATGTG 59.905 61.111 30.98 3.87 0.00 3.21
2029 3668 3.964729 CTCGCGCGTGACAATGTGC 62.965 63.158 30.98 4.78 43.94 4.57
2031 3670 4.024143 GCGCGTGACAATGTGCCA 62.024 61.111 8.43 0.00 41.99 4.92
2032 3671 2.869646 CGCGTGACAATGTGCCAT 59.130 55.556 0.00 0.00 0.00 4.40
2033 3672 1.512522 CGCGTGACAATGTGCCATG 60.513 57.895 0.00 0.00 0.00 3.66
2034 3673 1.153978 GCGTGACAATGTGCCATGG 60.154 57.895 7.63 7.63 0.00 3.66
2035 3674 1.153978 CGTGACAATGTGCCATGGC 60.154 57.895 30.54 30.54 42.35 4.40
2036 3675 1.216178 GTGACAATGTGCCATGGCC 59.784 57.895 33.44 23.83 41.09 5.36
2037 3676 2.341875 TGACAATGTGCCATGGCCG 61.342 57.895 33.44 18.20 41.09 6.13
2038 3677 2.283101 ACAATGTGCCATGGCCGT 60.283 55.556 33.44 22.01 41.09 5.68
2039 3678 1.876497 GACAATGTGCCATGGCCGTT 61.876 55.000 33.44 25.95 41.09 4.44
2040 3679 1.446445 CAATGTGCCATGGCCGTTG 60.446 57.895 33.44 31.06 41.09 4.10
2041 3680 2.648143 AATGTGCCATGGCCGTTGG 61.648 57.895 33.44 18.09 41.09 3.77
2042 3681 3.884704 ATGTGCCATGGCCGTTGGT 62.885 57.895 33.44 11.00 41.09 3.67
2043 3682 4.054825 GTGCCATGGCCGTTGGTG 62.055 66.667 33.44 5.81 41.09 4.17
2044 3683 4.594854 TGCCATGGCCGTTGGTGT 62.595 61.111 33.44 0.00 41.09 4.16
2045 3684 2.360600 GCCATGGCCGTTGGTGTA 60.361 61.111 27.24 0.00 36.57 2.90
2046 3685 2.696759 GCCATGGCCGTTGGTGTAC 61.697 63.158 27.24 5.51 36.57 2.90
2047 3686 2.395360 CCATGGCCGTTGGTGTACG 61.395 63.158 14.93 0.00 41.06 3.67
2048 3687 1.669760 CATGGCCGTTGGTGTACGT 60.670 57.895 0.00 0.00 39.81 3.57
2049 3688 1.375013 ATGGCCGTTGGTGTACGTC 60.375 57.895 0.00 0.00 39.81 4.34
2050 3689 2.029369 GGCCGTTGGTGTACGTCA 59.971 61.111 0.00 0.00 39.81 4.35
2051 3690 2.312436 GGCCGTTGGTGTACGTCAC 61.312 63.158 0.00 0.00 45.47 3.67
2070 3709 1.274596 CGTGTACGTGAGGTAATGGC 58.725 55.000 0.00 0.00 31.61 4.40
2071 3710 1.648504 GTGTACGTGAGGTAATGGCC 58.351 55.000 0.00 0.00 31.61 5.36
2072 3711 0.538118 TGTACGTGAGGTAATGGCCC 59.462 55.000 0.00 0.00 31.61 5.80
2073 3712 0.529119 GTACGTGAGGTAATGGCCCG 60.529 60.000 0.00 0.00 31.61 6.13
2074 3713 1.678598 TACGTGAGGTAATGGCCCGG 61.679 60.000 0.00 0.00 0.00 5.73
2075 3714 2.995547 GTGAGGTAATGGCCCGGT 59.004 61.111 0.00 0.00 0.00 5.28
2076 3715 1.301954 GTGAGGTAATGGCCCGGTT 59.698 57.895 0.00 0.00 0.00 4.44
2077 3716 0.323087 GTGAGGTAATGGCCCGGTTT 60.323 55.000 0.00 0.00 0.00 3.27
2078 3717 0.322997 TGAGGTAATGGCCCGGTTTG 60.323 55.000 0.00 0.00 0.00 2.93
2079 3718 1.000145 AGGTAATGGCCCGGTTTGG 60.000 57.895 0.00 0.00 37.55 3.28
2080 3719 1.000646 GGTAATGGCCCGGTTTGGA 60.001 57.895 0.00 0.00 42.00 3.53
2081 3720 0.396556 GGTAATGGCCCGGTTTGGAT 60.397 55.000 0.00 0.00 42.00 3.41
2082 3721 1.133730 GGTAATGGCCCGGTTTGGATA 60.134 52.381 0.00 0.00 42.00 2.59
2083 3722 1.951602 GTAATGGCCCGGTTTGGATAC 59.048 52.381 0.00 0.00 42.00 2.24
2084 3723 0.629058 AATGGCCCGGTTTGGATACT 59.371 50.000 0.00 0.00 42.00 2.12
2085 3724 0.182775 ATGGCCCGGTTTGGATACTC 59.817 55.000 0.00 0.00 42.00 2.59
2086 3725 0.912487 TGGCCCGGTTTGGATACTCT 60.912 55.000 0.00 0.00 42.00 3.24
2087 3726 1.125633 GGCCCGGTTTGGATACTCTA 58.874 55.000 0.00 0.00 42.00 2.43
2088 3727 1.487558 GGCCCGGTTTGGATACTCTAA 59.512 52.381 0.00 0.00 42.00 2.10
2089 3728 2.558378 GCCCGGTTTGGATACTCTAAC 58.442 52.381 0.00 0.00 42.00 2.34
2090 3729 2.169978 GCCCGGTTTGGATACTCTAACT 59.830 50.000 0.00 0.00 42.00 2.24
2091 3730 3.793559 CCCGGTTTGGATACTCTAACTG 58.206 50.000 0.00 0.00 42.00 3.16
2092 3731 3.449737 CCCGGTTTGGATACTCTAACTGA 59.550 47.826 0.00 0.00 42.00 3.41
2093 3732 4.441634 CCCGGTTTGGATACTCTAACTGAG 60.442 50.000 0.00 0.00 44.23 3.35
2130 3769 8.020777 AGTTAGATTCTAGCCCTAAACTAACC 57.979 38.462 13.73 3.24 39.11 2.85
2131 3770 7.845289 AGTTAGATTCTAGCCCTAAACTAACCT 59.155 37.037 13.73 4.69 39.11 3.50
2132 3771 8.484575 GTTAGATTCTAGCCCTAAACTAACCTT 58.515 37.037 0.00 0.00 35.16 3.50
2133 3772 6.890293 AGATTCTAGCCCTAAACTAACCTTG 58.110 40.000 0.00 0.00 0.00 3.61
2134 3773 6.672657 AGATTCTAGCCCTAAACTAACCTTGA 59.327 38.462 0.00 0.00 0.00 3.02
2135 3774 6.691255 TTCTAGCCCTAAACTAACCTTGAA 57.309 37.500 0.00 0.00 0.00 2.69
2136 3775 6.046290 TCTAGCCCTAAACTAACCTTGAAC 57.954 41.667 0.00 0.00 0.00 3.18
2137 3776 4.995624 AGCCCTAAACTAACCTTGAACT 57.004 40.909 0.00 0.00 0.00 3.01
2138 3777 6.955851 TCTAGCCCTAAACTAACCTTGAACTA 59.044 38.462 0.00 0.00 0.00 2.24
2139 3778 6.443995 AGCCCTAAACTAACCTTGAACTAA 57.556 37.500 0.00 0.00 0.00 2.24
2140 3779 6.236409 AGCCCTAAACTAACCTTGAACTAAC 58.764 40.000 0.00 0.00 0.00 2.34
2141 3780 6.044054 AGCCCTAAACTAACCTTGAACTAACT 59.956 38.462 0.00 0.00 0.00 2.24
2142 3781 6.713903 GCCCTAAACTAACCTTGAACTAACTT 59.286 38.462 0.00 0.00 0.00 2.66
2143 3782 7.230108 GCCCTAAACTAACCTTGAACTAACTTT 59.770 37.037 0.00 0.00 0.00 2.66
2144 3783 9.783081 CCCTAAACTAACCTTGAACTAACTTTA 57.217 33.333 0.00 0.00 0.00 1.85
2147 3786 7.741027 AACTAACCTTGAACTAACTTTAGCC 57.259 36.000 0.00 0.00 34.09 3.93
2148 3787 5.930569 ACTAACCTTGAACTAACTTTAGCCG 59.069 40.000 0.00 0.00 34.09 5.52
2149 3788 4.612264 ACCTTGAACTAACTTTAGCCGA 57.388 40.909 0.00 0.00 34.09 5.54
2150 3789 5.161943 ACCTTGAACTAACTTTAGCCGAT 57.838 39.130 0.00 0.00 34.09 4.18
2151 3790 4.935808 ACCTTGAACTAACTTTAGCCGATG 59.064 41.667 0.00 0.00 34.09 3.84
2152 3791 5.175859 CCTTGAACTAACTTTAGCCGATGA 58.824 41.667 0.00 0.00 34.09 2.92
2153 3792 5.292101 CCTTGAACTAACTTTAGCCGATGAG 59.708 44.000 0.00 0.00 34.09 2.90
2154 3793 4.755411 TGAACTAACTTTAGCCGATGAGG 58.245 43.478 0.00 0.00 44.97 3.86
2155 3794 4.222145 TGAACTAACTTTAGCCGATGAGGT 59.778 41.667 0.00 0.00 43.70 3.85
2156 3795 4.124851 ACTAACTTTAGCCGATGAGGTG 57.875 45.455 0.00 0.00 43.70 4.00
2157 3796 3.514309 ACTAACTTTAGCCGATGAGGTGT 59.486 43.478 0.00 0.00 43.70 4.16
2158 3797 3.418684 AACTTTAGCCGATGAGGTGTT 57.581 42.857 0.00 0.00 43.70 3.32
2159 3798 3.418684 ACTTTAGCCGATGAGGTGTTT 57.581 42.857 0.00 0.00 43.70 2.83
2160 3799 3.074412 ACTTTAGCCGATGAGGTGTTTG 58.926 45.455 0.00 0.00 43.70 2.93
2161 3800 2.107950 TTAGCCGATGAGGTGTTTGG 57.892 50.000 0.00 0.00 43.70 3.28
2162 3801 1.271856 TAGCCGATGAGGTGTTTGGA 58.728 50.000 0.00 0.00 43.70 3.53
2163 3802 0.620556 AGCCGATGAGGTGTTTGGAT 59.379 50.000 0.00 0.00 43.70 3.41
2164 3803 0.734889 GCCGATGAGGTGTTTGGATG 59.265 55.000 0.00 0.00 43.70 3.51
2165 3804 1.678728 GCCGATGAGGTGTTTGGATGA 60.679 52.381 0.00 0.00 43.70 2.92
2166 3805 2.009774 CCGATGAGGTGTTTGGATGAC 58.990 52.381 0.00 0.00 34.51 3.06
2167 3806 2.615240 CCGATGAGGTGTTTGGATGACA 60.615 50.000 0.00 0.00 34.51 3.58
2168 3807 2.674852 CGATGAGGTGTTTGGATGACAG 59.325 50.000 0.00 0.00 0.00 3.51
2169 3808 3.679389 GATGAGGTGTTTGGATGACAGT 58.321 45.455 0.00 0.00 0.00 3.55
2170 3809 2.849942 TGAGGTGTTTGGATGACAGTG 58.150 47.619 0.00 0.00 0.00 3.66
2171 3810 2.172505 TGAGGTGTTTGGATGACAGTGT 59.827 45.455 0.00 0.00 0.00 3.55
2172 3811 3.214328 GAGGTGTTTGGATGACAGTGTT 58.786 45.455 0.00 0.00 0.00 3.32
2173 3812 4.141597 TGAGGTGTTTGGATGACAGTGTTA 60.142 41.667 0.00 0.00 0.00 2.41
2174 3813 4.389374 AGGTGTTTGGATGACAGTGTTAG 58.611 43.478 0.00 0.00 0.00 2.34
2175 3814 4.102524 AGGTGTTTGGATGACAGTGTTAGA 59.897 41.667 0.00 0.00 0.00 2.10
2176 3815 5.003804 GGTGTTTGGATGACAGTGTTAGAT 58.996 41.667 0.00 0.00 0.00 1.98
2177 3816 5.106555 GGTGTTTGGATGACAGTGTTAGATG 60.107 44.000 0.00 0.00 0.00 2.90
2178 3817 5.003160 TGTTTGGATGACAGTGTTAGATGG 58.997 41.667 0.00 0.00 0.00 3.51
2179 3818 5.221823 TGTTTGGATGACAGTGTTAGATGGA 60.222 40.000 0.00 0.00 0.00 3.41
2180 3819 4.743057 TGGATGACAGTGTTAGATGGAG 57.257 45.455 0.00 0.00 0.00 3.86
2181 3820 3.118629 TGGATGACAGTGTTAGATGGAGC 60.119 47.826 0.00 0.00 0.00 4.70
2182 3821 2.654749 TGACAGTGTTAGATGGAGCG 57.345 50.000 0.00 0.00 0.00 5.03
2183 3822 1.281899 GACAGTGTTAGATGGAGCGC 58.718 55.000 0.00 0.00 0.00 5.92
2184 3823 0.458543 ACAGTGTTAGATGGAGCGCG 60.459 55.000 0.00 0.00 0.00 6.86
2185 3824 1.141881 AGTGTTAGATGGAGCGCGG 59.858 57.895 8.83 0.00 0.00 6.46
2186 3825 1.141019 GTGTTAGATGGAGCGCGGA 59.859 57.895 8.83 0.00 0.00 5.54
2187 3826 0.249489 GTGTTAGATGGAGCGCGGAT 60.249 55.000 8.83 0.00 0.00 4.18
2188 3827 1.000607 GTGTTAGATGGAGCGCGGATA 60.001 52.381 8.83 0.00 0.00 2.59
2189 3828 1.000607 TGTTAGATGGAGCGCGGATAC 60.001 52.381 8.83 0.00 0.00 2.24
2201 3840 3.537874 GGATACGGTGAGGCGCCT 61.538 66.667 33.48 33.48 0.00 5.52
2202 3841 2.499685 GATACGGTGAGGCGCCTT 59.500 61.111 33.34 17.45 0.00 4.35
2203 3842 1.591863 GATACGGTGAGGCGCCTTC 60.592 63.158 33.34 25.24 0.00 3.46
2204 3843 2.292794 GATACGGTGAGGCGCCTTCA 62.293 60.000 33.34 25.57 0.00 3.02
2205 3844 2.573609 ATACGGTGAGGCGCCTTCAC 62.574 60.000 33.13 33.13 0.00 3.18
2223 3862 4.803426 GGGCGGTGCGAGAGTGAG 62.803 72.222 0.00 0.00 0.00 3.51
2224 3863 4.803426 GGCGGTGCGAGAGTGAGG 62.803 72.222 0.00 0.00 0.00 3.86
2225 3864 4.803426 GCGGTGCGAGAGTGAGGG 62.803 72.222 0.00 0.00 0.00 4.30
2226 3865 4.135153 CGGTGCGAGAGTGAGGGG 62.135 72.222 0.00 0.00 0.00 4.79
2227 3866 3.775654 GGTGCGAGAGTGAGGGGG 61.776 72.222 0.00 0.00 0.00 5.40
2242 3881 3.485764 GGGGGAGATGACAAGAAGC 57.514 57.895 0.00 0.00 0.00 3.86
2243 3882 0.915364 GGGGGAGATGACAAGAAGCT 59.085 55.000 0.00 0.00 0.00 3.74
2244 3883 1.283321 GGGGGAGATGACAAGAAGCTT 59.717 52.381 0.00 0.00 0.00 3.74
2245 3884 2.637947 GGGGAGATGACAAGAAGCTTC 58.362 52.381 19.11 19.11 0.00 3.86
2246 3885 2.026822 GGGGAGATGACAAGAAGCTTCA 60.027 50.000 27.57 8.44 0.00 3.02
2247 3886 3.560025 GGGGAGATGACAAGAAGCTTCAA 60.560 47.826 27.57 8.52 0.00 2.69
2248 3887 3.688673 GGGAGATGACAAGAAGCTTCAAG 59.311 47.826 27.57 20.41 0.00 3.02
2249 3888 3.688673 GGAGATGACAAGAAGCTTCAAGG 59.311 47.826 27.57 17.77 0.00 3.61
2250 3889 4.564406 GGAGATGACAAGAAGCTTCAAGGA 60.564 45.833 27.57 10.95 0.00 3.36
2251 3890 4.978099 AGATGACAAGAAGCTTCAAGGAA 58.022 39.130 27.57 10.95 0.00 3.36
2252 3891 5.002516 AGATGACAAGAAGCTTCAAGGAAG 58.997 41.667 27.57 12.49 42.03 3.46
2253 3892 4.156455 TGACAAGAAGCTTCAAGGAAGT 57.844 40.909 27.57 15.31 41.27 3.01
2254 3893 3.879295 TGACAAGAAGCTTCAAGGAAGTG 59.121 43.478 27.57 14.69 41.27 3.16
2255 3894 4.130118 GACAAGAAGCTTCAAGGAAGTGA 58.870 43.478 27.57 0.00 41.27 3.41
2256 3895 4.133078 ACAAGAAGCTTCAAGGAAGTGAG 58.867 43.478 27.57 7.44 41.27 3.51
2257 3896 3.415457 AGAAGCTTCAAGGAAGTGAGG 57.585 47.619 27.57 0.00 41.27 3.86
2258 3897 2.975489 AGAAGCTTCAAGGAAGTGAGGA 59.025 45.455 27.57 0.00 41.27 3.71
2259 3898 3.392616 AGAAGCTTCAAGGAAGTGAGGAA 59.607 43.478 27.57 0.00 41.27 3.36
2260 3899 3.415457 AGCTTCAAGGAAGTGAGGAAG 57.585 47.619 7.71 0.00 41.27 3.46
2261 3900 2.039613 AGCTTCAAGGAAGTGAGGAAGG 59.960 50.000 7.71 0.00 41.27 3.46
2262 3901 2.039084 GCTTCAAGGAAGTGAGGAAGGA 59.961 50.000 7.71 0.00 41.27 3.36
2263 3902 3.308046 GCTTCAAGGAAGTGAGGAAGGAT 60.308 47.826 7.71 0.00 41.27 3.24
2264 3903 4.512484 CTTCAAGGAAGTGAGGAAGGATC 58.488 47.826 0.00 0.00 35.21 3.36
2265 3904 3.796111 TCAAGGAAGTGAGGAAGGATCT 58.204 45.455 0.00 0.00 0.00 2.75
2266 3905 3.772025 TCAAGGAAGTGAGGAAGGATCTC 59.228 47.826 0.00 0.00 0.00 2.75
2267 3906 2.758130 AGGAAGTGAGGAAGGATCTCC 58.242 52.381 0.00 0.00 35.51 3.71
2276 3915 3.962557 AGGATCTCCTGCGGGAAG 58.037 61.111 16.91 10.05 46.55 3.46
2277 3916 1.764054 AGGATCTCCTGCGGGAAGG 60.764 63.158 16.91 4.97 46.55 3.46
2278 3917 2.812619 GGATCTCCTGCGGGAAGGG 61.813 68.421 16.91 4.14 41.69 3.95
2279 3918 3.468326 GATCTCCTGCGGGAAGGGC 62.468 68.421 16.91 1.62 41.69 5.19
2284 3923 4.521062 CTGCGGGAAGGGCGAGAG 62.521 72.222 0.00 0.00 0.00 3.20
2286 3925 3.771160 GCGGGAAGGGCGAGAGAA 61.771 66.667 0.00 0.00 0.00 2.87
2287 3926 2.978824 CGGGAAGGGCGAGAGAAA 59.021 61.111 0.00 0.00 0.00 2.52
2288 3927 1.295423 CGGGAAGGGCGAGAGAAAA 59.705 57.895 0.00 0.00 0.00 2.29
2289 3928 0.321298 CGGGAAGGGCGAGAGAAAAA 60.321 55.000 0.00 0.00 0.00 1.94
2309 3948 4.766404 AAAGTGCTTTTTAGTGATCCCG 57.234 40.909 0.00 0.00 0.00 5.14
2310 3949 3.695830 AGTGCTTTTTAGTGATCCCGA 57.304 42.857 0.00 0.00 0.00 5.14
2311 3950 3.600388 AGTGCTTTTTAGTGATCCCGAG 58.400 45.455 0.00 0.00 0.00 4.63
2312 3951 3.260884 AGTGCTTTTTAGTGATCCCGAGA 59.739 43.478 0.00 0.00 0.00 4.04
2313 3952 4.000988 GTGCTTTTTAGTGATCCCGAGAA 58.999 43.478 0.00 0.00 0.00 2.87
2314 3953 4.093556 GTGCTTTTTAGTGATCCCGAGAAG 59.906 45.833 0.00 0.00 0.00 2.85
2315 3954 4.020573 TGCTTTTTAGTGATCCCGAGAAGA 60.021 41.667 0.00 0.00 0.00 2.87
2316 3955 4.935808 GCTTTTTAGTGATCCCGAGAAGAA 59.064 41.667 0.00 0.00 0.00 2.52
2317 3956 5.163844 GCTTTTTAGTGATCCCGAGAAGAAC 60.164 44.000 0.00 0.00 0.00 3.01
2318 3957 5.740290 TTTTAGTGATCCCGAGAAGAACT 57.260 39.130 0.00 0.00 0.00 3.01
2319 3958 6.845758 TTTTAGTGATCCCGAGAAGAACTA 57.154 37.500 0.00 0.00 0.00 2.24
2320 3959 6.845758 TTTAGTGATCCCGAGAAGAACTAA 57.154 37.500 0.00 0.00 0.00 2.24
2321 3960 6.845758 TTAGTGATCCCGAGAAGAACTAAA 57.154 37.500 0.00 0.00 29.42 1.85
2322 3961 5.074584 AGTGATCCCGAGAAGAACTAAAC 57.925 43.478 0.00 0.00 0.00 2.01
2323 3962 4.081586 AGTGATCCCGAGAAGAACTAAACC 60.082 45.833 0.00 0.00 0.00 3.27
2324 3963 3.835978 TGATCCCGAGAAGAACTAAACCA 59.164 43.478 0.00 0.00 0.00 3.67
2325 3964 4.285003 TGATCCCGAGAAGAACTAAACCAA 59.715 41.667 0.00 0.00 0.00 3.67
2326 3965 4.693042 TCCCGAGAAGAACTAAACCAAA 57.307 40.909 0.00 0.00 0.00 3.28
2327 3966 5.237236 TCCCGAGAAGAACTAAACCAAAT 57.763 39.130 0.00 0.00 0.00 2.32
2328 3967 6.363167 TCCCGAGAAGAACTAAACCAAATA 57.637 37.500 0.00 0.00 0.00 1.40
2329 3968 6.771573 TCCCGAGAAGAACTAAACCAAATAA 58.228 36.000 0.00 0.00 0.00 1.40
2330 3969 7.225725 TCCCGAGAAGAACTAAACCAAATAAA 58.774 34.615 0.00 0.00 0.00 1.40
2331 3970 7.173735 TCCCGAGAAGAACTAAACCAAATAAAC 59.826 37.037 0.00 0.00 0.00 2.01
2332 3971 7.040961 CCCGAGAAGAACTAAACCAAATAAACA 60.041 37.037 0.00 0.00 0.00 2.83
2333 3972 7.801783 CCGAGAAGAACTAAACCAAATAAACAC 59.198 37.037 0.00 0.00 0.00 3.32
2334 3973 7.801783 CGAGAAGAACTAAACCAAATAAACACC 59.198 37.037 0.00 0.00 0.00 4.16
2335 3974 8.762481 AGAAGAACTAAACCAAATAAACACCT 57.238 30.769 0.00 0.00 0.00 4.00
2336 3975 9.197306 AGAAGAACTAAACCAAATAAACACCTT 57.803 29.630 0.00 0.00 0.00 3.50
2337 3976 9.811995 GAAGAACTAAACCAAATAAACACCTTT 57.188 29.630 0.00 0.00 0.00 3.11
2339 3978 9.594478 AGAACTAAACCAAATAAACACCTTTTG 57.406 29.630 0.00 0.00 0.00 2.44
2355 3994 5.560722 CCTTTTGGGTGGGTTAGATTTTT 57.439 39.130 0.00 0.00 35.46 1.94
2356 3995 5.304778 CCTTTTGGGTGGGTTAGATTTTTG 58.695 41.667 0.00 0.00 35.46 2.44
2357 3996 4.965200 TTTGGGTGGGTTAGATTTTTGG 57.035 40.909 0.00 0.00 0.00 3.28
2358 3997 3.905493 TGGGTGGGTTAGATTTTTGGA 57.095 42.857 0.00 0.00 0.00 3.53
2359 3998 4.412060 TGGGTGGGTTAGATTTTTGGAT 57.588 40.909 0.00 0.00 0.00 3.41
2360 3999 5.538082 TGGGTGGGTTAGATTTTTGGATA 57.462 39.130 0.00 0.00 0.00 2.59
2361 4000 6.098716 TGGGTGGGTTAGATTTTTGGATAT 57.901 37.500 0.00 0.00 0.00 1.63
2362 4001 6.507568 TGGGTGGGTTAGATTTTTGGATATT 58.492 36.000 0.00 0.00 0.00 1.28
2363 4002 6.962902 TGGGTGGGTTAGATTTTTGGATATTT 59.037 34.615 0.00 0.00 0.00 1.40
2364 4003 7.459444 TGGGTGGGTTAGATTTTTGGATATTTT 59.541 33.333 0.00 0.00 0.00 1.82
2365 4004 8.325787 GGGTGGGTTAGATTTTTGGATATTTTT 58.674 33.333 0.00 0.00 0.00 1.94
2366 4005 9.161629 GGTGGGTTAGATTTTTGGATATTTTTG 57.838 33.333 0.00 0.00 0.00 2.44
2367 4006 9.161629 GTGGGTTAGATTTTTGGATATTTTTGG 57.838 33.333 0.00 0.00 0.00 3.28
2368 4007 9.105844 TGGGTTAGATTTTTGGATATTTTTGGA 57.894 29.630 0.00 0.00 0.00 3.53
2380 4019 8.519799 TGGATATTTTTGGATTAGTTGAGTCC 57.480 34.615 0.00 0.00 0.00 3.85
2381 4020 8.112822 TGGATATTTTTGGATTAGTTGAGTCCA 58.887 33.333 0.00 0.00 40.13 4.02
2388 4027 7.739498 TTGGATTAGTTGAGTCCAAACTAAC 57.261 36.000 14.67 10.28 46.07 2.34
2389 4028 7.074653 TGGATTAGTTGAGTCCAAACTAACT 57.925 36.000 14.67 7.10 38.99 2.24
2390 4029 7.159372 TGGATTAGTTGAGTCCAAACTAACTC 58.841 38.462 14.67 12.98 38.99 3.01
2391 4030 7.016268 TGGATTAGTTGAGTCCAAACTAACTCT 59.984 37.037 14.67 3.78 41.97 3.24
2392 4031 8.529476 GGATTAGTTGAGTCCAAACTAACTCTA 58.471 37.037 14.67 0.00 41.97 2.43
2393 4032 9.924650 GATTAGTTGAGTCCAAACTAACTCTAA 57.075 33.333 14.67 0.00 41.97 2.10
2394 4033 9.708092 ATTAGTTGAGTCCAAACTAACTCTAAC 57.292 33.333 14.67 6.81 41.97 2.34
2395 4034 6.522946 AGTTGAGTCCAAACTAACTCTAACC 58.477 40.000 4.37 0.00 41.97 2.85
2396 4035 5.479124 TGAGTCCAAACTAACTCTAACCC 57.521 43.478 4.37 0.00 41.97 4.11
2397 4036 4.903049 TGAGTCCAAACTAACTCTAACCCA 59.097 41.667 4.37 0.00 41.97 4.51
2398 4037 5.546499 TGAGTCCAAACTAACTCTAACCCAT 59.454 40.000 4.37 0.00 41.97 4.00
2399 4038 5.805728 AGTCCAAACTAACTCTAACCCATG 58.194 41.667 0.00 0.00 32.59 3.66
2400 4039 4.941873 GTCCAAACTAACTCTAACCCATGG 59.058 45.833 4.14 4.14 0.00 3.66
2401 4040 4.847512 TCCAAACTAACTCTAACCCATGGA 59.152 41.667 15.22 0.00 0.00 3.41
2402 4041 5.491078 TCCAAACTAACTCTAACCCATGGAT 59.509 40.000 15.22 4.04 0.00 3.41
2403 4042 5.823045 CCAAACTAACTCTAACCCATGGATC 59.177 44.000 15.22 0.00 0.00 3.36
2404 4043 5.632034 AACTAACTCTAACCCATGGATCC 57.368 43.478 15.22 4.20 0.00 3.36
2405 4044 4.631234 ACTAACTCTAACCCATGGATCCA 58.369 43.478 18.88 18.88 0.00 3.41
2406 4045 5.036916 ACTAACTCTAACCCATGGATCCAA 58.963 41.667 20.67 1.96 0.00 3.53
2407 4046 4.510167 AACTCTAACCCATGGATCCAAG 57.490 45.455 20.67 15.05 0.00 3.61
2408 4047 2.173569 ACTCTAACCCATGGATCCAAGC 59.826 50.000 20.67 0.00 0.00 4.01
2409 4048 2.173356 CTCTAACCCATGGATCCAAGCA 59.827 50.000 20.67 0.00 0.00 3.91
2410 4049 2.173356 TCTAACCCATGGATCCAAGCAG 59.827 50.000 20.67 10.91 0.00 4.24
2411 4050 1.002069 AACCCATGGATCCAAGCAGA 58.998 50.000 20.67 0.00 0.00 4.26
2412 4051 0.549950 ACCCATGGATCCAAGCAGAG 59.450 55.000 20.67 7.24 0.00 3.35
2413 4052 0.822532 CCCATGGATCCAAGCAGAGC 60.823 60.000 20.67 0.00 0.00 4.09
2414 4053 0.822532 CCATGGATCCAAGCAGAGCC 60.823 60.000 20.67 0.00 42.89 4.70
2417 4056 3.509517 GGATCCAAGCAGAGCCAAT 57.490 52.632 6.95 0.00 42.12 3.16
2418 4057 2.645838 GGATCCAAGCAGAGCCAATA 57.354 50.000 6.95 0.00 42.12 1.90
2419 4058 2.936202 GGATCCAAGCAGAGCCAATAA 58.064 47.619 6.95 0.00 42.12 1.40
2420 4059 3.290710 GGATCCAAGCAGAGCCAATAAA 58.709 45.455 6.95 0.00 42.12 1.40
2421 4060 3.701040 GGATCCAAGCAGAGCCAATAAAA 59.299 43.478 6.95 0.00 42.12 1.52
2422 4061 4.440663 GGATCCAAGCAGAGCCAATAAAAC 60.441 45.833 6.95 0.00 42.12 2.43
2423 4062 2.487762 TCCAAGCAGAGCCAATAAAACG 59.512 45.455 0.00 0.00 0.00 3.60
2424 4063 2.487762 CCAAGCAGAGCCAATAAAACGA 59.512 45.455 0.00 0.00 0.00 3.85
2425 4064 3.426695 CCAAGCAGAGCCAATAAAACGAG 60.427 47.826 0.00 0.00 0.00 4.18
2426 4065 2.359900 AGCAGAGCCAATAAAACGAGG 58.640 47.619 0.00 0.00 0.00 4.63
2427 4066 1.401905 GCAGAGCCAATAAAACGAGGG 59.598 52.381 0.00 0.00 0.00 4.30
2428 4067 2.017049 CAGAGCCAATAAAACGAGGGG 58.983 52.381 0.00 0.00 0.00 4.79
2429 4068 1.633945 AGAGCCAATAAAACGAGGGGT 59.366 47.619 0.00 0.00 0.00 4.95
2430 4069 1.743394 GAGCCAATAAAACGAGGGGTG 59.257 52.381 0.00 0.00 0.00 4.61
2431 4070 0.815095 GCCAATAAAACGAGGGGTGG 59.185 55.000 0.00 0.00 0.00 4.61
2432 4071 1.470051 CCAATAAAACGAGGGGTGGG 58.530 55.000 0.00 0.00 0.00 4.61
2433 4072 1.272258 CCAATAAAACGAGGGGTGGGT 60.272 52.381 0.00 0.00 0.00 4.51
2434 4073 2.521126 CAATAAAACGAGGGGTGGGTT 58.479 47.619 0.00 0.00 0.00 4.11
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.432782 GGAGTGACATTACGAACTACCG 58.567 50.000 0.00 0.00 0.00 4.02
1 2 3.446516 AGGGAGTGACATTACGAACTACC 59.553 47.826 0.00 0.00 43.06 3.18
5 6 3.512680 CTGAGGGAGTGACATTACGAAC 58.487 50.000 0.00 0.00 0.00 3.95
7 8 1.476891 GCTGAGGGAGTGACATTACGA 59.523 52.381 0.00 0.00 0.00 3.43
8 9 1.478510 AGCTGAGGGAGTGACATTACG 59.521 52.381 0.00 0.00 0.00 3.18
9 10 2.159028 GGAGCTGAGGGAGTGACATTAC 60.159 54.545 0.00 0.00 0.00 1.89
10 11 2.111384 GGAGCTGAGGGAGTGACATTA 58.889 52.381 0.00 0.00 0.00 1.90
11 12 0.908198 GGAGCTGAGGGAGTGACATT 59.092 55.000 0.00 0.00 0.00 2.71
12 13 0.042431 AGGAGCTGAGGGAGTGACAT 59.958 55.000 0.00 0.00 0.00 3.06
13 14 0.178921 AAGGAGCTGAGGGAGTGACA 60.179 55.000 0.00 0.00 0.00 3.58
14 15 0.980423 AAAGGAGCTGAGGGAGTGAC 59.020 55.000 0.00 0.00 0.00 3.67
15 16 1.734655 AAAAGGAGCTGAGGGAGTGA 58.265 50.000 0.00 0.00 0.00 3.41
16 17 3.922171 ATAAAAGGAGCTGAGGGAGTG 57.078 47.619 0.00 0.00 0.00 3.51
17 18 4.936685 AAATAAAAGGAGCTGAGGGAGT 57.063 40.909 0.00 0.00 0.00 3.85
18 19 4.819088 GCTAAATAAAAGGAGCTGAGGGAG 59.181 45.833 0.00 0.00 32.04 4.30
19 20 4.475016 AGCTAAATAAAAGGAGCTGAGGGA 59.525 41.667 0.00 0.00 43.53 4.20
20 21 4.786425 AGCTAAATAAAAGGAGCTGAGGG 58.214 43.478 0.00 0.00 43.53 4.30
25 26 3.696548 GGTGCAGCTAAATAAAAGGAGCT 59.303 43.478 9.07 0.00 46.08 4.09
26 27 3.443681 TGGTGCAGCTAAATAAAAGGAGC 59.556 43.478 18.08 0.00 35.07 4.70
27 28 5.402398 GTTGGTGCAGCTAAATAAAAGGAG 58.598 41.667 18.08 0.00 0.00 3.69
28 29 4.083003 CGTTGGTGCAGCTAAATAAAAGGA 60.083 41.667 18.08 0.00 0.00 3.36
29 30 4.165779 CGTTGGTGCAGCTAAATAAAAGG 58.834 43.478 18.08 3.01 0.00 3.11
30 31 4.616802 CACGTTGGTGCAGCTAAATAAAAG 59.383 41.667 18.08 6.62 37.35 2.27
31 32 4.541779 CACGTTGGTGCAGCTAAATAAAA 58.458 39.130 18.08 0.00 37.35 1.52
32 33 4.153958 CACGTTGGTGCAGCTAAATAAA 57.846 40.909 18.08 0.00 37.35 1.40
33 34 3.822594 CACGTTGGTGCAGCTAAATAA 57.177 42.857 18.08 0.00 37.35 1.40
44 45 1.266446 TGAATGTGATGCACGTTGGTG 59.734 47.619 9.51 0.00 42.66 4.17
45 46 1.536766 CTGAATGTGATGCACGTTGGT 59.463 47.619 9.51 0.00 42.66 3.67
46 47 1.135603 CCTGAATGTGATGCACGTTGG 60.136 52.381 9.51 2.83 42.66 3.77
47 48 1.805943 TCCTGAATGTGATGCACGTTG 59.194 47.619 9.51 0.00 42.66 4.10
48 49 1.806542 GTCCTGAATGTGATGCACGTT 59.193 47.619 4.81 4.81 44.87 3.99
49 50 1.270785 TGTCCTGAATGTGATGCACGT 60.271 47.619 0.00 0.00 37.14 4.49
50 51 1.129251 GTGTCCTGAATGTGATGCACG 59.871 52.381 0.00 0.00 37.14 5.34
51 52 1.470098 GGTGTCCTGAATGTGATGCAC 59.530 52.381 0.00 0.00 34.56 4.57
52 53 1.352017 AGGTGTCCTGAATGTGATGCA 59.648 47.619 0.00 0.00 29.57 3.96
53 54 2.119801 AGGTGTCCTGAATGTGATGC 57.880 50.000 0.00 0.00 29.57 3.91
54 55 3.624861 GCTTAGGTGTCCTGAATGTGATG 59.375 47.826 0.00 0.00 34.61 3.07
55 56 3.370953 GGCTTAGGTGTCCTGAATGTGAT 60.371 47.826 0.00 0.00 34.61 3.06
56 57 2.027192 GGCTTAGGTGTCCTGAATGTGA 60.027 50.000 0.00 0.00 34.61 3.58
57 58 2.290260 TGGCTTAGGTGTCCTGAATGTG 60.290 50.000 0.00 0.00 34.61 3.21
58 59 1.985159 TGGCTTAGGTGTCCTGAATGT 59.015 47.619 0.00 0.00 34.61 2.71
59 60 2.787473 TGGCTTAGGTGTCCTGAATG 57.213 50.000 0.00 0.00 34.61 2.67
60 61 2.619074 GCTTGGCTTAGGTGTCCTGAAT 60.619 50.000 0.00 0.00 34.61 2.57
61 62 1.271379 GCTTGGCTTAGGTGTCCTGAA 60.271 52.381 0.00 0.00 34.61 3.02
62 63 0.324943 GCTTGGCTTAGGTGTCCTGA 59.675 55.000 0.00 0.00 34.61 3.86
63 64 0.036732 TGCTTGGCTTAGGTGTCCTG 59.963 55.000 0.00 0.00 34.61 3.86
64 65 0.771127 TTGCTTGGCTTAGGTGTCCT 59.229 50.000 0.00 0.00 37.71 3.85
65 66 1.839424 ATTGCTTGGCTTAGGTGTCC 58.161 50.000 0.00 0.00 0.00 4.02
66 67 4.884164 AGAATATTGCTTGGCTTAGGTGTC 59.116 41.667 0.00 0.00 0.00 3.67
67 68 4.860022 AGAATATTGCTTGGCTTAGGTGT 58.140 39.130 0.00 0.00 0.00 4.16
68 69 4.276926 GGAGAATATTGCTTGGCTTAGGTG 59.723 45.833 0.00 0.00 0.00 4.00
69 70 4.464947 GGAGAATATTGCTTGGCTTAGGT 58.535 43.478 0.00 0.00 0.00 3.08
70 71 3.823304 GGGAGAATATTGCTTGGCTTAGG 59.177 47.826 0.00 0.00 0.00 2.69
71 72 4.464008 TGGGAGAATATTGCTTGGCTTAG 58.536 43.478 0.00 0.00 0.00 2.18
72 73 4.518278 TGGGAGAATATTGCTTGGCTTA 57.482 40.909 0.00 0.00 0.00 3.09
73 74 3.386932 TGGGAGAATATTGCTTGGCTT 57.613 42.857 0.00 0.00 0.00 4.35
74 75 3.026694 GTTGGGAGAATATTGCTTGGCT 58.973 45.455 0.00 0.00 0.00 4.75
75 76 2.223572 CGTTGGGAGAATATTGCTTGGC 60.224 50.000 0.00 0.00 0.00 4.52
76 77 2.223572 GCGTTGGGAGAATATTGCTTGG 60.224 50.000 0.00 0.00 0.00 3.61
77 78 2.423185 TGCGTTGGGAGAATATTGCTTG 59.577 45.455 0.00 0.00 0.00 4.01
78 79 2.684881 CTGCGTTGGGAGAATATTGCTT 59.315 45.455 0.00 0.00 32.53 3.91
79 80 2.292267 CTGCGTTGGGAGAATATTGCT 58.708 47.619 0.00 0.00 32.53 3.91
80 81 2.017049 ACTGCGTTGGGAGAATATTGC 58.983 47.619 0.00 0.00 35.29 3.56
81 82 2.285220 CGACTGCGTTGGGAGAATATTG 59.715 50.000 0.00 0.00 35.29 1.90
82 83 2.550978 CGACTGCGTTGGGAGAATATT 58.449 47.619 0.00 0.00 35.29 1.28
83 84 2.225068 CGACTGCGTTGGGAGAATAT 57.775 50.000 0.00 0.00 35.29 1.28
84 85 3.733236 CGACTGCGTTGGGAGAATA 57.267 52.632 0.00 0.00 35.29 1.75
85 86 4.598257 CGACTGCGTTGGGAGAAT 57.402 55.556 0.00 0.00 35.29 2.40
95 96 4.833469 TGTGTTATTATCAACGACTGCG 57.167 40.909 0.00 0.00 44.79 5.18
102 103 4.330740 ACCGCGTTGTGTTATTATCAAC 57.669 40.909 4.92 0.00 38.30 3.18
103 104 5.170021 AGTACCGCGTTGTGTTATTATCAA 58.830 37.500 4.92 0.00 0.00 2.57
104 105 4.746729 AGTACCGCGTTGTGTTATTATCA 58.253 39.130 4.92 0.00 0.00 2.15
105 106 6.201517 TCTAGTACCGCGTTGTGTTATTATC 58.798 40.000 4.92 0.00 0.00 1.75
106 107 6.038603 TCTCTAGTACCGCGTTGTGTTATTAT 59.961 38.462 4.92 0.00 0.00 1.28
107 108 5.353956 TCTCTAGTACCGCGTTGTGTTATTA 59.646 40.000 4.92 0.00 0.00 0.98
108 109 4.156556 TCTCTAGTACCGCGTTGTGTTATT 59.843 41.667 4.92 0.00 0.00 1.40
109 110 3.691118 TCTCTAGTACCGCGTTGTGTTAT 59.309 43.478 4.92 0.00 0.00 1.89
110 111 3.073678 TCTCTAGTACCGCGTTGTGTTA 58.926 45.455 4.92 0.00 0.00 2.41
114 115 1.093159 CCTCTCTAGTACCGCGTTGT 58.907 55.000 4.92 0.00 0.00 3.32
121 122 2.438800 TGTCTGGCCTCTCTAGTACC 57.561 55.000 3.32 0.00 0.00 3.34
168 169 5.371115 AAACTCAACACATTCAATACCGG 57.629 39.130 0.00 0.00 0.00 5.28
219 220 6.279123 TGTACGTGTAAATACCAACAGAACA 58.721 36.000 0.00 0.00 0.00 3.18
239 240 5.582689 AATGCCCAGCTCTAAATTTGTAC 57.417 39.130 0.00 0.00 0.00 2.90
337 338 6.567050 AGGTTTGTGCTTAATATGATTGCAG 58.433 36.000 0.00 0.00 34.15 4.41
351 352 6.031751 TGTCTTTGTTTTTAGGTTTGTGCT 57.968 33.333 0.00 0.00 0.00 4.40
401 410 9.996554 AACCTATTAAAATTTCCTTGGTTTCAG 57.003 29.630 0.00 0.00 32.16 3.02
469 483 9.638176 AGCATGGGATCCAAAAATATATATCTC 57.362 33.333 15.23 0.00 36.95 2.75
474 488 8.954834 TTGTAGCATGGGATCCAAAAATATAT 57.045 30.769 15.23 0.00 36.95 0.86
476 490 7.673641 TTTGTAGCATGGGATCCAAAAATAT 57.326 32.000 15.23 0.00 36.95 1.28
552 571 7.115378 CACATTTTGAGTGATTTTAGGTCAAGC 59.885 37.037 0.00 0.00 39.30 4.01
581 600 5.047092 GGGTCATCATTTCCACAATTGAACT 60.047 40.000 13.59 0.00 0.00 3.01
585 604 4.804868 TGGGTCATCATTTCCACAATTG 57.195 40.909 3.24 3.24 0.00 2.32
636 655 1.482182 TGATTCATGGAGTGTCGAGGG 59.518 52.381 0.00 0.00 0.00 4.30
707 769 1.588824 TACACGTAGAGGGGTGCACG 61.589 60.000 11.45 0.00 37.68 5.34
709 771 0.604578 GTTACACGTAGAGGGGTGCA 59.395 55.000 0.00 0.00 37.68 4.57
775 839 1.683011 GGTCAGTGGAACCCATCATGG 60.683 57.143 0.00 0.00 37.80 3.66
800 879 0.851469 ATGGCCAGCCTGATGATCTT 59.149 50.000 13.05 0.00 36.94 2.40
825 904 4.609559 CGTGTTGCGCTTTTTACTATGTGA 60.610 41.667 9.73 0.00 0.00 3.58
826 905 3.597825 CGTGTTGCGCTTTTTACTATGTG 59.402 43.478 9.73 0.00 0.00 3.21
827 906 3.249080 ACGTGTTGCGCTTTTTACTATGT 59.751 39.130 9.73 0.00 46.11 2.29
828 907 3.805823 ACGTGTTGCGCTTTTTACTATG 58.194 40.909 9.73 0.00 46.11 2.23
829 908 3.495377 TGACGTGTTGCGCTTTTTACTAT 59.505 39.130 9.73 0.00 46.11 2.12
832 911 1.771291 GTGACGTGTTGCGCTTTTTAC 59.229 47.619 9.73 0.00 46.11 2.01
833 912 1.268133 GGTGACGTGTTGCGCTTTTTA 60.268 47.619 9.73 0.00 46.11 1.52
860 949 3.152400 GGGGCATCGGACGGTACT 61.152 66.667 0.00 0.00 0.00 2.73
882 971 1.461512 CACTAGATCGATCGAGACGGG 59.538 57.143 33.53 19.08 34.24 5.28
898 987 1.725557 GCACCGAGCTCGATCCACTA 61.726 60.000 36.59 0.00 43.02 2.74
899 988 3.069980 GCACCGAGCTCGATCCACT 62.070 63.158 36.59 8.93 43.02 4.00
900 989 2.583593 GCACCGAGCTCGATCCAC 60.584 66.667 36.59 16.90 43.02 4.02
901 990 3.838271 GGCACCGAGCTCGATCCA 61.838 66.667 36.59 0.00 44.79 3.41
1015 1117 1.971167 TTGTGGAGAATGGTGCGCC 60.971 57.895 10.11 10.11 0.00 6.53
1018 1120 1.210155 GCGTTGTGGAGAATGGTGC 59.790 57.895 0.00 0.00 0.00 5.01
1020 1122 0.606401 CCTGCGTTGTGGAGAATGGT 60.606 55.000 0.00 0.00 38.54 3.55
1042 1163 2.743928 CGGTGAGGAGTTGGCTGC 60.744 66.667 0.00 0.00 0.00 5.25
1059 1182 2.354656 TCTGTGCGACTGTGCGTC 60.355 61.111 0.00 0.00 39.33 5.19
1080 1203 0.601311 GGTGAAGCTGTTCTCGTGCT 60.601 55.000 0.00 0.00 38.87 4.40
1089 1212 0.398318 GAGGGAAGTGGTGAAGCTGT 59.602 55.000 0.00 0.00 0.00 4.40
1111 1234 1.615124 TTCTTGGGCTCGGATGGGA 60.615 57.895 0.00 0.00 0.00 4.37
1112 1235 1.153086 CTTCTTGGGCTCGGATGGG 60.153 63.158 0.00 0.00 0.00 4.00
1113 1236 1.821332 GCTTCTTGGGCTCGGATGG 60.821 63.158 0.00 0.00 0.00 3.51
1114 1237 1.078214 TGCTTCTTGGGCTCGGATG 60.078 57.895 0.00 0.00 0.00 3.51
1125 1248 0.038892 CGCCATTGTTGCTGCTTCTT 60.039 50.000 0.00 0.00 0.00 2.52
1126 1249 1.582968 CGCCATTGTTGCTGCTTCT 59.417 52.632 0.00 0.00 0.00 2.85
1127 1250 1.444895 CCGCCATTGTTGCTGCTTC 60.445 57.895 0.00 0.00 0.00 3.86
1131 1254 3.951655 GACGCCGCCATTGTTGCTG 62.952 63.158 0.00 0.00 0.00 4.41
1382 1506 0.238553 GAAGACCTTCTTGCCGTTGC 59.761 55.000 2.69 0.00 36.73 4.17
1418 1542 0.403271 AGTTCAGCATCTTGGCAGGT 59.597 50.000 0.00 0.00 35.83 4.00
1428 1552 5.061853 CAGCACCAATATCTAGTTCAGCAT 58.938 41.667 0.00 0.00 0.00 3.79
1440 1564 1.185315 GGCACCAACAGCACCAATAT 58.815 50.000 0.00 0.00 0.00 1.28
1492 1616 1.915769 GGGACAGTGAGCTGAGGGT 60.916 63.158 0.00 0.00 45.28 4.34
1498 1622 3.386237 GGCGAGGGACAGTGAGCT 61.386 66.667 0.00 0.00 0.00 4.09
1519 1643 1.982660 TCTTCGTCAGTGAGTCAGGT 58.017 50.000 0.00 0.00 0.00 4.00
1598 1723 2.352421 CGAGAAAAGGAGAAGGCGTACA 60.352 50.000 0.00 0.00 0.00 2.90
1661 1786 1.301479 CTCGCGGGTATAAAGCCCC 60.301 63.158 6.13 0.00 43.18 5.80
1815 3443 4.728102 CGGGCCGTTGCGTGTAGA 62.728 66.667 19.97 0.00 38.85 2.59
1859 3497 2.534019 CGTGACCAGGTGTGTGTGC 61.534 63.158 0.00 0.00 0.00 4.57
1991 3630 0.453793 ACAGAGATGGACGAAGCTCG 59.546 55.000 0.00 4.36 46.93 5.03
1992 3631 1.748493 AGACAGAGATGGACGAAGCTC 59.252 52.381 0.00 0.00 0.00 4.09
1993 3632 1.748493 GAGACAGAGATGGACGAAGCT 59.252 52.381 0.00 0.00 0.00 3.74
1994 3633 1.532921 CGAGACAGAGATGGACGAAGC 60.533 57.143 0.00 0.00 0.00 3.86
1995 3634 1.532921 GCGAGACAGAGATGGACGAAG 60.533 57.143 0.00 0.00 0.00 3.79
1996 3635 0.452184 GCGAGACAGAGATGGACGAA 59.548 55.000 0.00 0.00 0.00 3.85
1997 3636 1.706287 CGCGAGACAGAGATGGACGA 61.706 60.000 0.00 0.00 0.00 4.20
1998 3637 1.297967 CGCGAGACAGAGATGGACG 60.298 63.158 0.00 0.00 0.00 4.79
1999 3638 1.587613 GCGCGAGACAGAGATGGAC 60.588 63.158 12.10 0.00 0.00 4.02
2000 3639 2.801421 GCGCGAGACAGAGATGGA 59.199 61.111 12.10 0.00 0.00 3.41
2001 3640 2.653448 CGCGCGAGACAGAGATGG 60.653 66.667 28.94 0.00 0.00 3.51
2002 3641 2.101185 ACGCGCGAGACAGAGATG 59.899 61.111 39.36 2.23 0.00 2.90
2003 3642 2.101185 CACGCGCGAGACAGAGAT 59.899 61.111 39.36 7.53 0.00 2.75
2004 3643 3.047877 TCACGCGCGAGACAGAGA 61.048 61.111 39.36 17.85 0.00 3.10
2005 3644 2.872001 GTCACGCGCGAGACAGAG 60.872 66.667 41.60 21.15 36.11 3.35
2006 3645 2.472232 ATTGTCACGCGCGAGACAGA 62.472 55.000 44.01 36.42 44.02 3.41
2007 3646 2.088763 ATTGTCACGCGCGAGACAG 61.089 57.895 44.01 26.18 44.02 3.51
2008 3647 2.049526 ATTGTCACGCGCGAGACA 60.050 55.556 44.09 44.09 42.27 3.41
2009 3648 2.372690 ACATTGTCACGCGCGAGAC 61.373 57.895 40.68 40.68 36.50 3.36
2010 3649 2.049526 ACATTGTCACGCGCGAGA 60.050 55.556 39.36 32.28 0.00 4.04
2011 3650 2.094539 CACATTGTCACGCGCGAG 59.905 61.111 39.36 30.24 0.00 5.03
2012 3651 4.070818 GCACATTGTCACGCGCGA 62.071 61.111 39.36 14.91 0.00 5.87
2014 3653 4.024143 TGGCACATTGTCACGCGC 62.024 61.111 5.73 0.00 0.00 6.86
2026 3665 4.054825 CACCAACGGCCATGGCAC 62.055 66.667 36.56 24.28 41.89 5.01
2027 3666 3.197579 TACACCAACGGCCATGGCA 62.198 57.895 36.56 11.44 41.89 4.92
2028 3667 2.360600 TACACCAACGGCCATGGC 60.361 61.111 29.47 29.47 41.89 4.40
2029 3668 2.395360 CGTACACCAACGGCCATGG 61.395 63.158 20.37 20.37 43.84 3.66
2030 3669 1.632046 GACGTACACCAACGGCCATG 61.632 60.000 2.24 0.00 45.33 3.66
2031 3670 1.375013 GACGTACACCAACGGCCAT 60.375 57.895 2.24 0.00 45.33 4.40
2032 3671 2.029369 GACGTACACCAACGGCCA 59.971 61.111 2.24 0.00 45.33 5.36
2036 3675 0.866906 ACACGTGACGTACACCAACG 60.867 55.000 25.01 0.00 45.73 4.10
2037 3676 1.780860 GTACACGTGACGTACACCAAC 59.219 52.381 25.01 0.00 45.73 3.77
2038 3677 1.596709 CGTACACGTGACGTACACCAA 60.597 52.381 25.01 0.00 45.73 3.67
2039 3678 0.041400 CGTACACGTGACGTACACCA 60.041 55.000 25.01 0.00 45.73 4.17
2040 3679 2.699910 CGTACACGTGACGTACACC 58.300 57.895 25.01 0.00 45.73 4.16
2051 3690 1.274596 GCCATTACCTCACGTACACG 58.725 55.000 0.00 0.00 46.33 4.49
2052 3691 1.648504 GGCCATTACCTCACGTACAC 58.351 55.000 0.00 0.00 0.00 2.90
2053 3692 0.538118 GGGCCATTACCTCACGTACA 59.462 55.000 4.39 0.00 0.00 2.90
2054 3693 0.529119 CGGGCCATTACCTCACGTAC 60.529 60.000 4.39 0.00 0.00 3.67
2055 3694 1.678598 CCGGGCCATTACCTCACGTA 61.679 60.000 4.39 0.00 0.00 3.57
2056 3695 2.582436 CGGGCCATTACCTCACGT 59.418 61.111 4.39 0.00 0.00 4.49
2057 3696 2.203015 CCGGGCCATTACCTCACG 60.203 66.667 4.39 0.00 0.00 4.35
2058 3697 0.323087 AAACCGGGCCATTACCTCAC 60.323 55.000 6.32 0.00 0.00 3.51
2059 3698 0.322997 CAAACCGGGCCATTACCTCA 60.323 55.000 6.32 0.00 0.00 3.86
2060 3699 1.035385 CCAAACCGGGCCATTACCTC 61.035 60.000 6.32 0.00 0.00 3.85
2061 3700 1.000145 CCAAACCGGGCCATTACCT 60.000 57.895 6.32 0.00 0.00 3.08
2062 3701 0.396556 ATCCAAACCGGGCCATTACC 60.397 55.000 6.32 0.00 34.36 2.85
2063 3702 1.951602 GTATCCAAACCGGGCCATTAC 59.048 52.381 6.32 0.00 34.36 1.89
2064 3703 1.847737 AGTATCCAAACCGGGCCATTA 59.152 47.619 6.32 0.00 34.36 1.90
2065 3704 0.629058 AGTATCCAAACCGGGCCATT 59.371 50.000 6.32 0.00 34.36 3.16
2066 3705 0.182775 GAGTATCCAAACCGGGCCAT 59.817 55.000 6.32 0.00 34.36 4.40
2067 3706 0.912487 AGAGTATCCAAACCGGGCCA 60.912 55.000 6.32 0.00 33.66 5.36
2068 3707 1.125633 TAGAGTATCCAAACCGGGCC 58.874 55.000 6.32 0.00 33.66 5.80
2069 3708 2.169978 AGTTAGAGTATCCAAACCGGGC 59.830 50.000 6.32 0.00 33.37 6.13
2070 3709 3.449737 TCAGTTAGAGTATCCAAACCGGG 59.550 47.826 6.32 0.00 33.37 5.73
2071 3710 4.683832 CTCAGTTAGAGTATCCAAACCGG 58.316 47.826 0.00 0.00 39.62 5.28
2104 3743 9.140874 GGTTAGTTTAGGGCTAGAATCTAACTA 57.859 37.037 15.48 10.47 37.33 2.24
2105 3744 7.845289 AGGTTAGTTTAGGGCTAGAATCTAACT 59.155 37.037 15.48 11.14 37.33 2.24
2106 3745 8.020777 AGGTTAGTTTAGGGCTAGAATCTAAC 57.979 38.462 0.00 4.46 36.81 2.34
2107 3746 8.483758 CAAGGTTAGTTTAGGGCTAGAATCTAA 58.516 37.037 0.00 0.00 0.00 2.10
2108 3747 7.842743 TCAAGGTTAGTTTAGGGCTAGAATCTA 59.157 37.037 0.00 0.00 0.00 1.98
2109 3748 6.672657 TCAAGGTTAGTTTAGGGCTAGAATCT 59.327 38.462 0.00 0.00 0.00 2.40
2110 3749 6.885922 TCAAGGTTAGTTTAGGGCTAGAATC 58.114 40.000 0.00 0.00 0.00 2.52
2111 3750 6.886178 TCAAGGTTAGTTTAGGGCTAGAAT 57.114 37.500 0.00 0.00 0.00 2.40
2112 3751 6.271624 AGTTCAAGGTTAGTTTAGGGCTAGAA 59.728 38.462 0.00 0.00 0.00 2.10
2113 3752 5.783875 AGTTCAAGGTTAGTTTAGGGCTAGA 59.216 40.000 0.00 0.00 0.00 2.43
2114 3753 6.051179 AGTTCAAGGTTAGTTTAGGGCTAG 57.949 41.667 0.00 0.00 0.00 3.42
2115 3754 7.236225 AGTTAGTTCAAGGTTAGTTTAGGGCTA 59.764 37.037 0.00 0.00 0.00 3.93
2116 3755 4.995624 AGTTCAAGGTTAGTTTAGGGCT 57.004 40.909 0.00 0.00 0.00 5.19
2117 3756 6.236409 AGTTAGTTCAAGGTTAGTTTAGGGC 58.764 40.000 0.00 0.00 0.00 5.19
2118 3757 8.687292 AAAGTTAGTTCAAGGTTAGTTTAGGG 57.313 34.615 0.00 0.00 0.00 3.53
2121 3760 9.276590 GGCTAAAGTTAGTTCAAGGTTAGTTTA 57.723 33.333 0.32 0.00 33.32 2.01
2122 3761 7.041576 CGGCTAAAGTTAGTTCAAGGTTAGTTT 60.042 37.037 0.32 0.00 33.32 2.66
2123 3762 6.426025 CGGCTAAAGTTAGTTCAAGGTTAGTT 59.574 38.462 0.32 0.00 33.32 2.24
2124 3763 5.930569 CGGCTAAAGTTAGTTCAAGGTTAGT 59.069 40.000 0.32 0.00 33.32 2.24
2125 3764 6.161381 TCGGCTAAAGTTAGTTCAAGGTTAG 58.839 40.000 0.32 0.00 33.32 2.34
2126 3765 6.100404 TCGGCTAAAGTTAGTTCAAGGTTA 57.900 37.500 0.32 0.00 33.32 2.85
2127 3766 4.964593 TCGGCTAAAGTTAGTTCAAGGTT 58.035 39.130 0.32 0.00 33.32 3.50
2128 3767 4.612264 TCGGCTAAAGTTAGTTCAAGGT 57.388 40.909 0.32 0.00 33.32 3.50
2129 3768 5.175859 TCATCGGCTAAAGTTAGTTCAAGG 58.824 41.667 0.32 0.00 33.32 3.61
2130 3769 5.292101 CCTCATCGGCTAAAGTTAGTTCAAG 59.708 44.000 0.32 0.00 33.32 3.02
2131 3770 5.175859 CCTCATCGGCTAAAGTTAGTTCAA 58.824 41.667 0.32 0.00 33.32 2.69
2132 3771 4.222145 ACCTCATCGGCTAAAGTTAGTTCA 59.778 41.667 0.32 0.00 35.61 3.18
2133 3772 4.567159 CACCTCATCGGCTAAAGTTAGTTC 59.433 45.833 0.32 0.00 35.61 3.01
2134 3773 4.020485 ACACCTCATCGGCTAAAGTTAGTT 60.020 41.667 0.32 0.00 35.61 2.24
2135 3774 3.514309 ACACCTCATCGGCTAAAGTTAGT 59.486 43.478 0.32 0.00 35.61 2.24
2136 3775 4.124851 ACACCTCATCGGCTAAAGTTAG 57.875 45.455 0.00 0.00 35.61 2.34
2137 3776 4.546829 AACACCTCATCGGCTAAAGTTA 57.453 40.909 0.00 0.00 35.61 2.24
2138 3777 3.418684 AACACCTCATCGGCTAAAGTT 57.581 42.857 0.00 0.00 35.61 2.66
2139 3778 3.074412 CAAACACCTCATCGGCTAAAGT 58.926 45.455 0.00 0.00 35.61 2.66
2140 3779 2.420022 CCAAACACCTCATCGGCTAAAG 59.580 50.000 0.00 0.00 35.61 1.85
2141 3780 2.039216 TCCAAACACCTCATCGGCTAAA 59.961 45.455 0.00 0.00 35.61 1.85
2142 3781 1.626321 TCCAAACACCTCATCGGCTAA 59.374 47.619 0.00 0.00 35.61 3.09
2143 3782 1.271856 TCCAAACACCTCATCGGCTA 58.728 50.000 0.00 0.00 35.61 3.93
2144 3783 0.620556 ATCCAAACACCTCATCGGCT 59.379 50.000 0.00 0.00 35.61 5.52
2145 3784 0.734889 CATCCAAACACCTCATCGGC 59.265 55.000 0.00 0.00 35.61 5.54
2146 3785 2.009774 GTCATCCAAACACCTCATCGG 58.990 52.381 0.00 0.00 39.35 4.18
2147 3786 2.674852 CTGTCATCCAAACACCTCATCG 59.325 50.000 0.00 0.00 0.00 3.84
2148 3787 3.438087 CACTGTCATCCAAACACCTCATC 59.562 47.826 0.00 0.00 0.00 2.92
2149 3788 3.181440 ACACTGTCATCCAAACACCTCAT 60.181 43.478 0.00 0.00 0.00 2.90
2150 3789 2.172505 ACACTGTCATCCAAACACCTCA 59.827 45.455 0.00 0.00 0.00 3.86
2151 3790 2.851195 ACACTGTCATCCAAACACCTC 58.149 47.619 0.00 0.00 0.00 3.85
2152 3791 3.297134 AACACTGTCATCCAAACACCT 57.703 42.857 0.00 0.00 0.00 4.00
2153 3792 4.385825 TCTAACACTGTCATCCAAACACC 58.614 43.478 0.00 0.00 0.00 4.16
2154 3793 5.106555 CCATCTAACACTGTCATCCAAACAC 60.107 44.000 0.00 0.00 0.00 3.32
2155 3794 5.003160 CCATCTAACACTGTCATCCAAACA 58.997 41.667 0.00 0.00 0.00 2.83
2156 3795 5.245531 TCCATCTAACACTGTCATCCAAAC 58.754 41.667 0.00 0.00 0.00 2.93
2157 3796 5.491070 CTCCATCTAACACTGTCATCCAAA 58.509 41.667 0.00 0.00 0.00 3.28
2158 3797 4.623886 GCTCCATCTAACACTGTCATCCAA 60.624 45.833 0.00 0.00 0.00 3.53
2159 3798 3.118629 GCTCCATCTAACACTGTCATCCA 60.119 47.826 0.00 0.00 0.00 3.41
2160 3799 3.462021 GCTCCATCTAACACTGTCATCC 58.538 50.000 0.00 0.00 0.00 3.51
2161 3800 3.119291 CGCTCCATCTAACACTGTCATC 58.881 50.000 0.00 0.00 0.00 2.92
2162 3801 2.739932 GCGCTCCATCTAACACTGTCAT 60.740 50.000 0.00 0.00 0.00 3.06
2163 3802 1.404181 GCGCTCCATCTAACACTGTCA 60.404 52.381 0.00 0.00 0.00 3.58
2164 3803 1.281899 GCGCTCCATCTAACACTGTC 58.718 55.000 0.00 0.00 0.00 3.51
2165 3804 0.458543 CGCGCTCCATCTAACACTGT 60.459 55.000 5.56 0.00 0.00 3.55
2166 3805 1.148157 CCGCGCTCCATCTAACACTG 61.148 60.000 5.56 0.00 0.00 3.66
2167 3806 1.141881 CCGCGCTCCATCTAACACT 59.858 57.895 5.56 0.00 0.00 3.55
2168 3807 0.249489 ATCCGCGCTCCATCTAACAC 60.249 55.000 5.56 0.00 0.00 3.32
2169 3808 1.000607 GTATCCGCGCTCCATCTAACA 60.001 52.381 5.56 0.00 0.00 2.41
2170 3809 1.699343 GTATCCGCGCTCCATCTAAC 58.301 55.000 5.56 0.00 0.00 2.34
2171 3810 0.240145 CGTATCCGCGCTCCATCTAA 59.760 55.000 5.56 0.00 0.00 2.10
2172 3811 1.583495 CCGTATCCGCGCTCCATCTA 61.583 60.000 5.56 0.00 0.00 1.98
2173 3812 2.645567 CGTATCCGCGCTCCATCT 59.354 61.111 5.56 0.00 0.00 2.90
2174 3813 2.430921 CCGTATCCGCGCTCCATC 60.431 66.667 5.56 0.00 0.00 3.51
2175 3814 3.224324 ACCGTATCCGCGCTCCAT 61.224 61.111 5.56 0.00 0.00 3.41
2176 3815 4.201679 CACCGTATCCGCGCTCCA 62.202 66.667 5.56 0.00 0.00 3.86
2177 3816 3.825833 CTCACCGTATCCGCGCTCC 62.826 68.421 5.56 0.00 0.00 4.70
2178 3817 2.353607 CTCACCGTATCCGCGCTC 60.354 66.667 5.56 0.00 0.00 5.03
2179 3818 3.900892 CCTCACCGTATCCGCGCT 61.901 66.667 5.56 0.00 0.00 5.92
2183 3822 4.944372 GGCGCCTCACCGTATCCG 62.944 72.222 22.15 0.00 0.00 4.18
2184 3823 2.973180 GAAGGCGCCTCACCGTATCC 62.973 65.000 32.93 6.70 0.00 2.59
2185 3824 1.591863 GAAGGCGCCTCACCGTATC 60.592 63.158 32.93 18.35 0.00 2.24
2186 3825 2.355986 TGAAGGCGCCTCACCGTAT 61.356 57.895 32.93 12.84 0.00 3.06
2187 3826 2.992689 TGAAGGCGCCTCACCGTA 60.993 61.111 32.93 9.80 0.00 4.02
2188 3827 4.681978 GTGAAGGCGCCTCACCGT 62.682 66.667 31.94 19.74 0.00 4.83
2206 3845 4.803426 CTCACTCTCGCACCGCCC 62.803 72.222 0.00 0.00 0.00 6.13
2207 3846 4.803426 CCTCACTCTCGCACCGCC 62.803 72.222 0.00 0.00 0.00 6.13
2208 3847 4.803426 CCCTCACTCTCGCACCGC 62.803 72.222 0.00 0.00 0.00 5.68
2209 3848 4.135153 CCCCTCACTCTCGCACCG 62.135 72.222 0.00 0.00 0.00 4.94
2210 3849 3.775654 CCCCCTCACTCTCGCACC 61.776 72.222 0.00 0.00 0.00 5.01
2224 3863 0.915364 AGCTTCTTGTCATCTCCCCC 59.085 55.000 0.00 0.00 0.00 5.40
2225 3864 2.026822 TGAAGCTTCTTGTCATCTCCCC 60.027 50.000 26.09 0.00 0.00 4.81
2226 3865 3.340814 TGAAGCTTCTTGTCATCTCCC 57.659 47.619 26.09 0.00 0.00 4.30
2227 3866 3.688673 CCTTGAAGCTTCTTGTCATCTCC 59.311 47.826 26.09 0.00 0.00 3.71
2228 3867 4.573900 TCCTTGAAGCTTCTTGTCATCTC 58.426 43.478 26.09 0.00 0.00 2.75
2229 3868 4.630644 TCCTTGAAGCTTCTTGTCATCT 57.369 40.909 26.09 0.00 0.00 2.90
2230 3869 4.759183 ACTTCCTTGAAGCTTCTTGTCATC 59.241 41.667 26.09 0.00 42.79 2.92
2231 3870 4.518211 CACTTCCTTGAAGCTTCTTGTCAT 59.482 41.667 26.09 5.07 42.79 3.06
2232 3871 3.879295 CACTTCCTTGAAGCTTCTTGTCA 59.121 43.478 26.09 4.34 42.79 3.58
2233 3872 4.130118 TCACTTCCTTGAAGCTTCTTGTC 58.870 43.478 26.09 1.33 42.79 3.18
2234 3873 4.133078 CTCACTTCCTTGAAGCTTCTTGT 58.867 43.478 26.09 12.71 42.79 3.16
2235 3874 3.501445 CCTCACTTCCTTGAAGCTTCTTG 59.499 47.826 26.09 17.66 42.79 3.02
2236 3875 3.392616 TCCTCACTTCCTTGAAGCTTCTT 59.607 43.478 26.09 0.00 42.79 2.52
2237 3876 2.975489 TCCTCACTTCCTTGAAGCTTCT 59.025 45.455 26.09 2.03 42.79 2.85
2238 3877 3.409026 TCCTCACTTCCTTGAAGCTTC 57.591 47.619 19.89 19.89 42.79 3.86
2239 3878 3.497584 CCTTCCTCACTTCCTTGAAGCTT 60.498 47.826 0.00 0.00 42.79 3.74
2240 3879 2.039613 CCTTCCTCACTTCCTTGAAGCT 59.960 50.000 3.82 0.00 42.79 3.74
2241 3880 2.039084 TCCTTCCTCACTTCCTTGAAGC 59.961 50.000 3.82 0.00 42.79 3.86
2242 3881 4.224818 AGATCCTTCCTCACTTCCTTGAAG 59.775 45.833 2.40 2.40 44.37 3.02
2243 3882 4.171234 AGATCCTTCCTCACTTCCTTGAA 58.829 43.478 0.00 0.00 0.00 2.69
2244 3883 3.772025 GAGATCCTTCCTCACTTCCTTGA 59.228 47.826 0.00 0.00 0.00 3.02
2245 3884 3.118445 GGAGATCCTTCCTCACTTCCTTG 60.118 52.174 0.00 0.00 34.27 3.61
2246 3885 3.111484 GGAGATCCTTCCTCACTTCCTT 58.889 50.000 0.00 0.00 34.27 3.36
2247 3886 2.317594 AGGAGATCCTTCCTCACTTCCT 59.682 50.000 0.00 0.00 46.09 3.36
2248 3887 2.433970 CAGGAGATCCTTCCTCACTTCC 59.566 54.545 0.00 0.00 46.09 3.46
2249 3888 2.158971 GCAGGAGATCCTTCCTCACTTC 60.159 54.545 0.00 0.00 46.09 3.01
2250 3889 1.836802 GCAGGAGATCCTTCCTCACTT 59.163 52.381 0.00 0.00 46.09 3.16
2251 3890 1.494960 GCAGGAGATCCTTCCTCACT 58.505 55.000 0.00 0.00 46.09 3.41
2252 3891 0.103937 CGCAGGAGATCCTTCCTCAC 59.896 60.000 0.00 0.00 46.09 3.51
2253 3892 2.509512 CGCAGGAGATCCTTCCTCA 58.490 57.895 0.00 0.00 46.09 3.86
2267 3906 4.521062 CTCTCGCCCTTCCCGCAG 62.521 72.222 0.00 0.00 0.00 5.18
2269 3908 2.798148 TTTTCTCTCGCCCTTCCCGC 62.798 60.000 0.00 0.00 0.00 6.13
2270 3909 0.321298 TTTTTCTCTCGCCCTTCCCG 60.321 55.000 0.00 0.00 0.00 5.14
2271 3910 3.644861 TTTTTCTCTCGCCCTTCCC 57.355 52.632 0.00 0.00 0.00 3.97
2287 3926 4.825085 TCGGGATCACTAAAAAGCACTTTT 59.175 37.500 2.53 2.53 43.88 2.27
2288 3927 4.394729 TCGGGATCACTAAAAAGCACTTT 58.605 39.130 0.00 0.00 0.00 2.66
2289 3928 4.003648 CTCGGGATCACTAAAAAGCACTT 58.996 43.478 0.00 0.00 0.00 3.16
2290 3929 3.260884 TCTCGGGATCACTAAAAAGCACT 59.739 43.478 0.00 0.00 0.00 4.40
2291 3930 3.596214 TCTCGGGATCACTAAAAAGCAC 58.404 45.455 0.00 0.00 0.00 4.40
2292 3931 3.973206 TCTCGGGATCACTAAAAAGCA 57.027 42.857 0.00 0.00 0.00 3.91
2293 3932 4.504858 TCTTCTCGGGATCACTAAAAAGC 58.495 43.478 0.00 0.00 0.00 3.51
2294 3933 6.166982 AGTTCTTCTCGGGATCACTAAAAAG 58.833 40.000 0.00 0.00 0.00 2.27
2295 3934 6.110411 AGTTCTTCTCGGGATCACTAAAAA 57.890 37.500 0.00 0.00 0.00 1.94
2296 3935 5.740290 AGTTCTTCTCGGGATCACTAAAA 57.260 39.130 0.00 0.00 0.00 1.52
2297 3936 6.845758 TTAGTTCTTCTCGGGATCACTAAA 57.154 37.500 8.36 0.00 0.00 1.85
2298 3937 6.350780 GGTTTAGTTCTTCTCGGGATCACTAA 60.351 42.308 7.18 7.18 0.00 2.24
2299 3938 5.126707 GGTTTAGTTCTTCTCGGGATCACTA 59.873 44.000 0.00 0.00 0.00 2.74
2300 3939 4.081586 GGTTTAGTTCTTCTCGGGATCACT 60.082 45.833 0.00 0.00 0.00 3.41
2301 3940 4.182339 GGTTTAGTTCTTCTCGGGATCAC 58.818 47.826 0.00 0.00 0.00 3.06
2302 3941 3.835978 TGGTTTAGTTCTTCTCGGGATCA 59.164 43.478 0.00 0.00 0.00 2.92
2303 3942 4.467198 TGGTTTAGTTCTTCTCGGGATC 57.533 45.455 0.00 0.00 0.00 3.36
2304 3943 4.903045 TTGGTTTAGTTCTTCTCGGGAT 57.097 40.909 0.00 0.00 0.00 3.85
2305 3944 4.693042 TTTGGTTTAGTTCTTCTCGGGA 57.307 40.909 0.00 0.00 0.00 5.14
2306 3945 7.040961 TGTTTATTTGGTTTAGTTCTTCTCGGG 60.041 37.037 0.00 0.00 0.00 5.14
2307 3946 7.801783 GTGTTTATTTGGTTTAGTTCTTCTCGG 59.198 37.037 0.00 0.00 0.00 4.63
2308 3947 7.801783 GGTGTTTATTTGGTTTAGTTCTTCTCG 59.198 37.037 0.00 0.00 0.00 4.04
2309 3948 8.847196 AGGTGTTTATTTGGTTTAGTTCTTCTC 58.153 33.333 0.00 0.00 0.00 2.87
2310 3949 8.762481 AGGTGTTTATTTGGTTTAGTTCTTCT 57.238 30.769 0.00 0.00 0.00 2.85
2311 3950 9.811995 AAAGGTGTTTATTTGGTTTAGTTCTTC 57.188 29.630 0.00 0.00 0.00 2.87
2313 3952 9.594478 CAAAAGGTGTTTATTTGGTTTAGTTCT 57.406 29.630 0.00 0.00 31.93 3.01
2314 3953 8.822855 CCAAAAGGTGTTTATTTGGTTTAGTTC 58.177 33.333 8.06 0.00 45.09 3.01
2315 3954 8.725405 CCAAAAGGTGTTTATTTGGTTTAGTT 57.275 30.769 8.06 0.00 45.09 2.24
2333 3972 5.304778 CAAAAATCTAACCCACCCAAAAGG 58.695 41.667 0.00 0.00 43.78 3.11
2334 3973 5.071115 TCCAAAAATCTAACCCACCCAAAAG 59.929 40.000 0.00 0.00 0.00 2.27
2335 3974 4.969359 TCCAAAAATCTAACCCACCCAAAA 59.031 37.500 0.00 0.00 0.00 2.44
2336 3975 4.557705 TCCAAAAATCTAACCCACCCAAA 58.442 39.130 0.00 0.00 0.00 3.28
2337 3976 4.200447 TCCAAAAATCTAACCCACCCAA 57.800 40.909 0.00 0.00 0.00 4.12
2338 3977 3.905493 TCCAAAAATCTAACCCACCCA 57.095 42.857 0.00 0.00 0.00 4.51
2339 3978 7.432148 AAATATCCAAAAATCTAACCCACCC 57.568 36.000 0.00 0.00 0.00 4.61
2340 3979 9.161629 CAAAAATATCCAAAAATCTAACCCACC 57.838 33.333 0.00 0.00 0.00 4.61
2341 3980 9.161629 CCAAAAATATCCAAAAATCTAACCCAC 57.838 33.333 0.00 0.00 0.00 4.61
2342 3981 9.105844 TCCAAAAATATCCAAAAATCTAACCCA 57.894 29.630 0.00 0.00 0.00 4.51
2354 3993 8.966868 GGACTCAACTAATCCAAAAATATCCAA 58.033 33.333 0.00 0.00 32.35 3.53
2355 3994 8.112822 TGGACTCAACTAATCCAAAAATATCCA 58.887 33.333 0.00 0.00 39.60 3.41
2356 3995 8.519799 TGGACTCAACTAATCCAAAAATATCC 57.480 34.615 0.00 0.00 39.60 2.59
2365 4004 7.016268 AGAGTTAGTTTGGACTCAACTAATCCA 59.984 37.037 8.17 0.00 43.65 3.41
2366 4005 7.387643 AGAGTTAGTTTGGACTCAACTAATCC 58.612 38.462 8.17 4.63 43.65 3.01
2367 4006 9.924650 TTAGAGTTAGTTTGGACTCAACTAATC 57.075 33.333 8.17 7.34 43.65 1.75
2368 4007 9.708092 GTTAGAGTTAGTTTGGACTCAACTAAT 57.292 33.333 8.17 0.13 43.65 1.73
2369 4008 8.146412 GGTTAGAGTTAGTTTGGACTCAACTAA 58.854 37.037 6.31 1.91 43.65 2.24
2370 4009 7.256083 GGGTTAGAGTTAGTTTGGACTCAACTA 60.256 40.741 6.31 0.00 43.65 2.24
2371 4010 6.464039 GGGTTAGAGTTAGTTTGGACTCAACT 60.464 42.308 6.31 0.00 43.65 3.16
2372 4011 5.699915 GGGTTAGAGTTAGTTTGGACTCAAC 59.300 44.000 6.31 7.78 43.65 3.18
2373 4012 5.367352 TGGGTTAGAGTTAGTTTGGACTCAA 59.633 40.000 6.31 0.00 43.65 3.02
2374 4013 4.903049 TGGGTTAGAGTTAGTTTGGACTCA 59.097 41.667 6.31 0.00 43.65 3.41
2375 4014 5.479124 TGGGTTAGAGTTAGTTTGGACTC 57.521 43.478 0.00 0.00 41.99 3.36
2376 4015 5.280521 CCATGGGTTAGAGTTAGTTTGGACT 60.281 44.000 2.85 0.00 39.97 3.85
2377 4016 4.941873 CCATGGGTTAGAGTTAGTTTGGAC 59.058 45.833 2.85 0.00 0.00 4.02
2378 4017 4.847512 TCCATGGGTTAGAGTTAGTTTGGA 59.152 41.667 13.02 0.00 0.00 3.53
2379 4018 5.174037 TCCATGGGTTAGAGTTAGTTTGG 57.826 43.478 13.02 0.00 0.00 3.28
2380 4019 5.823045 GGATCCATGGGTTAGAGTTAGTTTG 59.177 44.000 13.02 0.00 0.00 2.93
2381 4020 5.491078 TGGATCCATGGGTTAGAGTTAGTTT 59.509 40.000 11.44 0.00 0.00 2.66
2382 4021 5.036916 TGGATCCATGGGTTAGAGTTAGTT 58.963 41.667 11.44 0.00 0.00 2.24
2383 4022 4.631234 TGGATCCATGGGTTAGAGTTAGT 58.369 43.478 11.44 0.00 0.00 2.24
2384 4023 5.615289 CTTGGATCCATGGGTTAGAGTTAG 58.385 45.833 17.06 0.63 0.00 2.34
2385 4024 4.141482 GCTTGGATCCATGGGTTAGAGTTA 60.141 45.833 24.74 2.14 0.00 2.24
2386 4025 3.372025 GCTTGGATCCATGGGTTAGAGTT 60.372 47.826 24.74 0.00 0.00 3.01
2387 4026 2.173569 GCTTGGATCCATGGGTTAGAGT 59.826 50.000 24.74 0.00 0.00 3.24
2388 4027 2.173356 TGCTTGGATCCATGGGTTAGAG 59.827 50.000 24.74 14.08 0.00 2.43
2389 4028 2.173356 CTGCTTGGATCCATGGGTTAGA 59.827 50.000 24.74 4.23 0.00 2.10
2390 4029 2.173356 TCTGCTTGGATCCATGGGTTAG 59.827 50.000 24.74 15.39 0.00 2.34
2391 4030 2.173356 CTCTGCTTGGATCCATGGGTTA 59.827 50.000 24.74 5.64 0.00 2.85
2392 4031 1.002069 TCTGCTTGGATCCATGGGTT 58.998 50.000 24.74 0.00 0.00 4.11
2393 4032 0.549950 CTCTGCTTGGATCCATGGGT 59.450 55.000 24.74 3.70 0.00 4.51
2394 4033 0.822532 GCTCTGCTTGGATCCATGGG 60.823 60.000 24.74 15.22 0.00 4.00
2395 4034 0.822532 GGCTCTGCTTGGATCCATGG 60.823 60.000 24.74 17.39 0.00 3.66
2396 4035 0.106868 TGGCTCTGCTTGGATCCATG 60.107 55.000 17.06 19.20 0.00 3.66
2397 4036 0.627451 TTGGCTCTGCTTGGATCCAT 59.373 50.000 17.06 0.00 32.52 3.41
2398 4037 0.627451 ATTGGCTCTGCTTGGATCCA 59.373 50.000 11.44 11.44 30.77 3.41
2399 4038 2.645838 TATTGGCTCTGCTTGGATCC 57.354 50.000 4.20 4.20 0.00 3.36
2400 4039 4.676546 GTTTTATTGGCTCTGCTTGGATC 58.323 43.478 0.00 0.00 0.00 3.36
2401 4040 3.129287 CGTTTTATTGGCTCTGCTTGGAT 59.871 43.478 0.00 0.00 0.00 3.41
2402 4041 2.487762 CGTTTTATTGGCTCTGCTTGGA 59.512 45.455 0.00 0.00 0.00 3.53
2403 4042 2.487762 TCGTTTTATTGGCTCTGCTTGG 59.512 45.455 0.00 0.00 0.00 3.61
2404 4043 3.426695 CCTCGTTTTATTGGCTCTGCTTG 60.427 47.826 0.00 0.00 0.00 4.01
2405 4044 2.749621 CCTCGTTTTATTGGCTCTGCTT 59.250 45.455 0.00 0.00 0.00 3.91
2406 4045 2.359900 CCTCGTTTTATTGGCTCTGCT 58.640 47.619 0.00 0.00 0.00 4.24
2407 4046 1.401905 CCCTCGTTTTATTGGCTCTGC 59.598 52.381 0.00 0.00 0.00 4.26
2408 4047 2.017049 CCCCTCGTTTTATTGGCTCTG 58.983 52.381 0.00 0.00 0.00 3.35
2409 4048 1.633945 ACCCCTCGTTTTATTGGCTCT 59.366 47.619 0.00 0.00 0.00 4.09
2410 4049 1.743394 CACCCCTCGTTTTATTGGCTC 59.257 52.381 0.00 0.00 0.00 4.70
2411 4050 1.615919 CCACCCCTCGTTTTATTGGCT 60.616 52.381 0.00 0.00 0.00 4.75
2412 4051 0.815095 CCACCCCTCGTTTTATTGGC 59.185 55.000 0.00 0.00 0.00 4.52
2413 4052 1.272258 ACCCACCCCTCGTTTTATTGG 60.272 52.381 0.00 0.00 0.00 3.16
2414 4053 2.209690 ACCCACCCCTCGTTTTATTG 57.790 50.000 0.00 0.00 0.00 1.90
2415 4054 2.984435 AACCCACCCCTCGTTTTATT 57.016 45.000 0.00 0.00 0.00 1.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.