Multiple sequence alignment - TraesCS1B01G391800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G391800 chr1B 100.000 4482 0 0 1 4482 624880176 624884657 0.000000e+00 8277.0
1 TraesCS1B01G391800 chr1B 100.000 35 0 0 3622 3656 624883764 624883798 1.040000e-06 65.8
2 TraesCS1B01G391800 chr1B 100.000 35 0 0 3589 3623 624883797 624883831 1.040000e-06 65.8
3 TraesCS1B01G391800 chr1D 95.300 2000 67 10 1925 3917 454568544 454566565 0.000000e+00 3147.0
4 TraesCS1B01G391800 chr1D 90.668 1811 78 28 1 1798 454570275 454568543 0.000000e+00 2324.0
5 TraesCS1B01G391800 chr1D 86.333 300 19 10 3919 4204 454566470 454566179 1.570000e-79 307.0
6 TraesCS1B01G391800 chr1D 88.333 120 9 1 1794 1913 495227001 495227115 6.050000e-29 139.0
7 TraesCS1B01G391800 chr1D 100.000 35 0 0 3589 3623 454566852 454566818 1.040000e-06 65.8
8 TraesCS1B01G391800 chr1A 94.773 1741 62 11 2186 3917 548672066 548673786 0.000000e+00 2684.0
9 TraesCS1B01G391800 chr1A 92.431 938 38 16 867 1801 548669745 548670652 0.000000e+00 1308.0
10 TraesCS1B01G391800 chr1A 92.157 255 17 2 1901 2155 548670649 548670900 1.530000e-94 357.0
11 TraesCS1B01G391800 chr1A 88.550 262 24 4 426 683 548668217 548668476 3.370000e-81 313.0
12 TraesCS1B01G391800 chr1A 92.135 178 14 0 264 441 548667393 548667570 7.440000e-63 252.0
13 TraesCS1B01G391800 chr1A 93.750 96 3 3 1845 1938 251345868 251345774 1.680000e-29 141.0
14 TraesCS1B01G391800 chr1A 92.553 94 6 1 171 264 548667383 548667291 2.810000e-27 134.0
15 TraesCS1B01G391800 chr1A 93.182 88 5 1 3914 4000 548673888 548673975 1.310000e-25 128.0
16 TraesCS1B01G391800 chr1A 79.878 164 22 8 1065 1227 134823441 134823594 4.740000e-20 110.0
17 TraesCS1B01G391800 chr1A 100.000 39 0 0 2151 2189 548671021 548671059 6.220000e-09 73.1
18 TraesCS1B01G391800 chr1A 100.000 35 0 0 3589 3623 548673483 548673517 1.040000e-06 65.8
19 TraesCS1B01G391800 chr7D 91.246 594 42 7 1052 1645 180439547 180440130 0.000000e+00 800.0
20 TraesCS1B01G391800 chr7D 89.474 152 8 7 1778 1926 497031502 497031648 7.660000e-43 185.0
21 TraesCS1B01G391800 chr7D 83.436 163 17 5 1065 1227 35867711 35867863 4.670000e-30 143.0
22 TraesCS1B01G391800 chr7D 79.394 165 21 8 1292 1453 35868818 35868972 2.210000e-18 104.0
23 TraesCS1B01G391800 chr7D 88.506 87 9 1 351 437 504756249 504756164 2.210000e-18 104.0
24 TraesCS1B01G391800 chr3D 90.924 595 41 7 1052 1645 86081482 86080900 0.000000e+00 787.0
25 TraesCS1B01G391800 chr3D 81.416 226 34 8 485 707 138793606 138793826 1.280000e-40 178.0
26 TraesCS1B01G391800 chr3D 95.506 89 4 0 1845 1933 605264258 605264170 4.670000e-30 143.0
27 TraesCS1B01G391800 chr3D 76.636 214 36 10 2463 2672 361384989 361385192 6.130000e-19 106.0
28 TraesCS1B01G391800 chr3A 90.556 593 46 6 1053 1645 703853646 703853064 0.000000e+00 776.0
29 TraesCS1B01G391800 chr3A 73.315 371 71 21 2463 2820 481890201 481890556 1.320000e-20 111.0
30 TraesCS1B01G391800 chr6D 90.372 592 47 7 1054 1645 150886752 150886171 0.000000e+00 769.0
31 TraesCS1B01G391800 chr3B 89.447 597 51 6 1050 1645 702151966 702151381 0.000000e+00 743.0
32 TraesCS1B01G391800 chr3B 85.000 400 44 15 2534 2931 549423208 549423593 4.200000e-105 392.0
33 TraesCS1B01G391800 chr3B 78.867 459 51 33 1369 1798 214271591 214271150 7.390000e-68 268.0
34 TraesCS1B01G391800 chr3B 81.752 137 20 1 1797 1933 51763230 51763099 4.740000e-20 110.0
35 TraesCS1B01G391800 chr3B 76.852 216 32 12 2463 2672 471248285 471248488 6.130000e-19 106.0
36 TraesCS1B01G391800 chr3B 84.000 100 16 0 484 583 46790025 46789926 3.690000e-16 97.1
37 TraesCS1B01G391800 chr7B 89.394 594 53 6 1052 1645 30075501 30074918 0.000000e+00 739.0
38 TraesCS1B01G391800 chr7B 79.286 140 14 14 1798 1932 725999464 725999593 2.870000e-12 84.2
39 TraesCS1B01G391800 chr5A 89.358 592 51 7 1054 1645 667547705 667548284 0.000000e+00 734.0
40 TraesCS1B01G391800 chr5A 92.174 115 8 1 1812 1926 528112575 528112462 1.290000e-35 161.0
41 TraesCS1B01G391800 chr4A 89.153 590 54 7 1056 1645 644923916 644923337 0.000000e+00 726.0
42 TraesCS1B01G391800 chr4A 79.186 221 43 3 488 707 547310567 547310349 2.790000e-32 150.0
43 TraesCS1B01G391800 chr2D 79.483 580 69 31 1249 1798 8397884 8398443 2.550000e-97 366.0
44 TraesCS1B01G391800 chr2D 80.455 220 41 2 484 702 527006752 527006534 2.770000e-37 167.0
45 TraesCS1B01G391800 chr5B 79.694 458 48 31 1369 1798 524541404 524540964 5.670000e-74 289.0
46 TraesCS1B01G391800 chr5B 76.211 227 48 4 480 703 424366948 424367171 1.020000e-21 115.0
47 TraesCS1B01G391800 chr5B 79.141 163 12 7 1065 1227 524546608 524546468 4.770000e-15 93.5
48 TraesCS1B01G391800 chr7A 89.109 202 18 4 1567 1768 16601578 16601775 9.630000e-62 248.0
49 TraesCS1B01G391800 chr7A 87.288 118 10 5 1845 1961 178029834 178029721 3.640000e-26 130.0
50 TraesCS1B01G391800 chr7A 77.434 226 37 7 485 698 169019659 169019882 6.090000e-24 122.0
51 TraesCS1B01G391800 chr6A 83.857 223 32 4 1576 1798 119188946 119188728 4.540000e-50 209.0
52 TraesCS1B01G391800 chr6A 79.221 308 46 11 1249 1554 119189289 119188998 9.830000e-47 198.0
53 TraesCS1B01G391800 chr6A 82.249 169 21 5 1059 1227 468252625 468252784 2.170000e-28 137.0
54 TraesCS1B01G391800 chr5D 82.326 215 35 3 490 702 233458659 233458446 2.750000e-42 183.0
55 TraesCS1B01G391800 chr5D 85.401 137 10 7 1792 1926 548234337 548234465 2.810000e-27 134.0
56 TraesCS1B01G391800 chr5D 83.212 137 12 10 1796 1930 548234466 548234339 1.020000e-21 115.0
57 TraesCS1B01G391800 chr4D 94.505 91 5 0 1845 1935 490940125 490940035 1.680000e-29 141.0
58 TraesCS1B01G391800 chr4B 77.828 221 43 5 486 703 115535275 115535058 1.010000e-26 132.0
59 TraesCS1B01G391800 chr2A 87.179 117 10 1 1797 1913 2929584 2929473 1.310000e-25 128.0
60 TraesCS1B01G391800 chr2A 80.597 134 12 10 1796 1926 14817921 14818043 1.720000e-14 91.6
61 TraesCS1B01G391800 chr2B 88.421 95 11 0 34 128 98603244 98603338 1.020000e-21 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G391800 chr1B 624880176 624884657 4481 False 2802.866667 8277 100.00000 1 4482 3 chr1B.!!$F1 4481
1 TraesCS1B01G391800 chr1D 454566179 454570275 4096 True 1460.950000 3147 93.07525 1 4204 4 chr1D.!!$R1 4203
2 TraesCS1B01G391800 chr1A 548667393 548673975 6582 False 647.612500 2684 94.15350 264 4000 8 chr1A.!!$F2 3736
3 TraesCS1B01G391800 chr7D 180439547 180440130 583 False 800.000000 800 91.24600 1052 1645 1 chr7D.!!$F1 593
4 TraesCS1B01G391800 chr3D 86080900 86081482 582 True 787.000000 787 90.92400 1052 1645 1 chr3D.!!$R1 593
5 TraesCS1B01G391800 chr3A 703853064 703853646 582 True 776.000000 776 90.55600 1053 1645 1 chr3A.!!$R1 592
6 TraesCS1B01G391800 chr6D 150886171 150886752 581 True 769.000000 769 90.37200 1054 1645 1 chr6D.!!$R1 591
7 TraesCS1B01G391800 chr3B 702151381 702151966 585 True 743.000000 743 89.44700 1050 1645 1 chr3B.!!$R4 595
8 TraesCS1B01G391800 chr7B 30074918 30075501 583 True 739.000000 739 89.39400 1052 1645 1 chr7B.!!$R1 593
9 TraesCS1B01G391800 chr5A 667547705 667548284 579 False 734.000000 734 89.35800 1054 1645 1 chr5A.!!$F1 591
10 TraesCS1B01G391800 chr4A 644923337 644923916 579 True 726.000000 726 89.15300 1056 1645 1 chr4A.!!$R2 589
11 TraesCS1B01G391800 chr2D 8397884 8398443 559 False 366.000000 366 79.48300 1249 1798 1 chr2D.!!$F1 549
12 TraesCS1B01G391800 chr6A 119188728 119189289 561 True 203.500000 209 81.53900 1249 1798 2 chr6A.!!$R1 549

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
904 2730 1.133513 CAGCCCAATACCCAATAGGCA 60.134 52.381 1.21 0.0 38.88 4.75 F
1926 3815 1.732117 TTTTGGGACGGAGGGAGTAA 58.268 50.000 0.00 0.0 0.00 2.24 F
2014 3903 0.820871 TTGTGTTTTCCGGCAGCTTT 59.179 45.000 0.00 0.0 0.00 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1934 3823 0.602638 TAGCTTGTTGCAGTGGTCCG 60.603 55.0 0.0 0.0 45.94 4.79 R
3444 6468 0.741915 TTCAACGTTTTCAGGTGGCC 59.258 50.0 0.0 0.0 0.00 5.36 R
4006 7146 0.401738 CTCTGAACCAAAGGAGCCCA 59.598 55.0 0.0 0.0 0.00 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 3.385755 ACAAAGAGGCTTGAACTTGCATT 59.614 39.130 0.00 0.00 0.00 3.56
56 57 2.869233 TGAACTTGTGGCTTCTTTGC 57.131 45.000 0.00 0.00 0.00 3.68
86 87 4.735578 GCAAACATCATGGGAAGCATGTAG 60.736 45.833 0.00 0.00 0.00 2.74
143 144 9.569122 AAGCTTCTAAACCTTACATTACAAAGA 57.431 29.630 0.00 0.00 0.00 2.52
393 394 4.083110 ACACTTGACATAGCAAGAACATGC 60.083 41.667 10.71 0.00 46.31 4.06
399 400 4.447365 GCAAGAACATGCGAGTGC 57.553 55.556 0.00 0.00 43.20 4.40
457 1120 3.697619 AACCACTTGGGCTAAGAGTAC 57.302 47.619 18.10 0.00 42.05 2.73
459 1122 3.182152 ACCACTTGGGCTAAGAGTACAT 58.818 45.455 18.10 0.00 42.05 2.29
464 1127 6.828785 CCACTTGGGCTAAGAGTACATATTTT 59.171 38.462 18.10 0.00 39.76 1.82
543 1208 7.777095 TGTTAAGTTAGGCAAGTTTTGTCAAT 58.223 30.769 0.00 0.00 37.85 2.57
586 1251 3.897505 AGCCACACCTAAAGCAAAAATCT 59.102 39.130 0.00 0.00 0.00 2.40
587 1252 4.344968 AGCCACACCTAAAGCAAAAATCTT 59.655 37.500 0.00 0.00 0.00 2.40
620 1285 2.425143 AAGCCCCACATGTCATACAG 57.575 50.000 0.00 0.00 0.00 2.74
656 1322 2.273449 CTCCCGAGGCAAGCCAAT 59.727 61.111 14.40 0.00 38.92 3.16
683 1349 5.064834 GTGGCTAACTATTTGAGCACCTAAC 59.935 44.000 0.00 0.00 37.98 2.34
709 2527 6.935741 AAAGCAAGTGTGACAAACATAGTA 57.064 33.333 0.00 0.00 41.97 1.82
714 2532 7.391554 AGCAAGTGTGACAAACATAGTATGATT 59.608 33.333 17.13 8.45 41.97 2.57
715 2533 8.023128 GCAAGTGTGACAAACATAGTATGATTT 58.977 33.333 17.13 10.19 41.97 2.17
716 2534 9.897744 CAAGTGTGACAAACATAGTATGATTTT 57.102 29.630 17.13 4.38 41.97 1.82
738 2556 6.642707 TTTTTGAGGGGTAAACATAGTGTG 57.357 37.500 0.00 0.00 0.00 3.82
739 2557 5.570205 TTTGAGGGGTAAACATAGTGTGA 57.430 39.130 0.00 0.00 0.00 3.58
740 2558 5.772393 TTGAGGGGTAAACATAGTGTGAT 57.228 39.130 0.00 0.00 0.00 3.06
741 2559 6.877668 TTGAGGGGTAAACATAGTGTGATA 57.122 37.500 0.00 0.00 0.00 2.15
742 2560 6.877668 TGAGGGGTAAACATAGTGTGATAA 57.122 37.500 0.00 0.00 0.00 1.75
743 2561 6.884832 TGAGGGGTAAACATAGTGTGATAAG 58.115 40.000 0.00 0.00 0.00 1.73
749 2567 6.816640 GGTAAACATAGTGTGATAAGCTGTGA 59.183 38.462 0.00 0.00 0.00 3.58
756 2574 6.639632 AGTGTGATAAGCTGTGACAAAATT 57.360 33.333 0.00 0.00 0.00 1.82
904 2730 1.133513 CAGCCCAATACCCAATAGGCA 60.134 52.381 1.21 0.00 38.88 4.75
1100 2926 3.969250 GAAGCATGGGGGCGAACGA 62.969 63.158 0.00 0.00 39.27 3.85
1109 2935 2.125793 GGCGAACGACCCCACTAC 60.126 66.667 0.00 0.00 0.00 2.73
1265 3091 4.845580 ATTCCGGCGCTCCAGCTG 62.846 66.667 7.64 6.78 42.86 4.24
1290 3116 2.356135 GATCCCGCTTTGCTTGTCTTA 58.644 47.619 0.00 0.00 0.00 2.10
1300 3126 5.334491 GCTTTGCTTGTCTTAGAAGGAACTC 60.334 44.000 0.00 0.00 38.49 3.01
1367 3194 8.789762 TCATGATGCAATTCATAAATCCTACTG 58.210 33.333 2.53 0.00 34.59 2.74
1385 3215 8.008513 TCCTACTGGTAGTTGCTAGAAATTAG 57.991 38.462 0.00 0.00 34.23 1.73
1413 3243 9.476202 ACAATTTTCTGAAGCCATTTTAACTAC 57.524 29.630 0.00 0.00 0.00 2.73
1502 3335 6.266786 CAGGGTAAAGGTGTTATCTTTTTGGT 59.733 38.462 0.00 0.00 36.12 3.67
1503 3336 6.842280 AGGGTAAAGGTGTTATCTTTTTGGTT 59.158 34.615 0.00 0.00 36.12 3.67
1504 3337 6.926826 GGGTAAAGGTGTTATCTTTTTGGTTG 59.073 38.462 0.00 0.00 36.12 3.77
1505 3338 6.422701 GGTAAAGGTGTTATCTTTTTGGTTGC 59.577 38.462 0.00 0.00 36.12 4.17
1547 3380 2.294074 TGGCTTTCAGTTAACTGCGTT 58.706 42.857 27.49 0.00 43.46 4.84
1638 3502 7.643569 TGGTAATCATTCTGTTGTTGCATAT 57.356 32.000 0.00 0.00 0.00 1.78
1760 3624 9.195411 CACACATAAAGCTTGTTGATTTACAAT 57.805 29.630 14.07 0.00 39.02 2.71
1771 3635 6.176896 TGTTGATTTACAATAGGTGCAGCTA 58.823 36.000 26.55 26.55 40.76 3.32
1775 3639 8.549289 TTGATTTACAATAGGTGCAGCTATGCA 61.549 37.037 32.88 20.27 45.84 3.96
1798 3687 9.529325 TGCAGTAGTTGTACATTTGAGATATAC 57.471 33.333 0.00 0.00 0.00 1.47
1802 3691 9.694137 GTAGTTGTACATTTGAGATATACTCCC 57.306 37.037 0.00 0.00 44.34 4.30
1804 3693 8.643324 AGTTGTACATTTGAGATATACTCCCTC 58.357 37.037 0.00 0.00 44.34 4.30
1805 3694 7.540474 TGTACATTTGAGATATACTCCCTCC 57.460 40.000 0.00 0.00 44.34 4.30
1806 3695 7.073208 TGTACATTTGAGATATACTCCCTCCA 58.927 38.462 0.00 0.00 44.34 3.86
1808 3697 7.251321 ACATTTGAGATATACTCCCTCCATC 57.749 40.000 0.00 0.00 44.34 3.51
1809 3698 6.214412 ACATTTGAGATATACTCCCTCCATCC 59.786 42.308 0.00 0.00 44.34 3.51
1810 3699 4.338795 TGAGATATACTCCCTCCATCCC 57.661 50.000 0.00 0.00 44.34 3.85
1811 3700 3.667614 TGAGATATACTCCCTCCATCCCA 59.332 47.826 0.00 0.00 44.34 4.37
1812 3701 4.109600 TGAGATATACTCCCTCCATCCCAA 59.890 45.833 0.00 0.00 44.34 4.12
1813 3702 5.094387 GAGATATACTCCCTCCATCCCAAA 58.906 45.833 0.00 0.00 39.53 3.28
1814 3703 5.486332 AGATATACTCCCTCCATCCCAAAA 58.514 41.667 0.00 0.00 0.00 2.44
1815 3704 6.101223 AGATATACTCCCTCCATCCCAAAAT 58.899 40.000 0.00 0.00 0.00 1.82
1816 3705 7.263901 AGATATACTCCCTCCATCCCAAAATA 58.736 38.462 0.00 0.00 0.00 1.40
1817 3706 7.744068 AGATATACTCCCTCCATCCCAAAATAA 59.256 37.037 0.00 0.00 0.00 1.40
1818 3707 4.526438 ACTCCCTCCATCCCAAAATAAG 57.474 45.455 0.00 0.00 0.00 1.73
1819 3708 3.858638 ACTCCCTCCATCCCAAAATAAGT 59.141 43.478 0.00 0.00 0.00 2.24
1820 3709 4.210331 CTCCCTCCATCCCAAAATAAGTG 58.790 47.826 0.00 0.00 0.00 3.16
1821 3710 3.596046 TCCCTCCATCCCAAAATAAGTGT 59.404 43.478 0.00 0.00 0.00 3.55
1822 3711 3.954258 CCCTCCATCCCAAAATAAGTGTC 59.046 47.826 0.00 0.00 0.00 3.67
1823 3712 4.325344 CCCTCCATCCCAAAATAAGTGTCT 60.325 45.833 0.00 0.00 0.00 3.41
1824 3713 4.884164 CCTCCATCCCAAAATAAGTGTCTC 59.116 45.833 0.00 0.00 0.00 3.36
1825 3714 5.500234 CTCCATCCCAAAATAAGTGTCTCA 58.500 41.667 0.00 0.00 0.00 3.27
1826 3715 5.886609 TCCATCCCAAAATAAGTGTCTCAA 58.113 37.500 0.00 0.00 0.00 3.02
1827 3716 5.710099 TCCATCCCAAAATAAGTGTCTCAAC 59.290 40.000 0.00 0.00 0.00 3.18
1828 3717 5.105756 CCATCCCAAAATAAGTGTCTCAACC 60.106 44.000 0.00 0.00 0.00 3.77
1829 3718 5.319043 TCCCAAAATAAGTGTCTCAACCT 57.681 39.130 0.00 0.00 0.00 3.50
1830 3719 5.701224 TCCCAAAATAAGTGTCTCAACCTT 58.299 37.500 0.00 0.00 0.00 3.50
1831 3720 6.843752 TCCCAAAATAAGTGTCTCAACCTTA 58.156 36.000 0.00 0.00 0.00 2.69
1832 3721 6.940298 TCCCAAAATAAGTGTCTCAACCTTAG 59.060 38.462 0.00 0.00 0.00 2.18
1833 3722 6.715264 CCCAAAATAAGTGTCTCAACCTTAGT 59.285 38.462 0.00 0.00 0.00 2.24
1834 3723 7.881232 CCCAAAATAAGTGTCTCAACCTTAGTA 59.119 37.037 0.00 0.00 0.00 1.82
1835 3724 8.718734 CCAAAATAAGTGTCTCAACCTTAGTAC 58.281 37.037 0.00 0.00 0.00 2.73
1836 3725 9.268268 CAAAATAAGTGTCTCAACCTTAGTACA 57.732 33.333 0.00 0.00 0.00 2.90
1837 3726 9.841295 AAAATAAGTGTCTCAACCTTAGTACAA 57.159 29.630 0.00 0.00 0.00 2.41
1838 3727 8.828688 AATAAGTGTCTCAACCTTAGTACAAC 57.171 34.615 0.00 0.00 0.00 3.32
1839 3728 6.481434 AAGTGTCTCAACCTTAGTACAACT 57.519 37.500 0.00 0.00 0.00 3.16
1840 3729 6.481434 AGTGTCTCAACCTTAGTACAACTT 57.519 37.500 0.00 0.00 0.00 2.66
1841 3730 6.885922 AGTGTCTCAACCTTAGTACAACTTT 58.114 36.000 0.00 0.00 0.00 2.66
1842 3731 6.761714 AGTGTCTCAACCTTAGTACAACTTTG 59.238 38.462 0.00 0.00 0.00 2.77
1843 3732 6.537660 GTGTCTCAACCTTAGTACAACTTTGT 59.462 38.462 0.00 0.00 44.86 2.83
1844 3733 7.707893 GTGTCTCAACCTTAGTACAACTTTGTA 59.292 37.037 0.00 0.00 42.35 2.41
1845 3734 8.259411 TGTCTCAACCTTAGTACAACTTTGTAA 58.741 33.333 3.38 0.00 44.46 2.41
1846 3735 9.101655 GTCTCAACCTTAGTACAACTTTGTAAA 57.898 33.333 3.38 0.00 44.46 2.01
1847 3736 9.669887 TCTCAACCTTAGTACAACTTTGTAAAA 57.330 29.630 3.38 1.78 44.46 1.52
1872 3761 9.780186 AATAAGTTTCTCAAGCTTAGTACAACT 57.220 29.630 0.00 1.61 0.00 3.16
1873 3762 9.780186 ATAAGTTTCTCAAGCTTAGTACAACTT 57.220 29.630 18.97 18.97 36.28 2.66
1874 3763 8.507524 AAGTTTCTCAAGCTTAGTACAACTTT 57.492 30.769 0.00 0.00 29.71 2.66
1875 3764 7.920738 AGTTTCTCAAGCTTAGTACAACTTTG 58.079 34.615 0.00 0.00 0.00 2.77
1876 3765 7.553044 AGTTTCTCAAGCTTAGTACAACTTTGT 59.447 33.333 0.00 0.00 44.86 2.83
1877 3766 8.823818 GTTTCTCAAGCTTAGTACAACTTTGTA 58.176 33.333 0.00 0.00 42.35 2.41
1902 3791 7.934457 ACTAAAGTTAGTACAAAGTCGAGACA 58.066 34.615 5.99 0.00 41.92 3.41
1903 3792 7.859875 ACTAAAGTTAGTACAAAGTCGAGACAC 59.140 37.037 5.99 0.00 41.92 3.67
1904 3793 6.388435 AAGTTAGTACAAAGTCGAGACACT 57.612 37.500 5.99 2.70 0.00 3.55
1905 3794 6.388435 AGTTAGTACAAAGTCGAGACACTT 57.612 37.500 5.99 0.00 38.30 3.16
1906 3795 7.502120 AGTTAGTACAAAGTCGAGACACTTA 57.498 36.000 5.99 0.00 35.45 2.24
1907 3796 8.108551 AGTTAGTACAAAGTCGAGACACTTAT 57.891 34.615 5.99 0.00 35.45 1.73
1908 3797 8.574737 AGTTAGTACAAAGTCGAGACACTTATT 58.425 33.333 5.99 0.00 35.45 1.40
1909 3798 9.189723 GTTAGTACAAAGTCGAGACACTTATTT 57.810 33.333 5.99 0.00 35.45 1.40
1910 3799 9.754382 TTAGTACAAAGTCGAGACACTTATTTT 57.246 29.630 5.99 0.00 35.45 1.82
1911 3800 8.073355 AGTACAAAGTCGAGACACTTATTTTG 57.927 34.615 5.99 8.46 35.45 2.44
1912 3801 6.300354 ACAAAGTCGAGACACTTATTTTGG 57.700 37.500 5.99 0.00 35.45 3.28
1913 3802 5.238650 ACAAAGTCGAGACACTTATTTTGGG 59.761 40.000 5.99 0.00 35.45 4.12
1914 3803 4.884668 AGTCGAGACACTTATTTTGGGA 57.115 40.909 5.99 0.00 0.00 4.37
1915 3804 4.566987 AGTCGAGACACTTATTTTGGGAC 58.433 43.478 5.99 0.00 0.00 4.46
1916 3805 3.367025 GTCGAGACACTTATTTTGGGACG 59.633 47.826 0.00 0.00 0.00 4.79
1917 3806 2.671396 CGAGACACTTATTTTGGGACGG 59.329 50.000 0.00 0.00 0.00 4.79
1918 3807 3.615592 CGAGACACTTATTTTGGGACGGA 60.616 47.826 0.00 0.00 0.00 4.69
1919 3808 3.933332 GAGACACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
1920 3809 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
1921 3810 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
1922 3811 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
1923 3812 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
1924 3813 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
1925 3814 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
1926 3815 1.732117 TTTTGGGACGGAGGGAGTAA 58.268 50.000 0.00 0.00 0.00 2.24
1927 3816 1.961133 TTTGGGACGGAGGGAGTAAT 58.039 50.000 0.00 0.00 0.00 1.89
1928 3817 1.961133 TTGGGACGGAGGGAGTAATT 58.039 50.000 0.00 0.00 0.00 1.40
1929 3818 1.961133 TGGGACGGAGGGAGTAATTT 58.039 50.000 0.00 0.00 0.00 1.82
1930 3819 3.119009 TGGGACGGAGGGAGTAATTTA 57.881 47.619 0.00 0.00 0.00 1.40
1931 3820 3.660959 TGGGACGGAGGGAGTAATTTAT 58.339 45.455 0.00 0.00 0.00 1.40
1932 3821 4.818447 TGGGACGGAGGGAGTAATTTATA 58.182 43.478 0.00 0.00 0.00 0.98
1933 3822 5.218179 TGGGACGGAGGGAGTAATTTATAA 58.782 41.667 0.00 0.00 0.00 0.98
1934 3823 5.070847 TGGGACGGAGGGAGTAATTTATAAC 59.929 44.000 0.00 0.00 0.00 1.89
1935 3824 5.225642 GGACGGAGGGAGTAATTTATAACG 58.774 45.833 0.00 0.00 0.00 3.18
2014 3903 0.820871 TTGTGTTTTCCGGCAGCTTT 59.179 45.000 0.00 0.00 0.00 3.51
2046 3935 8.850156 ACTTTGCTAATTGTTCACATAAAGAGT 58.150 29.630 0.00 0.00 0.00 3.24
2220 5244 5.920273 GTGAACTGTTAACCCATCATTTGTG 59.080 40.000 2.48 0.00 0.00 3.33
2231 5255 3.758023 CCATCATTTGTGGTTGCACTCTA 59.242 43.478 0.00 0.00 31.96 2.43
2255 5279 7.623268 ATTTTTGAGAAAAACGATTCCTTCG 57.377 32.000 0.00 0.00 42.57 3.79
2291 5315 7.497909 TGCACTAGGCTTATATCTTTGGTTAAC 59.502 37.037 0.00 0.00 45.15 2.01
2320 5344 8.924303 ACTGTAAGAAGTATCTACATGCCAATA 58.076 33.333 0.00 0.00 37.43 1.90
2444 5468 2.228582 CCTGAAACGGCATTGTTGATCA 59.771 45.455 0.00 0.00 31.10 2.92
2572 5596 6.857777 AATAATGCAGCTTCAGATCACTAC 57.142 37.500 0.00 0.00 0.00 2.73
2846 5870 1.668826 AACCTGTTCCCATCCTGCTA 58.331 50.000 0.00 0.00 0.00 3.49
2854 5878 0.886490 CCCATCCTGCTATGTTCCGC 60.886 60.000 0.00 0.00 0.00 5.54
2870 5894 3.546002 TCCGCGGTTCTTTGTTATTTG 57.454 42.857 27.15 0.00 0.00 2.32
2885 5909 9.777843 CTTTGTTATTTGTTCTTAATCGTTTGC 57.222 29.630 0.00 0.00 0.00 3.68
3004 6028 4.749245 ATGTCAAACGATCGCTTCTTTT 57.251 36.364 16.60 4.84 0.00 2.27
3008 6032 5.235616 TGTCAAACGATCGCTTCTTTTAACT 59.764 36.000 16.60 0.00 0.00 2.24
3058 6082 7.521669 TGAAAATACAAATCCCCCAAATGTTT 58.478 30.769 0.00 0.00 0.00 2.83
3288 6312 4.019858 TGACTAGCTGAAGCACTATGTCT 58.980 43.478 4.90 0.00 45.16 3.41
3300 6324 7.875554 TGAAGCACTATGTCTATGTGTACAAAA 59.124 33.333 0.00 0.00 34.52 2.44
3424 6448 1.865865 TCAACAAGAGTGCGACCTTC 58.134 50.000 0.00 0.00 0.00 3.46
3444 6468 0.946221 GTGAACACTCCAGCTCCACG 60.946 60.000 0.00 0.00 0.00 4.94
3491 6515 6.548441 TGAAAATAACCTGACCGTAAACAG 57.452 37.500 0.00 0.00 0.00 3.16
3497 6521 2.227968 CTGACCGTAAACAGCGCTGC 62.228 60.000 36.28 19.25 0.00 5.25
3571 6595 2.072298 AGCTGCAGAAACTAGAAAGCG 58.928 47.619 20.43 0.00 34.43 4.68
3581 6605 1.348036 ACTAGAAAGCGCAAAGGACCT 59.652 47.619 11.47 0.00 0.00 3.85
3684 6708 2.267351 CCAATGGAGCGCACACCAA 61.267 57.895 20.85 8.37 40.16 3.67
3703 6732 5.065988 CACCAAAGCTTGTAACAGTTGTACT 59.934 40.000 0.00 0.00 0.00 2.73
3782 6812 3.063510 TGTTCCAAGCAGATCTCCTTG 57.936 47.619 18.07 18.07 38.48 3.61
3783 6813 2.373169 TGTTCCAAGCAGATCTCCTTGT 59.627 45.455 22.11 0.00 37.36 3.16
3784 6814 2.746362 GTTCCAAGCAGATCTCCTTGTG 59.254 50.000 22.11 14.63 37.36 3.33
3995 7135 7.556733 AAATTGAACATTGTGTTTCTGCATT 57.443 28.000 0.00 0.00 41.28 3.56
4004 7144 9.275398 ACATTGTGTTTCTGCATTTGATATTTT 57.725 25.926 0.00 0.00 0.00 1.82
4033 7173 2.293399 CCTTTGGTTCAGAGGAAAACCG 59.707 50.000 0.00 0.00 46.49 4.44
4067 7207 6.726490 AGAGGATTTGATTTGGATCATTGG 57.274 37.500 0.00 0.00 41.71 3.16
4073 7213 9.181061 GGATTTGATTTGGATCATTGGAATTTT 57.819 29.630 0.00 0.00 41.71 1.82
4099 7240 1.476074 TGACGTCGTTTGGTTCGTAC 58.524 50.000 11.62 0.00 36.67 3.67
4103 7244 1.315571 CGTCGTTTGGTTCGTACGATC 59.684 52.381 20.27 18.01 44.81 3.69
4137 7278 4.444449 GGAACCTAAGGATTGGATTACGCT 60.444 45.833 0.00 0.00 0.00 5.07
4139 7280 5.211174 ACCTAAGGATTGGATTACGCTAC 57.789 43.478 0.00 0.00 0.00 3.58
4144 7285 4.510571 AGGATTGGATTACGCTACGTTTT 58.489 39.130 0.00 0.00 41.54 2.43
4145 7286 4.569564 AGGATTGGATTACGCTACGTTTTC 59.430 41.667 0.00 0.00 41.54 2.29
4146 7287 4.569564 GGATTGGATTACGCTACGTTTTCT 59.430 41.667 0.00 0.00 41.54 2.52
4148 7289 6.074463 GGATTGGATTACGCTACGTTTTCTAG 60.074 42.308 0.00 0.00 41.54 2.43
4159 7310 6.529125 CGCTACGTTTTCTAGTCCAATTCTTA 59.471 38.462 0.00 0.00 0.00 2.10
4162 7313 9.804758 CTACGTTTTCTAGTCCAATTCTTAGAT 57.195 33.333 0.00 0.00 0.00 1.98
4165 7316 9.974750 CGTTTTCTAGTCCAATTCTTAGATTTC 57.025 33.333 0.00 0.00 0.00 2.17
4209 7361 8.691661 TCCTGTAGAATTCAATAAAATAGCCC 57.308 34.615 8.44 0.00 0.00 5.19
4210 7362 8.278639 TCCTGTAGAATTCAATAAAATAGCCCA 58.721 33.333 8.44 0.00 0.00 5.36
4211 7363 8.912988 CCTGTAGAATTCAATAAAATAGCCCAA 58.087 33.333 8.44 0.00 0.00 4.12
4221 7373 8.349245 TCAATAAAATAGCCCAAATGATGTACG 58.651 33.333 0.00 0.00 0.00 3.67
4222 7374 4.568152 AAATAGCCCAAATGATGTACGC 57.432 40.909 0.00 0.00 0.00 4.42
4223 7375 1.577468 TAGCCCAAATGATGTACGCG 58.423 50.000 3.53 3.53 0.00 6.01
4224 7376 0.392461 AGCCCAAATGATGTACGCGT 60.392 50.000 19.17 19.17 0.00 6.01
4225 7377 0.248054 GCCCAAATGATGTACGCGTG 60.248 55.000 24.59 0.51 0.00 5.34
4226 7378 0.376852 CCCAAATGATGTACGCGTGG 59.623 55.000 24.59 11.01 0.00 4.94
4227 7379 0.248054 CCAAATGATGTACGCGTGGC 60.248 55.000 24.59 15.29 0.00 5.01
4228 7380 0.445829 CAAATGATGTACGCGTGGCA 59.554 50.000 24.59 20.68 0.00 4.92
4229 7381 0.446222 AAATGATGTACGCGTGGCAC 59.554 50.000 24.59 13.33 0.00 5.01
4230 7382 0.672091 AATGATGTACGCGTGGCACA 60.672 50.000 24.59 19.25 0.00 4.57
4231 7383 0.672091 ATGATGTACGCGTGGCACAA 60.672 50.000 24.59 12.44 44.16 3.33
4232 7384 0.880718 TGATGTACGCGTGGCACAAA 60.881 50.000 24.59 8.56 44.16 2.83
4233 7385 0.179225 GATGTACGCGTGGCACAAAG 60.179 55.000 24.59 10.25 44.16 2.77
4234 7386 0.882927 ATGTACGCGTGGCACAAAGT 60.883 50.000 24.59 15.47 44.16 2.66
4235 7387 0.249363 TGTACGCGTGGCACAAAGTA 60.249 50.000 24.59 14.48 44.16 2.24
4236 7388 0.860533 GTACGCGTGGCACAAAGTAA 59.139 50.000 24.59 0.00 44.16 2.24
4237 7389 0.860533 TACGCGTGGCACAAAGTAAC 59.139 50.000 24.59 0.00 44.16 2.50
4238 7390 1.090625 ACGCGTGGCACAAAGTAACA 61.091 50.000 12.93 0.00 44.16 2.41
4239 7391 0.656205 CGCGTGGCACAAAGTAACAC 60.656 55.000 19.09 0.00 44.16 3.32
4240 7392 0.317519 GCGTGGCACAAAGTAACACC 60.318 55.000 19.09 0.00 44.16 4.16
4241 7393 0.041663 CGTGGCACAAAGTAACACCG 60.042 55.000 19.09 0.00 44.16 4.94
4242 7394 0.317519 GTGGCACAAAGTAACACCGC 60.318 55.000 13.86 0.00 44.16 5.68
4243 7395 1.284715 GGCACAAAGTAACACCGCC 59.715 57.895 0.00 0.00 0.00 6.13
4244 7396 1.284715 GCACAAAGTAACACCGCCC 59.715 57.895 0.00 0.00 0.00 6.13
4245 7397 1.170290 GCACAAAGTAACACCGCCCT 61.170 55.000 0.00 0.00 0.00 5.19
4246 7398 0.591170 CACAAAGTAACACCGCCCTG 59.409 55.000 0.00 0.00 0.00 4.45
4247 7399 0.470766 ACAAAGTAACACCGCCCTGA 59.529 50.000 0.00 0.00 0.00 3.86
4248 7400 1.134037 ACAAAGTAACACCGCCCTGAA 60.134 47.619 0.00 0.00 0.00 3.02
4249 7401 1.265905 CAAAGTAACACCGCCCTGAAC 59.734 52.381 0.00 0.00 0.00 3.18
4250 7402 0.601841 AAGTAACACCGCCCTGAACG 60.602 55.000 0.00 0.00 0.00 3.95
4251 7403 1.301165 GTAACACCGCCCTGAACGT 60.301 57.895 0.00 0.00 0.00 3.99
4252 7404 0.881600 GTAACACCGCCCTGAACGTT 60.882 55.000 0.00 0.00 0.00 3.99
4253 7405 0.678395 TAACACCGCCCTGAACGTTA 59.322 50.000 0.00 0.00 0.00 3.18
4254 7406 0.601841 AACACCGCCCTGAACGTTAG 60.602 55.000 0.00 0.00 0.00 2.34
4255 7407 1.290955 CACCGCCCTGAACGTTAGA 59.709 57.895 0.00 0.00 0.00 2.10
4256 7408 0.320073 CACCGCCCTGAACGTTAGAA 60.320 55.000 0.00 0.00 0.00 2.10
4257 7409 0.611714 ACCGCCCTGAACGTTAGAAT 59.388 50.000 0.00 0.00 0.00 2.40
4258 7410 1.006832 CCGCCCTGAACGTTAGAATG 58.993 55.000 0.00 0.00 0.00 2.67
4259 7411 0.373716 CGCCCTGAACGTTAGAATGC 59.626 55.000 0.00 0.00 0.00 3.56
4260 7412 1.739067 GCCCTGAACGTTAGAATGCT 58.261 50.000 0.00 0.00 0.00 3.79
4261 7413 2.084546 GCCCTGAACGTTAGAATGCTT 58.915 47.619 0.00 0.00 0.00 3.91
4262 7414 2.096013 GCCCTGAACGTTAGAATGCTTC 59.904 50.000 0.00 0.00 0.00 3.86
4263 7415 2.348666 CCCTGAACGTTAGAATGCTTCG 59.651 50.000 0.00 0.00 34.02 3.79
4264 7416 2.993899 CCTGAACGTTAGAATGCTTCGT 59.006 45.455 0.00 0.00 35.92 3.85
4265 7417 3.432252 CCTGAACGTTAGAATGCTTCGTT 59.568 43.478 13.68 13.68 41.95 3.85
4266 7418 4.084013 CCTGAACGTTAGAATGCTTCGTTT 60.084 41.667 14.57 3.14 40.59 3.60
4267 7419 5.412526 TGAACGTTAGAATGCTTCGTTTT 57.587 34.783 14.57 0.00 40.59 2.43
4268 7420 5.812652 TGAACGTTAGAATGCTTCGTTTTT 58.187 33.333 14.57 0.00 40.59 1.94
4291 7443 7.765695 TTTTTCTATTCCTGTGCTTTGAGAT 57.234 32.000 0.00 0.00 0.00 2.75
4292 7444 7.765695 TTTTCTATTCCTGTGCTTTGAGATT 57.234 32.000 0.00 0.00 0.00 2.40
4293 7445 6.748333 TTCTATTCCTGTGCTTTGAGATTG 57.252 37.500 0.00 0.00 0.00 2.67
4294 7446 6.053632 TCTATTCCTGTGCTTTGAGATTGA 57.946 37.500 0.00 0.00 0.00 2.57
4295 7447 6.656902 TCTATTCCTGTGCTTTGAGATTGAT 58.343 36.000 0.00 0.00 0.00 2.57
4296 7448 5.578005 ATTCCTGTGCTTTGAGATTGATG 57.422 39.130 0.00 0.00 0.00 3.07
4297 7449 4.025040 TCCTGTGCTTTGAGATTGATGT 57.975 40.909 0.00 0.00 0.00 3.06
4298 7450 5.164620 TCCTGTGCTTTGAGATTGATGTA 57.835 39.130 0.00 0.00 0.00 2.29
4299 7451 5.181009 TCCTGTGCTTTGAGATTGATGTAG 58.819 41.667 0.00 0.00 0.00 2.74
4300 7452 5.046376 TCCTGTGCTTTGAGATTGATGTAGA 60.046 40.000 0.00 0.00 0.00 2.59
4301 7453 5.821470 CCTGTGCTTTGAGATTGATGTAGAT 59.179 40.000 0.00 0.00 0.00 1.98
4302 7454 6.018098 CCTGTGCTTTGAGATTGATGTAGATC 60.018 42.308 0.00 0.00 0.00 2.75
4303 7455 5.521372 TGTGCTTTGAGATTGATGTAGATCG 59.479 40.000 0.00 0.00 0.00 3.69
4304 7456 5.750547 GTGCTTTGAGATTGATGTAGATCGA 59.249 40.000 0.00 0.00 0.00 3.59
4305 7457 6.256539 GTGCTTTGAGATTGATGTAGATCGAA 59.743 38.462 0.00 0.00 0.00 3.71
4306 7458 6.818142 TGCTTTGAGATTGATGTAGATCGAAA 59.182 34.615 0.00 0.00 0.00 3.46
4307 7459 7.010830 TGCTTTGAGATTGATGTAGATCGAAAG 59.989 37.037 0.00 0.00 33.91 2.62
4324 7476 6.817765 TCGAAAGAGGATTTACAAATGCTT 57.182 33.333 9.66 0.00 45.40 3.91
4325 7477 6.611381 TCGAAAGAGGATTTACAAATGCTTG 58.389 36.000 9.66 0.69 45.40 4.01
4326 7478 6.429692 TCGAAAGAGGATTTACAAATGCTTGA 59.570 34.615 9.66 2.57 45.40 3.02
4327 7479 7.121168 TCGAAAGAGGATTTACAAATGCTTGAT 59.879 33.333 9.66 0.77 45.40 2.57
4328 7480 7.219535 CGAAAGAGGATTTACAAATGCTTGATG 59.780 37.037 9.66 0.00 45.40 3.07
4329 7481 6.461110 AGAGGATTTACAAATGCTTGATGG 57.539 37.500 9.66 0.00 45.40 3.51
4330 7482 6.189859 AGAGGATTTACAAATGCTTGATGGA 58.810 36.000 9.66 0.00 45.40 3.41
4331 7483 6.096001 AGAGGATTTACAAATGCTTGATGGAC 59.904 38.462 9.66 0.00 45.40 4.02
4332 7484 5.954150 AGGATTTACAAATGCTTGATGGACT 59.046 36.000 3.16 0.00 43.34 3.85
4333 7485 6.038356 GGATTTACAAATGCTTGATGGACTG 58.962 40.000 0.00 0.00 36.33 3.51
4334 7486 4.439305 TTACAAATGCTTGATGGACTGC 57.561 40.909 0.00 0.00 36.33 4.40
4335 7487 2.522185 ACAAATGCTTGATGGACTGCT 58.478 42.857 0.00 0.00 36.33 4.24
4336 7488 2.230508 ACAAATGCTTGATGGACTGCTG 59.769 45.455 0.00 0.00 36.33 4.41
4337 7489 2.211250 AATGCTTGATGGACTGCTGT 57.789 45.000 0.00 0.00 0.00 4.40
4338 7490 1.747709 ATGCTTGATGGACTGCTGTC 58.252 50.000 14.87 14.87 42.22 3.51
4339 7491 0.397564 TGCTTGATGGACTGCTGTCA 59.602 50.000 23.12 11.20 44.61 3.58
4340 7492 1.003928 TGCTTGATGGACTGCTGTCAT 59.996 47.619 23.12 14.88 44.61 3.06
4341 7493 2.236893 TGCTTGATGGACTGCTGTCATA 59.763 45.455 23.12 12.95 44.61 2.15
4342 7494 3.118149 TGCTTGATGGACTGCTGTCATAT 60.118 43.478 23.12 16.60 44.61 1.78
4343 7495 3.881688 GCTTGATGGACTGCTGTCATATT 59.118 43.478 23.12 6.40 44.61 1.28
4344 7496 4.337555 GCTTGATGGACTGCTGTCATATTT 59.662 41.667 23.12 4.79 44.61 1.40
4345 7497 5.505324 GCTTGATGGACTGCTGTCATATTTC 60.505 44.000 23.12 12.67 44.61 2.17
4346 7498 5.363562 TGATGGACTGCTGTCATATTTCT 57.636 39.130 23.12 1.78 44.61 2.52
4347 7499 5.363101 TGATGGACTGCTGTCATATTTCTC 58.637 41.667 23.12 9.99 44.61 2.87
4348 7500 4.824479 TGGACTGCTGTCATATTTCTCA 57.176 40.909 23.12 8.21 44.61 3.27
4349 7501 4.763073 TGGACTGCTGTCATATTTCTCAG 58.237 43.478 23.12 0.00 44.61 3.35
4350 7502 4.223700 TGGACTGCTGTCATATTTCTCAGT 59.776 41.667 23.12 0.00 44.61 3.41
4351 7503 5.422012 TGGACTGCTGTCATATTTCTCAGTA 59.578 40.000 23.12 0.00 44.61 2.74
4352 7504 5.982516 GGACTGCTGTCATATTTCTCAGTAG 59.017 44.000 23.12 0.00 44.61 2.57
4353 7505 6.537453 ACTGCTGTCATATTTCTCAGTAGT 57.463 37.500 8.45 8.45 44.40 2.73
4354 7506 6.940739 ACTGCTGTCATATTTCTCAGTAGTT 58.059 36.000 8.45 0.00 45.95 2.24
4355 7507 6.815641 ACTGCTGTCATATTTCTCAGTAGTTG 59.184 38.462 8.45 0.00 45.95 3.16
4356 7508 5.582269 TGCTGTCATATTTCTCAGTAGTTGC 59.418 40.000 0.00 0.00 0.00 4.17
4357 7509 5.814705 GCTGTCATATTTCTCAGTAGTTGCT 59.185 40.000 0.00 0.00 0.00 3.91
4358 7510 6.238049 GCTGTCATATTTCTCAGTAGTTGCTG 60.238 42.308 0.00 0.00 37.81 4.41
4359 7511 6.701340 TGTCATATTTCTCAGTAGTTGCTGT 58.299 36.000 0.00 0.00 37.70 4.40
4360 7512 6.813649 TGTCATATTTCTCAGTAGTTGCTGTC 59.186 38.462 0.00 0.00 37.70 3.51
4361 7513 6.813649 GTCATATTTCTCAGTAGTTGCTGTCA 59.186 38.462 0.00 0.00 37.70 3.58
4362 7514 7.331934 GTCATATTTCTCAGTAGTTGCTGTCAA 59.668 37.037 0.00 0.00 37.70 3.18
4363 7515 8.043113 TCATATTTCTCAGTAGTTGCTGTCAAT 58.957 33.333 0.00 0.00 37.70 2.57
4364 7516 6.734104 ATTTCTCAGTAGTTGCTGTCAATC 57.266 37.500 0.00 0.00 37.70 2.67
4365 7517 5.474578 TTCTCAGTAGTTGCTGTCAATCT 57.525 39.130 0.00 0.00 37.70 2.40
4366 7518 4.814147 TCTCAGTAGTTGCTGTCAATCTG 58.186 43.478 0.00 0.00 37.70 2.90
4367 7519 3.930336 TCAGTAGTTGCTGTCAATCTGG 58.070 45.455 0.00 0.00 37.70 3.86
4368 7520 3.324846 TCAGTAGTTGCTGTCAATCTGGT 59.675 43.478 0.00 0.00 37.70 4.00
4369 7521 3.681897 CAGTAGTTGCTGTCAATCTGGTC 59.318 47.826 0.00 0.00 34.29 4.02
4370 7522 2.936919 AGTTGCTGTCAATCTGGTCA 57.063 45.000 0.00 0.00 34.29 4.02
4371 7523 3.430042 AGTTGCTGTCAATCTGGTCAT 57.570 42.857 0.00 0.00 34.29 3.06
4372 7524 3.079578 AGTTGCTGTCAATCTGGTCATG 58.920 45.455 0.00 0.00 34.29 3.07
4373 7525 3.076621 GTTGCTGTCAATCTGGTCATGA 58.923 45.455 0.00 0.00 34.29 3.07
4374 7526 2.981898 TGCTGTCAATCTGGTCATGAG 58.018 47.619 0.00 0.00 0.00 2.90
4375 7527 2.568509 TGCTGTCAATCTGGTCATGAGA 59.431 45.455 0.00 0.00 0.00 3.27
4376 7528 3.008266 TGCTGTCAATCTGGTCATGAGAA 59.992 43.478 0.00 0.00 0.00 2.87
4377 7529 4.197750 GCTGTCAATCTGGTCATGAGAAT 58.802 43.478 0.00 0.00 0.00 2.40
4378 7530 4.272991 GCTGTCAATCTGGTCATGAGAATC 59.727 45.833 0.00 0.00 0.00 2.52
4379 7531 4.436332 TGTCAATCTGGTCATGAGAATCG 58.564 43.478 0.00 0.00 38.61 3.34
4380 7532 4.160252 TGTCAATCTGGTCATGAGAATCGA 59.840 41.667 0.00 0.00 38.61 3.59
4381 7533 4.505922 GTCAATCTGGTCATGAGAATCGAC 59.494 45.833 0.00 0.00 38.61 4.20
4382 7534 4.160252 TCAATCTGGTCATGAGAATCGACA 59.840 41.667 0.00 0.00 38.61 4.35
4383 7535 3.790152 TCTGGTCATGAGAATCGACAG 57.210 47.619 0.00 0.00 38.61 3.51
4384 7536 2.159184 TCTGGTCATGAGAATCGACAGC 60.159 50.000 0.00 0.00 38.61 4.40
4385 7537 1.827344 TGGTCATGAGAATCGACAGCT 59.173 47.619 0.00 0.00 38.61 4.24
4386 7538 2.234661 TGGTCATGAGAATCGACAGCTT 59.765 45.455 0.00 0.00 38.61 3.74
4387 7539 3.265791 GGTCATGAGAATCGACAGCTTT 58.734 45.455 0.00 0.00 38.61 3.51
4388 7540 3.063180 GGTCATGAGAATCGACAGCTTTG 59.937 47.826 0.00 0.00 38.61 2.77
4389 7541 3.681897 GTCATGAGAATCGACAGCTTTGT 59.318 43.478 0.00 0.00 38.61 2.83
4390 7542 3.928992 TCATGAGAATCGACAGCTTTGTC 59.071 43.478 0.00 0.00 38.61 3.18
4391 7543 3.667497 TGAGAATCGACAGCTTTGTCT 57.333 42.857 4.76 0.00 38.61 3.41
4392 7544 3.320626 TGAGAATCGACAGCTTTGTCTG 58.679 45.455 4.76 0.00 38.61 3.51
4393 7545 3.005791 TGAGAATCGACAGCTTTGTCTGA 59.994 43.478 4.76 4.43 38.61 3.27
4394 7546 3.990469 GAGAATCGACAGCTTTGTCTGAA 59.010 43.478 4.76 0.00 37.51 3.02
4395 7547 4.573900 AGAATCGACAGCTTTGTCTGAAT 58.426 39.130 4.76 0.00 37.51 2.57
4396 7548 4.391216 AGAATCGACAGCTTTGTCTGAATG 59.609 41.667 4.76 0.00 37.51 2.67
4397 7549 3.385193 TCGACAGCTTTGTCTGAATGA 57.615 42.857 4.76 0.00 37.51 2.57
4398 7550 3.930336 TCGACAGCTTTGTCTGAATGAT 58.070 40.909 4.76 0.00 37.51 2.45
4399 7551 3.928992 TCGACAGCTTTGTCTGAATGATC 59.071 43.478 4.76 0.00 37.51 2.92
4400 7552 3.681417 CGACAGCTTTGTCTGAATGATCA 59.319 43.478 0.00 0.00 37.51 2.92
4401 7553 4.331992 CGACAGCTTTGTCTGAATGATCAT 59.668 41.667 1.18 1.18 37.51 2.45
4402 7554 5.502058 CGACAGCTTTGTCTGAATGATCATC 60.502 44.000 9.06 3.57 37.51 2.92
4403 7555 5.250982 ACAGCTTTGTCTGAATGATCATCA 58.749 37.500 9.06 8.01 37.51 3.07
4404 7556 5.354513 ACAGCTTTGTCTGAATGATCATCAG 59.645 40.000 20.37 20.37 44.53 2.90
4405 7557 4.335874 AGCTTTGTCTGAATGATCATCAGC 59.664 41.667 21.08 17.65 43.19 4.26
4406 7558 4.335874 GCTTTGTCTGAATGATCATCAGCT 59.664 41.667 21.08 4.27 43.19 4.24
4407 7559 5.730847 GCTTTGTCTGAATGATCATCAGCTG 60.731 44.000 21.08 7.63 43.19 4.24
4408 7560 3.805207 TGTCTGAATGATCATCAGCTGG 58.195 45.455 15.13 0.00 43.19 4.85
4409 7561 3.453353 TGTCTGAATGATCATCAGCTGGA 59.547 43.478 15.13 4.27 43.19 3.86
4410 7562 4.102681 TGTCTGAATGATCATCAGCTGGAT 59.897 41.667 15.13 9.63 43.19 3.41
4419 7571 3.470645 CATCAGCTGGATGTGATCTGA 57.529 47.619 15.13 0.00 46.81 3.27
4420 7572 4.009370 CATCAGCTGGATGTGATCTGAT 57.991 45.455 15.13 0.00 46.81 2.90
4421 7573 4.390264 CATCAGCTGGATGTGATCTGATT 58.610 43.478 15.13 0.00 46.81 2.57
4422 7574 3.805207 TCAGCTGGATGTGATCTGATTG 58.195 45.455 15.13 0.00 0.00 2.67
4423 7575 3.453353 TCAGCTGGATGTGATCTGATTGA 59.547 43.478 15.13 0.00 0.00 2.57
4424 7576 4.080751 TCAGCTGGATGTGATCTGATTGAA 60.081 41.667 15.13 0.00 0.00 2.69
4425 7577 4.035324 CAGCTGGATGTGATCTGATTGAAC 59.965 45.833 5.57 0.00 0.00 3.18
4426 7578 3.943381 GCTGGATGTGATCTGATTGAACA 59.057 43.478 0.00 0.00 0.00 3.18
4427 7579 4.035324 GCTGGATGTGATCTGATTGAACAG 59.965 45.833 0.00 0.00 39.02 3.16
4434 7586 1.795768 TCTGATTGAACAGACGGTGC 58.204 50.000 0.00 0.00 41.21 5.01
4435 7587 0.798776 CTGATTGAACAGACGGTGCC 59.201 55.000 0.00 0.00 39.94 5.01
4436 7588 0.605319 TGATTGAACAGACGGTGCCC 60.605 55.000 0.00 0.00 0.00 5.36
4446 7598 2.509336 CGGTGCCCGTCAGATGTC 60.509 66.667 5.56 0.00 42.73 3.06
4447 7599 2.509336 GGTGCCCGTCAGATGTCG 60.509 66.667 0.00 0.00 0.00 4.35
4448 7600 2.509336 GTGCCCGTCAGATGTCGG 60.509 66.667 10.92 10.92 44.31 4.79
4449 7601 4.451150 TGCCCGTCAGATGTCGGC 62.451 66.667 12.19 8.81 43.57 5.54
4450 7602 4.148825 GCCCGTCAGATGTCGGCT 62.149 66.667 12.19 0.00 43.57 5.52
4451 7603 2.782222 GCCCGTCAGATGTCGGCTA 61.782 63.158 12.19 0.00 43.57 3.93
4452 7604 1.813859 CCCGTCAGATGTCGGCTAA 59.186 57.895 12.19 0.00 43.57 3.09
4453 7605 0.174845 CCCGTCAGATGTCGGCTAAA 59.825 55.000 12.19 0.00 43.57 1.85
4454 7606 1.202533 CCCGTCAGATGTCGGCTAAAT 60.203 52.381 12.19 0.00 43.57 1.40
4455 7607 2.128035 CCGTCAGATGTCGGCTAAATC 58.872 52.381 5.61 0.00 39.56 2.17
4456 7608 2.223829 CCGTCAGATGTCGGCTAAATCT 60.224 50.000 5.61 0.00 39.56 2.40
4457 7609 3.004419 CCGTCAGATGTCGGCTAAATCTA 59.996 47.826 5.61 0.00 39.56 1.98
4458 7610 4.499188 CCGTCAGATGTCGGCTAAATCTAA 60.499 45.833 5.61 0.00 39.56 2.10
4459 7611 5.041287 CGTCAGATGTCGGCTAAATCTAAA 58.959 41.667 0.00 0.00 0.00 1.85
4460 7612 5.692204 CGTCAGATGTCGGCTAAATCTAAAT 59.308 40.000 0.00 0.00 0.00 1.40
4461 7613 6.129062 CGTCAGATGTCGGCTAAATCTAAATC 60.129 42.308 0.00 0.00 0.00 2.17
4462 7614 6.701841 GTCAGATGTCGGCTAAATCTAAATCA 59.298 38.462 0.00 0.00 0.00 2.57
4463 7615 6.925718 TCAGATGTCGGCTAAATCTAAATCAG 59.074 38.462 0.00 0.00 0.00 2.90
4464 7616 6.146837 CAGATGTCGGCTAAATCTAAATCAGG 59.853 42.308 0.00 0.00 0.00 3.86
4465 7617 4.703897 TGTCGGCTAAATCTAAATCAGGG 58.296 43.478 0.00 0.00 0.00 4.45
4466 7618 3.498777 GTCGGCTAAATCTAAATCAGGGC 59.501 47.826 0.00 0.00 0.00 5.19
4467 7619 2.814336 CGGCTAAATCTAAATCAGGGCC 59.186 50.000 0.00 0.00 0.00 5.80
4468 7620 2.814336 GGCTAAATCTAAATCAGGGCCG 59.186 50.000 0.00 0.00 0.00 6.13
4469 7621 3.477530 GCTAAATCTAAATCAGGGCCGT 58.522 45.455 0.00 0.00 0.00 5.68
4470 7622 3.498777 GCTAAATCTAAATCAGGGCCGTC 59.501 47.826 0.00 0.00 0.00 4.79
4471 7623 2.640316 AATCTAAATCAGGGCCGTCC 57.360 50.000 0.00 0.00 0.00 4.79
4472 7624 1.507140 ATCTAAATCAGGGCCGTCCA 58.493 50.000 0.00 0.00 38.24 4.02
4473 7625 1.507140 TCTAAATCAGGGCCGTCCAT 58.493 50.000 0.00 0.00 38.24 3.41
4474 7626 1.416401 TCTAAATCAGGGCCGTCCATC 59.584 52.381 0.00 0.00 38.24 3.51
4475 7627 0.472471 TAAATCAGGGCCGTCCATCC 59.528 55.000 0.00 0.00 38.24 3.51
4476 7628 1.570857 AAATCAGGGCCGTCCATCCA 61.571 55.000 0.00 0.00 38.24 3.41
4477 7629 1.355718 AATCAGGGCCGTCCATCCAT 61.356 55.000 0.00 0.00 38.24 3.41
4478 7630 2.060567 ATCAGGGCCGTCCATCCATG 62.061 60.000 0.00 0.00 38.24 3.66
4479 7631 4.195334 AGGGCCGTCCATCCATGC 62.195 66.667 0.00 0.00 38.24 4.06
4480 7632 4.504596 GGGCCGTCCATCCATGCA 62.505 66.667 0.00 0.00 35.00 3.96
4481 7633 2.903855 GGCCGTCCATCCATGCAG 60.904 66.667 0.00 0.00 0.00 4.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 4.677673 AAATGCAAGTTCAAGCCTCTTT 57.322 36.364 0.00 0.00 0.00 2.52
24 25 6.719370 AGCCACAAGTTCAAACCAATATCTAA 59.281 34.615 0.00 0.00 0.00 2.10
56 57 0.174845 CCATGATGTTTGCAGGGCAG 59.825 55.000 0.00 0.00 40.61 4.85
258 259 2.384382 CACAATTTTGACACCGCTCAC 58.616 47.619 0.00 0.00 0.00 3.51
393 394 5.991328 ACTGTATTTATTCATGGCACTCG 57.009 39.130 0.00 0.00 0.00 4.18
464 1127 5.046159 ACCCCTCAATGTTACGTTGATCTTA 60.046 40.000 18.72 0.00 35.26 2.10
543 1208 5.068067 GGCTAAAACCAGACAAACACCTAAA 59.932 40.000 0.00 0.00 0.00 1.85
592 1257 3.505386 ACATGTGGGGCTTATTTGTCAA 58.495 40.909 0.00 0.00 0.00 3.18
596 1261 4.644234 TGTATGACATGTGGGGCTTATTTG 59.356 41.667 1.15 0.00 0.00 2.32
644 1309 1.588082 CCACACATTGGCTTGCCTC 59.412 57.895 13.18 0.00 39.07 4.70
656 1322 3.751175 GTGCTCAAATAGTTAGCCACACA 59.249 43.478 0.00 0.00 35.33 3.72
683 1349 7.362662 ACTATGTTTGTCACACTTGCTTTATG 58.637 34.615 0.00 0.00 38.61 1.90
715 2533 6.366340 TCACACTATGTTTACCCCTCAAAAA 58.634 36.000 0.00 0.00 0.00 1.94
716 2534 5.942961 TCACACTATGTTTACCCCTCAAAA 58.057 37.500 0.00 0.00 0.00 2.44
717 2535 5.570205 TCACACTATGTTTACCCCTCAAA 57.430 39.130 0.00 0.00 0.00 2.69
718 2536 5.772393 ATCACACTATGTTTACCCCTCAA 57.228 39.130 0.00 0.00 0.00 3.02
719 2537 6.631766 GCTTATCACACTATGTTTACCCCTCA 60.632 42.308 0.00 0.00 0.00 3.86
720 2538 5.758784 GCTTATCACACTATGTTTACCCCTC 59.241 44.000 0.00 0.00 0.00 4.30
721 2539 5.428783 AGCTTATCACACTATGTTTACCCCT 59.571 40.000 0.00 0.00 0.00 4.79
722 2540 5.527582 CAGCTTATCACACTATGTTTACCCC 59.472 44.000 0.00 0.00 0.00 4.95
723 2541 6.037172 CACAGCTTATCACACTATGTTTACCC 59.963 42.308 0.00 0.00 0.00 3.69
724 2542 6.816640 TCACAGCTTATCACACTATGTTTACC 59.183 38.462 0.00 0.00 0.00 2.85
725 2543 7.330946 TGTCACAGCTTATCACACTATGTTTAC 59.669 37.037 0.00 0.00 0.00 2.01
726 2544 7.382898 TGTCACAGCTTATCACACTATGTTTA 58.617 34.615 0.00 0.00 0.00 2.01
727 2545 6.230472 TGTCACAGCTTATCACACTATGTTT 58.770 36.000 0.00 0.00 0.00 2.83
728 2546 5.793817 TGTCACAGCTTATCACACTATGTT 58.206 37.500 0.00 0.00 0.00 2.71
729 2547 5.405935 TGTCACAGCTTATCACACTATGT 57.594 39.130 0.00 0.00 0.00 2.29
730 2548 6.726258 TTTGTCACAGCTTATCACACTATG 57.274 37.500 0.00 0.00 0.00 2.23
731 2549 7.928307 ATTTTGTCACAGCTTATCACACTAT 57.072 32.000 0.00 0.00 0.00 2.12
732 2550 7.744087 AATTTTGTCACAGCTTATCACACTA 57.256 32.000 0.00 0.00 0.00 2.74
733 2551 6.639632 AATTTTGTCACAGCTTATCACACT 57.360 33.333 0.00 0.00 0.00 3.55
734 2552 7.584987 ACTAATTTTGTCACAGCTTATCACAC 58.415 34.615 0.00 0.00 0.00 3.82
735 2553 7.443879 TGACTAATTTTGTCACAGCTTATCACA 59.556 33.333 9.20 0.00 39.23 3.58
736 2554 7.806690 TGACTAATTTTGTCACAGCTTATCAC 58.193 34.615 9.20 0.00 39.23 3.06
737 2555 7.977789 TGACTAATTTTGTCACAGCTTATCA 57.022 32.000 9.20 0.00 39.23 2.15
749 2567 7.148490 GCTTGTTTGGTTTGTGACTAATTTTGT 60.148 33.333 0.00 0.00 0.00 2.83
756 2574 2.691011 GGGCTTGTTTGGTTTGTGACTA 59.309 45.455 0.00 0.00 0.00 2.59
812 2630 2.448453 ACCACCCGTTTGTCTCAAAAA 58.552 42.857 0.00 0.00 0.00 1.94
813 2631 2.131776 ACCACCCGTTTGTCTCAAAA 57.868 45.000 0.00 0.00 0.00 2.44
817 2635 2.036862 ACTCTTACCACCCGTTTGTCTC 59.963 50.000 0.00 0.00 0.00 3.36
820 2638 4.628963 ATAACTCTTACCACCCGTTTGT 57.371 40.909 0.00 0.00 0.00 2.83
829 2647 6.183360 GGCTGAAGGTCATATAACTCTTACCA 60.183 42.308 0.00 0.00 0.00 3.25
830 2648 6.224584 GGCTGAAGGTCATATAACTCTTACC 58.775 44.000 0.00 0.00 0.00 2.85
938 2764 3.078836 GACCCGGGTCCCAATCGA 61.079 66.667 39.24 0.00 39.08 3.59
1032 2858 3.462678 GAGGTGAGGCGGGAGGAC 61.463 72.222 0.00 0.00 0.00 3.85
1033 2859 4.779733 GGAGGTGAGGCGGGAGGA 62.780 72.222 0.00 0.00 0.00 3.71
1120 2946 1.747552 CGAGGAAGAGGATGACGAGGA 60.748 57.143 0.00 0.00 0.00 3.71
1265 3091 0.678048 AAGCAAAGCGGGATCCAGAC 60.678 55.000 16.86 7.12 0.00 3.51
1290 3116 3.134458 CTGAAAACGCAGAGTTCCTTCT 58.866 45.455 3.91 0.00 43.37 2.85
1300 3126 0.166814 GCTACCAGCTGAAAACGCAG 59.833 55.000 17.39 0.00 38.45 5.18
1385 3215 9.476202 AGTTAAAATGGCTTCAGAAAATTGTAC 57.524 29.630 0.00 0.00 0.00 2.90
1472 3305 0.036306 AACACCTTTACCCTGGCGAG 59.964 55.000 0.00 0.00 0.00 5.03
1502 3335 5.997746 AGAGTTTGTAGTATCAAGCAAGCAA 59.002 36.000 0.00 0.00 32.42 3.91
1503 3336 5.551233 AGAGTTTGTAGTATCAAGCAAGCA 58.449 37.500 0.00 0.00 32.42 3.91
1504 3337 6.310197 CAAGAGTTTGTAGTATCAAGCAAGC 58.690 40.000 0.00 0.00 32.42 4.01
1505 3338 6.621596 GCCAAGAGTTTGTAGTATCAAGCAAG 60.622 42.308 0.00 0.00 32.42 4.01
1547 3380 6.479972 ACTAATCACATTAATCGGGACAGA 57.520 37.500 0.00 0.00 0.00 3.41
1638 3502 5.512942 TCAATCATCTCAAACCCAACCTA 57.487 39.130 0.00 0.00 0.00 3.08
1782 3646 7.540474 TGGAGGGAGTATATCTCAAATGTAC 57.460 40.000 0.00 0.00 44.40 2.90
1798 3687 4.210331 CACTTATTTTGGGATGGAGGGAG 58.790 47.826 0.00 0.00 0.00 4.30
1800 3689 3.954258 GACACTTATTTTGGGATGGAGGG 59.046 47.826 0.00 0.00 0.00 4.30
1801 3690 4.860022 AGACACTTATTTTGGGATGGAGG 58.140 43.478 0.00 0.00 0.00 4.30
1802 3691 5.500234 TGAGACACTTATTTTGGGATGGAG 58.500 41.667 0.00 0.00 0.00 3.86
1804 3693 5.105756 GGTTGAGACACTTATTTTGGGATGG 60.106 44.000 0.00 0.00 0.00 3.51
1805 3694 5.711976 AGGTTGAGACACTTATTTTGGGATG 59.288 40.000 0.00 0.00 0.00 3.51
1806 3695 5.892348 AGGTTGAGACACTTATTTTGGGAT 58.108 37.500 0.00 0.00 0.00 3.85
1808 3697 6.715264 ACTAAGGTTGAGACACTTATTTTGGG 59.285 38.462 0.00 0.00 0.00 4.12
1809 3698 7.745620 ACTAAGGTTGAGACACTTATTTTGG 57.254 36.000 0.00 0.00 0.00 3.28
1810 3699 9.268268 TGTACTAAGGTTGAGACACTTATTTTG 57.732 33.333 0.00 0.00 0.00 2.44
1811 3700 9.841295 TTGTACTAAGGTTGAGACACTTATTTT 57.159 29.630 0.00 0.00 0.00 1.82
1812 3701 9.269453 GTTGTACTAAGGTTGAGACACTTATTT 57.731 33.333 0.00 0.00 0.00 1.40
1813 3702 8.648693 AGTTGTACTAAGGTTGAGACACTTATT 58.351 33.333 0.00 0.00 0.00 1.40
1814 3703 8.191534 AGTTGTACTAAGGTTGAGACACTTAT 57.808 34.615 0.00 0.00 0.00 1.73
1815 3704 7.592885 AGTTGTACTAAGGTTGAGACACTTA 57.407 36.000 0.00 0.00 0.00 2.24
1816 3705 6.481434 AGTTGTACTAAGGTTGAGACACTT 57.519 37.500 0.00 0.00 0.00 3.16
1817 3706 6.481434 AAGTTGTACTAAGGTTGAGACACT 57.519 37.500 0.00 0.00 0.00 3.55
1818 3707 6.537660 ACAAAGTTGTACTAAGGTTGAGACAC 59.462 38.462 0.00 0.00 40.16 3.67
1819 3708 6.646267 ACAAAGTTGTACTAAGGTTGAGACA 58.354 36.000 0.00 0.00 40.16 3.41
1820 3709 8.652810 TTACAAAGTTGTACTAAGGTTGAGAC 57.347 34.615 3.38 0.00 42.84 3.36
1821 3710 9.669887 TTTTACAAAGTTGTACTAAGGTTGAGA 57.330 29.630 3.38 0.00 42.84 3.27
1846 3735 9.780186 AGTTGTACTAAGCTTGAGAAACTTATT 57.220 29.630 9.86 0.00 0.00 1.40
1847 3736 9.780186 AAGTTGTACTAAGCTTGAGAAACTTAT 57.220 29.630 19.08 5.43 34.52 1.73
1848 3737 9.609346 AAAGTTGTACTAAGCTTGAGAAACTTA 57.391 29.630 20.03 0.00 35.04 2.24
1849 3738 8.398665 CAAAGTTGTACTAAGCTTGAGAAACTT 58.601 33.333 9.86 14.46 37.03 2.66
1850 3739 7.553044 ACAAAGTTGTACTAAGCTTGAGAAACT 59.447 33.333 9.86 9.50 40.16 2.66
1851 3740 7.694886 ACAAAGTTGTACTAAGCTTGAGAAAC 58.305 34.615 9.86 7.40 40.16 2.78
1852 3741 7.859325 ACAAAGTTGTACTAAGCTTGAGAAA 57.141 32.000 9.86 0.00 40.16 2.52
1876 3765 9.056005 TGTCTCGACTTTGTACTAACTTTAGTA 57.944 33.333 4.98 4.98 43.36 1.82
1877 3766 7.859875 GTGTCTCGACTTTGTACTAACTTTAGT 59.140 37.037 6.85 6.85 45.39 2.24
1878 3767 8.074972 AGTGTCTCGACTTTGTACTAACTTTAG 58.925 37.037 0.00 0.00 36.82 1.85
1879 3768 7.934457 AGTGTCTCGACTTTGTACTAACTTTA 58.066 34.615 0.00 0.00 0.00 1.85
1880 3769 6.803642 AGTGTCTCGACTTTGTACTAACTTT 58.196 36.000 0.00 0.00 0.00 2.66
1881 3770 6.388435 AGTGTCTCGACTTTGTACTAACTT 57.612 37.500 0.00 0.00 0.00 2.66
1882 3771 6.388435 AAGTGTCTCGACTTTGTACTAACT 57.612 37.500 0.00 0.00 31.92 2.24
1883 3772 8.739649 AATAAGTGTCTCGACTTTGTACTAAC 57.260 34.615 0.00 0.00 37.38 2.34
1884 3773 9.754382 AAAATAAGTGTCTCGACTTTGTACTAA 57.246 29.630 0.00 0.00 37.38 2.24
1885 3774 9.188588 CAAAATAAGTGTCTCGACTTTGTACTA 57.811 33.333 0.00 0.00 37.38 1.82
1886 3775 7.170998 CCAAAATAAGTGTCTCGACTTTGTACT 59.829 37.037 0.00 0.00 37.38 2.73
1887 3776 7.288672 CCAAAATAAGTGTCTCGACTTTGTAC 58.711 38.462 0.00 0.00 37.38 2.90
1888 3777 6.425721 CCCAAAATAAGTGTCTCGACTTTGTA 59.574 38.462 0.00 0.00 37.38 2.41
1889 3778 5.238650 CCCAAAATAAGTGTCTCGACTTTGT 59.761 40.000 0.00 0.00 37.38 2.83
1890 3779 5.468746 TCCCAAAATAAGTGTCTCGACTTTG 59.531 40.000 0.00 0.61 37.38 2.77
1891 3780 5.469084 GTCCCAAAATAAGTGTCTCGACTTT 59.531 40.000 0.00 0.00 37.38 2.66
1892 3781 4.995487 GTCCCAAAATAAGTGTCTCGACTT 59.005 41.667 0.00 0.00 39.54 3.01
1893 3782 4.566987 GTCCCAAAATAAGTGTCTCGACT 58.433 43.478 0.00 0.00 0.00 4.18
1894 3783 3.367025 CGTCCCAAAATAAGTGTCTCGAC 59.633 47.826 0.00 0.00 0.00 4.20
1895 3784 3.581755 CGTCCCAAAATAAGTGTCTCGA 58.418 45.455 0.00 0.00 0.00 4.04
1896 3785 2.671396 CCGTCCCAAAATAAGTGTCTCG 59.329 50.000 0.00 0.00 0.00 4.04
1897 3786 3.933332 CTCCGTCCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
1898 3787 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
1899 3788 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
1900 3789 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
1901 3790 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
1902 3791 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
1903 3792 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
1904 3793 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
1905 3794 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
1906 3795 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
1907 3796 1.732117 TTACTCCCTCCGTCCCAAAA 58.268 50.000 0.00 0.00 0.00 2.44
1908 3797 1.961133 ATTACTCCCTCCGTCCCAAA 58.039 50.000 0.00 0.00 0.00 3.28
1909 3798 1.961133 AATTACTCCCTCCGTCCCAA 58.039 50.000 0.00 0.00 0.00 4.12
1910 3799 1.961133 AAATTACTCCCTCCGTCCCA 58.039 50.000 0.00 0.00 0.00 4.37
1911 3800 5.545588 GTTATAAATTACTCCCTCCGTCCC 58.454 45.833 0.00 0.00 0.00 4.46
1912 3801 5.225642 CGTTATAAATTACTCCCTCCGTCC 58.774 45.833 0.00 0.00 0.00 4.79
1913 3802 5.010012 TCCGTTATAAATTACTCCCTCCGTC 59.990 44.000 0.00 0.00 0.00 4.79
1914 3803 4.895297 TCCGTTATAAATTACTCCCTCCGT 59.105 41.667 0.00 0.00 0.00 4.69
1915 3804 5.225642 GTCCGTTATAAATTACTCCCTCCG 58.774 45.833 0.00 0.00 0.00 4.63
1916 3805 5.070847 TGGTCCGTTATAAATTACTCCCTCC 59.929 44.000 0.00 0.00 0.00 4.30
1917 3806 5.987953 GTGGTCCGTTATAAATTACTCCCTC 59.012 44.000 0.00 0.00 0.00 4.30
1918 3807 5.664457 AGTGGTCCGTTATAAATTACTCCCT 59.336 40.000 0.00 0.00 0.00 4.20
1919 3808 5.756833 CAGTGGTCCGTTATAAATTACTCCC 59.243 44.000 0.00 0.00 0.00 4.30
1920 3809 5.235831 GCAGTGGTCCGTTATAAATTACTCC 59.764 44.000 0.00 0.00 0.00 3.85
1921 3810 5.813672 TGCAGTGGTCCGTTATAAATTACTC 59.186 40.000 0.00 0.00 0.00 2.59
1922 3811 5.736813 TGCAGTGGTCCGTTATAAATTACT 58.263 37.500 0.00 0.00 0.00 2.24
1923 3812 6.128227 TGTTGCAGTGGTCCGTTATAAATTAC 60.128 38.462 0.00 0.00 0.00 1.89
1924 3813 5.938710 TGTTGCAGTGGTCCGTTATAAATTA 59.061 36.000 0.00 0.00 0.00 1.40
1925 3814 4.762765 TGTTGCAGTGGTCCGTTATAAATT 59.237 37.500 0.00 0.00 0.00 1.82
1926 3815 4.328536 TGTTGCAGTGGTCCGTTATAAAT 58.671 39.130 0.00 0.00 0.00 1.40
1927 3816 3.741249 TGTTGCAGTGGTCCGTTATAAA 58.259 40.909 0.00 0.00 0.00 1.40
1928 3817 3.404224 TGTTGCAGTGGTCCGTTATAA 57.596 42.857 0.00 0.00 0.00 0.98
1929 3818 3.331150 CTTGTTGCAGTGGTCCGTTATA 58.669 45.455 0.00 0.00 0.00 0.98
1930 3819 2.151202 CTTGTTGCAGTGGTCCGTTAT 58.849 47.619 0.00 0.00 0.00 1.89
1931 3820 1.588674 CTTGTTGCAGTGGTCCGTTA 58.411 50.000 0.00 0.00 0.00 3.18
1932 3821 1.724582 GCTTGTTGCAGTGGTCCGTT 61.725 55.000 0.00 0.00 42.31 4.44
1933 3822 2.186826 GCTTGTTGCAGTGGTCCGT 61.187 57.895 0.00 0.00 42.31 4.69
1934 3823 0.602638 TAGCTTGTTGCAGTGGTCCG 60.603 55.000 0.00 0.00 45.94 4.79
1935 3824 1.604604 TTAGCTTGTTGCAGTGGTCC 58.395 50.000 0.00 0.00 45.94 4.46
1997 3886 1.934589 AAAAAGCTGCCGGAAAACAC 58.065 45.000 5.05 0.00 0.00 3.32
2024 3913 8.726988 GGTTACTCTTTATGTGAACAATTAGCA 58.273 33.333 0.00 0.00 0.00 3.49
2220 5244 7.305993 CGTTTTTCTCAAAAATAGAGTGCAACC 60.306 37.037 0.00 0.00 41.85 3.77
2231 5255 7.623268 CGAAGGAATCGTTTTTCTCAAAAAT 57.377 32.000 0.00 0.00 46.52 1.82
2255 5279 3.268023 AGCCTAGTGCATAAAGGTCAC 57.732 47.619 12.05 0.00 44.83 3.67
2291 5315 6.856938 GGCATGTAGATACTTCTTACAGTACG 59.143 42.308 0.00 0.00 31.92 3.67
2371 5395 5.623264 CGAACAAACAATCAAGCATACGAAA 59.377 36.000 0.00 0.00 0.00 3.46
2372 5396 5.143660 CGAACAAACAATCAAGCATACGAA 58.856 37.500 0.00 0.00 0.00 3.85
2373 5397 4.707563 CGAACAAACAATCAAGCATACGA 58.292 39.130 0.00 0.00 0.00 3.43
2385 5409 3.379240 CATGTCCATTGCGAACAAACAA 58.621 40.909 0.00 0.00 39.77 2.83
2572 5596 1.541588 GTAAACAGGGCCTGCTGAAAG 59.458 52.381 33.04 8.46 34.37 2.62
2653 5677 6.183360 GGACAATATTTACCAGAACGACTTGG 60.183 42.308 0.00 0.00 0.00 3.61
2846 5870 1.314730 AACAAAGAACCGCGGAACAT 58.685 45.000 35.90 15.03 0.00 2.71
2854 5878 8.837059 CGATTAAGAACAAATAACAAAGAACCG 58.163 33.333 0.00 0.00 0.00 4.44
2870 5894 4.866921 ACAAAGGGCAAACGATTAAGAAC 58.133 39.130 0.00 0.00 0.00 3.01
2885 5909 8.980481 ATCATATGTTAAGGTAGAACAAAGGG 57.020 34.615 1.90 0.00 40.07 3.95
3004 6028 5.305585 GTCACCTCAATGACAAAGGAGTTA 58.694 41.667 8.45 0.00 46.89 2.24
3058 6082 3.372730 GCCGTCCAATGCCTGCAA 61.373 61.111 0.00 0.00 0.00 4.08
3199 6223 5.230726 CAGAAGCAAATTTCCACGCATATTC 59.769 40.000 1.62 0.00 0.00 1.75
3300 6324 5.009010 CAGAAGTTAGTTGATGCTGTGGTTT 59.991 40.000 0.00 0.00 0.00 3.27
3424 6448 0.946221 GTGGAGCTGGAGTGTTCACG 60.946 60.000 0.00 0.00 0.00 4.35
3444 6468 0.741915 TTCAACGTTTTCAGGTGGCC 59.258 50.000 0.00 0.00 0.00 5.36
3491 6515 4.806481 CAGTGTGCATCGCAGCGC 62.806 66.667 10.87 0.00 40.08 5.92
3581 6605 6.543465 CAGGATACATATGCTCAAAGGACAAA 59.457 38.462 1.58 0.00 41.41 2.83
3684 6708 5.594926 ACGTAGTACAACTGTTACAAGCTT 58.405 37.500 0.00 0.00 41.94 3.74
3703 6732 4.272100 GCTGGAGGCGAAAACGTA 57.728 55.556 0.00 0.00 0.00 3.57
3713 6742 1.737838 TAAATGCTTCACGCTGGAGG 58.262 50.000 0.00 0.00 40.11 4.30
3917 6951 9.866655 AATCAACTGGATAAACATACCACATAT 57.133 29.630 0.00 0.00 34.28 1.78
3918 6952 9.693739 AAATCAACTGGATAAACATACCACATA 57.306 29.630 0.00 0.00 34.28 2.29
3919 6953 8.593945 AAATCAACTGGATAAACATACCACAT 57.406 30.769 0.00 0.00 34.28 3.21
4004 7144 1.216678 TCTGAACCAAAGGAGCCCAAA 59.783 47.619 0.00 0.00 0.00 3.28
4006 7146 0.401738 CTCTGAACCAAAGGAGCCCA 59.598 55.000 0.00 0.00 0.00 5.36
4033 7173 8.678199 CCAAATCAAATCCTCTAAAACTCCTAC 58.322 37.037 0.00 0.00 0.00 3.18
4073 7213 3.389925 ACCAAACGACGTCATAGGAAA 57.610 42.857 17.16 0.00 0.00 3.13
4074 7214 3.319755 GAACCAAACGACGTCATAGGAA 58.680 45.455 17.16 0.00 0.00 3.36
4075 7215 2.669113 CGAACCAAACGACGTCATAGGA 60.669 50.000 17.16 0.00 0.00 2.94
4099 7240 2.628657 AGGTTCCTAAGGATTCCGATCG 59.371 50.000 8.51 8.51 33.55 3.69
4139 7280 9.974750 GAAATCTAAGAATTGGACTAGAAAACG 57.025 33.333 0.00 0.00 38.82 3.60
4183 7334 9.301897 GGGCTATTTTATTGAATTCTACAGGAT 57.698 33.333 7.05 0.00 0.00 3.24
4184 7335 8.278639 TGGGCTATTTTATTGAATTCTACAGGA 58.721 33.333 7.05 0.00 0.00 3.86
4185 7336 8.463930 TGGGCTATTTTATTGAATTCTACAGG 57.536 34.615 7.05 0.00 0.00 4.00
4204 7356 1.134640 ACGCGTACATCATTTGGGCTA 60.135 47.619 11.67 0.00 0.00 3.93
4205 7357 0.392461 ACGCGTACATCATTTGGGCT 60.392 50.000 11.67 0.00 0.00 5.19
4206 7358 0.248054 CACGCGTACATCATTTGGGC 60.248 55.000 13.44 0.00 0.00 5.36
4207 7359 0.376852 CCACGCGTACATCATTTGGG 59.623 55.000 13.44 0.00 0.00 4.12
4208 7360 0.248054 GCCACGCGTACATCATTTGG 60.248 55.000 13.44 6.86 0.00 3.28
4209 7361 0.445829 TGCCACGCGTACATCATTTG 59.554 50.000 13.44 0.00 0.00 2.32
4210 7362 0.446222 GTGCCACGCGTACATCATTT 59.554 50.000 13.44 0.00 0.00 2.32
4211 7363 0.672091 TGTGCCACGCGTACATCATT 60.672 50.000 13.44 0.00 31.41 2.57
4212 7364 0.672091 TTGTGCCACGCGTACATCAT 60.672 50.000 13.44 0.00 36.91 2.45
4213 7365 0.880718 TTTGTGCCACGCGTACATCA 60.881 50.000 13.44 11.37 36.91 3.07
4214 7366 0.179225 CTTTGTGCCACGCGTACATC 60.179 55.000 13.44 8.96 36.91 3.06
4215 7367 0.882927 ACTTTGTGCCACGCGTACAT 60.883 50.000 13.44 0.00 36.91 2.29
4216 7368 0.249363 TACTTTGTGCCACGCGTACA 60.249 50.000 13.44 10.92 35.00 2.90
4217 7369 0.860533 TTACTTTGTGCCACGCGTAC 59.139 50.000 13.44 7.73 0.00 3.67
4218 7370 0.860533 GTTACTTTGTGCCACGCGTA 59.139 50.000 13.44 0.00 0.00 4.42
4219 7371 1.090625 TGTTACTTTGTGCCACGCGT 61.091 50.000 5.58 5.58 0.00 6.01
4220 7372 0.656205 GTGTTACTTTGTGCCACGCG 60.656 55.000 3.53 3.53 0.00 6.01
4221 7373 0.317519 GGTGTTACTTTGTGCCACGC 60.318 55.000 0.00 0.00 0.00 5.34
4222 7374 0.041663 CGGTGTTACTTTGTGCCACG 60.042 55.000 0.00 0.00 0.00 4.94
4223 7375 0.317519 GCGGTGTTACTTTGTGCCAC 60.318 55.000 0.00 0.00 0.00 5.01
4224 7376 1.448922 GGCGGTGTTACTTTGTGCCA 61.449 55.000 0.00 0.00 40.66 4.92
4225 7377 1.284715 GGCGGTGTTACTTTGTGCC 59.715 57.895 0.00 0.00 0.00 5.01
4226 7378 1.170290 AGGGCGGTGTTACTTTGTGC 61.170 55.000 0.00 0.00 0.00 4.57
4227 7379 0.591170 CAGGGCGGTGTTACTTTGTG 59.409 55.000 0.00 0.00 0.00 3.33
4228 7380 0.470766 TCAGGGCGGTGTTACTTTGT 59.529 50.000 0.00 0.00 0.00 2.83
4229 7381 1.265905 GTTCAGGGCGGTGTTACTTTG 59.734 52.381 0.00 0.00 0.00 2.77
4230 7382 1.601166 GTTCAGGGCGGTGTTACTTT 58.399 50.000 0.00 0.00 0.00 2.66
4231 7383 0.601841 CGTTCAGGGCGGTGTTACTT 60.602 55.000 0.00 0.00 0.00 2.24
4232 7384 1.005394 CGTTCAGGGCGGTGTTACT 60.005 57.895 0.00 0.00 0.00 2.24
4233 7385 0.881600 AACGTTCAGGGCGGTGTTAC 60.882 55.000 0.00 0.00 0.00 2.50
4234 7386 0.678395 TAACGTTCAGGGCGGTGTTA 59.322 50.000 2.82 0.00 0.00 2.41
4235 7387 0.601841 CTAACGTTCAGGGCGGTGTT 60.602 55.000 2.82 0.00 0.00 3.32
4236 7388 1.005394 CTAACGTTCAGGGCGGTGT 60.005 57.895 2.82 0.00 0.00 4.16
4237 7389 0.320073 TTCTAACGTTCAGGGCGGTG 60.320 55.000 2.82 0.00 0.00 4.94
4238 7390 0.611714 ATTCTAACGTTCAGGGCGGT 59.388 50.000 2.82 0.00 0.00 5.68
4239 7391 1.006832 CATTCTAACGTTCAGGGCGG 58.993 55.000 2.82 0.00 0.00 6.13
4240 7392 0.373716 GCATTCTAACGTTCAGGGCG 59.626 55.000 2.82 0.00 0.00 6.13
4241 7393 1.739067 AGCATTCTAACGTTCAGGGC 58.261 50.000 2.82 3.83 0.00 5.19
4242 7394 2.348666 CGAAGCATTCTAACGTTCAGGG 59.651 50.000 2.82 0.00 44.75 4.45
4243 7395 2.993899 ACGAAGCATTCTAACGTTCAGG 59.006 45.455 2.82 0.00 44.75 3.86
4244 7396 4.647291 AACGAAGCATTCTAACGTTCAG 57.353 40.909 2.82 1.04 44.75 3.02
4245 7397 5.412526 AAAACGAAGCATTCTAACGTTCA 57.587 34.783 2.82 0.00 44.75 3.18
4267 7419 7.765695 ATCTCAAAGCACAGGAATAGAAAAA 57.234 32.000 0.00 0.00 0.00 1.94
4268 7420 7.448161 TCAATCTCAAAGCACAGGAATAGAAAA 59.552 33.333 0.00 0.00 0.00 2.29
4269 7421 6.942005 TCAATCTCAAAGCACAGGAATAGAAA 59.058 34.615 0.00 0.00 0.00 2.52
4270 7422 6.475504 TCAATCTCAAAGCACAGGAATAGAA 58.524 36.000 0.00 0.00 0.00 2.10
4271 7423 6.053632 TCAATCTCAAAGCACAGGAATAGA 57.946 37.500 0.00 0.00 0.00 1.98
4272 7424 6.318144 ACATCAATCTCAAAGCACAGGAATAG 59.682 38.462 0.00 0.00 0.00 1.73
4273 7425 6.182627 ACATCAATCTCAAAGCACAGGAATA 58.817 36.000 0.00 0.00 0.00 1.75
4274 7426 5.014858 ACATCAATCTCAAAGCACAGGAAT 58.985 37.500 0.00 0.00 0.00 3.01
4275 7427 4.401022 ACATCAATCTCAAAGCACAGGAA 58.599 39.130 0.00 0.00 0.00 3.36
4276 7428 4.025040 ACATCAATCTCAAAGCACAGGA 57.975 40.909 0.00 0.00 0.00 3.86
4277 7429 5.181009 TCTACATCAATCTCAAAGCACAGG 58.819 41.667 0.00 0.00 0.00 4.00
4278 7430 6.292221 CGATCTACATCAATCTCAAAGCACAG 60.292 42.308 0.00 0.00 0.00 3.66
4279 7431 5.521372 CGATCTACATCAATCTCAAAGCACA 59.479 40.000 0.00 0.00 0.00 4.57
4280 7432 5.750547 TCGATCTACATCAATCTCAAAGCAC 59.249 40.000 0.00 0.00 0.00 4.40
4281 7433 5.906073 TCGATCTACATCAATCTCAAAGCA 58.094 37.500 0.00 0.00 0.00 3.91
4282 7434 6.834959 TTCGATCTACATCAATCTCAAAGC 57.165 37.500 0.00 0.00 0.00 3.51
4283 7435 8.640091 TCTTTCGATCTACATCAATCTCAAAG 57.360 34.615 0.00 0.00 0.00 2.77
4284 7436 7.708322 CCTCTTTCGATCTACATCAATCTCAAA 59.292 37.037 0.00 0.00 0.00 2.69
4285 7437 7.068716 TCCTCTTTCGATCTACATCAATCTCAA 59.931 37.037 0.00 0.00 0.00 3.02
4286 7438 6.547510 TCCTCTTTCGATCTACATCAATCTCA 59.452 38.462 0.00 0.00 0.00 3.27
4287 7439 6.976088 TCCTCTTTCGATCTACATCAATCTC 58.024 40.000 0.00 0.00 0.00 2.75
4288 7440 6.968263 TCCTCTTTCGATCTACATCAATCT 57.032 37.500 0.00 0.00 0.00 2.40
4289 7441 8.600449 AAATCCTCTTTCGATCTACATCAATC 57.400 34.615 0.00 0.00 0.00 2.67
4290 7442 9.482627 GTAAATCCTCTTTCGATCTACATCAAT 57.517 33.333 0.00 0.00 0.00 2.57
4291 7443 8.474831 TGTAAATCCTCTTTCGATCTACATCAA 58.525 33.333 0.00 0.00 0.00 2.57
4292 7444 8.007405 TGTAAATCCTCTTTCGATCTACATCA 57.993 34.615 0.00 0.00 0.00 3.07
4293 7445 8.873215 TTGTAAATCCTCTTTCGATCTACATC 57.127 34.615 0.00 0.00 0.00 3.06
4294 7446 9.838339 ATTTGTAAATCCTCTTTCGATCTACAT 57.162 29.630 0.00 0.00 0.00 2.29
4295 7447 9.098355 CATTTGTAAATCCTCTTTCGATCTACA 57.902 33.333 0.00 0.00 0.00 2.74
4296 7448 8.064814 GCATTTGTAAATCCTCTTTCGATCTAC 58.935 37.037 0.00 0.00 0.00 2.59
4297 7449 7.987458 AGCATTTGTAAATCCTCTTTCGATCTA 59.013 33.333 0.00 0.00 0.00 1.98
4298 7450 6.825721 AGCATTTGTAAATCCTCTTTCGATCT 59.174 34.615 0.00 0.00 0.00 2.75
4299 7451 7.020914 AGCATTTGTAAATCCTCTTTCGATC 57.979 36.000 0.00 0.00 0.00 3.69
4300 7452 7.121168 TCAAGCATTTGTAAATCCTCTTTCGAT 59.879 33.333 0.00 0.00 35.73 3.59
4301 7453 6.429692 TCAAGCATTTGTAAATCCTCTTTCGA 59.570 34.615 0.00 0.00 35.73 3.71
4302 7454 6.611381 TCAAGCATTTGTAAATCCTCTTTCG 58.389 36.000 0.00 0.00 35.73 3.46
4303 7455 7.490402 CCATCAAGCATTTGTAAATCCTCTTTC 59.510 37.037 0.00 0.00 35.73 2.62
4304 7456 7.178983 TCCATCAAGCATTTGTAAATCCTCTTT 59.821 33.333 0.00 0.00 35.73 2.52
4305 7457 6.664816 TCCATCAAGCATTTGTAAATCCTCTT 59.335 34.615 0.00 0.00 35.73 2.85
4306 7458 6.096001 GTCCATCAAGCATTTGTAAATCCTCT 59.904 38.462 0.00 0.00 35.73 3.69
4307 7459 6.096001 AGTCCATCAAGCATTTGTAAATCCTC 59.904 38.462 0.00 0.00 35.73 3.71
4308 7460 5.954150 AGTCCATCAAGCATTTGTAAATCCT 59.046 36.000 0.00 0.00 35.73 3.24
4309 7461 6.038356 CAGTCCATCAAGCATTTGTAAATCC 58.962 40.000 0.00 0.00 35.73 3.01
4310 7462 5.517770 GCAGTCCATCAAGCATTTGTAAATC 59.482 40.000 0.00 0.00 35.73 2.17
4311 7463 5.186409 AGCAGTCCATCAAGCATTTGTAAAT 59.814 36.000 0.00 0.00 35.73 1.40
4312 7464 4.523943 AGCAGTCCATCAAGCATTTGTAAA 59.476 37.500 0.00 0.00 35.73 2.01
4313 7465 4.081406 AGCAGTCCATCAAGCATTTGTAA 58.919 39.130 0.00 0.00 35.73 2.41
4314 7466 3.441222 CAGCAGTCCATCAAGCATTTGTA 59.559 43.478 0.00 0.00 35.73 2.41
4315 7467 2.230508 CAGCAGTCCATCAAGCATTTGT 59.769 45.455 0.00 0.00 35.73 2.83
4316 7468 2.230508 ACAGCAGTCCATCAAGCATTTG 59.769 45.455 0.00 0.00 35.57 2.32
4317 7469 2.490903 GACAGCAGTCCATCAAGCATTT 59.509 45.455 0.00 0.00 38.89 2.32
4318 7470 2.089980 GACAGCAGTCCATCAAGCATT 58.910 47.619 0.00 0.00 38.89 3.56
4319 7471 1.003928 TGACAGCAGTCCATCAAGCAT 59.996 47.619 6.80 0.00 44.33 3.79
4320 7472 0.397564 TGACAGCAGTCCATCAAGCA 59.602 50.000 6.80 0.00 44.33 3.91
4321 7473 1.747709 ATGACAGCAGTCCATCAAGC 58.252 50.000 6.80 0.00 44.33 4.01
4322 7474 5.821470 AGAAATATGACAGCAGTCCATCAAG 59.179 40.000 6.80 0.00 44.33 3.02
4323 7475 5.748402 AGAAATATGACAGCAGTCCATCAA 58.252 37.500 6.80 0.00 44.33 2.57
4324 7476 5.104817 TGAGAAATATGACAGCAGTCCATCA 60.105 40.000 6.80 0.00 44.33 3.07
4325 7477 5.363101 TGAGAAATATGACAGCAGTCCATC 58.637 41.667 6.80 0.00 44.33 3.51
4326 7478 5.104610 ACTGAGAAATATGACAGCAGTCCAT 60.105 40.000 6.80 3.53 44.33 3.41
4327 7479 4.223700 ACTGAGAAATATGACAGCAGTCCA 59.776 41.667 6.80 0.00 44.33 4.02
4328 7480 4.764172 ACTGAGAAATATGACAGCAGTCC 58.236 43.478 6.80 0.00 44.33 3.85
4329 7481 6.568869 ACTACTGAGAAATATGACAGCAGTC 58.431 40.000 1.64 1.64 45.19 3.51
4330 7482 6.537453 ACTACTGAGAAATATGACAGCAGT 57.463 37.500 0.00 0.00 38.51 4.40
4331 7483 6.238049 GCAACTACTGAGAAATATGACAGCAG 60.238 42.308 0.00 0.00 34.25 4.24
4332 7484 5.582269 GCAACTACTGAGAAATATGACAGCA 59.418 40.000 0.00 0.00 34.25 4.41
4333 7485 5.814705 AGCAACTACTGAGAAATATGACAGC 59.185 40.000 0.00 0.00 34.25 4.40
4334 7486 6.815641 ACAGCAACTACTGAGAAATATGACAG 59.184 38.462 0.00 0.00 40.25 3.51
4335 7487 6.701340 ACAGCAACTACTGAGAAATATGACA 58.299 36.000 0.00 0.00 40.25 3.58
4336 7488 6.813649 TGACAGCAACTACTGAGAAATATGAC 59.186 38.462 0.00 0.00 40.25 3.06
4337 7489 6.935167 TGACAGCAACTACTGAGAAATATGA 58.065 36.000 0.00 0.00 40.25 2.15
4338 7490 7.601073 TTGACAGCAACTACTGAGAAATATG 57.399 36.000 0.00 0.00 40.25 1.78
4339 7491 8.263640 AGATTGACAGCAACTACTGAGAAATAT 58.736 33.333 0.00 0.00 40.25 1.28
4340 7492 7.547019 CAGATTGACAGCAACTACTGAGAAATA 59.453 37.037 0.00 0.00 40.25 1.40
4341 7493 6.370994 CAGATTGACAGCAACTACTGAGAAAT 59.629 38.462 0.00 0.00 40.25 2.17
4342 7494 5.698089 CAGATTGACAGCAACTACTGAGAAA 59.302 40.000 0.00 0.00 40.25 2.52
4343 7495 5.233225 CAGATTGACAGCAACTACTGAGAA 58.767 41.667 0.00 0.00 40.25 2.87
4344 7496 4.322273 CCAGATTGACAGCAACTACTGAGA 60.322 45.833 0.00 0.00 40.25 3.27
4345 7497 3.931468 CCAGATTGACAGCAACTACTGAG 59.069 47.826 0.00 0.00 40.25 3.35
4346 7498 3.324846 ACCAGATTGACAGCAACTACTGA 59.675 43.478 0.00 0.00 40.25 3.41
4347 7499 3.668447 ACCAGATTGACAGCAACTACTG 58.332 45.455 0.00 0.00 43.59 2.74
4348 7500 3.324846 TGACCAGATTGACAGCAACTACT 59.675 43.478 0.00 0.00 36.72 2.57
4349 7501 3.664107 TGACCAGATTGACAGCAACTAC 58.336 45.455 0.00 0.00 36.72 2.73
4350 7502 4.020307 TCATGACCAGATTGACAGCAACTA 60.020 41.667 0.00 0.00 36.72 2.24
4351 7503 2.936919 TGACCAGATTGACAGCAACT 57.063 45.000 0.00 0.00 36.72 3.16
4352 7504 3.076621 TCATGACCAGATTGACAGCAAC 58.923 45.455 0.00 0.00 36.72 4.17
4353 7505 3.008266 TCTCATGACCAGATTGACAGCAA 59.992 43.478 0.00 0.00 38.60 3.91
4354 7506 2.568509 TCTCATGACCAGATTGACAGCA 59.431 45.455 0.00 0.00 0.00 4.41
4355 7507 3.257469 TCTCATGACCAGATTGACAGC 57.743 47.619 0.00 0.00 0.00 4.40
4356 7508 4.507021 CGATTCTCATGACCAGATTGACAG 59.493 45.833 0.00 0.00 0.00 3.51
4357 7509 4.160252 TCGATTCTCATGACCAGATTGACA 59.840 41.667 0.00 0.00 0.00 3.58
4358 7510 4.505922 GTCGATTCTCATGACCAGATTGAC 59.494 45.833 0.00 0.07 0.00 3.18
4359 7511 4.160252 TGTCGATTCTCATGACCAGATTGA 59.840 41.667 0.00 0.00 0.00 2.57
4360 7512 4.436332 TGTCGATTCTCATGACCAGATTG 58.564 43.478 0.00 0.00 0.00 2.67
4361 7513 4.691175 CTGTCGATTCTCATGACCAGATT 58.309 43.478 0.00 0.00 0.00 2.40
4362 7514 3.492309 GCTGTCGATTCTCATGACCAGAT 60.492 47.826 0.00 0.00 0.00 2.90
4363 7515 2.159184 GCTGTCGATTCTCATGACCAGA 60.159 50.000 0.00 0.00 0.00 3.86
4364 7516 2.159128 AGCTGTCGATTCTCATGACCAG 60.159 50.000 0.00 0.00 0.00 4.00
4365 7517 1.827344 AGCTGTCGATTCTCATGACCA 59.173 47.619 0.00 0.00 0.00 4.02
4366 7518 2.593346 AGCTGTCGATTCTCATGACC 57.407 50.000 0.00 0.00 0.00 4.02
4367 7519 3.681897 ACAAAGCTGTCGATTCTCATGAC 59.318 43.478 0.00 0.00 0.00 3.06
4368 7520 3.928992 GACAAAGCTGTCGATTCTCATGA 59.071 43.478 0.00 0.00 42.54 3.07
4369 7521 4.256140 GACAAAGCTGTCGATTCTCATG 57.744 45.455 0.00 0.00 42.54 3.07
4380 7532 5.250982 TGATGATCATTCAGACAAAGCTGT 58.749 37.500 10.14 0.00 37.20 4.40
4381 7533 5.730847 GCTGATGATCATTCAGACAAAGCTG 60.731 44.000 26.17 10.77 34.73 4.24
4382 7534 4.335874 GCTGATGATCATTCAGACAAAGCT 59.664 41.667 26.17 0.00 34.73 3.74
4383 7535 4.335874 AGCTGATGATCATTCAGACAAAGC 59.664 41.667 26.17 17.33 34.73 3.51
4384 7536 5.220873 CCAGCTGATGATCATTCAGACAAAG 60.221 44.000 26.17 15.36 34.73 2.77
4385 7537 4.638865 CCAGCTGATGATCATTCAGACAAA 59.361 41.667 26.17 3.57 34.73 2.83
4386 7538 4.080751 TCCAGCTGATGATCATTCAGACAA 60.081 41.667 26.17 13.02 34.73 3.18
4387 7539 3.453353 TCCAGCTGATGATCATTCAGACA 59.547 43.478 26.17 13.75 34.73 3.41
4388 7540 4.069300 TCCAGCTGATGATCATTCAGAC 57.931 45.455 26.17 19.82 34.73 3.51
4389 7541 4.976540 ATCCAGCTGATGATCATTCAGA 57.023 40.909 26.17 13.38 34.73 3.27
4400 7552 4.102681 TCAATCAGATCACATCCAGCTGAT 59.897 41.667 17.39 3.92 45.37 2.90
4401 7553 3.453353 TCAATCAGATCACATCCAGCTGA 59.547 43.478 17.39 1.21 39.61 4.26
4402 7554 3.805207 TCAATCAGATCACATCCAGCTG 58.195 45.455 6.78 6.78 0.00 4.24
4403 7555 4.197750 GTTCAATCAGATCACATCCAGCT 58.802 43.478 0.00 0.00 0.00 4.24
4404 7556 3.943381 TGTTCAATCAGATCACATCCAGC 59.057 43.478 0.00 0.00 0.00 4.85
4405 7557 5.293814 GTCTGTTCAATCAGATCACATCCAG 59.706 44.000 0.00 0.00 44.59 3.86
4406 7558 5.181009 GTCTGTTCAATCAGATCACATCCA 58.819 41.667 0.00 0.00 44.59 3.41
4407 7559 4.269603 CGTCTGTTCAATCAGATCACATCC 59.730 45.833 0.00 0.00 44.59 3.51
4408 7560 4.269603 CCGTCTGTTCAATCAGATCACATC 59.730 45.833 0.00 0.00 44.59 3.06
4409 7561 4.186926 CCGTCTGTTCAATCAGATCACAT 58.813 43.478 0.00 0.00 44.59 3.21
4410 7562 3.006859 ACCGTCTGTTCAATCAGATCACA 59.993 43.478 0.00 0.00 44.59 3.58
4411 7563 3.369147 CACCGTCTGTTCAATCAGATCAC 59.631 47.826 0.00 0.00 44.59 3.06
4412 7564 3.588955 CACCGTCTGTTCAATCAGATCA 58.411 45.455 0.00 0.00 44.59 2.92
4413 7565 2.349886 GCACCGTCTGTTCAATCAGATC 59.650 50.000 0.00 0.00 44.59 2.75
4414 7566 2.350522 GCACCGTCTGTTCAATCAGAT 58.649 47.619 0.00 0.00 44.59 2.90
4415 7567 1.608025 GGCACCGTCTGTTCAATCAGA 60.608 52.381 0.00 0.00 41.40 3.27
4416 7568 0.798776 GGCACCGTCTGTTCAATCAG 59.201 55.000 0.00 0.00 36.85 2.90
4417 7569 0.605319 GGGCACCGTCTGTTCAATCA 60.605 55.000 0.00 0.00 40.86 2.57
4418 7570 2.171635 GGGCACCGTCTGTTCAATC 58.828 57.895 0.00 0.00 40.86 2.67
4419 7571 4.397348 GGGCACCGTCTGTTCAAT 57.603 55.556 0.00 0.00 40.86 2.57
4431 7583 2.509336 CCGACATCTGACGGGCAC 60.509 66.667 12.30 0.00 46.58 5.01
4436 7588 3.085443 AGATTTAGCCGACATCTGACG 57.915 47.619 0.00 0.00 0.00 4.35
4437 7589 6.701841 TGATTTAGATTTAGCCGACATCTGAC 59.298 38.462 0.00 0.00 0.00 3.51
4438 7590 6.816136 TGATTTAGATTTAGCCGACATCTGA 58.184 36.000 0.00 0.00 0.00 3.27
4439 7591 6.146837 CCTGATTTAGATTTAGCCGACATCTG 59.853 42.308 0.00 0.00 0.00 2.90
4440 7592 6.226787 CCTGATTTAGATTTAGCCGACATCT 58.773 40.000 0.00 0.00 0.00 2.90
4441 7593 5.409826 CCCTGATTTAGATTTAGCCGACATC 59.590 44.000 0.00 0.00 0.00 3.06
4442 7594 5.308825 CCCTGATTTAGATTTAGCCGACAT 58.691 41.667 0.00 0.00 0.00 3.06
4443 7595 4.703897 CCCTGATTTAGATTTAGCCGACA 58.296 43.478 0.00 0.00 0.00 4.35
4444 7596 3.498777 GCCCTGATTTAGATTTAGCCGAC 59.501 47.826 0.00 0.00 0.00 4.79
4445 7597 3.496160 GGCCCTGATTTAGATTTAGCCGA 60.496 47.826 0.00 0.00 0.00 5.54
4446 7598 2.814336 GGCCCTGATTTAGATTTAGCCG 59.186 50.000 0.00 0.00 0.00 5.52
4447 7599 2.814336 CGGCCCTGATTTAGATTTAGCC 59.186 50.000 0.00 0.00 34.50 3.93
4448 7600 3.477530 ACGGCCCTGATTTAGATTTAGC 58.522 45.455 0.00 0.00 0.00 3.09
4449 7601 4.065789 GGACGGCCCTGATTTAGATTTAG 58.934 47.826 0.00 0.00 0.00 1.85
4450 7602 3.456644 TGGACGGCCCTGATTTAGATTTA 59.543 43.478 3.83 0.00 35.38 1.40
4451 7603 2.241176 TGGACGGCCCTGATTTAGATTT 59.759 45.455 3.83 0.00 35.38 2.17
4452 7604 1.843851 TGGACGGCCCTGATTTAGATT 59.156 47.619 3.83 0.00 35.38 2.40
4453 7605 1.507140 TGGACGGCCCTGATTTAGAT 58.493 50.000 3.83 0.00 35.38 1.98
4454 7606 1.416401 GATGGACGGCCCTGATTTAGA 59.584 52.381 3.83 0.00 35.38 2.10
4455 7607 1.543429 GGATGGACGGCCCTGATTTAG 60.543 57.143 3.83 0.00 35.38 1.85
4456 7608 0.472471 GGATGGACGGCCCTGATTTA 59.528 55.000 3.83 0.00 35.38 1.40
4457 7609 1.227383 GGATGGACGGCCCTGATTT 59.773 57.895 3.83 0.00 35.38 2.17
4458 7610 1.355718 ATGGATGGACGGCCCTGATT 61.356 55.000 3.83 0.00 35.38 2.57
4459 7611 1.771746 ATGGATGGACGGCCCTGAT 60.772 57.895 3.83 0.00 35.38 2.90
4460 7612 2.366837 ATGGATGGACGGCCCTGA 60.367 61.111 3.83 0.00 35.38 3.86
4461 7613 2.203252 CATGGATGGACGGCCCTG 60.203 66.667 3.83 0.00 35.38 4.45
4462 7614 4.195334 GCATGGATGGACGGCCCT 62.195 66.667 3.83 0.00 35.38 5.19
4463 7615 4.504596 TGCATGGATGGACGGCCC 62.505 66.667 3.83 0.00 0.00 5.80
4464 7616 2.903855 CTGCATGGATGGACGGCC 60.904 66.667 0.00 0.00 0.00 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.