Multiple sequence alignment - TraesCS1B01G390800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G390800 chr1B 100.000 7279 0 0 1 7279 624028463 624021185 0.000000e+00 13442.0
1 TraesCS1B01G390800 chr1B 99.420 3105 8 2 129 3223 120995048 120998152 0.000000e+00 5627.0
2 TraesCS1B01G390800 chr1B 92.946 1928 119 8 1090 3012 653054414 653052499 0.000000e+00 2791.0
3 TraesCS1B01G390800 chr1B 97.716 788 17 1 3223 4010 653051480 653052266 0.000000e+00 1354.0
4 TraesCS1B01G390800 chr1B 100.000 680 0 0 3223 3902 120999166 120998487 0.000000e+00 1256.0
5 TraesCS1B01G390800 chr1B 98.856 612 5 1 3997 4606 120999620 121000231 0.000000e+00 1090.0
6 TraesCS1B01G390800 chr1B 96.517 603 21 0 3223 3825 348031772 348031170 0.000000e+00 998.0
7 TraesCS1B01G390800 chr1B 95.212 543 18 4 3997 4535 653051026 653050488 0.000000e+00 852.0
8 TraesCS1B01G390800 chr1B 94.107 543 24 3 3997 4535 348032217 348032755 0.000000e+00 819.0
9 TraesCS1B01G390800 chr1B 96.875 352 8 3 4979 5328 619395842 619396192 2.930000e-163 586.0
10 TraesCS1B01G390800 chr1B 99.500 200 1 0 130 329 624024056 624023857 1.490000e-96 364.0
11 TraesCS1B01G390800 chr1B 99.500 200 1 0 4408 4607 624028334 624028135 1.490000e-96 364.0
12 TraesCS1B01G390800 chr1B 98.995 199 2 0 130 328 121000033 121000231 2.500000e-94 357.0
13 TraesCS1B01G390800 chr1B 98.500 200 3 0 4408 4607 120995049 120995248 3.230000e-93 353.0
14 TraesCS1B01G390800 chr1B 95.628 183 8 0 2961 3143 653052499 653052317 1.990000e-75 294.0
15 TraesCS1B01G390800 chr1B 85.603 257 24 9 6022 6271 624028823 624028573 2.610000e-64 257.0
16 TraesCS1B01G390800 chr1B 78.892 379 56 14 5501 5861 623992426 623992054 1.220000e-57 235.0
17 TraesCS1B01G390800 chr1B 100.000 104 0 0 3904 4007 120998252 120998149 7.450000e-45 193.0
18 TraesCS1B01G390800 chr1B 76.355 406 62 18 5497 5877 623994130 623993734 3.470000e-43 187.0
19 TraesCS1B01G390800 chr1B 79.574 235 45 3 4651 4883 623994811 623994578 1.620000e-36 165.0
20 TraesCS1B01G390800 chr1B 77.224 281 43 12 4651 4921 623998179 623997910 2.120000e-30 145.0
21 TraesCS1B01G390800 chr1B 87.121 132 9 4 130 257 653050615 653050488 7.610000e-30 143.0
22 TraesCS1B01G390800 chr1B 87.121 132 9 4 130 257 653055375 653055248 7.610000e-30 143.0
23 TraesCS1B01G390800 chr1B 98.333 60 1 0 3164 3223 653052320 653052261 9.990000e-19 106.0
24 TraesCS1B01G390800 chr1A 99.644 3094 11 0 130 3223 11727824 11724731 0.000000e+00 5653.0
25 TraesCS1B01G390800 chr1A 92.086 1630 115 6 1129 2758 549050309 549051924 0.000000e+00 2283.0
26 TraesCS1B01G390800 chr1A 85.248 1410 175 21 1457 2862 23435373 23433993 0.000000e+00 1421.0
27 TraesCS1B01G390800 chr1A 98.741 794 1 1 3223 4007 11723941 11724734 0.000000e+00 1404.0
28 TraesCS1B01G390800 chr1A 88.634 1091 80 19 6192 7279 548457645 548456596 0.000000e+00 1288.0
29 TraesCS1B01G390800 chr1A 99.508 610 3 0 3997 4606 11723570 11722961 0.000000e+00 1110.0
30 TraesCS1B01G390800 chr1A 93.333 510 25 3 5340 5842 548458750 548458243 0.000000e+00 745.0
31 TraesCS1B01G390800 chr1A 93.750 352 21 1 4623 4973 548459100 548458749 1.800000e-145 527.0
32 TraesCS1B01G390800 chr1A 73.880 1317 313 23 1454 2760 345338719 345340014 1.410000e-136 497.0
33 TraesCS1B01G390800 chr1A 90.741 378 24 6 5844 6211 548458052 548457676 1.820000e-135 494.0
34 TraesCS1B01G390800 chr1A 84.286 420 66 0 3997 4416 23432391 23431972 1.890000e-110 411.0
35 TraesCS1B01G390800 chr1A 98.995 199 2 0 130 328 11723159 11722961 2.500000e-94 357.0
36 TraesCS1B01G390800 chr1A 98.010 201 4 0 4407 4607 11727825 11727625 4.180000e-92 350.0
37 TraesCS1B01G390800 chr1A 86.640 247 25 6 6029 6271 548459559 548459317 4.330000e-67 267.0
38 TraesCS1B01G390800 chr1A 79.795 391 54 16 5501 5873 548456441 548456058 2.010000e-65 261.0
39 TraesCS1B01G390800 chr1A 78.392 398 65 11 5497 5877 548449037 548448644 9.440000e-59 239.0
40 TraesCS1B01G390800 chr1A 78.272 405 54 18 5501 5877 548447334 548446936 5.680000e-56 230.0
41 TraesCS1B01G390800 chr1A 80.000 235 40 5 4651 4879 548457345 548457112 4.520000e-37 167.0
42 TraesCS1B01G390800 chr1A 78.125 288 44 11 4651 4921 548449692 548449407 1.620000e-36 165.0
43 TraesCS1B01G390800 chr1A 84.158 101 9 4 11 105 548528878 548528779 2.800000e-14 91.6
44 TraesCS1B01G390800 chr4A 93.084 1923 121 5 1090 3012 140789933 140791843 0.000000e+00 2804.0
45 TraesCS1B01G390800 chr4A 92.668 1923 129 5 1090 3012 729146750 729144840 0.000000e+00 2760.0
46 TraesCS1B01G390800 chr4A 97.970 788 15 1 3223 4010 140792862 140792076 0.000000e+00 1365.0
47 TraesCS1B01G390800 chr4A 97.843 788 16 1 3223 4010 729143821 729144607 0.000000e+00 1360.0
48 TraesCS1B01G390800 chr4A 95.028 543 19 4 3997 4535 140793316 140793854 0.000000e+00 846.0
49 TraesCS1B01G390800 chr4A 94.843 543 20 4 3997 4535 729143367 729142829 0.000000e+00 841.0
50 TraesCS1B01G390800 chr4A 92.330 352 22 4 4978 5328 740079247 740078900 5.070000e-136 496.0
51 TraesCS1B01G390800 chr4A 95.082 183 9 0 2961 3143 140791843 140792025 9.240000e-74 289.0
52 TraesCS1B01G390800 chr4A 95.082 183 9 0 2961 3143 729144840 729144658 9.240000e-74 289.0
53 TraesCS1B01G390800 chr4A 87.218 133 9 4 129 257 140788970 140789098 2.120000e-30 145.0
54 TraesCS1B01G390800 chr4A 87.121 132 9 4 130 257 729142956 729142829 7.610000e-30 143.0
55 TraesCS1B01G390800 chr4A 86.466 133 10 3 129 257 729147705 729147577 9.850000e-29 139.0
56 TraesCS1B01G390800 chr4A 86.364 132 10 4 130 257 140793727 140793854 3.540000e-28 137.0
57 TraesCS1B01G390800 chr4A 96.667 60 2 0 3164 3223 729144661 729144602 4.650000e-17 100.0
58 TraesCS1B01G390800 chr4A 95.000 60 3 0 3164 3223 140792022 140792081 2.160000e-15 95.3
59 TraesCS1B01G390800 chr5A 92.408 1923 125 8 1090 3012 53233197 53235098 0.000000e+00 2723.0
60 TraesCS1B01G390800 chr5A 97.843 788 16 1 3223 4010 53236117 53235331 0.000000e+00 1360.0
61 TraesCS1B01G390800 chr5A 95.028 543 18 5 3997 4535 53236571 53237108 0.000000e+00 845.0
62 TraesCS1B01G390800 chr5A 95.628 183 8 0 2961 3143 53235098 53235280 1.990000e-75 294.0
63 TraesCS1B01G390800 chr5A 98.333 60 1 0 3164 3223 53235277 53235336 9.990000e-19 106.0
64 TraesCS1B01G390800 chr1D 91.845 1913 99 26 5385 7278 453577633 453575759 0.000000e+00 2615.0
65 TraesCS1B01G390800 chr1D 88.123 261 16 4 4726 4979 453578365 453578113 5.520000e-76 296.0
66 TraesCS1B01G390800 chr1D 80.203 394 55 14 5501 5876 453575603 453575215 2.590000e-69 274.0
67 TraesCS1B01G390800 chr1D 79.950 399 55 16 5497 5877 453564740 453564349 3.350000e-68 270.0
68 TraesCS1B01G390800 chr1D 78.765 405 52 17 5501 5877 453556967 453556569 2.620000e-59 241.0
69 TraesCS1B01G390800 chr1D 91.339 127 10 1 5497 5622 453703665 453703539 9.710000e-39 172.0
70 TraesCS1B01G390800 chr1D 98.750 80 1 0 5317 5396 453578132 453578053 7.610000e-30 143.0
71 TraesCS1B01G390800 chr1D 86.139 101 8 1 11 105 453791317 453791217 3.590000e-18 104.0
72 TraesCS1B01G390800 chr7B 92.147 1630 116 5 1129 2758 223608290 223606673 0.000000e+00 2290.0
73 TraesCS1B01G390800 chr7B 74.652 1436 311 31 1608 3028 421062290 421063687 2.930000e-163 586.0
74 TraesCS1B01G390800 chr3B 92.025 1630 118 5 1129 2758 783646594 783644977 0.000000e+00 2279.0
75 TraesCS1B01G390800 chr3A 86.810 1304 156 10 1457 2758 738321487 738322776 0.000000e+00 1441.0
76 TraesCS1B01G390800 chr3A 84.524 420 65 0 3997 4416 738324472 738324891 4.060000e-112 416.0
77 TraesCS1B01G390800 chr6B 85.851 1357 176 9 1457 2811 46945592 46944250 0.000000e+00 1428.0
78 TraesCS1B01G390800 chr6B 85.874 1345 174 11 1457 2799 706152792 706154122 0.000000e+00 1417.0
79 TraesCS1B01G390800 chr6B 97.151 351 9 1 4978 5328 55433123 55432774 6.290000e-165 592.0
80 TraesCS1B01G390800 chr5B 86.437 1305 159 12 1457 2758 556622535 556621246 0.000000e+00 1413.0
81 TraesCS1B01G390800 chr5B 97.740 354 7 1 4975 5328 591822752 591822400 6.240000e-170 608.0
82 TraesCS1B01G390800 chr7D 78.187 1357 279 10 1457 2810 598049620 598048278 0.000000e+00 850.0
83 TraesCS1B01G390800 chr7D 91.977 349 23 4 4980 5328 567477188 567476845 1.100000e-132 484.0
84 TraesCS1B01G390800 chr2A 84.149 776 102 20 3222 3986 551470551 551471316 0.000000e+00 732.0
85 TraesCS1B01G390800 chr2A 84.314 765 102 15 3231 3986 776045306 776046061 0.000000e+00 732.0
86 TraesCS1B01G390800 chr5D 93.220 354 17 5 4976 5328 538262572 538262919 1.400000e-141 514.0
87 TraesCS1B01G390800 chr6D 91.736 363 23 7 4967 5328 22234193 22234549 1.410000e-136 497.0
88 TraesCS1B01G390800 chrUn 92.219 347 20 6 4982 5328 104804856 104804517 1.100000e-132 484.0
89 TraesCS1B01G390800 chr3D 91.573 356 22 5 4973 5328 19565588 19565241 1.100000e-132 484.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G390800 chr1B 624021185 624028463 7278 True 13442.000000 13442 100.000000 1 7279 1 chr1B.!!$R2 7278
1 TraesCS1B01G390800 chr1B 120995048 120998152 3104 False 2990.000000 5627 98.960000 129 4607 2 chr1B.!!$F4 4478
2 TraesCS1B01G390800 chr1B 653051480 653052266 786 False 1354.000000 1354 97.716000 3223 4010 1 chr1B.!!$F3 787
3 TraesCS1B01G390800 chr1B 348031170 348031772 602 True 998.000000 998 96.517000 3223 3825 1 chr1B.!!$R1 602
4 TraesCS1B01G390800 chr1B 348032217 348032755 538 False 819.000000 819 94.107000 3997 4535 1 chr1B.!!$F1 538
5 TraesCS1B01G390800 chr1B 120998149 120999166 1017 True 724.500000 1256 100.000000 3223 4007 2 chr1B.!!$R4 784
6 TraesCS1B01G390800 chr1B 120999620 121000231 611 False 723.500000 1090 98.925500 130 4606 2 chr1B.!!$F5 4476
7 TraesCS1B01G390800 chr1B 653050488 653055375 4887 True 721.500000 2791 92.726833 130 4535 6 chr1B.!!$R7 4405
8 TraesCS1B01G390800 chr1B 624028135 624028823 688 True 310.500000 364 92.551500 4408 6271 2 chr1B.!!$R6 1863
9 TraesCS1B01G390800 chr1A 549050309 549051924 1615 False 2283.000000 2283 92.086000 1129 2758 1 chr1A.!!$F3 1629
10 TraesCS1B01G390800 chr1A 11722961 11727825 4864 True 1867.500000 5653 99.039250 130 4607 4 chr1A.!!$R2 4477
11 TraesCS1B01G390800 chr1A 11723941 11724734 793 False 1404.000000 1404 98.741000 3223 4007 1 chr1A.!!$F1 784
12 TraesCS1B01G390800 chr1A 23431972 23435373 3401 True 916.000000 1421 84.767000 1457 4416 2 chr1A.!!$R3 2959
13 TraesCS1B01G390800 chr1A 548456058 548459559 3501 True 535.571429 1288 87.556143 4623 7279 7 chr1A.!!$R5 2656
14 TraesCS1B01G390800 chr1A 345338719 345340014 1295 False 497.000000 497 73.880000 1454 2760 1 chr1A.!!$F2 1306
15 TraesCS1B01G390800 chr1A 548446936 548449692 2756 True 211.333333 239 78.263000 4651 5877 3 chr1A.!!$R4 1226
16 TraesCS1B01G390800 chr4A 140792076 140792862 786 True 1365.000000 1365 97.970000 3223 4010 1 chr4A.!!$R1 787
17 TraesCS1B01G390800 chr4A 729143821 729144607 786 False 1360.000000 1360 97.843000 3223 4010 1 chr4A.!!$F1 787
18 TraesCS1B01G390800 chr4A 140788970 140793854 4884 False 719.383333 2804 91.962667 129 4535 6 chr4A.!!$F2 4406
19 TraesCS1B01G390800 chr4A 729142829 729147705 4876 True 712.000000 2760 92.141167 129 4535 6 chr4A.!!$R3 4406
20 TraesCS1B01G390800 chr5A 53235331 53236117 786 True 1360.000000 1360 97.843000 3223 4010 1 chr5A.!!$R1 787
21 TraesCS1B01G390800 chr5A 53233197 53237108 3911 False 992.000000 2723 95.349250 1090 4535 4 chr5A.!!$F1 3445
22 TraesCS1B01G390800 chr1D 453575215 453578365 3150 True 832.000000 2615 89.730250 4726 7278 4 chr1D.!!$R5 2552
23 TraesCS1B01G390800 chr7B 223606673 223608290 1617 True 2290.000000 2290 92.147000 1129 2758 1 chr7B.!!$R1 1629
24 TraesCS1B01G390800 chr7B 421062290 421063687 1397 False 586.000000 586 74.652000 1608 3028 1 chr7B.!!$F1 1420
25 TraesCS1B01G390800 chr3B 783644977 783646594 1617 True 2279.000000 2279 92.025000 1129 2758 1 chr3B.!!$R1 1629
26 TraesCS1B01G390800 chr3A 738321487 738324891 3404 False 928.500000 1441 85.667000 1457 4416 2 chr3A.!!$F1 2959
27 TraesCS1B01G390800 chr6B 46944250 46945592 1342 True 1428.000000 1428 85.851000 1457 2811 1 chr6B.!!$R1 1354
28 TraesCS1B01G390800 chr6B 706152792 706154122 1330 False 1417.000000 1417 85.874000 1457 2799 1 chr6B.!!$F1 1342
29 TraesCS1B01G390800 chr5B 556621246 556622535 1289 True 1413.000000 1413 86.437000 1457 2758 1 chr5B.!!$R1 1301
30 TraesCS1B01G390800 chr7D 598048278 598049620 1342 True 850.000000 850 78.187000 1457 2810 1 chr7D.!!$R2 1353
31 TraesCS1B01G390800 chr2A 551470551 551471316 765 False 732.000000 732 84.149000 3222 3986 1 chr2A.!!$F1 764
32 TraesCS1B01G390800 chr2A 776045306 776046061 755 False 732.000000 732 84.314000 3231 3986 1 chr2A.!!$F2 755

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
82 83 0.108945 AGGTACAGCTACGCGGTTTC 60.109 55.0 12.47 0.00 38.09 2.78 F
92 93 0.317160 ACGCGGTTTCAGATCTGTGA 59.683 50.0 21.92 9.73 0.00 3.58 F
111 112 0.318955 ATTTGCGCCAACTTCAGTGC 60.319 50.0 4.18 0.00 39.93 4.40 F
115 116 0.951040 GCGCCAACTTCAGTGCTACT 60.951 55.0 0.00 0.00 36.57 2.57 F
4607 6013 0.828022 AGTCCGGCGAATCCAACATA 59.172 50.0 9.30 0.00 34.01 2.29 F
5254 6695 0.110823 GCACAAACACCATCGTCGTC 60.111 55.0 0.00 0.00 0.00 4.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1042 1287 4.799678 CTGCAATATCCACCTCTAGTACG 58.200 47.826 0.00 0.0 0.00 3.67 R
2156 2450 5.716228 TCCCTAAAGCATTCAAACACATCAT 59.284 36.000 0.00 0.0 0.00 2.45 R
4553 5959 5.909621 TTCCTACGCTACAGTAAACTCAT 57.090 39.130 0.00 0.0 0.00 2.90 R
4612 6018 0.188342 ATTGGTGGACAGCCTGGTTT 59.812 50.000 0.00 0.0 34.31 3.27 R
5907 8279 1.001706 GTTGACCTTTTTCTCACGGGC 60.002 52.381 0.00 0.0 0.00 6.13 R
6586 9020 1.097547 CCATTGGAGGCTGCGTAAGG 61.098 60.000 0.35 0.0 38.28 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 7.108841 TGGTTCAGATAACCAGACTACATAC 57.891 40.000 5.52 0.00 44.74 2.39
29 30 9.303537 GTTCAGATAACCAGACTACATACTTTC 57.696 37.037 0.00 0.00 0.00 2.62
30 31 8.589701 TCAGATAACCAGACTACATACTTTCA 57.410 34.615 0.00 0.00 0.00 2.69
31 32 8.687242 TCAGATAACCAGACTACATACTTTCAG 58.313 37.037 0.00 0.00 0.00 3.02
32 33 7.923344 CAGATAACCAGACTACATACTTTCAGG 59.077 40.741 0.00 0.00 0.00 3.86
33 34 7.620094 AGATAACCAGACTACATACTTTCAGGT 59.380 37.037 0.00 0.00 29.67 4.00
34 35 6.435292 AACCAGACTACATACTTTCAGGTT 57.565 37.500 0.00 0.00 34.13 3.50
37 38 6.495872 ACCAGACTACATACTTTCAGGTTGTA 59.504 38.462 0.00 0.00 0.00 2.41
39 40 6.531948 CAGACTACATACTTTCAGGTTGTAGC 59.468 42.308 7.99 2.85 42.10 3.58
40 41 6.437793 AGACTACATACTTTCAGGTTGTAGCT 59.562 38.462 7.99 0.00 42.10 3.32
41 42 6.398918 ACTACATACTTTCAGGTTGTAGCTG 58.601 40.000 0.00 0.00 44.57 4.24
44 45 2.851195 ACTTTCAGGTTGTAGCTGGTG 58.149 47.619 0.00 0.76 43.47 4.17
46 47 2.543777 TTCAGGTTGTAGCTGGTGTC 57.456 50.000 0.00 0.00 43.47 3.67
48 49 1.344438 TCAGGTTGTAGCTGGTGTCTG 59.656 52.381 0.00 0.00 43.47 3.51
52 53 1.801178 GTTGTAGCTGGTGTCTGAAGC 59.199 52.381 0.00 0.00 37.20 3.86
54 55 0.321671 GTAGCTGGTGTCTGAAGCCA 59.678 55.000 0.00 2.20 37.68 4.75
55 56 1.055849 TAGCTGGTGTCTGAAGCCAA 58.944 50.000 0.00 0.00 37.68 4.52
56 57 0.536006 AGCTGGTGTCTGAAGCCAAC 60.536 55.000 0.00 0.00 37.68 3.77
57 58 1.845809 GCTGGTGTCTGAAGCCAACG 61.846 60.000 3.57 0.00 0.00 4.10
58 59 1.845809 CTGGTGTCTGAAGCCAACGC 61.846 60.000 3.57 0.00 0.00 4.84
70 71 2.094659 CCAACGCTGCGAGGTACAG 61.095 63.158 30.47 9.23 38.22 2.74
75 76 4.692129 CTGCGAGGTACAGCTACG 57.308 61.111 8.33 0.00 0.00 3.51
77 78 2.651232 GCGAGGTACAGCTACGCG 60.651 66.667 3.53 3.53 39.90 6.01
78 79 2.024305 CGAGGTACAGCTACGCGG 59.976 66.667 12.47 0.00 0.00 6.46
79 80 2.758089 CGAGGTACAGCTACGCGGT 61.758 63.158 12.47 0.00 40.45 5.68
82 83 0.108945 AGGTACAGCTACGCGGTTTC 60.109 55.000 12.47 0.00 38.09 2.78
84 85 0.989890 GTACAGCTACGCGGTTTCAG 59.010 55.000 12.47 0.00 38.09 3.02
85 86 0.883153 TACAGCTACGCGGTTTCAGA 59.117 50.000 12.47 0.00 38.09 3.27
87 88 0.924090 CAGCTACGCGGTTTCAGATC 59.076 55.000 12.47 0.00 0.00 2.75
89 90 0.924090 GCTACGCGGTTTCAGATCTG 59.076 55.000 17.07 17.07 0.00 2.90
91 92 1.920574 CTACGCGGTTTCAGATCTGTG 59.079 52.381 21.92 5.12 0.00 3.66
92 93 0.317160 ACGCGGTTTCAGATCTGTGA 59.683 50.000 21.92 9.73 0.00 3.58
93 94 1.066858 ACGCGGTTTCAGATCTGTGAT 60.067 47.619 21.92 0.00 0.00 3.06
94 95 2.002586 CGCGGTTTCAGATCTGTGATT 58.997 47.619 21.92 0.00 0.00 2.57
96 97 3.725895 CGCGGTTTCAGATCTGTGATTTG 60.726 47.826 21.92 10.19 0.00 2.32
97 98 3.751621 CGGTTTCAGATCTGTGATTTGC 58.248 45.455 21.92 7.03 0.00 3.68
99 100 3.166657 GTTTCAGATCTGTGATTTGCGC 58.833 45.455 21.92 0.00 0.00 6.09
101 102 1.089112 CAGATCTGTGATTTGCGCCA 58.911 50.000 14.95 0.00 0.00 5.69
102 103 1.469703 CAGATCTGTGATTTGCGCCAA 59.530 47.619 14.95 0.00 0.00 4.52
103 104 1.470098 AGATCTGTGATTTGCGCCAAC 59.530 47.619 4.18 0.00 0.00 3.77
104 105 1.470098 GATCTGTGATTTGCGCCAACT 59.530 47.619 4.18 0.00 0.00 3.16
106 107 1.266718 TCTGTGATTTGCGCCAACTTC 59.733 47.619 4.18 0.00 0.00 3.01
108 109 1.001487 TGTGATTTGCGCCAACTTCAG 60.001 47.619 4.18 0.00 0.00 3.02
109 110 1.001378 GTGATTTGCGCCAACTTCAGT 60.001 47.619 4.18 0.00 0.00 3.41
111 112 0.318955 ATTTGCGCCAACTTCAGTGC 60.319 50.000 4.18 0.00 39.93 4.40
114 115 1.227999 TGCGCCAACTTCAGTGCTAC 61.228 55.000 4.18 0.00 40.18 3.58
115 116 0.951040 GCGCCAACTTCAGTGCTACT 60.951 55.000 0.00 0.00 36.57 2.57
118 119 1.543429 GCCAACTTCAGTGCTACTGGT 60.543 52.381 13.87 5.01 45.94 4.00
122 123 4.262463 CCAACTTCAGTGCTACTGGTCTAA 60.262 45.833 13.87 3.47 45.94 2.10
127 128 6.267014 ACTTCAGTGCTACTGGTCTAAGTAAA 59.733 38.462 13.87 1.07 45.94 2.01
1042 1287 7.012044 ACACTAACTGTGGTGTTTACTCATTTC 59.988 37.037 12.08 0.00 46.37 2.17
4553 5959 5.667626 AGTCCATAGCCTTCCATTTCTCTTA 59.332 40.000 0.00 0.00 0.00 2.10
4607 6013 0.828022 AGTCCGGCGAATCCAACATA 59.172 50.000 9.30 0.00 34.01 2.29
4608 6014 1.208535 AGTCCGGCGAATCCAACATAA 59.791 47.619 9.30 0.00 34.01 1.90
4609 6015 2.011222 GTCCGGCGAATCCAACATAAA 58.989 47.619 9.30 0.00 34.01 1.40
4610 6016 2.420722 GTCCGGCGAATCCAACATAAAA 59.579 45.455 9.30 0.00 34.01 1.52
4611 6017 3.066203 GTCCGGCGAATCCAACATAAAAT 59.934 43.478 9.30 0.00 34.01 1.82
4612 6018 4.273969 GTCCGGCGAATCCAACATAAAATA 59.726 41.667 9.30 0.00 34.01 1.40
4613 6019 4.882427 TCCGGCGAATCCAACATAAAATAA 59.118 37.500 9.30 0.00 34.01 1.40
4614 6020 5.357314 TCCGGCGAATCCAACATAAAATAAA 59.643 36.000 9.30 0.00 34.01 1.40
4615 6021 5.457473 CCGGCGAATCCAACATAAAATAAAC 59.543 40.000 9.30 0.00 34.01 2.01
4616 6022 5.457473 CGGCGAATCCAACATAAAATAAACC 59.543 40.000 0.00 0.00 34.01 3.27
4617 6023 6.334202 GGCGAATCCAACATAAAATAAACCA 58.666 36.000 0.00 0.00 34.01 3.67
4618 6024 6.475402 GGCGAATCCAACATAAAATAAACCAG 59.525 38.462 0.00 0.00 34.01 4.00
4619 6025 6.475402 GCGAATCCAACATAAAATAAACCAGG 59.525 38.462 0.00 0.00 0.00 4.45
4620 6026 6.475402 CGAATCCAACATAAAATAAACCAGGC 59.525 38.462 0.00 0.00 0.00 4.85
4621 6027 7.494922 AATCCAACATAAAATAAACCAGGCT 57.505 32.000 0.00 0.00 0.00 4.58
4622 6028 6.279513 TCCAACATAAAATAAACCAGGCTG 57.720 37.500 7.75 7.75 0.00 4.85
4623 6029 5.777732 TCCAACATAAAATAAACCAGGCTGT 59.222 36.000 14.43 0.00 0.00 4.40
4624 6030 6.071616 TCCAACATAAAATAAACCAGGCTGTC 60.072 38.462 14.43 0.00 0.00 3.51
4625 6031 5.914898 ACATAAAATAAACCAGGCTGTCC 57.085 39.130 14.43 0.00 0.00 4.02
4626 6032 5.329399 ACATAAAATAAACCAGGCTGTCCA 58.671 37.500 14.43 0.00 33.74 4.02
4653 6059 6.727824 ATTAACTAGCACAAGTACAGCAAG 57.272 37.500 0.00 0.00 0.00 4.01
4688 6094 1.605710 GGACATGAATCATGGGCGAAG 59.394 52.381 24.99 0.85 45.16 3.79
4779 6191 5.334182 GCCGACCTTTGAGTAAGAAAAGAAG 60.334 44.000 0.00 0.00 35.79 2.85
4814 6235 6.183360 GGGACCATACTAATTTGCACTAAACC 60.183 42.308 0.00 0.00 0.00 3.27
4883 6304 3.530067 GGCATCCATCAAGGCCAC 58.470 61.111 5.01 0.00 45.70 5.01
4888 6309 2.809665 GCATCCATCAAGGCCACTCTAG 60.810 54.545 5.01 0.00 37.29 2.43
4907 6337 1.074566 AGGCAAGAGGGGTTTCTGAAG 59.925 52.381 0.00 0.00 0.00 3.02
4921 6351 4.530094 TTCTGAAGTGTTGTTACTTGCG 57.470 40.909 0.00 0.00 40.78 4.85
4933 6363 0.746563 TACTTGCGGCATAACAGGGC 60.747 55.000 2.28 0.00 0.00 5.19
4973 6414 5.119125 CGTTTCTGAAAATGCCCTTCAATTC 59.881 40.000 4.09 0.00 32.57 2.17
4974 6415 6.226052 GTTTCTGAAAATGCCCTTCAATTCT 58.774 36.000 4.09 0.00 32.57 2.40
4975 6416 6.423776 TTCTGAAAATGCCCTTCAATTCTT 57.576 33.333 0.00 0.00 32.57 2.52
4976 6417 6.029346 TCTGAAAATGCCCTTCAATTCTTC 57.971 37.500 0.00 0.00 32.57 2.87
4977 6418 5.539574 TCTGAAAATGCCCTTCAATTCTTCA 59.460 36.000 0.00 0.00 32.57 3.02
4978 6419 6.211986 TCTGAAAATGCCCTTCAATTCTTCAT 59.788 34.615 0.00 0.00 32.57 2.57
4979 6420 6.771573 TGAAAATGCCCTTCAATTCTTCATT 58.228 32.000 0.00 0.00 29.93 2.57
4980 6421 7.225725 TGAAAATGCCCTTCAATTCTTCATTT 58.774 30.769 0.00 0.00 35.11 2.32
4981 6422 7.720515 TGAAAATGCCCTTCAATTCTTCATTTT 59.279 29.630 9.02 9.02 42.03 1.82
4982 6423 8.467963 AAAATGCCCTTCAATTCTTCATTTTT 57.532 26.923 0.00 0.00 38.63 1.94
5030 6471 9.520515 AATATCAAGATGATACCAATTACACCC 57.479 33.333 2.36 0.00 41.62 4.61
5031 6472 6.320434 TCAAGATGATACCAATTACACCCA 57.680 37.500 0.00 0.00 0.00 4.51
5032 6473 6.356556 TCAAGATGATACCAATTACACCCAG 58.643 40.000 0.00 0.00 0.00 4.45
5033 6474 4.718961 AGATGATACCAATTACACCCAGC 58.281 43.478 0.00 0.00 0.00 4.85
5034 6475 3.290948 TGATACCAATTACACCCAGCC 57.709 47.619 0.00 0.00 0.00 4.85
5035 6476 2.849943 TGATACCAATTACACCCAGCCT 59.150 45.455 0.00 0.00 0.00 4.58
5036 6477 3.118038 TGATACCAATTACACCCAGCCTC 60.118 47.826 0.00 0.00 0.00 4.70
5037 6478 1.372501 ACCAATTACACCCAGCCTCT 58.627 50.000 0.00 0.00 0.00 3.69
5038 6479 1.004745 ACCAATTACACCCAGCCTCTG 59.995 52.381 0.00 0.00 0.00 3.35
5039 6480 1.098050 CAATTACACCCAGCCTCTGC 58.902 55.000 0.00 0.00 37.95 4.26
5040 6481 0.698238 AATTACACCCAGCCTCTGCA 59.302 50.000 0.00 0.00 41.13 4.41
5041 6482 0.698238 ATTACACCCAGCCTCTGCAA 59.302 50.000 0.00 0.00 41.13 4.08
5042 6483 0.250727 TTACACCCAGCCTCTGCAAC 60.251 55.000 0.00 0.00 41.13 4.17
5043 6484 1.414866 TACACCCAGCCTCTGCAACA 61.415 55.000 0.00 0.00 41.13 3.33
5044 6485 1.529010 CACCCAGCCTCTGCAACAA 60.529 57.895 0.00 0.00 41.13 2.83
5045 6486 1.529244 ACCCAGCCTCTGCAACAAC 60.529 57.895 0.00 0.00 41.13 3.32
5046 6487 1.529010 CCCAGCCTCTGCAACAACA 60.529 57.895 0.00 0.00 41.13 3.33
5047 6488 0.896940 CCCAGCCTCTGCAACAACAT 60.897 55.000 0.00 0.00 41.13 2.71
5048 6489 1.614051 CCCAGCCTCTGCAACAACATA 60.614 52.381 0.00 0.00 41.13 2.29
5049 6490 2.161855 CCAGCCTCTGCAACAACATAA 58.838 47.619 0.00 0.00 41.13 1.90
5050 6491 2.756760 CCAGCCTCTGCAACAACATAAT 59.243 45.455 0.00 0.00 41.13 1.28
5051 6492 3.947196 CCAGCCTCTGCAACAACATAATA 59.053 43.478 0.00 0.00 41.13 0.98
5052 6493 4.581824 CCAGCCTCTGCAACAACATAATAT 59.418 41.667 0.00 0.00 41.13 1.28
5053 6494 5.278169 CCAGCCTCTGCAACAACATAATATC 60.278 44.000 0.00 0.00 41.13 1.63
5054 6495 4.823989 AGCCTCTGCAACAACATAATATCC 59.176 41.667 0.00 0.00 41.13 2.59
5055 6496 4.580167 GCCTCTGCAACAACATAATATCCA 59.420 41.667 0.00 0.00 37.47 3.41
5056 6497 5.278169 GCCTCTGCAACAACATAATATCCAG 60.278 44.000 0.00 0.00 37.47 3.86
5057 6498 6.057533 CCTCTGCAACAACATAATATCCAGA 58.942 40.000 0.00 0.00 0.00 3.86
5058 6499 6.713903 CCTCTGCAACAACATAATATCCAGAT 59.286 38.462 0.00 0.00 0.00 2.90
5059 6500 7.094890 CCTCTGCAACAACATAATATCCAGATC 60.095 40.741 0.00 0.00 0.00 2.75
5060 6501 7.281841 TCTGCAACAACATAATATCCAGATCA 58.718 34.615 0.00 0.00 0.00 2.92
5061 6502 7.774625 TCTGCAACAACATAATATCCAGATCAA 59.225 33.333 0.00 0.00 0.00 2.57
5062 6503 7.933396 TGCAACAACATAATATCCAGATCAAG 58.067 34.615 0.00 0.00 0.00 3.02
5063 6504 7.557358 TGCAACAACATAATATCCAGATCAAGT 59.443 33.333 0.00 0.00 0.00 3.16
5064 6505 8.072567 GCAACAACATAATATCCAGATCAAGTC 58.927 37.037 0.00 0.00 0.00 3.01
5065 6506 9.334947 CAACAACATAATATCCAGATCAAGTCT 57.665 33.333 0.00 0.00 37.80 3.24
5070 6511 9.593565 ACATAATATCCAGATCAAGTCTAGACA 57.406 33.333 24.44 4.70 34.69 3.41
5073 6514 8.718158 AATATCCAGATCAAGTCTAGACATCA 57.282 34.615 24.44 0.00 34.69 3.07
5074 6515 8.898303 ATATCCAGATCAAGTCTAGACATCAT 57.102 34.615 24.44 4.73 34.69 2.45
5075 6516 6.402456 TCCAGATCAAGTCTAGACATCATG 57.598 41.667 24.44 16.25 34.69 3.07
5076 6517 5.303845 TCCAGATCAAGTCTAGACATCATGG 59.696 44.000 24.44 21.67 34.69 3.66
5077 6518 5.303845 CCAGATCAAGTCTAGACATCATGGA 59.696 44.000 24.44 7.48 34.69 3.41
5078 6519 6.014413 CCAGATCAAGTCTAGACATCATGGAT 60.014 42.308 24.44 11.92 34.69 3.41
5079 6520 6.869388 CAGATCAAGTCTAGACATCATGGATG 59.131 42.308 24.44 8.93 39.54 3.51
5080 6521 4.953667 TCAAGTCTAGACATCATGGATGC 58.046 43.478 24.44 0.38 43.15 3.91
5081 6522 4.406649 TCAAGTCTAGACATCATGGATGCA 59.593 41.667 24.44 0.00 43.15 3.96
5082 6523 4.333913 AGTCTAGACATCATGGATGCAC 57.666 45.455 24.44 1.88 43.15 4.57
5083 6524 3.708121 AGTCTAGACATCATGGATGCACA 59.292 43.478 24.44 0.00 43.15 4.57
5084 6525 3.806521 GTCTAGACATCATGGATGCACAC 59.193 47.826 18.20 0.00 43.15 3.82
5085 6526 2.793288 AGACATCATGGATGCACACA 57.207 45.000 6.15 0.00 43.15 3.72
5086 6527 2.640184 AGACATCATGGATGCACACAG 58.360 47.619 6.15 0.00 43.15 3.66
5087 6528 1.065102 GACATCATGGATGCACACAGC 59.935 52.381 6.15 0.00 43.15 4.40
5132 6573 5.993748 AAAGAAAACAAAGTCCCAGTTGA 57.006 34.783 0.00 0.00 0.00 3.18
5133 6574 5.993748 AAGAAAACAAAGTCCCAGTTGAA 57.006 34.783 0.00 0.00 0.00 2.69
5134 6575 5.993748 AGAAAACAAAGTCCCAGTTGAAA 57.006 34.783 0.00 0.00 0.00 2.69
5135 6576 5.720202 AGAAAACAAAGTCCCAGTTGAAAC 58.280 37.500 0.00 0.00 0.00 2.78
5136 6577 5.245075 AGAAAACAAAGTCCCAGTTGAAACA 59.755 36.000 0.00 0.00 0.00 2.83
5137 6578 5.476091 AAACAAAGTCCCAGTTGAAACAA 57.524 34.783 0.00 0.00 0.00 2.83
5138 6579 5.476091 AACAAAGTCCCAGTTGAAACAAA 57.524 34.783 0.00 0.00 0.00 2.83
5139 6580 5.072040 ACAAAGTCCCAGTTGAAACAAAG 57.928 39.130 0.00 0.00 0.00 2.77
5140 6581 4.770010 ACAAAGTCCCAGTTGAAACAAAGA 59.230 37.500 0.00 0.00 0.00 2.52
5141 6582 5.105756 ACAAAGTCCCAGTTGAAACAAAGAG 60.106 40.000 0.00 0.00 0.00 2.85
5142 6583 4.503714 AGTCCCAGTTGAAACAAAGAGA 57.496 40.909 0.00 0.00 0.00 3.10
5143 6584 4.455606 AGTCCCAGTTGAAACAAAGAGAG 58.544 43.478 0.00 0.00 0.00 3.20
5144 6585 3.565902 GTCCCAGTTGAAACAAAGAGAGG 59.434 47.826 0.00 0.00 0.00 3.69
5145 6586 2.294512 CCCAGTTGAAACAAAGAGAGGC 59.705 50.000 0.00 0.00 0.00 4.70
5146 6587 3.217626 CCAGTTGAAACAAAGAGAGGCT 58.782 45.455 0.00 0.00 0.00 4.58
5147 6588 3.633986 CCAGTTGAAACAAAGAGAGGCTT 59.366 43.478 0.00 0.00 38.88 4.35
5148 6589 4.498682 CCAGTTGAAACAAAGAGAGGCTTG 60.499 45.833 0.00 0.00 36.80 4.01
5149 6590 3.067320 AGTTGAAACAAAGAGAGGCTTGC 59.933 43.478 0.00 0.00 36.80 4.01
5150 6591 2.653726 TGAAACAAAGAGAGGCTTGCA 58.346 42.857 0.00 0.00 36.80 4.08
5151 6592 2.620115 TGAAACAAAGAGAGGCTTGCAG 59.380 45.455 0.00 0.00 36.80 4.41
5152 6593 0.957362 AACAAAGAGAGGCTTGCAGC 59.043 50.000 0.00 0.11 41.46 5.25
5153 6594 0.179009 ACAAAGAGAGGCTTGCAGCA 60.179 50.000 9.78 0.00 44.75 4.41
5154 6595 0.522180 CAAAGAGAGGCTTGCAGCAG 59.478 55.000 9.78 0.00 44.75 4.24
5155 6596 1.242665 AAAGAGAGGCTTGCAGCAGC 61.243 55.000 1.52 1.52 44.75 5.25
5165 6606 3.036577 GCAGCAGCAAGAGCACAA 58.963 55.556 0.00 0.00 45.49 3.33
5166 6607 1.371389 GCAGCAGCAAGAGCACAAC 60.371 57.895 0.00 0.00 45.49 3.32
5167 6608 1.285023 CAGCAGCAAGAGCACAACC 59.715 57.895 0.00 0.00 45.49 3.77
5168 6609 1.152902 AGCAGCAAGAGCACAACCA 60.153 52.632 0.00 0.00 45.49 3.67
5169 6610 1.170919 AGCAGCAAGAGCACAACCAG 61.171 55.000 0.00 0.00 45.49 4.00
5170 6611 1.450531 GCAGCAAGAGCACAACCAGT 61.451 55.000 0.00 0.00 45.49 4.00
5191 6632 1.972198 TGGCAACACCTAGACTCCG 59.028 57.895 0.00 0.00 46.17 4.63
5192 6633 0.541063 TGGCAACACCTAGACTCCGA 60.541 55.000 0.00 0.00 46.17 4.55
5193 6634 0.606604 GGCAACACCTAGACTCCGAA 59.393 55.000 0.00 0.00 34.51 4.30
5194 6635 1.001633 GGCAACACCTAGACTCCGAAA 59.998 52.381 0.00 0.00 34.51 3.46
5195 6636 2.549349 GGCAACACCTAGACTCCGAAAA 60.549 50.000 0.00 0.00 34.51 2.29
5196 6637 3.135994 GCAACACCTAGACTCCGAAAAA 58.864 45.455 0.00 0.00 0.00 1.94
5197 6638 3.186613 GCAACACCTAGACTCCGAAAAAG 59.813 47.826 0.00 0.00 0.00 2.27
5198 6639 4.628074 CAACACCTAGACTCCGAAAAAGA 58.372 43.478 0.00 0.00 0.00 2.52
5199 6640 5.238583 CAACACCTAGACTCCGAAAAAGAT 58.761 41.667 0.00 0.00 0.00 2.40
5200 6641 5.485209 ACACCTAGACTCCGAAAAAGATT 57.515 39.130 0.00 0.00 0.00 2.40
5201 6642 5.480205 ACACCTAGACTCCGAAAAAGATTC 58.520 41.667 0.00 0.00 0.00 2.52
5202 6643 5.246429 ACACCTAGACTCCGAAAAAGATTCT 59.754 40.000 0.00 0.00 0.00 2.40
5203 6644 5.808030 CACCTAGACTCCGAAAAAGATTCTC 59.192 44.000 0.00 0.00 0.00 2.87
5204 6645 5.105269 ACCTAGACTCCGAAAAAGATTCTCC 60.105 44.000 0.00 0.00 0.00 3.71
5205 6646 4.891992 AGACTCCGAAAAAGATTCTCCA 57.108 40.909 0.00 0.00 0.00 3.86
5206 6647 5.228945 AGACTCCGAAAAAGATTCTCCAA 57.771 39.130 0.00 0.00 0.00 3.53
5207 6648 5.621193 AGACTCCGAAAAAGATTCTCCAAA 58.379 37.500 0.00 0.00 0.00 3.28
5208 6649 6.062095 AGACTCCGAAAAAGATTCTCCAAAA 58.938 36.000 0.00 0.00 0.00 2.44
5209 6650 6.546034 AGACTCCGAAAAAGATTCTCCAAAAA 59.454 34.615 0.00 0.00 0.00 1.94
5210 6651 6.504398 ACTCCGAAAAAGATTCTCCAAAAAC 58.496 36.000 0.00 0.00 0.00 2.43
5211 6652 5.516090 TCCGAAAAAGATTCTCCAAAAACG 58.484 37.500 0.00 0.00 0.00 3.60
5212 6653 5.297278 TCCGAAAAAGATTCTCCAAAAACGA 59.703 36.000 0.00 0.00 0.00 3.85
5213 6654 5.974751 CCGAAAAAGATTCTCCAAAAACGAA 59.025 36.000 0.00 0.00 0.00 3.85
5214 6655 6.075046 CCGAAAAAGATTCTCCAAAAACGAAC 60.075 38.462 0.00 0.00 0.00 3.95
5215 6656 6.343924 CGAAAAAGATTCTCCAAAAACGAACG 60.344 38.462 0.00 0.00 0.00 3.95
5216 6657 3.537793 AGATTCTCCAAAAACGAACGC 57.462 42.857 0.00 0.00 0.00 4.84
5217 6658 2.225727 AGATTCTCCAAAAACGAACGCC 59.774 45.455 0.00 0.00 0.00 5.68
5218 6659 1.670791 TTCTCCAAAAACGAACGCCT 58.329 45.000 0.00 0.00 0.00 5.52
5219 6660 1.670791 TCTCCAAAAACGAACGCCTT 58.329 45.000 0.00 0.00 0.00 4.35
5220 6661 1.600485 TCTCCAAAAACGAACGCCTTC 59.400 47.619 0.00 0.00 0.00 3.46
5221 6662 1.332375 CTCCAAAAACGAACGCCTTCA 59.668 47.619 0.00 0.00 0.00 3.02
5222 6663 1.743958 TCCAAAAACGAACGCCTTCAA 59.256 42.857 0.00 0.00 0.00 2.69
5223 6664 2.116366 CCAAAAACGAACGCCTTCAAG 58.884 47.619 0.00 0.00 0.00 3.02
5224 6665 2.223386 CCAAAAACGAACGCCTTCAAGA 60.223 45.455 0.00 0.00 0.00 3.02
5225 6666 3.430931 CAAAAACGAACGCCTTCAAGAA 58.569 40.909 0.00 0.00 0.00 2.52
5226 6667 3.334272 AAAACGAACGCCTTCAAGAAG 57.666 42.857 2.83 2.83 38.14 2.85
5240 6681 6.801539 CTTCAAGAAGGTTATAGTGCACAA 57.198 37.500 21.04 1.11 34.87 3.33
5241 6682 7.202016 CTTCAAGAAGGTTATAGTGCACAAA 57.798 36.000 21.04 7.03 34.87 2.83
5242 6683 6.554334 TCAAGAAGGTTATAGTGCACAAAC 57.446 37.500 21.04 18.48 0.00 2.93
5243 6684 6.058833 TCAAGAAGGTTATAGTGCACAAACA 58.941 36.000 21.04 0.88 0.00 2.83
5244 6685 5.941948 AGAAGGTTATAGTGCACAAACAC 57.058 39.130 21.04 9.98 41.02 3.32
5245 6686 4.760204 AGAAGGTTATAGTGCACAAACACC 59.240 41.667 21.04 18.31 41.67 4.16
5246 6687 4.093472 AGGTTATAGTGCACAAACACCA 57.907 40.909 21.04 0.00 41.67 4.17
5247 6688 4.662278 AGGTTATAGTGCACAAACACCAT 58.338 39.130 21.04 6.95 41.67 3.55
5248 6689 4.700213 AGGTTATAGTGCACAAACACCATC 59.300 41.667 21.04 7.12 41.67 3.51
5249 6690 4.436852 GGTTATAGTGCACAAACACCATCG 60.437 45.833 21.04 0.00 41.67 3.84
5250 6691 2.248280 TAGTGCACAAACACCATCGT 57.752 45.000 21.04 0.00 41.67 3.73
5251 6692 0.944386 AGTGCACAAACACCATCGTC 59.056 50.000 21.04 0.00 41.67 4.20
5252 6693 0.384230 GTGCACAAACACCATCGTCG 60.384 55.000 13.17 0.00 34.35 5.12
5253 6694 0.812014 TGCACAAACACCATCGTCGT 60.812 50.000 0.00 0.00 0.00 4.34
5254 6695 0.110823 GCACAAACACCATCGTCGTC 60.111 55.000 0.00 0.00 0.00 4.20
5255 6696 0.511221 CACAAACACCATCGTCGTCC 59.489 55.000 0.00 0.00 0.00 4.79
5256 6697 0.942410 ACAAACACCATCGTCGTCCG 60.942 55.000 0.00 0.00 38.13 4.79
5257 6698 1.373748 AAACACCATCGTCGTCCGG 60.374 57.895 0.00 0.00 37.11 5.14
5258 6699 2.091102 AAACACCATCGTCGTCCGGT 62.091 55.000 0.00 0.00 37.11 5.28
5259 6700 2.202570 CACCATCGTCGTCCGGTC 60.203 66.667 0.00 0.00 37.11 4.79
5260 6701 3.446570 ACCATCGTCGTCCGGTCC 61.447 66.667 0.00 0.00 37.11 4.46
5261 6702 3.445687 CCATCGTCGTCCGGTCCA 61.446 66.667 0.00 0.00 37.11 4.02
5262 6703 2.569657 CATCGTCGTCCGGTCCAA 59.430 61.111 0.00 0.00 37.11 3.53
5263 6704 1.804326 CATCGTCGTCCGGTCCAAC 60.804 63.158 0.00 0.00 37.11 3.77
5264 6705 2.998279 ATCGTCGTCCGGTCCAACC 61.998 63.158 0.00 0.00 37.11 3.77
5265 6706 3.980989 CGTCGTCCGGTCCAACCA 61.981 66.667 0.00 0.00 38.47 3.67
5266 6707 2.660802 GTCGTCCGGTCCAACCAT 59.339 61.111 0.00 0.00 38.47 3.55
5267 6708 1.447314 GTCGTCCGGTCCAACCATC 60.447 63.158 0.00 0.00 38.47 3.51
5268 6709 1.909287 TCGTCCGGTCCAACCATCA 60.909 57.895 0.00 0.00 38.47 3.07
5269 6710 1.220749 CGTCCGGTCCAACCATCAT 59.779 57.895 0.00 0.00 38.47 2.45
5270 6711 0.462375 CGTCCGGTCCAACCATCATA 59.538 55.000 0.00 0.00 38.47 2.15
5271 6712 1.538204 CGTCCGGTCCAACCATCATAG 60.538 57.143 0.00 0.00 38.47 2.23
5272 6713 1.485066 GTCCGGTCCAACCATCATAGT 59.515 52.381 0.00 0.00 38.47 2.12
5273 6714 1.760613 TCCGGTCCAACCATCATAGTC 59.239 52.381 0.00 0.00 38.47 2.59
5274 6715 1.484653 CCGGTCCAACCATCATAGTCA 59.515 52.381 0.00 0.00 38.47 3.41
5275 6716 2.483714 CCGGTCCAACCATCATAGTCAG 60.484 54.545 0.00 0.00 38.47 3.51
5276 6717 2.430694 CGGTCCAACCATCATAGTCAGA 59.569 50.000 0.00 0.00 38.47 3.27
5277 6718 3.070159 CGGTCCAACCATCATAGTCAGAT 59.930 47.826 0.00 0.00 38.47 2.90
5278 6719 4.636249 GGTCCAACCATCATAGTCAGATC 58.364 47.826 0.00 0.00 38.42 2.75
5279 6720 4.503991 GGTCCAACCATCATAGTCAGATCC 60.504 50.000 0.00 0.00 38.42 3.36
5280 6721 4.346418 GTCCAACCATCATAGTCAGATCCT 59.654 45.833 0.00 0.00 0.00 3.24
5281 6722 4.346127 TCCAACCATCATAGTCAGATCCTG 59.654 45.833 0.00 0.00 0.00 3.86
5282 6723 4.504514 CCAACCATCATAGTCAGATCCTGG 60.505 50.000 0.00 0.00 31.51 4.45
5283 6724 3.246301 ACCATCATAGTCAGATCCTGGG 58.754 50.000 0.00 0.00 31.51 4.45
5284 6725 3.246301 CCATCATAGTCAGATCCTGGGT 58.754 50.000 0.00 0.00 31.51 4.51
5285 6726 3.649981 CCATCATAGTCAGATCCTGGGTT 59.350 47.826 0.00 0.00 31.51 4.11
5286 6727 4.103785 CCATCATAGTCAGATCCTGGGTTT 59.896 45.833 0.00 0.00 31.51 3.27
5287 6728 5.398353 CCATCATAGTCAGATCCTGGGTTTT 60.398 44.000 0.00 0.00 31.51 2.43
5288 6729 5.359194 TCATAGTCAGATCCTGGGTTTTC 57.641 43.478 0.00 0.00 31.51 2.29
5289 6730 4.782691 TCATAGTCAGATCCTGGGTTTTCA 59.217 41.667 0.00 0.00 31.51 2.69
5290 6731 3.425162 AGTCAGATCCTGGGTTTTCAC 57.575 47.619 0.00 0.00 31.51 3.18
5291 6732 2.040412 AGTCAGATCCTGGGTTTTCACC 59.960 50.000 0.00 0.00 43.37 4.02
5301 6742 1.911057 GGTTTTCACCCTGGAGAAGG 58.089 55.000 0.00 0.00 46.94 3.46
5302 6743 1.145119 GGTTTTCACCCTGGAGAAGGT 59.855 52.381 0.00 0.00 45.78 3.50
5303 6744 2.505405 GTTTTCACCCTGGAGAAGGTC 58.495 52.381 0.00 0.00 45.78 3.85
5304 6745 1.064825 TTTCACCCTGGAGAAGGTCC 58.935 55.000 0.00 0.00 45.78 4.46
5316 6757 4.021102 GAGAAGGTCCAATCTCCAAACA 57.979 45.455 11.79 0.00 36.83 2.83
5317 6758 4.398319 GAGAAGGTCCAATCTCCAAACAA 58.602 43.478 11.79 0.00 36.83 2.83
5318 6759 5.003096 AGAAGGTCCAATCTCCAAACAAT 57.997 39.130 0.00 0.00 0.00 2.71
5319 6760 4.768968 AGAAGGTCCAATCTCCAAACAATG 59.231 41.667 0.00 0.00 0.00 2.82
5320 6761 2.827921 AGGTCCAATCTCCAAACAATGC 59.172 45.455 0.00 0.00 0.00 3.56
5321 6762 2.094026 GGTCCAATCTCCAAACAATGCC 60.094 50.000 0.00 0.00 0.00 4.40
5322 6763 2.094026 GTCCAATCTCCAAACAATGCCC 60.094 50.000 0.00 0.00 0.00 5.36
5323 6764 2.181975 CCAATCTCCAAACAATGCCCT 58.818 47.619 0.00 0.00 0.00 5.19
5324 6765 2.568509 CCAATCTCCAAACAATGCCCTT 59.431 45.455 0.00 0.00 0.00 3.95
5325 6766 3.368739 CCAATCTCCAAACAATGCCCTTC 60.369 47.826 0.00 0.00 0.00 3.46
5326 6767 2.673775 TCTCCAAACAATGCCCTTCA 57.326 45.000 0.00 0.00 0.00 3.02
5327 6768 2.956132 TCTCCAAACAATGCCCTTCAA 58.044 42.857 0.00 0.00 0.00 2.69
5328 6769 3.509442 TCTCCAAACAATGCCCTTCAAT 58.491 40.909 0.00 0.00 0.00 2.57
5329 6770 3.903090 TCTCCAAACAATGCCCTTCAATT 59.097 39.130 0.00 0.00 0.00 2.32
5330 6771 4.021192 TCTCCAAACAATGCCCTTCAATTC 60.021 41.667 0.00 0.00 0.00 2.17
5331 6772 3.903090 TCCAAACAATGCCCTTCAATTCT 59.097 39.130 0.00 0.00 0.00 2.40
5332 6773 4.347583 TCCAAACAATGCCCTTCAATTCTT 59.652 37.500 0.00 0.00 0.00 2.52
5333 6774 4.692155 CCAAACAATGCCCTTCAATTCTTC 59.308 41.667 0.00 0.00 0.00 2.87
5334 6775 5.299148 CAAACAATGCCCTTCAATTCTTCA 58.701 37.500 0.00 0.00 0.00 3.02
5335 6776 5.750352 AACAATGCCCTTCAATTCTTCAT 57.250 34.783 0.00 0.00 0.00 2.57
5336 6777 6.855763 AACAATGCCCTTCAATTCTTCATA 57.144 33.333 0.00 0.00 0.00 2.15
5337 6778 6.461110 ACAATGCCCTTCAATTCTTCATAG 57.539 37.500 0.00 0.00 0.00 2.23
5338 6779 5.361857 ACAATGCCCTTCAATTCTTCATAGG 59.638 40.000 0.00 0.00 0.00 2.57
5339 6780 4.591321 TGCCCTTCAATTCTTCATAGGT 57.409 40.909 0.00 0.00 0.00 3.08
5340 6781 4.934356 TGCCCTTCAATTCTTCATAGGTT 58.066 39.130 0.00 0.00 0.00 3.50
5396 6837 7.581213 TGCAACTTATAATCCGGATGAAAAT 57.419 32.000 19.95 11.86 0.00 1.82
5404 7276 9.938280 TTATAATCCGGATGAAAATGTACTAGG 57.062 33.333 19.95 0.00 0.00 3.02
5799 7972 1.040339 TTGCCGGTTTCAAACTGCCT 61.040 50.000 1.90 0.00 36.43 4.75
5907 8279 6.461110 AGATTACTGGCTGAATCATTTTGG 57.539 37.500 14.17 0.00 35.00 3.28
5916 8288 2.091541 GAATCATTTTGGCCCGTGAGA 58.908 47.619 0.00 0.00 0.00 3.27
5921 8293 2.880963 TTTTGGCCCGTGAGAAAAAG 57.119 45.000 0.00 0.00 0.00 2.27
5951 8323 0.543410 TCTAGCTCCCGACCAACCAA 60.543 55.000 0.00 0.00 0.00 3.67
6009 8391 5.124776 TGACTTACCTGACCAAACAAAACTG 59.875 40.000 0.00 0.00 0.00 3.16
6010 8392 5.014202 ACTTACCTGACCAAACAAAACTGT 58.986 37.500 0.00 0.00 0.00 3.55
6011 8393 3.866883 ACCTGACCAAACAAAACTGTG 57.133 42.857 0.00 0.00 0.00 3.66
6027 8409 3.421844 ACTGTGGGGCTATTTGACTTTC 58.578 45.455 0.00 0.00 0.00 2.62
6039 8421 8.246180 GGCTATTTGACTTTCTTTTCATCATCA 58.754 33.333 0.00 0.00 0.00 3.07
6097 8479 4.900635 ACTTTTCTGTTGGTGATCACAC 57.099 40.909 26.47 17.29 45.27 3.82
6108 8490 7.925993 TGTTGGTGATCACACTTTTAAACTAG 58.074 34.615 26.47 0.00 45.32 2.57
6162 8544 8.771766 CAGGTGAGTTGATACATATGATCTTTG 58.228 37.037 10.38 0.00 0.00 2.77
6185 8567 6.446318 TGGTCAAAGATTTTTATGCTGTGAC 58.554 36.000 0.00 0.00 43.12 3.67
6251 8682 5.698741 ATCCTCACCATATCTCACAAACA 57.301 39.130 0.00 0.00 0.00 2.83
6254 8685 5.013079 TCCTCACCATATCTCACAAACAAGT 59.987 40.000 0.00 0.00 0.00 3.16
6256 8687 5.863965 TCACCATATCTCACAAACAAGTCA 58.136 37.500 0.00 0.00 0.00 3.41
6257 8688 6.475504 TCACCATATCTCACAAACAAGTCAT 58.524 36.000 0.00 0.00 0.00 3.06
6274 8705 2.943033 GTCATTTTCACCCGGATCGAAT 59.057 45.455 0.73 0.00 0.00 3.34
6359 8792 8.462016 ACACAAATCAAAGGAGATACTTATTGC 58.538 33.333 0.00 0.00 0.00 3.56
6432 8865 5.594317 GGTTTCAGATATGTGGTTTATGGCT 59.406 40.000 0.00 0.00 0.00 4.75
6434 8867 7.041098 GGTTTCAGATATGTGGTTTATGGCTAG 60.041 40.741 0.00 0.00 0.00 3.42
6526 8960 5.401550 CAAGCTGTACATTACAACAATGGG 58.598 41.667 0.00 0.00 38.38 4.00
6529 8963 4.082245 GCTGTACATTACAACAATGGGCTT 60.082 41.667 0.00 0.00 38.38 4.35
6553 8987 9.123902 CTTAACTTGGACATGAATCATGGATTA 57.876 33.333 24.99 11.73 45.16 1.75
6558 8992 9.826574 CTTGGACATGAATCATGGATTAAAAAT 57.173 29.630 24.99 2.78 45.16 1.82
6594 9028 5.050490 GCAGAATAAGAGATTCCTTACGCA 58.950 41.667 0.00 0.00 32.11 5.24
6655 9761 5.179368 CGTCAGGCTAATGAAAGAAGAACAA 59.821 40.000 0.00 0.00 0.00 2.83
6718 9826 4.832266 ACCAGTGAATTAACCAAAGCATCA 59.168 37.500 0.00 0.00 0.00 3.07
6721 9829 6.392354 CAGTGAATTAACCAAAGCATCATGT 58.608 36.000 0.00 0.00 0.00 3.21
6747 9855 2.238847 TTTCCAGGTCGAGCCATCCG 62.239 60.000 11.73 0.00 40.61 4.18
6843 9951 8.638685 ATGCAAACATACTTGAATATTTCAGC 57.361 30.769 0.00 0.00 36.39 4.26
6883 9991 8.370493 TCAGTTCTGCATAATTTATAGCTGAC 57.630 34.615 0.00 11.36 35.22 3.51
6911 10019 6.746745 TGACACACGACTAATGTATCACTA 57.253 37.500 0.00 0.00 28.69 2.74
6914 10022 9.063615 TGACACACGACTAATGTATCACTATAT 57.936 33.333 0.00 0.00 28.69 0.86
6915 10023 9.331106 GACACACGACTAATGTATCACTATATG 57.669 37.037 0.00 0.00 0.00 1.78
6916 10024 8.847196 ACACACGACTAATGTATCACTATATGT 58.153 33.333 0.00 0.00 0.00 2.29
6917 10025 9.678941 CACACGACTAATGTATCACTATATGTT 57.321 33.333 0.00 0.00 0.00 2.71
7010 10119 5.046304 ACAGAGTAGCTAATGCAAGGAAAGA 60.046 40.000 0.00 0.00 42.74 2.52
7025 10135 6.735694 GCAAGGAAAGACATAGAAAGTTTGCA 60.736 38.462 0.00 0.00 36.83 4.08
7143 10253 1.533753 TACCCCGACCGACCAAACT 60.534 57.895 0.00 0.00 0.00 2.66
7149 10259 1.508632 CGACCGACCAAACTCATTGT 58.491 50.000 0.00 0.00 37.32 2.71
7198 10308 6.560253 TCTGACTTGCCTCTTTAAACAATC 57.440 37.500 0.00 0.00 0.00 2.67
7205 10315 5.636123 TGCCTCTTTAAACAATCCTACCAA 58.364 37.500 0.00 0.00 0.00 3.67
7215 10325 5.184892 ACAATCCTACCAAGCTCTTTGAT 57.815 39.130 0.00 0.00 39.21 2.57
7262 10372 9.593134 GAACTTGTCTCATAGTGATGATACTTT 57.407 33.333 5.42 0.00 41.33 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 8.589701 TGAAAGTATGTAGTCTGGTTATCTGA 57.410 34.615 0.00 0.00 0.00 3.27
6 7 7.923344 CCTGAAAGTATGTAGTCTGGTTATCTG 59.077 40.741 0.00 0.00 0.00 2.90
7 8 7.620094 ACCTGAAAGTATGTAGTCTGGTTATCT 59.380 37.037 0.00 0.00 38.69 1.98
8 9 7.783042 ACCTGAAAGTATGTAGTCTGGTTATC 58.217 38.462 0.00 0.00 38.69 1.75
9 10 7.735326 ACCTGAAAGTATGTAGTCTGGTTAT 57.265 36.000 0.00 0.00 38.69 1.89
10 11 7.015877 ACAACCTGAAAGTATGTAGTCTGGTTA 59.984 37.037 11.83 0.00 45.24 2.85
12 13 5.307196 ACAACCTGAAAGTATGTAGTCTGGT 59.693 40.000 0.00 0.00 42.22 4.00
13 14 5.794894 ACAACCTGAAAGTATGTAGTCTGG 58.205 41.667 0.00 0.00 35.75 3.86
14 15 6.531948 GCTACAACCTGAAAGTATGTAGTCTG 59.468 42.308 11.53 0.00 33.61 3.51
16 17 6.531948 CAGCTACAACCTGAAAGTATGTAGTC 59.468 42.308 11.53 5.71 33.61 2.59
17 18 6.398918 CAGCTACAACCTGAAAGTATGTAGT 58.601 40.000 11.53 0.00 33.61 2.73
18 19 5.812642 CCAGCTACAACCTGAAAGTATGTAG 59.187 44.000 6.83 6.83 33.61 2.74
21 22 4.393062 CACCAGCTACAACCTGAAAGTATG 59.607 45.833 0.00 0.00 32.03 2.39
22 23 4.041691 ACACCAGCTACAACCTGAAAGTAT 59.958 41.667 0.00 0.00 32.03 2.12
24 25 2.172717 ACACCAGCTACAACCTGAAAGT 59.827 45.455 0.00 0.00 32.03 2.66
25 26 2.808543 GACACCAGCTACAACCTGAAAG 59.191 50.000 0.00 0.00 32.03 2.62
29 30 1.344438 TCAGACACCAGCTACAACCTG 59.656 52.381 0.00 0.00 0.00 4.00
30 31 1.717032 TCAGACACCAGCTACAACCT 58.283 50.000 0.00 0.00 0.00 3.50
31 32 2.417719 CTTCAGACACCAGCTACAACC 58.582 52.381 0.00 0.00 0.00 3.77
32 33 1.801178 GCTTCAGACACCAGCTACAAC 59.199 52.381 0.00 0.00 0.00 3.32
33 34 1.270839 GGCTTCAGACACCAGCTACAA 60.271 52.381 0.00 0.00 33.76 2.41
34 35 0.321671 GGCTTCAGACACCAGCTACA 59.678 55.000 0.00 0.00 33.76 2.74
37 38 0.536006 GTTGGCTTCAGACACCAGCT 60.536 55.000 0.00 0.00 34.28 4.24
39 40 1.845809 GCGTTGGCTTCAGACACCAG 61.846 60.000 0.00 0.00 34.28 4.00
40 41 1.891919 GCGTTGGCTTCAGACACCA 60.892 57.895 0.00 0.00 35.83 4.17
41 42 2.946762 GCGTTGGCTTCAGACACC 59.053 61.111 0.00 0.00 35.83 4.16
52 53 2.048597 TGTACCTCGCAGCGTTGG 60.049 61.111 21.85 21.85 0.00 3.77
58 59 4.692129 CGTAGCTGTACCTCGCAG 57.308 61.111 0.00 0.00 37.06 5.18
71 72 1.920574 CACAGATCTGAAACCGCGTAG 59.079 52.381 29.27 0.00 0.00 3.51
74 75 1.645034 ATCACAGATCTGAAACCGCG 58.355 50.000 29.27 0.00 0.00 6.46
75 76 3.751621 CAAATCACAGATCTGAAACCGC 58.248 45.455 29.27 0.00 0.00 5.68
77 78 3.751621 CGCAAATCACAGATCTGAAACC 58.248 45.455 29.27 9.05 0.00 3.27
78 79 3.166657 GCGCAAATCACAGATCTGAAAC 58.833 45.455 29.27 9.57 0.00 2.78
79 80 2.162208 GGCGCAAATCACAGATCTGAAA 59.838 45.455 29.27 15.96 0.00 2.69
82 83 1.089112 TGGCGCAAATCACAGATCTG 58.911 50.000 21.37 21.37 0.00 2.90
84 85 1.470098 AGTTGGCGCAAATCACAGATC 59.530 47.619 10.83 0.00 0.00 2.75
85 86 1.538047 AGTTGGCGCAAATCACAGAT 58.462 45.000 10.83 0.00 0.00 2.90
87 88 1.001487 TGAAGTTGGCGCAAATCACAG 60.001 47.619 10.83 0.00 0.00 3.66
89 90 1.001378 ACTGAAGTTGGCGCAAATCAC 60.001 47.619 10.83 0.02 0.00 3.06
91 92 1.689959 CACTGAAGTTGGCGCAAATC 58.310 50.000 10.83 0.00 0.00 2.17
92 93 0.318955 GCACTGAAGTTGGCGCAAAT 60.319 50.000 10.83 0.00 0.00 2.32
93 94 1.065600 GCACTGAAGTTGGCGCAAA 59.934 52.632 10.83 0.00 0.00 3.68
94 95 0.533978 TAGCACTGAAGTTGGCGCAA 60.534 50.000 10.83 0.00 0.00 4.85
96 97 0.951040 AGTAGCACTGAAGTTGGCGC 60.951 55.000 0.00 0.00 0.00 6.53
97 98 3.217242 AGTAGCACTGAAGTTGGCG 57.783 52.632 0.00 0.00 0.00 5.69
106 107 6.874134 ACATTTTACTTAGACCAGTAGCACTG 59.126 38.462 8.73 8.73 45.53 3.66
108 109 7.360946 CCAACATTTTACTTAGACCAGTAGCAC 60.361 40.741 0.00 0.00 30.77 4.40
109 110 6.653320 CCAACATTTTACTTAGACCAGTAGCA 59.347 38.462 0.00 0.00 30.77 3.49
111 112 9.367444 CTACCAACATTTTACTTAGACCAGTAG 57.633 37.037 0.00 0.00 30.77 2.57
114 115 9.148104 GTACTACCAACATTTTACTTAGACCAG 57.852 37.037 0.00 0.00 0.00 4.00
115 116 8.873144 AGTACTACCAACATTTTACTTAGACCA 58.127 33.333 0.00 0.00 0.00 4.02
116 117 9.716531 AAGTACTACCAACATTTTACTTAGACC 57.283 33.333 0.00 0.00 29.96 3.85
122 123 8.996271 GCTTACAAGTACTACCAACATTTTACT 58.004 33.333 0.00 0.00 0.00 2.24
127 128 7.040686 CCTTTGCTTACAAGTACTACCAACATT 60.041 37.037 0.00 0.00 37.04 2.71
1042 1287 4.799678 CTGCAATATCCACCTCTAGTACG 58.200 47.826 0.00 0.00 0.00 3.67
2156 2450 5.716228 TCCCTAAAGCATTCAAACACATCAT 59.284 36.000 0.00 0.00 0.00 2.45
4553 5959 5.909621 TTCCTACGCTACAGTAAACTCAT 57.090 39.130 0.00 0.00 0.00 2.90
4607 6013 2.897326 GGTGGACAGCCTGGTTTATTTT 59.103 45.455 0.00 0.00 34.31 1.82
4608 6014 2.158385 TGGTGGACAGCCTGGTTTATTT 60.158 45.455 0.00 0.00 34.31 1.40
4609 6015 1.427368 TGGTGGACAGCCTGGTTTATT 59.573 47.619 0.00 0.00 34.31 1.40
4610 6016 1.072266 TGGTGGACAGCCTGGTTTAT 58.928 50.000 0.00 0.00 34.31 1.40
4611 6017 0.847373 TTGGTGGACAGCCTGGTTTA 59.153 50.000 0.00 0.00 34.31 2.01
4612 6018 0.188342 ATTGGTGGACAGCCTGGTTT 59.812 50.000 0.00 0.00 34.31 3.27
4613 6019 0.188342 AATTGGTGGACAGCCTGGTT 59.812 50.000 0.00 0.00 34.31 3.67
4614 6020 1.072266 TAATTGGTGGACAGCCTGGT 58.928 50.000 0.00 0.00 34.31 4.00
4615 6021 1.818674 GTTAATTGGTGGACAGCCTGG 59.181 52.381 0.00 0.00 34.31 4.45
4616 6022 2.795329 AGTTAATTGGTGGACAGCCTG 58.205 47.619 0.00 0.00 34.31 4.85
4617 6023 3.622455 GCTAGTTAATTGGTGGACAGCCT 60.622 47.826 0.00 0.00 34.31 4.58
4618 6024 2.683362 GCTAGTTAATTGGTGGACAGCC 59.317 50.000 0.00 0.00 0.00 4.85
4619 6025 3.127030 GTGCTAGTTAATTGGTGGACAGC 59.873 47.826 0.00 0.00 0.00 4.40
4620 6026 4.323417 TGTGCTAGTTAATTGGTGGACAG 58.677 43.478 0.00 0.00 0.00 3.51
4621 6027 4.359434 TGTGCTAGTTAATTGGTGGACA 57.641 40.909 0.00 0.00 0.00 4.02
4622 6028 4.760204 ACTTGTGCTAGTTAATTGGTGGAC 59.240 41.667 0.00 0.00 0.00 4.02
4623 6029 4.980573 ACTTGTGCTAGTTAATTGGTGGA 58.019 39.130 0.00 0.00 0.00 4.02
4624 6030 5.703592 TGTACTTGTGCTAGTTAATTGGTGG 59.296 40.000 0.00 0.00 0.00 4.61
4625 6031 6.620733 GCTGTACTTGTGCTAGTTAATTGGTG 60.621 42.308 0.00 0.00 0.00 4.17
4626 6032 5.411669 GCTGTACTTGTGCTAGTTAATTGGT 59.588 40.000 0.00 0.00 0.00 3.67
4653 6059 2.507407 TGTCCAGGTTAAGGCCATTC 57.493 50.000 5.01 0.00 0.00 2.67
4706 6112 4.781934 AGGCCGCATAAGAAACTTTATCT 58.218 39.130 0.00 0.00 0.00 1.98
4779 6191 1.312815 GTATGGTCCCAAGCATGCTC 58.687 55.000 22.93 7.82 43.29 4.26
4814 6235 6.528537 TTGGTTAATCCATTGATCACCTTG 57.471 37.500 0.00 0.00 46.60 3.61
4888 6309 1.202940 ACTTCAGAAACCCCTCTTGCC 60.203 52.381 0.00 0.00 0.00 4.52
4907 6337 3.231160 GTTATGCCGCAAGTAACAACAC 58.769 45.455 10.65 0.00 0.00 3.32
4921 6351 3.813596 CAGTCGCCCTGTTATGCC 58.186 61.111 0.00 0.00 36.37 4.40
4933 6363 4.263209 CAGAAACGATAAGCACTACAGTCG 59.737 45.833 0.00 0.00 35.42 4.18
5004 6445 9.520515 GGGTGTAATTGGTATCATCTTGATATT 57.479 33.333 0.91 0.00 40.97 1.28
5005 6446 8.668653 TGGGTGTAATTGGTATCATCTTGATAT 58.331 33.333 0.91 0.00 40.97 1.63
5006 6447 8.040002 TGGGTGTAATTGGTATCATCTTGATA 57.960 34.615 0.00 0.00 38.26 2.15
5007 6448 6.910191 TGGGTGTAATTGGTATCATCTTGAT 58.090 36.000 0.00 0.00 40.72 2.57
5008 6449 6.320434 TGGGTGTAATTGGTATCATCTTGA 57.680 37.500 0.00 0.00 0.00 3.02
5009 6450 5.009010 GCTGGGTGTAATTGGTATCATCTTG 59.991 44.000 0.00 0.00 0.00 3.02
5010 6451 5.133221 GCTGGGTGTAATTGGTATCATCTT 58.867 41.667 0.00 0.00 0.00 2.40
5011 6452 4.446311 GGCTGGGTGTAATTGGTATCATCT 60.446 45.833 0.00 0.00 0.00 2.90
5012 6453 3.821033 GGCTGGGTGTAATTGGTATCATC 59.179 47.826 0.00 0.00 0.00 2.92
5013 6454 3.463329 AGGCTGGGTGTAATTGGTATCAT 59.537 43.478 0.00 0.00 0.00 2.45
5014 6455 2.849943 AGGCTGGGTGTAATTGGTATCA 59.150 45.455 0.00 0.00 0.00 2.15
5015 6456 3.136626 AGAGGCTGGGTGTAATTGGTATC 59.863 47.826 0.00 0.00 0.00 2.24
5016 6457 3.117888 CAGAGGCTGGGTGTAATTGGTAT 60.118 47.826 0.00 0.00 0.00 2.73
5017 6458 2.238646 CAGAGGCTGGGTGTAATTGGTA 59.761 50.000 0.00 0.00 0.00 3.25
5018 6459 1.004745 CAGAGGCTGGGTGTAATTGGT 59.995 52.381 0.00 0.00 0.00 3.67
5019 6460 1.755179 CAGAGGCTGGGTGTAATTGG 58.245 55.000 0.00 0.00 0.00 3.16
5020 6461 1.098050 GCAGAGGCTGGGTGTAATTG 58.902 55.000 0.00 0.00 36.96 2.32
5021 6462 0.698238 TGCAGAGGCTGGGTGTAATT 59.302 50.000 0.00 0.00 41.91 1.40
5022 6463 0.698238 TTGCAGAGGCTGGGTGTAAT 59.302 50.000 0.00 0.00 41.91 1.89
5023 6464 0.250727 GTTGCAGAGGCTGGGTGTAA 60.251 55.000 0.00 0.00 41.91 2.41
5024 6465 1.374947 GTTGCAGAGGCTGGGTGTA 59.625 57.895 0.00 0.00 41.91 2.90
5025 6466 2.113986 GTTGCAGAGGCTGGGTGT 59.886 61.111 0.00 0.00 41.91 4.16
5026 6467 1.529010 TTGTTGCAGAGGCTGGGTG 60.529 57.895 0.00 0.00 41.91 4.61
5027 6468 1.529244 GTTGTTGCAGAGGCTGGGT 60.529 57.895 0.00 0.00 41.91 4.51
5028 6469 0.896940 ATGTTGTTGCAGAGGCTGGG 60.897 55.000 0.00 0.00 41.91 4.45
5029 6470 1.825090 TATGTTGTTGCAGAGGCTGG 58.175 50.000 0.00 0.00 41.91 4.85
5030 6471 5.278169 GGATATTATGTTGTTGCAGAGGCTG 60.278 44.000 0.00 0.00 41.91 4.85
5031 6472 4.823989 GGATATTATGTTGTTGCAGAGGCT 59.176 41.667 0.00 0.00 41.91 4.58
5032 6473 4.580167 TGGATATTATGTTGTTGCAGAGGC 59.420 41.667 0.00 0.00 41.68 4.70
5033 6474 6.057533 TCTGGATATTATGTTGTTGCAGAGG 58.942 40.000 0.00 0.00 32.13 3.69
5034 6475 7.443272 TGATCTGGATATTATGTTGTTGCAGAG 59.557 37.037 0.00 0.00 38.02 3.35
5035 6476 7.281841 TGATCTGGATATTATGTTGTTGCAGA 58.718 34.615 0.00 0.00 38.78 4.26
5036 6477 7.500720 TGATCTGGATATTATGTTGTTGCAG 57.499 36.000 0.00 0.00 0.00 4.41
5037 6478 7.557358 ACTTGATCTGGATATTATGTTGTTGCA 59.443 33.333 0.00 0.00 0.00 4.08
5038 6479 7.934457 ACTTGATCTGGATATTATGTTGTTGC 58.066 34.615 0.00 0.00 0.00 4.17
5039 6480 9.334947 AGACTTGATCTGGATATTATGTTGTTG 57.665 33.333 0.00 0.00 35.81 3.33
5044 6485 9.593565 TGTCTAGACTTGATCTGGATATTATGT 57.406 33.333 23.01 0.00 45.74 2.29
5047 6488 9.813826 TGATGTCTAGACTTGATCTGGATATTA 57.186 33.333 23.01 0.00 45.74 0.98
5048 6489 8.718158 TGATGTCTAGACTTGATCTGGATATT 57.282 34.615 23.01 0.00 45.74 1.28
5049 6490 8.751242 CATGATGTCTAGACTTGATCTGGATAT 58.249 37.037 23.01 4.19 45.74 1.63
5050 6491 7.178097 CCATGATGTCTAGACTTGATCTGGATA 59.822 40.741 23.01 3.39 45.74 2.59
5051 6492 6.014413 CCATGATGTCTAGACTTGATCTGGAT 60.014 42.308 23.01 5.42 45.74 3.41
5052 6493 5.303845 CCATGATGTCTAGACTTGATCTGGA 59.696 44.000 23.01 4.03 42.31 3.86
5053 6494 5.303845 TCCATGATGTCTAGACTTGATCTGG 59.696 44.000 23.01 21.18 38.49 3.86
5054 6495 6.402456 TCCATGATGTCTAGACTTGATCTG 57.598 41.667 23.01 15.26 38.49 2.90
5055 6496 6.518706 GCATCCATGATGTCTAGACTTGATCT 60.519 42.308 23.01 6.24 41.60 2.75
5056 6497 5.638657 GCATCCATGATGTCTAGACTTGATC 59.361 44.000 23.01 17.20 41.60 2.92
5057 6498 5.071384 TGCATCCATGATGTCTAGACTTGAT 59.929 40.000 23.01 13.85 41.60 2.57
5058 6499 4.406649 TGCATCCATGATGTCTAGACTTGA 59.593 41.667 23.01 12.10 41.60 3.02
5059 6500 4.510711 GTGCATCCATGATGTCTAGACTTG 59.489 45.833 23.01 14.36 41.60 3.16
5060 6501 4.162888 TGTGCATCCATGATGTCTAGACTT 59.837 41.667 23.01 17.10 41.60 3.01
5061 6502 3.708121 TGTGCATCCATGATGTCTAGACT 59.292 43.478 23.01 9.26 41.60 3.24
5062 6503 3.806521 GTGTGCATCCATGATGTCTAGAC 59.193 47.826 16.32 16.32 41.60 2.59
5063 6504 3.451902 TGTGTGCATCCATGATGTCTAGA 59.548 43.478 0.00 0.00 41.60 2.43
5064 6505 3.800531 TGTGTGCATCCATGATGTCTAG 58.199 45.455 0.00 0.00 41.60 2.43
5065 6506 3.800531 CTGTGTGCATCCATGATGTCTA 58.199 45.455 0.00 0.00 41.60 2.59
5066 6507 2.640184 CTGTGTGCATCCATGATGTCT 58.360 47.619 0.00 0.00 41.60 3.41
5067 6508 1.065102 GCTGTGTGCATCCATGATGTC 59.935 52.381 0.00 0.13 41.60 3.06
5068 6509 1.100510 GCTGTGTGCATCCATGATGT 58.899 50.000 0.00 0.00 41.60 3.06
5069 6510 0.384309 GGCTGTGTGCATCCATGATG 59.616 55.000 0.00 0.00 45.15 3.07
5070 6511 0.033894 TGGCTGTGTGCATCCATGAT 60.034 50.000 0.00 0.00 45.15 2.45
5071 6512 0.251253 TTGGCTGTGTGCATCCATGA 60.251 50.000 0.00 0.00 40.19 3.07
5072 6513 0.604073 TTTGGCTGTGTGCATCCATG 59.396 50.000 0.00 0.00 40.19 3.66
5073 6514 1.340088 TTTTGGCTGTGTGCATCCAT 58.660 45.000 0.00 0.00 40.19 3.41
5074 6515 1.117994 TTTTTGGCTGTGTGCATCCA 58.882 45.000 0.00 0.00 45.15 3.41
5075 6516 3.984838 TTTTTGGCTGTGTGCATCC 57.015 47.368 0.00 0.00 45.15 3.51
5108 6549 6.764379 TCAACTGGGACTTTGTTTTCTTTTT 58.236 32.000 0.00 0.00 0.00 1.94
5109 6550 6.353404 TCAACTGGGACTTTGTTTTCTTTT 57.647 33.333 0.00 0.00 0.00 2.27
5110 6551 5.993748 TCAACTGGGACTTTGTTTTCTTT 57.006 34.783 0.00 0.00 0.00 2.52
5111 6552 5.993748 TTCAACTGGGACTTTGTTTTCTT 57.006 34.783 0.00 0.00 0.00 2.52
5112 6553 5.245075 TGTTTCAACTGGGACTTTGTTTTCT 59.755 36.000 0.00 0.00 0.00 2.52
5113 6554 5.474825 TGTTTCAACTGGGACTTTGTTTTC 58.525 37.500 0.00 0.00 0.00 2.29
5114 6555 5.476091 TGTTTCAACTGGGACTTTGTTTT 57.524 34.783 0.00 0.00 0.00 2.43
5115 6556 5.476091 TTGTTTCAACTGGGACTTTGTTT 57.524 34.783 0.00 0.00 0.00 2.83
5116 6557 5.245075 TCTTTGTTTCAACTGGGACTTTGTT 59.755 36.000 0.00 0.00 0.00 2.83
5117 6558 4.770010 TCTTTGTTTCAACTGGGACTTTGT 59.230 37.500 0.00 0.00 0.00 2.83
5118 6559 5.125417 TCTCTTTGTTTCAACTGGGACTTTG 59.875 40.000 0.00 0.00 0.00 2.77
5119 6560 5.261216 TCTCTTTGTTTCAACTGGGACTTT 58.739 37.500 0.00 0.00 0.00 2.66
5120 6561 4.855340 TCTCTTTGTTTCAACTGGGACTT 58.145 39.130 0.00 0.00 0.00 3.01
5121 6562 4.455606 CTCTCTTTGTTTCAACTGGGACT 58.544 43.478 0.00 0.00 0.00 3.85
5122 6563 3.565902 CCTCTCTTTGTTTCAACTGGGAC 59.434 47.826 0.00 0.00 0.00 4.46
5123 6564 3.820557 CCTCTCTTTGTTTCAACTGGGA 58.179 45.455 0.00 0.00 0.00 4.37
5124 6565 2.294512 GCCTCTCTTTGTTTCAACTGGG 59.705 50.000 0.00 0.00 0.00 4.45
5125 6566 3.217626 AGCCTCTCTTTGTTTCAACTGG 58.782 45.455 0.00 0.00 0.00 4.00
5126 6567 4.604976 CAAGCCTCTCTTTGTTTCAACTG 58.395 43.478 0.00 0.00 31.27 3.16
5127 6568 3.067320 GCAAGCCTCTCTTTGTTTCAACT 59.933 43.478 0.00 0.00 31.27 3.16
5128 6569 3.181487 TGCAAGCCTCTCTTTGTTTCAAC 60.181 43.478 0.00 0.00 31.27 3.18
5129 6570 3.023119 TGCAAGCCTCTCTTTGTTTCAA 58.977 40.909 0.00 0.00 31.27 2.69
5130 6571 2.620115 CTGCAAGCCTCTCTTTGTTTCA 59.380 45.455 0.00 0.00 31.27 2.69
5131 6572 3.279853 CTGCAAGCCTCTCTTTGTTTC 57.720 47.619 0.00 0.00 31.27 2.78
5148 6589 1.371389 GTTGTGCTCTTGCTGCTGC 60.371 57.895 8.89 8.89 40.48 5.25
5149 6590 1.285023 GGTTGTGCTCTTGCTGCTG 59.715 57.895 0.00 0.00 40.48 4.41
5150 6591 1.152902 TGGTTGTGCTCTTGCTGCT 60.153 52.632 0.00 0.00 40.48 4.24
5151 6592 1.285023 CTGGTTGTGCTCTTGCTGC 59.715 57.895 0.00 0.00 40.48 5.25
5152 6593 0.309922 CACTGGTTGTGCTCTTGCTG 59.690 55.000 0.00 0.00 40.06 4.41
5153 6594 0.181114 TCACTGGTTGTGCTCTTGCT 59.819 50.000 0.00 0.00 45.81 3.91
5154 6595 1.068748 CATCACTGGTTGTGCTCTTGC 60.069 52.381 0.00 0.00 45.81 4.01
5155 6596 1.538512 CCATCACTGGTTGTGCTCTTG 59.461 52.381 0.00 0.00 45.81 3.02
5156 6597 1.901591 CCATCACTGGTTGTGCTCTT 58.098 50.000 0.00 0.00 45.81 2.85
5157 6598 0.607489 GCCATCACTGGTTGTGCTCT 60.607 55.000 0.00 0.00 45.81 4.09
5158 6599 0.890542 TGCCATCACTGGTTGTGCTC 60.891 55.000 0.00 0.00 45.81 4.26
5159 6600 0.467844 TTGCCATCACTGGTTGTGCT 60.468 50.000 0.00 0.00 45.81 4.40
5160 6601 0.318955 GTTGCCATCACTGGTTGTGC 60.319 55.000 0.00 0.00 45.81 4.57
5161 6602 1.031235 TGTTGCCATCACTGGTTGTG 58.969 50.000 0.00 0.00 45.10 3.33
5162 6603 1.032014 GTGTTGCCATCACTGGTTGT 58.968 50.000 0.00 0.00 45.10 3.32
5163 6604 0.314935 GGTGTTGCCATCACTGGTTG 59.685 55.000 5.92 0.00 45.10 3.77
5164 6605 0.185901 AGGTGTTGCCATCACTGGTT 59.814 50.000 5.92 0.00 45.10 3.67
5165 6606 1.003580 CTAGGTGTTGCCATCACTGGT 59.996 52.381 5.92 0.00 45.10 4.00
5166 6607 1.278985 TCTAGGTGTTGCCATCACTGG 59.721 52.381 5.92 0.00 46.17 4.00
5167 6608 2.027745 AGTCTAGGTGTTGCCATCACTG 60.028 50.000 5.92 0.00 40.61 3.66
5168 6609 2.234908 GAGTCTAGGTGTTGCCATCACT 59.765 50.000 5.92 0.00 40.61 3.41
5169 6610 2.622436 GAGTCTAGGTGTTGCCATCAC 58.378 52.381 0.00 0.00 40.61 3.06
5170 6611 1.555075 GGAGTCTAGGTGTTGCCATCA 59.445 52.381 0.00 0.00 40.61 3.07
5171 6612 1.471676 CGGAGTCTAGGTGTTGCCATC 60.472 57.143 0.00 0.00 40.61 3.51
5172 6613 0.537188 CGGAGTCTAGGTGTTGCCAT 59.463 55.000 0.00 0.00 40.61 4.40
5173 6614 0.541063 TCGGAGTCTAGGTGTTGCCA 60.541 55.000 0.00 0.00 40.61 4.92
5174 6615 0.606604 TTCGGAGTCTAGGTGTTGCC 59.393 55.000 0.00 0.00 37.58 4.52
5175 6616 2.450609 TTTCGGAGTCTAGGTGTTGC 57.549 50.000 0.00 0.00 0.00 4.17
5176 6617 4.628074 TCTTTTTCGGAGTCTAGGTGTTG 58.372 43.478 0.00 0.00 0.00 3.33
5177 6618 4.950205 TCTTTTTCGGAGTCTAGGTGTT 57.050 40.909 0.00 0.00 0.00 3.32
5178 6619 5.246429 AGAATCTTTTTCGGAGTCTAGGTGT 59.754 40.000 0.00 0.00 36.56 4.16
5179 6620 5.725362 AGAATCTTTTTCGGAGTCTAGGTG 58.275 41.667 0.00 0.00 36.56 4.00
5180 6621 5.105269 GGAGAATCTTTTTCGGAGTCTAGGT 60.105 44.000 0.00 0.00 38.09 3.08
5181 6622 5.105310 TGGAGAATCTTTTTCGGAGTCTAGG 60.105 44.000 0.00 0.00 38.09 3.02
5182 6623 5.967088 TGGAGAATCTTTTTCGGAGTCTAG 58.033 41.667 0.00 0.00 38.09 2.43
5183 6624 5.995565 TGGAGAATCTTTTTCGGAGTCTA 57.004 39.130 0.00 0.00 38.09 2.59
5184 6625 4.891992 TGGAGAATCTTTTTCGGAGTCT 57.108 40.909 0.00 0.00 40.18 3.24
5185 6626 5.941948 TTTGGAGAATCTTTTTCGGAGTC 57.058 39.130 0.00 0.00 33.73 3.36
5186 6627 6.504398 GTTTTTGGAGAATCTTTTTCGGAGT 58.496 36.000 0.00 0.00 33.73 3.85
5187 6628 5.625311 CGTTTTTGGAGAATCTTTTTCGGAG 59.375 40.000 0.00 0.00 33.73 4.63
5188 6629 5.297278 TCGTTTTTGGAGAATCTTTTTCGGA 59.703 36.000 0.00 0.00 33.73 4.55
5189 6630 5.516090 TCGTTTTTGGAGAATCTTTTTCGG 58.484 37.500 0.00 0.00 33.73 4.30
5190 6631 6.343924 CGTTCGTTTTTGGAGAATCTTTTTCG 60.344 38.462 0.00 0.00 33.73 3.46
5191 6632 6.559703 GCGTTCGTTTTTGGAGAATCTTTTTC 60.560 38.462 0.00 0.00 33.73 2.29
5192 6633 5.231357 GCGTTCGTTTTTGGAGAATCTTTTT 59.769 36.000 0.00 0.00 33.73 1.94
5193 6634 4.738252 GCGTTCGTTTTTGGAGAATCTTTT 59.262 37.500 0.00 0.00 33.73 2.27
5194 6635 4.287720 GCGTTCGTTTTTGGAGAATCTTT 58.712 39.130 0.00 0.00 33.73 2.52
5195 6636 3.304458 GGCGTTCGTTTTTGGAGAATCTT 60.304 43.478 0.00 0.00 33.73 2.40
5196 6637 2.225727 GGCGTTCGTTTTTGGAGAATCT 59.774 45.455 0.00 0.00 33.73 2.40
5197 6638 2.225727 AGGCGTTCGTTTTTGGAGAATC 59.774 45.455 0.00 0.00 0.00 2.52
5198 6639 2.227194 AGGCGTTCGTTTTTGGAGAAT 58.773 42.857 0.00 0.00 0.00 2.40
5199 6640 1.670791 AGGCGTTCGTTTTTGGAGAA 58.329 45.000 0.00 0.00 0.00 2.87
5200 6641 1.600485 GAAGGCGTTCGTTTTTGGAGA 59.400 47.619 2.98 0.00 0.00 3.71
5201 6642 1.332375 TGAAGGCGTTCGTTTTTGGAG 59.668 47.619 13.98 0.00 35.17 3.86
5202 6643 1.380524 TGAAGGCGTTCGTTTTTGGA 58.619 45.000 13.98 0.00 35.17 3.53
5203 6644 2.116366 CTTGAAGGCGTTCGTTTTTGG 58.884 47.619 13.98 0.00 35.17 3.28
5204 6645 3.059634 TCTTGAAGGCGTTCGTTTTTG 57.940 42.857 13.98 1.71 35.17 2.44
5205 6646 3.488553 CCTTCTTGAAGGCGTTCGTTTTT 60.489 43.478 15.43 0.00 35.17 1.94
5206 6647 2.032924 CCTTCTTGAAGGCGTTCGTTTT 59.967 45.455 15.43 0.00 35.17 2.43
5207 6648 1.602377 CCTTCTTGAAGGCGTTCGTTT 59.398 47.619 15.43 0.00 35.17 3.60
5208 6649 1.226746 CCTTCTTGAAGGCGTTCGTT 58.773 50.000 15.43 0.00 35.17 3.85
5209 6650 0.106149 ACCTTCTTGAAGGCGTTCGT 59.894 50.000 24.58 5.86 43.80 3.85
5210 6651 1.226746 AACCTTCTTGAAGGCGTTCG 58.773 50.000 24.58 5.23 43.80 3.95
5211 6652 5.063564 CACTATAACCTTCTTGAAGGCGTTC 59.936 44.000 24.58 12.18 43.80 3.95
5212 6653 4.935808 CACTATAACCTTCTTGAAGGCGTT 59.064 41.667 24.58 16.42 43.80 4.84
5213 6654 4.504858 CACTATAACCTTCTTGAAGGCGT 58.495 43.478 24.58 16.84 43.80 5.68
5214 6655 3.309954 GCACTATAACCTTCTTGAAGGCG 59.690 47.826 24.58 12.89 43.80 5.52
5215 6656 4.095036 GTGCACTATAACCTTCTTGAAGGC 59.905 45.833 24.58 11.57 43.80 4.35
5216 6657 5.245531 TGTGCACTATAACCTTCTTGAAGG 58.754 41.667 23.44 23.44 45.46 3.46
5217 6658 6.801539 TTGTGCACTATAACCTTCTTGAAG 57.198 37.500 19.41 3.55 0.00 3.02
5218 6659 6.544197 TGTTTGTGCACTATAACCTTCTTGAA 59.456 34.615 19.41 0.00 0.00 2.69
5219 6660 6.017440 GTGTTTGTGCACTATAACCTTCTTGA 60.017 38.462 19.41 0.17 36.51 3.02
5220 6661 6.142817 GTGTTTGTGCACTATAACCTTCTTG 58.857 40.000 19.41 0.00 36.51 3.02
5221 6662 5.240844 GGTGTTTGTGCACTATAACCTTCTT 59.759 40.000 19.41 0.00 39.21 2.52
5222 6663 4.760204 GGTGTTTGTGCACTATAACCTTCT 59.240 41.667 19.41 0.00 39.21 2.85
5223 6664 4.517453 TGGTGTTTGTGCACTATAACCTTC 59.483 41.667 23.48 15.05 39.21 3.46
5224 6665 4.465886 TGGTGTTTGTGCACTATAACCTT 58.534 39.130 23.48 0.00 39.21 3.50
5225 6666 4.093472 TGGTGTTTGTGCACTATAACCT 57.907 40.909 23.48 0.00 39.21 3.50
5226 6667 4.436852 CGATGGTGTTTGTGCACTATAACC 60.437 45.833 19.41 19.34 39.99 2.85
5227 6668 4.153475 ACGATGGTGTTTGTGCACTATAAC 59.847 41.667 19.41 18.19 39.99 1.89
5228 6669 4.320023 ACGATGGTGTTTGTGCACTATAA 58.680 39.130 19.41 6.95 39.99 0.98
5229 6670 3.930229 GACGATGGTGTTTGTGCACTATA 59.070 43.478 19.41 1.51 39.99 1.31
5230 6671 2.742053 GACGATGGTGTTTGTGCACTAT 59.258 45.455 19.41 0.00 42.05 2.12
5231 6672 2.139917 GACGATGGTGTTTGTGCACTA 58.860 47.619 19.41 7.83 39.21 2.74
5232 6673 0.944386 GACGATGGTGTTTGTGCACT 59.056 50.000 19.41 0.00 39.21 4.40
5233 6674 0.384230 CGACGATGGTGTTTGTGCAC 60.384 55.000 10.75 10.75 38.56 4.57
5234 6675 0.812014 ACGACGATGGTGTTTGTGCA 60.812 50.000 0.00 0.00 0.00 4.57
5235 6676 0.110823 GACGACGATGGTGTTTGTGC 60.111 55.000 0.00 0.00 0.00 4.57
5236 6677 0.511221 GGACGACGATGGTGTTTGTG 59.489 55.000 0.00 0.00 0.00 3.33
5237 6678 2.908817 GGACGACGATGGTGTTTGT 58.091 52.632 0.00 0.00 0.00 2.83
5248 6689 3.291101 ATGGTTGGACCGGACGACG 62.291 63.158 9.46 0.00 42.58 5.12
5249 6690 1.447314 GATGGTTGGACCGGACGAC 60.447 63.158 9.46 10.72 42.58 4.34
5250 6691 1.261938 ATGATGGTTGGACCGGACGA 61.262 55.000 9.46 0.00 42.58 4.20
5251 6692 0.462375 TATGATGGTTGGACCGGACG 59.538 55.000 9.46 0.00 42.58 4.79
5252 6693 1.485066 ACTATGATGGTTGGACCGGAC 59.515 52.381 9.46 0.00 42.58 4.79
5253 6694 1.760613 GACTATGATGGTTGGACCGGA 59.239 52.381 9.46 0.00 42.58 5.14
5254 6695 1.484653 TGACTATGATGGTTGGACCGG 59.515 52.381 0.00 0.00 42.58 5.28
5255 6696 2.430694 TCTGACTATGATGGTTGGACCG 59.569 50.000 0.00 0.00 42.58 4.79
5256 6697 4.503991 GGATCTGACTATGATGGTTGGACC 60.504 50.000 0.00 0.00 39.22 4.46
5257 6698 4.346418 AGGATCTGACTATGATGGTTGGAC 59.654 45.833 0.00 0.00 0.00 4.02
5258 6699 4.346127 CAGGATCTGACTATGATGGTTGGA 59.654 45.833 0.00 0.00 32.44 3.53
5259 6700 4.504514 CCAGGATCTGACTATGATGGTTGG 60.505 50.000 0.00 0.00 32.44 3.77
5260 6701 4.504514 CCCAGGATCTGACTATGATGGTTG 60.505 50.000 0.00 0.00 32.44 3.77
5261 6702 3.649981 CCCAGGATCTGACTATGATGGTT 59.350 47.826 0.00 0.00 32.44 3.67
5262 6703 3.246301 CCCAGGATCTGACTATGATGGT 58.754 50.000 0.00 0.00 32.44 3.55
5263 6704 3.246301 ACCCAGGATCTGACTATGATGG 58.754 50.000 0.00 0.00 32.44 3.51
5264 6705 4.970860 AACCCAGGATCTGACTATGATG 57.029 45.455 0.00 0.00 32.44 3.07
5265 6706 5.429762 TGAAAACCCAGGATCTGACTATGAT 59.570 40.000 0.00 0.00 32.44 2.45
5266 6707 4.782691 TGAAAACCCAGGATCTGACTATGA 59.217 41.667 0.00 0.00 32.44 2.15
5267 6708 4.878397 GTGAAAACCCAGGATCTGACTATG 59.122 45.833 0.00 0.00 32.44 2.23
5268 6709 4.080299 GGTGAAAACCCAGGATCTGACTAT 60.080 45.833 0.00 0.00 32.44 2.12
5269 6710 3.263425 GGTGAAAACCCAGGATCTGACTA 59.737 47.826 0.00 0.00 32.44 2.59
5270 6711 2.040412 GGTGAAAACCCAGGATCTGACT 59.960 50.000 0.00 0.00 32.44 3.41
5271 6712 2.437413 GGTGAAAACCCAGGATCTGAC 58.563 52.381 0.00 0.00 32.44 3.51
5272 6713 2.879103 GGTGAAAACCCAGGATCTGA 57.121 50.000 0.00 0.00 32.44 3.27
5282 6723 1.911057 CCTTCTCCAGGGTGAAAACC 58.089 55.000 4.57 0.00 39.39 3.27
5295 6736 4.021102 TGTTTGGAGATTGGACCTTCTC 57.979 45.455 13.65 13.65 38.10 2.87
5296 6737 4.453480 TTGTTTGGAGATTGGACCTTCT 57.547 40.909 0.00 0.00 0.00 2.85
5297 6738 4.619160 GCATTGTTTGGAGATTGGACCTTC 60.619 45.833 0.00 0.00 0.00 3.46
5298 6739 3.259123 GCATTGTTTGGAGATTGGACCTT 59.741 43.478 0.00 0.00 0.00 3.50
5299 6740 2.827921 GCATTGTTTGGAGATTGGACCT 59.172 45.455 0.00 0.00 0.00 3.85
5300 6741 2.094026 GGCATTGTTTGGAGATTGGACC 60.094 50.000 0.00 0.00 0.00 4.46
5301 6742 2.094026 GGGCATTGTTTGGAGATTGGAC 60.094 50.000 0.00 0.00 0.00 4.02
5302 6743 2.178580 GGGCATTGTTTGGAGATTGGA 58.821 47.619 0.00 0.00 0.00 3.53
5303 6744 2.181975 AGGGCATTGTTTGGAGATTGG 58.818 47.619 0.00 0.00 0.00 3.16
5304 6745 3.258872 TGAAGGGCATTGTTTGGAGATTG 59.741 43.478 0.00 0.00 0.00 2.67
5305 6746 3.509442 TGAAGGGCATTGTTTGGAGATT 58.491 40.909 0.00 0.00 0.00 2.40
5306 6747 3.173953 TGAAGGGCATTGTTTGGAGAT 57.826 42.857 0.00 0.00 0.00 2.75
5307 6748 2.673775 TGAAGGGCATTGTTTGGAGA 57.326 45.000 0.00 0.00 0.00 3.71
5308 6749 3.967332 ATTGAAGGGCATTGTTTGGAG 57.033 42.857 0.00 0.00 0.00 3.86
5309 6750 3.903090 AGAATTGAAGGGCATTGTTTGGA 59.097 39.130 0.00 0.00 0.00 3.53
5310 6751 4.276058 AGAATTGAAGGGCATTGTTTGG 57.724 40.909 0.00 0.00 0.00 3.28
5311 6752 5.299148 TGAAGAATTGAAGGGCATTGTTTG 58.701 37.500 0.00 0.00 0.00 2.93
5312 6753 5.549742 TGAAGAATTGAAGGGCATTGTTT 57.450 34.783 0.00 0.00 0.00 2.83
5313 6754 5.750352 ATGAAGAATTGAAGGGCATTGTT 57.250 34.783 0.00 0.00 0.00 2.83
5314 6755 5.361857 CCTATGAAGAATTGAAGGGCATTGT 59.638 40.000 0.00 0.00 0.00 2.71
5315 6756 5.361857 ACCTATGAAGAATTGAAGGGCATTG 59.638 40.000 0.00 0.00 0.00 2.82
5316 6757 5.522641 ACCTATGAAGAATTGAAGGGCATT 58.477 37.500 0.00 0.00 0.00 3.56
5317 6758 5.134725 ACCTATGAAGAATTGAAGGGCAT 57.865 39.130 0.00 0.00 0.00 4.40
5318 6759 4.591321 ACCTATGAAGAATTGAAGGGCA 57.409 40.909 0.00 0.00 0.00 5.36
5319 6760 4.440663 GCAACCTATGAAGAATTGAAGGGC 60.441 45.833 0.00 0.00 0.00 5.19
5320 6761 4.706476 TGCAACCTATGAAGAATTGAAGGG 59.294 41.667 0.00 0.00 0.00 3.95
5321 6762 5.678107 GCTGCAACCTATGAAGAATTGAAGG 60.678 44.000 0.00 0.00 36.73 3.46
5322 6763 5.125097 AGCTGCAACCTATGAAGAATTGAAG 59.875 40.000 1.02 0.00 36.73 3.02
5323 6764 5.012239 AGCTGCAACCTATGAAGAATTGAA 58.988 37.500 1.02 0.00 36.73 2.69
5324 6765 4.397103 CAGCTGCAACCTATGAAGAATTGA 59.603 41.667 0.00 0.00 36.73 2.57
5325 6766 4.397103 TCAGCTGCAACCTATGAAGAATTG 59.603 41.667 9.47 0.00 36.73 2.32
5326 6767 4.592942 TCAGCTGCAACCTATGAAGAATT 58.407 39.130 9.47 0.00 36.73 2.17
5327 6768 4.226427 TCAGCTGCAACCTATGAAGAAT 57.774 40.909 9.47 0.00 36.73 2.40
5328 6769 3.701205 TCAGCTGCAACCTATGAAGAA 57.299 42.857 9.47 0.00 36.73 2.52
5329 6770 3.701205 TTCAGCTGCAACCTATGAAGA 57.299 42.857 9.47 0.00 36.73 2.87
5330 6771 4.639310 AGAATTCAGCTGCAACCTATGAAG 59.361 41.667 9.47 0.00 37.81 3.02
5331 6772 4.592942 AGAATTCAGCTGCAACCTATGAA 58.407 39.130 9.47 2.11 34.64 2.57
5332 6773 4.226427 AGAATTCAGCTGCAACCTATGA 57.774 40.909 9.47 0.00 0.00 2.15
5333 6774 4.157289 ACAAGAATTCAGCTGCAACCTATG 59.843 41.667 9.47 5.29 0.00 2.23
5334 6775 4.338879 ACAAGAATTCAGCTGCAACCTAT 58.661 39.130 9.47 0.00 0.00 2.57
5335 6776 3.753272 GACAAGAATTCAGCTGCAACCTA 59.247 43.478 9.47 0.00 0.00 3.08
5336 6777 2.555757 GACAAGAATTCAGCTGCAACCT 59.444 45.455 9.47 0.58 0.00 3.50
5337 6778 2.294233 TGACAAGAATTCAGCTGCAACC 59.706 45.455 9.47 0.00 0.00 3.77
5338 6779 3.243168 TGTGACAAGAATTCAGCTGCAAC 60.243 43.478 9.47 0.30 0.00 4.17
5339 6780 2.950975 TGTGACAAGAATTCAGCTGCAA 59.049 40.909 9.47 4.90 0.00 4.08
5340 6781 2.291465 GTGTGACAAGAATTCAGCTGCA 59.709 45.455 9.47 0.00 0.00 4.41
5486 7365 6.392354 TGTTGTAGAATTCGAGACGGTTAAT 58.608 36.000 0.00 0.00 0.00 1.40
5488 7367 5.375417 TGTTGTAGAATTCGAGACGGTTA 57.625 39.130 0.00 0.00 0.00 2.85
5493 7372 8.175069 TGCAATAAATGTTGTAGAATTCGAGAC 58.825 33.333 0.00 0.77 0.00 3.36
5499 7659 9.846248 GAGACTTGCAATAAATGTTGTAGAATT 57.154 29.630 0.00 0.00 0.00 2.17
5799 7972 5.095145 TCGACCACTAGCTCTAAAGTCTA 57.905 43.478 0.00 0.00 0.00 2.59
5835 8018 4.063998 TGACTACTGCTAAGCATGATGG 57.936 45.455 0.00 0.00 38.13 3.51
5907 8279 1.001706 GTTGACCTTTTTCTCACGGGC 60.002 52.381 0.00 0.00 0.00 6.13
5916 8288 3.149981 GCTAGAGCTGGTTGACCTTTTT 58.850 45.455 0.00 0.00 38.21 1.94
5972 8354 4.154918 CAGGTAAGTCAGAAGGCATTGTTC 59.845 45.833 0.00 0.00 0.00 3.18
6009 8391 5.010617 TGAAAAGAAAGTCAAATAGCCCCAC 59.989 40.000 0.00 0.00 0.00 4.61
6010 8392 5.144100 TGAAAAGAAAGTCAAATAGCCCCA 58.856 37.500 0.00 0.00 0.00 4.96
6011 8393 5.722021 TGAAAAGAAAGTCAAATAGCCCC 57.278 39.130 0.00 0.00 0.00 5.80
6059 8441 5.994668 AGAAAAGTTCAGTTCAGTCATCTCC 59.005 40.000 0.00 0.00 0.00 3.71
6064 8446 5.123820 CCAACAGAAAAGTTCAGTTCAGTCA 59.876 40.000 0.00 0.00 37.30 3.41
6097 8479 9.515020 TGCAATCAAAGTCAACTAGTTTAAAAG 57.485 29.630 5.07 0.00 0.00 2.27
6108 8490 4.022935 TCAGTCCATGCAATCAAAGTCAAC 60.023 41.667 0.00 0.00 0.00 3.18
6162 8544 6.446318 TGTCACAGCATAAAAATCTTTGACC 58.554 36.000 0.00 0.00 36.96 4.02
6176 8558 6.151480 TGTTCATTGATAACATGTCACAGCAT 59.849 34.615 0.00 0.00 32.07 3.79
6251 8682 2.027561 TCGATCCGGGTGAAAATGACTT 60.028 45.455 0.00 0.00 0.00 3.01
6254 8685 2.772077 TTCGATCCGGGTGAAAATGA 57.228 45.000 0.00 0.00 0.00 2.57
6256 8687 5.488341 CCTATATTCGATCCGGGTGAAAAT 58.512 41.667 0.00 0.00 0.00 1.82
6257 8688 4.801581 GCCTATATTCGATCCGGGTGAAAA 60.802 45.833 0.00 0.00 0.00 2.29
6274 8705 6.049149 CGAAGATGGAAAAGAAGTGCCTATA 58.951 40.000 0.00 0.00 0.00 1.31
6359 8792 3.930336 TCAGACACCAGCTTCAAGTATG 58.070 45.455 0.00 0.00 0.00 2.39
6363 8796 1.534595 GCTTCAGACACCAGCTTCAAG 59.465 52.381 0.00 0.00 0.00 3.02
6432 8865 6.263617 CCAGTAACTTTAAAGTTTGGGCACTA 59.736 38.462 32.37 13.84 46.52 2.74
6434 8867 5.163488 ACCAGTAACTTTAAAGTTTGGGCAC 60.163 40.000 34.31 26.72 46.52 5.01
6446 8879 4.038282 TGCTGTTCTCGACCAGTAACTTTA 59.962 41.667 4.48 0.00 0.00 1.85
6448 8881 2.364324 TGCTGTTCTCGACCAGTAACTT 59.636 45.455 4.48 0.00 0.00 2.66
6526 8960 5.357878 TCCATGATTCATGTCCAAGTTAAGC 59.642 40.000 21.95 0.00 39.94 3.09
6529 8963 9.473007 TTTAATCCATGATTCATGTCCAAGTTA 57.527 29.630 21.95 10.43 39.94 2.24
6575 9009 4.101741 AGGCTGCGTAAGGAATCTCTTATT 59.898 41.667 0.00 0.00 37.09 1.40
6586 9020 1.097547 CCATTGGAGGCTGCGTAAGG 61.098 60.000 0.35 0.00 38.28 2.69
6678 9786 1.621814 TGGTCGCCTTACTTTAGTGCT 59.378 47.619 0.00 0.00 0.00 4.40
6718 9826 4.003648 CTCGACCTGGAAAAAGCTTACAT 58.996 43.478 0.00 0.00 0.00 2.29
6721 9829 2.423577 GCTCGACCTGGAAAAAGCTTA 58.576 47.619 0.00 0.00 0.00 3.09
6728 9836 1.602237 GGATGGCTCGACCTGGAAA 59.398 57.895 0.00 0.00 40.22 3.13
6883 9991 2.475111 ACATTAGTCGTGTGTCAAAGCG 59.525 45.455 0.00 0.00 0.00 4.68
7149 10259 8.991275 AAGCCATTATTTGGATGAAAGGAATAA 58.009 29.630 0.00 0.00 45.64 1.40
7198 10308 6.581171 AAAAAGATCAAAGAGCTTGGTAGG 57.419 37.500 0.00 0.00 37.30 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.