Multiple sequence alignment - TraesCS1B01G391200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G391200 chr1B 100.000 2693 0 0 1 2693 624656816 624654124 0.000000e+00 4974
1 TraesCS1B01G391200 chr1B 87.607 468 52 4 1 465 45991308 45991772 3.050000e-149 538
2 TraesCS1B01G391200 chr1D 98.234 1755 26 5 942 2693 454150196 454148444 0.000000e+00 3064
3 TraesCS1B01G391200 chr1D 95.006 801 19 6 1 800 454151096 454150316 0.000000e+00 1238
4 TraesCS1B01G391200 chr1D 84.868 152 13 7 477 625 490356559 490356703 7.770000e-31 145
5 TraesCS1B01G391200 chr1D 94.366 71 4 0 859 929 454150246 454150176 2.830000e-20 110
6 TraesCS1B01G391200 chr7B 89.030 474 42 3 1 465 12745128 12744656 1.800000e-161 579
7 TraesCS1B01G391200 chr5A 88.866 476 41 7 1 465 347535739 347536213 2.330000e-160 575
8 TraesCS1B01G391200 chr5A 80.882 340 51 9 1322 1660 536661850 536661524 3.440000e-64 255
9 TraesCS1B01G391200 chr7A 88.362 464 48 4 7 467 339518899 339518439 1.090000e-153 553
10 TraesCS1B01G391200 chr7A 88.110 471 44 7 1 460 533574505 533574974 1.410000e-152 549
11 TraesCS1B01G391200 chr7A 87.391 460 49 6 7 461 648046266 648045811 1.110000e-143 520
12 TraesCS1B01G391200 chr7A 87.671 438 45 4 40 469 635697012 635696576 4.000000e-138 501
13 TraesCS1B01G391200 chr2B 87.607 468 52 4 1 465 522215829 522215365 3.050000e-149 538
14 TraesCS1B01G391200 chr2B 83.553 152 17 5 477 626 411496055 411496200 4.680000e-28 135
15 TraesCS1B01G391200 chr2A 90.278 144 9 1 1 144 62632722 62632860 1.650000e-42 183
16 TraesCS1B01G391200 chr3B 85.430 151 14 6 477 625 667859377 667859521 1.670000e-32 150
17 TraesCS1B01G391200 chr3B 84.211 152 17 7 477 626 526000488 526000342 1.010000e-29 141
18 TraesCS1B01G391200 chr4B 85.135 148 14 6 477 621 473906501 473906359 7.770000e-31 145
19 TraesCS1B01G391200 chr6B 84.211 152 15 6 477 625 300881713 300881568 3.620000e-29 139
20 TraesCS1B01G391200 chr6B 83.766 154 15 7 477 626 420747724 420747577 1.300000e-28 137
21 TraesCS1B01G391200 chr3D 84.211 152 14 7 477 625 101562221 101562077 3.620000e-29 139


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G391200 chr1B 624654124 624656816 2692 True 4974.000000 4974 100.000000 1 2693 1 chr1B.!!$R1 2692
1 TraesCS1B01G391200 chr1D 454148444 454151096 2652 True 1470.666667 3064 95.868667 1 2693 3 chr1D.!!$R1 2692

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
646 648 0.103208 AGGACATCTGTCGGAATCGC 59.897 55.0 4.36 0.0 45.65 4.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2227 2263 0.386113 TTACAAACAAACCGGCCAGC 59.614 50.0 0.0 0.0 0.0 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 4.638304 ACGATTTGCTAGTGTTGGTAAGT 58.362 39.130 0.00 0.00 0.00 2.24
75 76 7.458409 AGTGTTGGTAAGTAAGAATCGAGTA 57.542 36.000 0.00 0.00 0.00 2.59
287 288 3.386078 TGCTTTATTGTTCAACTTGGGCA 59.614 39.130 0.00 0.00 0.00 5.36
457 459 1.304134 ACATTTTCGTCCTGGGCCC 60.304 57.895 17.59 17.59 0.00 5.80
473 475 1.376812 CCCGCCACTGGTTAAGGAC 60.377 63.158 0.00 0.00 0.00 3.85
479 481 0.736325 CACTGGTTAAGGACGAGGCG 60.736 60.000 0.00 0.00 38.31 5.52
484 486 1.287425 GTTAAGGACGAGGCGATTGG 58.713 55.000 0.00 0.00 0.00 3.16
507 509 3.872771 GGGTGCCAAGCATTTGAATAATG 59.127 43.478 0.00 0.00 41.91 1.90
544 546 2.107950 TTAGTTAGCATTGTGCCGCT 57.892 45.000 0.00 0.00 46.52 5.52
545 547 2.107950 TAGTTAGCATTGTGCCGCTT 57.892 45.000 0.00 0.00 46.52 4.68
546 548 0.523072 AGTTAGCATTGTGCCGCTTG 59.477 50.000 0.00 0.00 46.52 4.01
547 549 0.521291 GTTAGCATTGTGCCGCTTGA 59.479 50.000 0.00 0.00 46.52 3.02
548 550 0.804364 TTAGCATTGTGCCGCTTGAG 59.196 50.000 0.00 0.00 46.52 3.02
549 551 1.647545 TAGCATTGTGCCGCTTGAGC 61.648 55.000 0.00 0.00 46.52 4.26
570 572 5.652518 AGCGGTGTTTATCTCTTAGACTTC 58.347 41.667 0.00 0.00 0.00 3.01
646 648 0.103208 AGGACATCTGTCGGAATCGC 59.897 55.000 4.36 0.00 45.65 4.58
671 673 1.445095 GCAGGAGATGAGCATCCGT 59.555 57.895 6.84 0.00 40.73 4.69
817 851 1.003718 CCACTCGTCCCCTGAAACC 60.004 63.158 0.00 0.00 0.00 3.27
818 852 1.003718 CACTCGTCCCCTGAAACCC 60.004 63.158 0.00 0.00 0.00 4.11
819 853 2.222013 ACTCGTCCCCTGAAACCCC 61.222 63.158 0.00 0.00 0.00 4.95
820 854 2.122324 TCGTCCCCTGAAACCCCA 60.122 61.111 0.00 0.00 0.00 4.96
821 855 2.185310 CTCGTCCCCTGAAACCCCAG 62.185 65.000 0.00 0.00 0.00 4.45
822 856 2.035783 GTCCCCTGAAACCCCAGC 59.964 66.667 0.00 0.00 32.97 4.85
823 857 3.646715 TCCCCTGAAACCCCAGCG 61.647 66.667 0.00 0.00 32.97 5.18
842 876 4.776322 CGTGCGCCCTTCCATCCA 62.776 66.667 4.18 0.00 0.00 3.41
843 877 2.124151 GTGCGCCCTTCCATCCAT 60.124 61.111 4.18 0.00 0.00 3.41
844 878 2.189499 GTGCGCCCTTCCATCCATC 61.189 63.158 4.18 0.00 0.00 3.51
845 879 2.192979 GCGCCCTTCCATCCATCA 59.807 61.111 0.00 0.00 0.00 3.07
846 880 2.189499 GCGCCCTTCCATCCATCAC 61.189 63.158 0.00 0.00 0.00 3.06
847 881 1.889105 CGCCCTTCCATCCATCACG 60.889 63.158 0.00 0.00 0.00 4.35
848 882 2.189499 GCCCTTCCATCCATCACGC 61.189 63.158 0.00 0.00 0.00 5.34
849 883 1.526917 CCCTTCCATCCATCACGCC 60.527 63.158 0.00 0.00 0.00 5.68
850 884 1.224315 CCTTCCATCCATCACGCCA 59.776 57.895 0.00 0.00 0.00 5.69
851 885 1.097547 CCTTCCATCCATCACGCCAC 61.098 60.000 0.00 0.00 0.00 5.01
852 886 1.077787 TTCCATCCATCACGCCACC 60.078 57.895 0.00 0.00 0.00 4.61
853 887 1.846712 TTCCATCCATCACGCCACCA 61.847 55.000 0.00 0.00 0.00 4.17
854 888 1.152902 CCATCCATCACGCCACCAT 60.153 57.895 0.00 0.00 0.00 3.55
855 889 1.449726 CCATCCATCACGCCACCATG 61.450 60.000 0.00 0.00 0.00 3.66
856 890 0.749091 CATCCATCACGCCACCATGT 60.749 55.000 0.00 0.00 0.00 3.21
857 891 0.749091 ATCCATCACGCCACCATGTG 60.749 55.000 0.00 0.00 37.44 3.21
883 917 2.237392 CTGGAACCCTTTCTCCTTCGAT 59.763 50.000 0.00 0.00 32.51 3.59
958 992 1.075600 GAGGTGGAGGAGGAGGAGG 60.076 68.421 0.00 0.00 0.00 4.30
959 993 1.547755 AGGTGGAGGAGGAGGAGGA 60.548 63.158 0.00 0.00 0.00 3.71
960 994 1.075600 GGTGGAGGAGGAGGAGGAG 60.076 68.421 0.00 0.00 0.00 3.69
963 997 1.292941 TGGAGGAGGAGGAGGAGGAG 61.293 65.000 0.00 0.00 0.00 3.69
964 998 1.541672 GAGGAGGAGGAGGAGGAGG 59.458 68.421 0.00 0.00 0.00 4.30
965 999 0.996762 GAGGAGGAGGAGGAGGAGGA 60.997 65.000 0.00 0.00 0.00 3.71
966 1000 0.998945 AGGAGGAGGAGGAGGAGGAG 60.999 65.000 0.00 0.00 0.00 3.69
967 1001 1.541672 GAGGAGGAGGAGGAGGAGG 59.458 68.421 0.00 0.00 0.00 4.30
968 1002 2.018086 AGGAGGAGGAGGAGGAGGG 61.018 68.421 0.00 0.00 0.00 4.30
1525 1559 2.123077 AGATGGAGGAGGAGGCCG 60.123 66.667 0.00 0.00 0.00 6.13
1638 1672 0.614697 TCTCTGCCTTCATCGACCCA 60.615 55.000 0.00 0.00 0.00 4.51
1913 1948 4.259933 TGGATACCTGCTGGAGTAGTAA 57.740 45.455 17.64 0.00 37.04 2.24
1931 1966 4.833390 AGTAATTCTCTGTGGTACTTGCC 58.167 43.478 0.00 0.00 0.00 4.52
2048 2083 3.001330 GTGTCTGTGTGTGCTACAAGAAC 59.999 47.826 0.00 0.00 41.89 3.01
2052 2087 2.354510 TGTGTGTGCTACAAGAACTTGC 59.645 45.455 13.50 2.11 44.03 4.01
2094 2129 5.764686 TGATGATAGCACCATGACAATTACC 59.235 40.000 0.00 0.00 0.00 2.85
2172 2208 3.442273 TGGCTCAGAAACAAACGAGTTTT 59.558 39.130 0.00 0.00 41.48 2.43
2194 2230 0.390860 CAGGAGCACGAGGGGATTAG 59.609 60.000 0.00 0.00 0.00 1.73
2219 2255 5.297776 CCCTTCAATGATGTTGTAGATCCAC 59.702 44.000 0.00 0.00 0.00 4.02
2227 2263 0.384309 TTGTAGATCCACTAGCGGCG 59.616 55.000 0.51 0.51 0.00 6.46
2470 2506 8.691661 AAACCTTATATATAAGCCACAACTGG 57.308 34.615 22.25 11.75 38.69 4.00
2608 2644 3.567164 GCATCTACCCTCATTGACATTGG 59.433 47.826 0.00 0.00 0.00 3.16
2619 2655 6.183360 CCTCATTGACATTGGTCTGTGAATAC 60.183 42.308 0.00 0.00 44.61 1.89
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 7.739498 TCTTAAGTGTAACATCCTTGAAACC 57.261 36.000 1.63 0.00 41.43 3.27
63 64 6.208007 TGAGAACCACTTGTACTCGATTCTTA 59.792 38.462 0.00 0.00 0.00 2.10
75 76 8.964476 AATCGATATAAATGAGAACCACTTGT 57.036 30.769 0.00 0.00 0.00 3.16
107 108 4.750098 ACTGAGTTGTGTATTCAAAGGTCG 59.250 41.667 0.00 0.00 0.00 4.79
109 110 6.588204 TGTACTGAGTTGTGTATTCAAAGGT 58.412 36.000 0.00 0.00 0.00 3.50
110 111 7.011950 TGTTGTACTGAGTTGTGTATTCAAAGG 59.988 37.037 0.00 0.00 0.00 3.11
185 186 7.023575 CAGGCTAACATCAAAACATAAGACAC 58.976 38.462 0.00 0.00 0.00 3.67
198 199 7.517614 TTTATGTTTGAACAGGCTAACATCA 57.482 32.000 14.15 3.49 41.16 3.07
203 204 8.630054 ACACTATTTATGTTTGAACAGGCTAA 57.370 30.769 2.77 0.00 43.04 3.09
457 459 0.736325 CTCGTCCTTAACCAGTGGCG 60.736 60.000 9.78 2.61 0.00 5.69
484 486 0.614812 ATTCAAATGCTTGGCACCCC 59.385 50.000 0.00 0.00 43.04 4.95
507 509 4.296690 ACTAATTACTCTCGCGGCATTAC 58.703 43.478 6.13 0.00 0.00 1.89
544 546 5.185249 AGTCTAAGAGATAAACACCGCTCAA 59.815 40.000 0.00 0.00 0.00 3.02
545 547 4.705507 AGTCTAAGAGATAAACACCGCTCA 59.294 41.667 0.00 0.00 0.00 4.26
546 548 5.251601 AGTCTAAGAGATAAACACCGCTC 57.748 43.478 0.00 0.00 0.00 5.03
547 549 5.419471 AGAAGTCTAAGAGATAAACACCGCT 59.581 40.000 0.00 0.00 0.00 5.52
548 550 5.652518 AGAAGTCTAAGAGATAAACACCGC 58.347 41.667 0.00 0.00 0.00 5.68
549 551 7.066525 AGAGAGAAGTCTAAGAGATAAACACCG 59.933 40.741 0.00 0.00 30.97 4.94
550 552 8.288689 AGAGAGAAGTCTAAGAGATAAACACC 57.711 38.462 0.00 0.00 30.97 4.16
623 625 3.429547 CGATTCCGACAGATGTCCTCTTT 60.430 47.826 7.37 0.00 41.86 2.52
624 626 2.099921 CGATTCCGACAGATGTCCTCTT 59.900 50.000 7.37 0.00 41.86 2.85
625 627 1.678627 CGATTCCGACAGATGTCCTCT 59.321 52.381 7.37 0.00 41.86 3.69
626 628 1.866063 GCGATTCCGACAGATGTCCTC 60.866 57.143 7.37 0.00 41.86 3.71
627 629 0.103208 GCGATTCCGACAGATGTCCT 59.897 55.000 7.37 0.00 41.86 3.85
671 673 2.112297 AAAACGGGAGAGCGCCAA 59.888 55.556 2.29 0.00 0.00 4.52
825 859 4.776322 TGGATGGAAGGGCGCACG 62.776 66.667 10.83 0.00 0.00 5.34
826 860 2.124151 ATGGATGGAAGGGCGCAC 60.124 61.111 10.83 5.15 0.00 5.34
827 861 2.192979 GATGGATGGAAGGGCGCA 59.807 61.111 10.83 0.00 0.00 6.09
828 862 2.189499 GTGATGGATGGAAGGGCGC 61.189 63.158 0.00 0.00 0.00 6.53
830 864 2.189499 GCGTGATGGATGGAAGGGC 61.189 63.158 0.00 0.00 0.00 5.19
832 866 1.097547 GTGGCGTGATGGATGGAAGG 61.098 60.000 0.00 0.00 0.00 3.46
833 867 1.097547 GGTGGCGTGATGGATGGAAG 61.098 60.000 0.00 0.00 0.00 3.46
834 868 1.077787 GGTGGCGTGATGGATGGAA 60.078 57.895 0.00 0.00 0.00 3.53
835 869 1.634865 ATGGTGGCGTGATGGATGGA 61.635 55.000 0.00 0.00 0.00 3.41
836 870 1.152902 ATGGTGGCGTGATGGATGG 60.153 57.895 0.00 0.00 0.00 3.51
837 871 0.749091 ACATGGTGGCGTGATGGATG 60.749 55.000 0.00 0.00 0.00 3.51
838 872 0.749091 CACATGGTGGCGTGATGGAT 60.749 55.000 0.00 0.00 35.02 3.41
839 873 1.377072 CACATGGTGGCGTGATGGA 60.377 57.895 0.00 0.00 35.02 3.41
840 874 3.055080 GCACATGGTGGCGTGATGG 62.055 63.158 0.00 0.00 35.02 3.51
841 875 1.588824 AAGCACATGGTGGCGTGATG 61.589 55.000 0.00 0.00 35.02 3.07
842 876 1.303561 AAGCACATGGTGGCGTGAT 60.304 52.632 0.00 0.00 35.02 3.06
843 877 1.965930 GAAGCACATGGTGGCGTGA 60.966 57.895 0.00 0.00 35.02 4.35
844 878 2.562912 GAAGCACATGGTGGCGTG 59.437 61.111 0.00 0.00 33.64 5.34
845 879 2.672996 GGAAGCACATGGTGGCGT 60.673 61.111 0.00 0.00 33.64 5.68
846 880 2.360350 AGGAAGCACATGGTGGCG 60.360 61.111 0.00 0.00 33.64 5.69
847 881 2.345760 CCAGGAAGCACATGGTGGC 61.346 63.158 0.00 0.00 44.34 5.01
848 882 4.007457 CCAGGAAGCACATGGTGG 57.993 61.111 0.00 0.00 44.34 4.61
852 886 0.038744 AGGGTTCCAGGAAGCACATG 59.961 55.000 28.66 0.00 41.18 3.21
853 887 0.779997 AAGGGTTCCAGGAAGCACAT 59.220 50.000 28.66 13.91 41.18 3.21
854 888 0.555769 AAAGGGTTCCAGGAAGCACA 59.444 50.000 28.66 0.00 41.18 4.57
855 889 1.202940 AGAAAGGGTTCCAGGAAGCAC 60.203 52.381 28.66 19.04 41.18 4.40
856 890 1.073923 GAGAAAGGGTTCCAGGAAGCA 59.926 52.381 28.66 0.00 41.18 3.91
857 891 1.614583 GGAGAAAGGGTTCCAGGAAGC 60.615 57.143 21.50 21.50 39.04 3.86
883 917 3.801620 GGTGAGGAACCCGAGGAA 58.198 61.111 0.00 0.00 44.02 3.36
930 964 4.779733 TCCACCTCCTCCTCCGCC 62.780 72.222 0.00 0.00 0.00 6.13
931 965 3.151022 CTCCACCTCCTCCTCCGC 61.151 72.222 0.00 0.00 0.00 5.54
932 966 2.443016 CCTCCACCTCCTCCTCCG 60.443 72.222 0.00 0.00 0.00 4.63
933 967 1.075600 CTCCTCCACCTCCTCCTCC 60.076 68.421 0.00 0.00 0.00 4.30
934 968 1.075600 CCTCCTCCACCTCCTCCTC 60.076 68.421 0.00 0.00 0.00 3.71
935 969 1.547755 TCCTCCTCCACCTCCTCCT 60.548 63.158 0.00 0.00 0.00 3.69
936 970 1.075600 CTCCTCCTCCACCTCCTCC 60.076 68.421 0.00 0.00 0.00 4.30
937 971 1.075600 CCTCCTCCTCCACCTCCTC 60.076 68.421 0.00 0.00 0.00 3.71
938 972 1.547755 TCCTCCTCCTCCACCTCCT 60.548 63.158 0.00 0.00 0.00 3.69
939 973 1.075600 CTCCTCCTCCTCCACCTCC 60.076 68.421 0.00 0.00 0.00 4.30
940 974 1.075600 CCTCCTCCTCCTCCACCTC 60.076 68.421 0.00 0.00 0.00 3.85
941 975 1.547755 TCCTCCTCCTCCTCCACCT 60.548 63.158 0.00 0.00 0.00 4.00
942 976 1.075600 CTCCTCCTCCTCCTCCACC 60.076 68.421 0.00 0.00 0.00 4.61
943 977 1.075600 CCTCCTCCTCCTCCTCCAC 60.076 68.421 0.00 0.00 0.00 4.02
944 978 1.230650 TCCTCCTCCTCCTCCTCCA 60.231 63.158 0.00 0.00 0.00 3.86
945 979 1.541672 CTCCTCCTCCTCCTCCTCC 59.458 68.421 0.00 0.00 0.00 4.30
946 980 0.996762 TCCTCCTCCTCCTCCTCCTC 60.997 65.000 0.00 0.00 0.00 3.71
958 992 2.503382 GGTCATCGCCCTCCTCCTC 61.503 68.421 0.00 0.00 0.00 3.71
959 993 1.656092 TAGGTCATCGCCCTCCTCCT 61.656 60.000 0.00 0.00 33.35 3.69
960 994 0.759436 TTAGGTCATCGCCCTCCTCC 60.759 60.000 0.00 0.00 33.35 4.30
963 997 1.749033 CCTTAGGTCATCGCCCTCC 59.251 63.158 0.00 0.00 33.35 4.30
964 998 1.069935 GCCTTAGGTCATCGCCCTC 59.930 63.158 0.00 0.00 33.35 4.30
965 999 1.383248 AGCCTTAGGTCATCGCCCT 60.383 57.895 0.00 0.00 36.04 5.19
966 1000 1.069935 GAGCCTTAGGTCATCGCCC 59.930 63.158 0.00 0.00 40.37 6.13
967 1001 1.823295 TGAGCCTTAGGTCATCGCC 59.177 57.895 0.00 0.00 45.34 5.54
1176 1210 4.208686 GTGGCGAGGTAGCGGGAG 62.209 72.222 0.00 0.00 38.18 4.30
1525 1559 2.434185 TTCGTCCATGCTGCCGAC 60.434 61.111 0.00 0.00 0.00 4.79
1638 1672 2.270874 CTATGCCGGCCACCTCCTTT 62.271 60.000 26.77 0.00 0.00 3.11
1913 1948 4.471386 ACATAGGCAAGTACCACAGAGAAT 59.529 41.667 0.00 0.00 0.00 2.40
1981 2016 2.969262 GGTGGAAAGGGGAACAAATCAA 59.031 45.455 0.00 0.00 0.00 2.57
1983 2018 2.562738 CTGGTGGAAAGGGGAACAAATC 59.437 50.000 0.00 0.00 0.00 2.17
2048 2083 4.074970 AGAACCAACAGGTCATTAGCAAG 58.925 43.478 0.00 0.00 33.53 4.01
2052 2087 5.491070 TCATCAGAACCAACAGGTCATTAG 58.509 41.667 0.00 0.00 33.53 1.73
2172 2208 2.230189 ATCCCCTCGTGCTCCTGAGA 62.230 60.000 0.00 0.00 34.04 3.27
2194 2230 4.276926 GGATCTACAACATCATTGAAGGGC 59.723 45.833 0.00 0.00 0.00 5.19
2227 2263 0.386113 TTACAAACAAACCGGCCAGC 59.614 50.000 0.00 0.00 0.00 4.85
2608 2644 3.213249 ACCGAAGTCGTATTCACAGAC 57.787 47.619 0.00 0.00 37.74 3.51
2619 2655 0.788391 GCTACACCAAACCGAAGTCG 59.212 55.000 0.00 0.00 39.44 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.