Multiple sequence alignment - TraesCS1B01G390500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G390500 chr1B 100.000 3104 0 0 1 3104 623961212 623964315 0.000000e+00 5733.0
1 TraesCS1B01G390500 chr1B 90.689 1858 139 21 632 2468 623771710 623769866 0.000000e+00 2442.0
2 TraesCS1B01G390500 chr1B 83.679 386 57 4 698 1082 623952602 623952222 2.940000e-95 359.0
3 TraesCS1B01G390500 chr1B 82.329 249 33 6 2554 2793 623769756 623769510 4.060000e-49 206.0
4 TraesCS1B01G390500 chr1A 95.601 1955 69 4 907 2845 548437680 548439633 0.000000e+00 3118.0
5 TraesCS1B01G390500 chr1A 90.549 1841 143 20 644 2468 547982023 547980198 0.000000e+00 2407.0
6 TraesCS1B01G390500 chr1A 82.952 481 40 7 437 878 548437213 548437690 2.240000e-106 396.0
7 TraesCS1B01G390500 chr1A 90.323 62 5 1 60 120 548442757 548442818 2.570000e-11 80.5
8 TraesCS1B01G390500 chr1D 89.226 1550 135 20 585 2115 453293596 453292060 0.000000e+00 1908.0
9 TraesCS1B01G390500 chr1D 83.521 267 33 5 2228 2490 453292037 453291778 4.000000e-59 239.0
10 TraesCS1B01G390500 chr7D 81.295 139 22 4 1016 1152 581289827 581289963 3.270000e-20 110.0
11 TraesCS1B01G390500 chr7D 91.139 79 7 0 1016 1094 581284203 581284281 1.180000e-19 108.0
12 TraesCS1B01G390500 chr7B 80.255 157 21 8 1003 1152 648783103 648783256 3.270000e-20 110.0
13 TraesCS1B01G390500 chr7B 80.576 139 23 4 1016 1152 648916783 648916919 1.520000e-18 104.0
14 TraesCS1B01G390500 chr7A 80.714 140 23 4 1016 1153 673244078 673244215 4.230000e-19 106.0
15 TraesCS1B01G390500 chr6A 96.970 33 1 0 3058 3090 299306750 299306782 4.320000e-04 56.5
16 TraesCS1B01G390500 chr3D 100.000 29 0 0 3060 3088 575331753 575331725 2.000000e-03 54.7
17 TraesCS1B01G390500 chr5B 96.774 31 1 0 3060 3090 531557375 531557405 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G390500 chr1B 623961212 623964315 3103 False 5733.000000 5733 100.000000 1 3104 1 chr1B.!!$F1 3103
1 TraesCS1B01G390500 chr1B 623769510 623771710 2200 True 1324.000000 2442 86.509000 632 2793 2 chr1B.!!$R2 2161
2 TraesCS1B01G390500 chr1A 547980198 547982023 1825 True 2407.000000 2407 90.549000 644 2468 1 chr1A.!!$R1 1824
3 TraesCS1B01G390500 chr1A 548437213 548442818 5605 False 1198.166667 3118 89.625333 60 2845 3 chr1A.!!$F1 2785
4 TraesCS1B01G390500 chr1D 453291778 453293596 1818 True 1073.500000 1908 86.373500 585 2490 2 chr1D.!!$R1 1905

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
323 324 0.037975 ACGCTCGTCAAATAACGGGT 60.038 50.0 0.0 0.0 44.97 5.28 F
325 326 0.096454 GCTCGTCAAATAACGGGTGC 59.904 55.0 0.0 0.0 44.97 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1702 1760 0.109342 ACAGTGCCAAGTTCAGGGAG 59.891 55.0 0.0 0.0 0.0 4.30 R
2292 2367 2.622064 ACAAGAAGGGTCACACTCAC 57.378 50.0 0.0 0.0 0.0 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.281727 TCTCAGTTCCAAACACTTGCT 57.718 42.857 0.00 0.00 0.00 3.91
23 24 2.945008 TCTCAGTTCCAAACACTTGCTG 59.055 45.455 0.00 0.00 0.00 4.41
24 25 2.684881 CTCAGTTCCAAACACTTGCTGT 59.315 45.455 0.00 0.00 32.89 4.40
25 26 2.682856 TCAGTTCCAAACACTTGCTGTC 59.317 45.455 0.00 0.00 30.29 3.51
26 27 2.024414 AGTTCCAAACACTTGCTGTCC 58.976 47.619 0.00 0.00 30.29 4.02
27 28 1.748493 GTTCCAAACACTTGCTGTCCA 59.252 47.619 0.00 0.00 30.29 4.02
28 29 2.136298 TCCAAACACTTGCTGTCCAA 57.864 45.000 0.00 0.00 30.29 3.53
29 30 1.748493 TCCAAACACTTGCTGTCCAAC 59.252 47.619 0.00 0.00 30.29 3.77
30 31 1.202405 CCAAACACTTGCTGTCCAACC 60.202 52.381 0.00 0.00 30.29 3.77
31 32 1.750778 CAAACACTTGCTGTCCAACCT 59.249 47.619 0.00 0.00 30.29 3.50
32 33 1.392589 AACACTTGCTGTCCAACCTG 58.607 50.000 0.00 0.00 30.29 4.00
33 34 0.255890 ACACTTGCTGTCCAACCTGT 59.744 50.000 0.00 0.00 0.00 4.00
34 35 0.664761 CACTTGCTGTCCAACCTGTG 59.335 55.000 0.00 0.00 0.00 3.66
35 36 0.546122 ACTTGCTGTCCAACCTGTGA 59.454 50.000 0.00 0.00 0.00 3.58
36 37 1.143684 ACTTGCTGTCCAACCTGTGAT 59.856 47.619 0.00 0.00 0.00 3.06
37 38 2.233271 CTTGCTGTCCAACCTGTGATT 58.767 47.619 0.00 0.00 0.00 2.57
38 39 1.608055 TGCTGTCCAACCTGTGATTG 58.392 50.000 0.00 0.00 0.00 2.67
39 40 1.133823 TGCTGTCCAACCTGTGATTGT 60.134 47.619 0.00 0.00 0.00 2.71
40 41 1.956477 GCTGTCCAACCTGTGATTGTT 59.044 47.619 0.00 0.00 0.00 2.83
41 42 2.287788 GCTGTCCAACCTGTGATTGTTG 60.288 50.000 0.00 0.00 41.13 3.33
42 43 1.680735 TGTCCAACCTGTGATTGTTGC 59.319 47.619 0.00 0.00 40.34 4.17
43 44 1.000274 GTCCAACCTGTGATTGTTGCC 60.000 52.381 0.00 0.00 40.34 4.52
44 45 0.039256 CCAACCTGTGATTGTTGCCG 60.039 55.000 0.00 0.00 40.34 5.69
45 46 0.667993 CAACCTGTGATTGTTGCCGT 59.332 50.000 0.00 0.00 35.87 5.68
46 47 1.066908 CAACCTGTGATTGTTGCCGTT 59.933 47.619 0.00 0.00 35.87 4.44
47 48 2.264005 ACCTGTGATTGTTGCCGTTA 57.736 45.000 0.00 0.00 0.00 3.18
48 49 2.577700 ACCTGTGATTGTTGCCGTTAA 58.422 42.857 0.00 0.00 0.00 2.01
49 50 2.552315 ACCTGTGATTGTTGCCGTTAAG 59.448 45.455 0.00 0.00 0.00 1.85
50 51 2.552315 CCTGTGATTGTTGCCGTTAAGT 59.448 45.455 0.00 0.00 0.00 2.24
51 52 3.749088 CCTGTGATTGTTGCCGTTAAGTA 59.251 43.478 0.00 0.00 0.00 2.24
52 53 4.378046 CCTGTGATTGTTGCCGTTAAGTAC 60.378 45.833 0.00 0.00 0.00 2.73
53 54 4.382291 TGTGATTGTTGCCGTTAAGTACT 58.618 39.130 0.00 0.00 0.00 2.73
54 55 4.817464 TGTGATTGTTGCCGTTAAGTACTT 59.183 37.500 13.68 13.68 0.00 2.24
55 56 5.990386 TGTGATTGTTGCCGTTAAGTACTTA 59.010 36.000 11.38 11.38 0.00 2.24
56 57 6.651643 TGTGATTGTTGCCGTTAAGTACTTAT 59.348 34.615 15.92 0.00 0.00 1.73
57 58 7.148540 TGTGATTGTTGCCGTTAAGTACTTATC 60.149 37.037 15.92 13.74 0.00 1.75
58 59 6.314400 TGATTGTTGCCGTTAAGTACTTATCC 59.686 38.462 15.92 9.01 0.00 2.59
59 60 5.410355 TGTTGCCGTTAAGTACTTATCCT 57.590 39.130 15.92 0.00 0.00 3.24
60 61 5.172934 TGTTGCCGTTAAGTACTTATCCTG 58.827 41.667 15.92 9.14 0.00 3.86
61 62 4.395959 TGCCGTTAAGTACTTATCCTGG 57.604 45.455 15.92 14.83 0.00 4.45
62 63 4.025360 TGCCGTTAAGTACTTATCCTGGA 58.975 43.478 15.92 0.00 0.00 3.86
63 64 4.467082 TGCCGTTAAGTACTTATCCTGGAA 59.533 41.667 15.92 7.65 0.00 3.53
64 65 4.807834 GCCGTTAAGTACTTATCCTGGAAC 59.192 45.833 15.92 10.03 0.00 3.62
65 66 5.354767 CCGTTAAGTACTTATCCTGGAACC 58.645 45.833 15.92 0.00 0.00 3.62
66 67 5.105228 CCGTTAAGTACTTATCCTGGAACCA 60.105 44.000 15.92 0.00 0.00 3.67
67 68 5.809051 CGTTAAGTACTTATCCTGGAACCAC 59.191 44.000 15.92 6.46 0.00 4.16
68 69 6.350780 CGTTAAGTACTTATCCTGGAACCACT 60.351 42.308 15.92 0.00 0.00 4.00
69 70 7.392418 GTTAAGTACTTATCCTGGAACCACTT 58.608 38.462 15.92 8.77 0.00 3.16
70 71 5.422214 AGTACTTATCCTGGAACCACTTG 57.578 43.478 0.00 0.00 0.00 3.16
71 72 5.091552 AGTACTTATCCTGGAACCACTTGA 58.908 41.667 0.00 0.00 0.00 3.02
72 73 5.726793 AGTACTTATCCTGGAACCACTTGAT 59.273 40.000 0.00 0.00 0.00 2.57
73 74 4.848357 ACTTATCCTGGAACCACTTGATG 58.152 43.478 0.00 0.00 0.00 3.07
74 75 4.289672 ACTTATCCTGGAACCACTTGATGT 59.710 41.667 0.00 0.00 0.00 3.06
75 76 5.487488 ACTTATCCTGGAACCACTTGATGTA 59.513 40.000 0.00 0.00 0.00 2.29
76 77 3.695830 TCCTGGAACCACTTGATGTAC 57.304 47.619 0.00 0.00 0.00 2.90
77 78 3.248024 TCCTGGAACCACTTGATGTACT 58.752 45.455 0.00 0.00 0.00 2.73
78 79 3.260884 TCCTGGAACCACTTGATGTACTC 59.739 47.826 0.00 0.00 0.00 2.59
79 80 3.261897 CCTGGAACCACTTGATGTACTCT 59.738 47.826 0.00 0.00 0.00 3.24
80 81 4.499183 CTGGAACCACTTGATGTACTCTC 58.501 47.826 0.00 0.00 0.00 3.20
81 82 4.160329 TGGAACCACTTGATGTACTCTCT 58.840 43.478 0.00 0.00 0.00 3.10
82 83 4.593206 TGGAACCACTTGATGTACTCTCTT 59.407 41.667 0.00 0.00 0.00 2.85
83 84 5.071788 TGGAACCACTTGATGTACTCTCTTT 59.928 40.000 0.00 0.00 0.00 2.52
84 85 5.639931 GGAACCACTTGATGTACTCTCTTTC 59.360 44.000 0.00 0.00 0.00 2.62
85 86 5.153950 ACCACTTGATGTACTCTCTTTCC 57.846 43.478 0.00 0.00 0.00 3.13
86 87 4.841246 ACCACTTGATGTACTCTCTTTCCT 59.159 41.667 0.00 0.00 0.00 3.36
87 88 5.046950 ACCACTTGATGTACTCTCTTTCCTC 60.047 44.000 0.00 0.00 0.00 3.71
88 89 5.186797 CCACTTGATGTACTCTCTTTCCTCT 59.813 44.000 0.00 0.00 0.00 3.69
89 90 6.329496 CACTTGATGTACTCTCTTTCCTCTC 58.671 44.000 0.00 0.00 0.00 3.20
90 91 6.152661 CACTTGATGTACTCTCTTTCCTCTCT 59.847 42.308 0.00 0.00 0.00 3.10
91 92 6.723977 ACTTGATGTACTCTCTTTCCTCTCTT 59.276 38.462 0.00 0.00 0.00 2.85
92 93 6.767524 TGATGTACTCTCTTTCCTCTCTTC 57.232 41.667 0.00 0.00 0.00 2.87
93 94 6.489603 TGATGTACTCTCTTTCCTCTCTTCT 58.510 40.000 0.00 0.00 0.00 2.85
94 95 6.951198 TGATGTACTCTCTTTCCTCTCTTCTT 59.049 38.462 0.00 0.00 0.00 2.52
95 96 7.453126 TGATGTACTCTCTTTCCTCTCTTCTTT 59.547 37.037 0.00 0.00 0.00 2.52
96 97 7.604657 TGTACTCTCTTTCCTCTCTTCTTTT 57.395 36.000 0.00 0.00 0.00 2.27
97 98 7.437748 TGTACTCTCTTTCCTCTCTTCTTTTG 58.562 38.462 0.00 0.00 0.00 2.44
98 99 5.304778 ACTCTCTTTCCTCTCTTCTTTTGC 58.695 41.667 0.00 0.00 0.00 3.68
99 100 5.163258 ACTCTCTTTCCTCTCTTCTTTTGCA 60.163 40.000 0.00 0.00 0.00 4.08
100 101 5.303971 TCTCTTTCCTCTCTTCTTTTGCAG 58.696 41.667 0.00 0.00 0.00 4.41
101 102 5.070981 TCTCTTTCCTCTCTTCTTTTGCAGA 59.929 40.000 0.00 0.00 0.00 4.26
102 103 5.303971 TCTTTCCTCTCTTCTTTTGCAGAG 58.696 41.667 0.00 0.00 40.43 3.35
103 104 4.696479 TTCCTCTCTTCTTTTGCAGAGT 57.304 40.909 0.00 0.00 40.08 3.24
104 105 4.696479 TCCTCTCTTCTTTTGCAGAGTT 57.304 40.909 0.00 0.00 40.08 3.01
105 106 5.808366 TCCTCTCTTCTTTTGCAGAGTTA 57.192 39.130 0.00 0.00 40.08 2.24
106 107 6.174720 TCCTCTCTTCTTTTGCAGAGTTAA 57.825 37.500 0.00 0.00 40.08 2.01
107 108 6.591935 TCCTCTCTTCTTTTGCAGAGTTAAA 58.408 36.000 0.00 0.00 40.08 1.52
108 109 6.708054 TCCTCTCTTCTTTTGCAGAGTTAAAG 59.292 38.462 2.05 2.05 40.08 1.85
109 110 6.708054 CCTCTCTTCTTTTGCAGAGTTAAAGA 59.292 38.462 6.45 6.45 40.08 2.52
110 111 7.095271 CCTCTCTTCTTTTGCAGAGTTAAAGAG 60.095 40.741 9.74 13.15 40.08 2.85
111 112 6.708054 TCTCTTCTTTTGCAGAGTTAAAGAGG 59.292 38.462 18.55 15.65 40.08 3.69
112 113 6.591935 TCTTCTTTTGCAGAGTTAAAGAGGA 58.408 36.000 14.98 14.98 39.88 3.71
113 114 6.708054 TCTTCTTTTGCAGAGTTAAAGAGGAG 59.292 38.462 14.98 9.55 38.36 3.69
114 115 4.757149 TCTTTTGCAGAGTTAAAGAGGAGC 59.243 41.667 6.45 0.00 34.07 4.70
115 116 3.769739 TTGCAGAGTTAAAGAGGAGCA 57.230 42.857 0.00 0.00 0.00 4.26
116 117 3.325293 TGCAGAGTTAAAGAGGAGCAG 57.675 47.619 0.00 0.00 0.00 4.24
117 118 2.006169 GCAGAGTTAAAGAGGAGCAGC 58.994 52.381 0.00 0.00 0.00 5.25
118 119 2.354604 GCAGAGTTAAAGAGGAGCAGCT 60.355 50.000 0.00 0.00 0.00 4.24
119 120 3.867984 GCAGAGTTAAAGAGGAGCAGCTT 60.868 47.826 0.00 0.00 0.00 3.74
120 121 3.932089 CAGAGTTAAAGAGGAGCAGCTTC 59.068 47.826 0.00 0.00 0.00 3.86
121 122 3.837731 AGAGTTAAAGAGGAGCAGCTTCT 59.162 43.478 1.44 1.44 33.84 2.85
122 123 4.285775 AGAGTTAAAGAGGAGCAGCTTCTT 59.714 41.667 4.13 3.93 43.96 2.52
124 125 5.000591 AGTTAAAGAGGAGCAGCTTCTTTC 58.999 41.667 20.72 11.03 46.34 2.62
125 126 3.498774 AAAGAGGAGCAGCTTCTTTCA 57.501 42.857 14.12 0.00 46.34 2.69
126 127 3.717452 AAGAGGAGCAGCTTCTTTCAT 57.283 42.857 4.13 0.00 39.65 2.57
127 128 3.264998 AGAGGAGCAGCTTCTTTCATC 57.735 47.619 4.13 0.00 26.48 2.92
128 129 2.839425 AGAGGAGCAGCTTCTTTCATCT 59.161 45.455 4.13 0.00 26.48 2.90
129 130 2.937799 GAGGAGCAGCTTCTTTCATCTG 59.062 50.000 4.13 0.00 0.00 2.90
130 131 2.570752 AGGAGCAGCTTCTTTCATCTGA 59.429 45.455 0.00 0.00 0.00 3.27
131 132 3.008813 AGGAGCAGCTTCTTTCATCTGAA 59.991 43.478 0.00 0.00 0.00 3.02
132 133 3.755378 GGAGCAGCTTCTTTCATCTGAAA 59.245 43.478 0.00 5.33 41.29 2.69
133 134 4.217118 GGAGCAGCTTCTTTCATCTGAAAA 59.783 41.667 0.00 0.00 42.72 2.29
134 135 5.278660 GGAGCAGCTTCTTTCATCTGAAAAA 60.279 40.000 0.00 4.31 42.72 1.94
155 156 1.792006 AAAACGAGGAGCAGGTTACG 58.208 50.000 0.00 0.00 0.00 3.18
156 157 0.677842 AAACGAGGAGCAGGTTACGT 59.322 50.000 0.00 0.00 35.56 3.57
157 158 0.677842 AACGAGGAGCAGGTTACGTT 59.322 50.000 0.00 0.00 38.72 3.99
158 159 0.243095 ACGAGGAGCAGGTTACGTTC 59.757 55.000 0.00 0.00 0.00 3.95
159 160 0.242825 CGAGGAGCAGGTTACGTTCA 59.757 55.000 0.00 0.00 0.00 3.18
160 161 1.711206 GAGGAGCAGGTTACGTTCAC 58.289 55.000 0.00 0.00 0.00 3.18
161 162 1.000506 GAGGAGCAGGTTACGTTCACA 59.999 52.381 0.00 0.00 0.00 3.58
162 163 1.623811 AGGAGCAGGTTACGTTCACAT 59.376 47.619 0.00 0.00 0.00 3.21
163 164 2.038557 AGGAGCAGGTTACGTTCACATT 59.961 45.455 0.00 0.00 0.00 2.71
164 165 3.259876 AGGAGCAGGTTACGTTCACATTA 59.740 43.478 0.00 0.00 0.00 1.90
165 166 3.998341 GGAGCAGGTTACGTTCACATTAA 59.002 43.478 0.00 0.00 0.00 1.40
166 167 4.092968 GGAGCAGGTTACGTTCACATTAAG 59.907 45.833 0.00 0.00 0.00 1.85
167 168 3.435671 AGCAGGTTACGTTCACATTAAGC 59.564 43.478 0.00 0.00 0.00 3.09
168 169 3.187637 GCAGGTTACGTTCACATTAAGCA 59.812 43.478 0.00 0.00 0.00 3.91
169 170 4.142687 GCAGGTTACGTTCACATTAAGCAT 60.143 41.667 0.00 0.00 0.00 3.79
170 171 5.560148 CAGGTTACGTTCACATTAAGCATC 58.440 41.667 0.00 0.00 0.00 3.91
171 172 5.351465 CAGGTTACGTTCACATTAAGCATCT 59.649 40.000 0.00 0.00 0.00 2.90
172 173 5.938125 AGGTTACGTTCACATTAAGCATCTT 59.062 36.000 0.00 0.00 0.00 2.40
173 174 6.092259 AGGTTACGTTCACATTAAGCATCTTC 59.908 38.462 0.00 0.00 0.00 2.87
174 175 4.946784 ACGTTCACATTAAGCATCTTCC 57.053 40.909 0.00 0.00 0.00 3.46
175 176 3.689649 ACGTTCACATTAAGCATCTTCCC 59.310 43.478 0.00 0.00 0.00 3.97
176 177 3.689161 CGTTCACATTAAGCATCTTCCCA 59.311 43.478 0.00 0.00 0.00 4.37
177 178 4.336433 CGTTCACATTAAGCATCTTCCCAT 59.664 41.667 0.00 0.00 0.00 4.00
178 179 5.527214 CGTTCACATTAAGCATCTTCCCATA 59.473 40.000 0.00 0.00 0.00 2.74
179 180 6.205464 CGTTCACATTAAGCATCTTCCCATAT 59.795 38.462 0.00 0.00 0.00 1.78
180 181 7.255242 CGTTCACATTAAGCATCTTCCCATATT 60.255 37.037 0.00 0.00 0.00 1.28
181 182 9.066892 GTTCACATTAAGCATCTTCCCATATTA 57.933 33.333 0.00 0.00 0.00 0.98
182 183 8.853077 TCACATTAAGCATCTTCCCATATTAG 57.147 34.615 0.00 0.00 0.00 1.73
183 184 7.391554 TCACATTAAGCATCTTCCCATATTAGC 59.608 37.037 0.00 0.00 0.00 3.09
184 185 7.175467 CACATTAAGCATCTTCCCATATTAGCA 59.825 37.037 0.00 0.00 0.00 3.49
185 186 7.175641 ACATTAAGCATCTTCCCATATTAGCAC 59.824 37.037 0.00 0.00 0.00 4.40
186 187 4.712051 AGCATCTTCCCATATTAGCACA 57.288 40.909 0.00 0.00 0.00 4.57
187 188 5.052693 AGCATCTTCCCATATTAGCACAA 57.947 39.130 0.00 0.00 0.00 3.33
188 189 5.448654 AGCATCTTCCCATATTAGCACAAA 58.551 37.500 0.00 0.00 0.00 2.83
189 190 6.073314 AGCATCTTCCCATATTAGCACAAAT 58.927 36.000 0.00 0.00 0.00 2.32
190 191 6.552350 AGCATCTTCCCATATTAGCACAAATT 59.448 34.615 0.00 0.00 0.00 1.82
191 192 7.725397 AGCATCTTCCCATATTAGCACAAATTA 59.275 33.333 0.00 0.00 0.00 1.40
192 193 8.526147 GCATCTTCCCATATTAGCACAAATTAT 58.474 33.333 0.00 0.00 0.00 1.28
204 205 9.686683 ATTAGCACAAATTATAAAGAGTCCACT 57.313 29.630 0.00 0.00 0.00 4.00
207 208 9.686683 AGCACAAATTATAAAGAGTCCACTAAT 57.313 29.630 0.00 0.00 0.00 1.73
218 219 8.773404 AAAGAGTCCACTAATACAATGTACAC 57.227 34.615 0.00 0.00 0.00 2.90
219 220 7.476540 AGAGTCCACTAATACAATGTACACA 57.523 36.000 0.00 0.00 0.00 3.72
220 221 7.321153 AGAGTCCACTAATACAATGTACACAC 58.679 38.462 0.00 0.00 0.00 3.82
221 222 7.178628 AGAGTCCACTAATACAATGTACACACT 59.821 37.037 0.00 0.00 0.00 3.55
222 223 7.676947 AGTCCACTAATACAATGTACACACTT 58.323 34.615 0.00 0.00 0.00 3.16
223 224 7.817962 AGTCCACTAATACAATGTACACACTTC 59.182 37.037 0.00 0.00 0.00 3.01
224 225 7.064253 GTCCACTAATACAATGTACACACTTCC 59.936 40.741 0.00 0.00 0.00 3.46
225 226 6.876789 CCACTAATACAATGTACACACTTCCA 59.123 38.462 0.00 0.00 0.00 3.53
226 227 7.552687 CCACTAATACAATGTACACACTTCCAT 59.447 37.037 0.00 0.00 0.00 3.41
227 228 9.594478 CACTAATACAATGTACACACTTCCATA 57.406 33.333 0.00 0.00 0.00 2.74
254 255 6.772360 AAAAACCAAACTTCATTGCCAAAT 57.228 29.167 0.00 0.00 0.00 2.32
255 256 6.375945 AAAACCAAACTTCATTGCCAAATC 57.624 33.333 0.00 0.00 0.00 2.17
256 257 4.006780 ACCAAACTTCATTGCCAAATCC 57.993 40.909 0.00 0.00 0.00 3.01
257 258 3.244526 ACCAAACTTCATTGCCAAATCCC 60.245 43.478 0.00 0.00 0.00 3.85
258 259 3.244491 CCAAACTTCATTGCCAAATCCCA 60.244 43.478 0.00 0.00 0.00 4.37
259 260 3.967332 AACTTCATTGCCAAATCCCAG 57.033 42.857 0.00 0.00 0.00 4.45
260 261 3.173953 ACTTCATTGCCAAATCCCAGA 57.826 42.857 0.00 0.00 0.00 3.86
261 262 3.716431 ACTTCATTGCCAAATCCCAGAT 58.284 40.909 0.00 0.00 0.00 2.90
262 263 4.098894 ACTTCATTGCCAAATCCCAGATT 58.901 39.130 0.00 0.00 0.00 2.40
263 264 4.533311 ACTTCATTGCCAAATCCCAGATTT 59.467 37.500 0.00 0.00 0.00 2.17
264 265 5.013391 ACTTCATTGCCAAATCCCAGATTTT 59.987 36.000 0.00 0.00 0.00 1.82
265 266 6.213195 ACTTCATTGCCAAATCCCAGATTTTA 59.787 34.615 0.00 0.00 0.00 1.52
266 267 6.811634 TCATTGCCAAATCCCAGATTTTAT 57.188 33.333 0.00 0.00 0.00 1.40
267 268 7.911130 TCATTGCCAAATCCCAGATTTTATA 57.089 32.000 0.00 0.00 0.00 0.98
268 269 8.316497 TCATTGCCAAATCCCAGATTTTATAA 57.684 30.769 0.00 0.00 0.00 0.98
269 270 8.423349 TCATTGCCAAATCCCAGATTTTATAAG 58.577 33.333 0.00 0.00 0.00 1.73
270 271 7.969690 TTGCCAAATCCCAGATTTTATAAGA 57.030 32.000 0.00 0.00 0.00 2.10
271 272 7.587037 TGCCAAATCCCAGATTTTATAAGAG 57.413 36.000 0.00 0.00 0.00 2.85
272 273 7.353525 TGCCAAATCCCAGATTTTATAAGAGA 58.646 34.615 0.00 0.00 0.00 3.10
273 274 7.503566 TGCCAAATCCCAGATTTTATAAGAGAG 59.496 37.037 0.00 0.00 0.00 3.20
274 275 7.522889 GCCAAATCCCAGATTTTATAAGAGAGC 60.523 40.741 0.00 0.00 0.00 4.09
275 276 7.503566 CCAAATCCCAGATTTTATAAGAGAGCA 59.496 37.037 0.00 0.00 0.00 4.26
276 277 9.075678 CAAATCCCAGATTTTATAAGAGAGCAT 57.924 33.333 0.00 0.00 0.00 3.79
278 279 9.956640 AATCCCAGATTTTATAAGAGAGCATAG 57.043 33.333 0.00 0.00 0.00 2.23
279 280 8.497910 TCCCAGATTTTATAAGAGAGCATAGT 57.502 34.615 0.00 0.00 0.00 2.12
280 281 8.370940 TCCCAGATTTTATAAGAGAGCATAGTG 58.629 37.037 0.00 0.00 0.00 2.74
281 282 7.118971 CCCAGATTTTATAAGAGAGCATAGTGC 59.881 40.741 0.00 0.00 45.46 4.40
296 297 5.091910 CATAGTGCATGCTATGTTGTCTG 57.908 43.478 20.33 0.70 41.86 3.51
297 298 2.362736 AGTGCATGCTATGTTGTCTGG 58.637 47.619 20.33 0.00 0.00 3.86
298 299 2.086869 GTGCATGCTATGTTGTCTGGT 58.913 47.619 20.33 0.00 0.00 4.00
299 300 2.096496 GTGCATGCTATGTTGTCTGGTC 59.904 50.000 20.33 0.00 0.00 4.02
300 301 1.328680 GCATGCTATGTTGTCTGGTCG 59.671 52.381 11.37 0.00 0.00 4.79
301 302 1.328680 CATGCTATGTTGTCTGGTCGC 59.671 52.381 0.00 0.00 0.00 5.19
302 303 0.320050 TGCTATGTTGTCTGGTCGCA 59.680 50.000 0.00 0.00 0.00 5.10
303 304 1.066215 TGCTATGTTGTCTGGTCGCAT 60.066 47.619 0.00 0.00 0.00 4.73
304 305 2.167487 TGCTATGTTGTCTGGTCGCATA 59.833 45.455 0.00 0.00 0.00 3.14
305 306 2.540101 GCTATGTTGTCTGGTCGCATAC 59.460 50.000 0.00 0.00 0.00 2.39
306 307 1.640428 ATGTTGTCTGGTCGCATACG 58.360 50.000 0.00 0.00 42.01 3.06
307 308 1.011968 TGTTGTCTGGTCGCATACGC 61.012 55.000 0.00 0.00 39.84 4.42
308 309 0.736325 GTTGTCTGGTCGCATACGCT 60.736 55.000 0.00 0.00 39.84 5.07
309 310 0.457853 TTGTCTGGTCGCATACGCTC 60.458 55.000 0.00 0.00 39.84 5.03
310 311 1.939785 GTCTGGTCGCATACGCTCG 60.940 63.158 0.00 0.00 39.84 5.03
311 312 2.102357 CTGGTCGCATACGCTCGT 59.898 61.111 0.00 0.00 39.84 4.18
312 313 1.939785 CTGGTCGCATACGCTCGTC 60.940 63.158 0.00 0.00 39.84 4.20
313 314 2.101575 GGTCGCATACGCTCGTCA 59.898 61.111 0.00 0.00 39.84 4.35
314 315 1.515519 GGTCGCATACGCTCGTCAA 60.516 57.895 0.00 0.00 39.84 3.18
315 316 1.074319 GGTCGCATACGCTCGTCAAA 61.074 55.000 0.00 0.00 39.84 2.69
316 317 0.921347 GTCGCATACGCTCGTCAAAT 59.079 50.000 0.00 0.00 39.84 2.32
317 318 2.114056 GTCGCATACGCTCGTCAAATA 58.886 47.619 0.00 0.00 39.84 1.40
318 319 2.532723 GTCGCATACGCTCGTCAAATAA 59.467 45.455 0.00 0.00 39.84 1.40
319 320 2.532723 TCGCATACGCTCGTCAAATAAC 59.467 45.455 0.00 0.00 39.84 1.89
320 321 2.652960 CGCATACGCTCGTCAAATAACG 60.653 50.000 0.00 0.00 43.92 3.18
321 322 2.347292 GCATACGCTCGTCAAATAACGG 60.347 50.000 0.00 0.00 42.80 4.44
322 323 1.912001 TACGCTCGTCAAATAACGGG 58.088 50.000 0.00 0.00 45.94 5.28
323 324 0.037975 ACGCTCGTCAAATAACGGGT 60.038 50.000 0.00 0.00 44.97 5.28
324 325 0.368907 CGCTCGTCAAATAACGGGTG 59.631 55.000 0.00 0.00 45.91 4.61
325 326 0.096454 GCTCGTCAAATAACGGGTGC 59.904 55.000 0.00 0.00 44.97 5.01
326 327 0.725117 CTCGTCAAATAACGGGTGCC 59.275 55.000 0.00 0.00 42.80 5.01
327 328 0.322322 TCGTCAAATAACGGGTGCCT 59.678 50.000 0.00 0.00 42.80 4.75
328 329 1.161843 CGTCAAATAACGGGTGCCTT 58.838 50.000 0.00 0.00 38.96 4.35
329 330 1.538075 CGTCAAATAACGGGTGCCTTT 59.462 47.619 0.00 0.00 38.96 3.11
330 331 2.743126 CGTCAAATAACGGGTGCCTTTA 59.257 45.455 0.00 0.00 38.96 1.85
331 332 3.425227 CGTCAAATAACGGGTGCCTTTAC 60.425 47.826 0.00 0.00 38.96 2.01
332 333 3.502979 GTCAAATAACGGGTGCCTTTACA 59.497 43.478 0.00 0.00 0.00 2.41
333 334 3.502979 TCAAATAACGGGTGCCTTTACAC 59.497 43.478 0.00 0.00 39.94 2.90
334 335 2.863132 ATAACGGGTGCCTTTACACA 57.137 45.000 0.00 0.00 42.55 3.72
335 336 2.634815 TAACGGGTGCCTTTACACAA 57.365 45.000 0.00 0.00 42.55 3.33
336 337 1.765230 AACGGGTGCCTTTACACAAA 58.235 45.000 0.00 0.00 42.55 2.83
337 338 1.989706 ACGGGTGCCTTTACACAAAT 58.010 45.000 0.00 0.00 42.55 2.32
338 339 2.312390 ACGGGTGCCTTTACACAAATT 58.688 42.857 0.00 0.00 42.55 1.82
339 340 2.696187 ACGGGTGCCTTTACACAAATTT 59.304 40.909 0.00 0.00 42.55 1.82
340 341 3.056304 CGGGTGCCTTTACACAAATTTG 58.944 45.455 16.67 16.67 42.55 2.32
341 342 3.398406 GGGTGCCTTTACACAAATTTGG 58.602 45.455 21.74 12.94 42.55 3.28
342 343 3.181459 GGGTGCCTTTACACAAATTTGGT 60.181 43.478 21.74 17.44 42.55 3.67
343 344 3.807071 GGTGCCTTTACACAAATTTGGTG 59.193 43.478 21.74 17.85 42.55 4.17
345 346 4.873259 GTGCCTTTACACAAATTTGGTGTT 59.127 37.500 21.74 5.85 46.75 3.32
346 347 5.352846 GTGCCTTTACACAAATTTGGTGTTT 59.647 36.000 21.74 6.23 46.75 2.83
347 348 5.940470 TGCCTTTACACAAATTTGGTGTTTT 59.060 32.000 21.74 5.65 46.75 2.43
348 349 6.431234 TGCCTTTACACAAATTTGGTGTTTTT 59.569 30.769 21.74 5.36 46.75 1.94
349 350 6.964370 GCCTTTACACAAATTTGGTGTTTTTC 59.036 34.615 21.74 8.96 46.75 2.29
350 351 7.148323 GCCTTTACACAAATTTGGTGTTTTTCT 60.148 33.333 21.74 4.48 46.75 2.52
351 352 8.726068 CCTTTACACAAATTTGGTGTTTTTCTT 58.274 29.630 21.74 3.90 46.75 2.52
356 357 9.495572 ACACAAATTTGGTGTTTTTCTTTAGAA 57.504 25.926 21.74 0.00 46.75 2.10
357 358 9.971744 CACAAATTTGGTGTTTTTCTTTAGAAG 57.028 29.630 21.74 0.00 35.21 2.85
358 359 9.719355 ACAAATTTGGTGTTTTTCTTTAGAAGT 57.281 25.926 21.74 0.00 35.21 3.01
375 376 4.342352 GAAGTATTCAAGCCGAGTTTGG 57.658 45.455 0.00 0.00 46.62 3.28
376 377 3.695830 AGTATTCAAGCCGAGTTTGGA 57.304 42.857 0.00 0.00 0.00 3.53
377 378 4.222124 AGTATTCAAGCCGAGTTTGGAT 57.778 40.909 0.00 0.00 0.00 3.41
378 379 4.589908 AGTATTCAAGCCGAGTTTGGATT 58.410 39.130 0.92 0.00 38.38 3.01
379 380 5.010282 AGTATTCAAGCCGAGTTTGGATTT 58.990 37.500 0.92 0.00 34.87 2.17
380 381 4.871933 ATTCAAGCCGAGTTTGGATTTT 57.128 36.364 0.00 0.00 34.87 1.82
381 382 3.915437 TCAAGCCGAGTTTGGATTTTC 57.085 42.857 0.00 0.00 34.87 2.29
382 383 2.225491 TCAAGCCGAGTTTGGATTTTCG 59.775 45.455 0.00 0.00 34.87 3.46
383 384 0.521735 AGCCGAGTTTGGATTTTCGC 59.478 50.000 0.00 0.00 0.00 4.70
384 385 0.456142 GCCGAGTTTGGATTTTCGCC 60.456 55.000 0.00 0.00 0.00 5.54
385 386 1.165270 CCGAGTTTGGATTTTCGCCT 58.835 50.000 0.00 0.00 0.00 5.52
386 387 2.352388 CCGAGTTTGGATTTTCGCCTA 58.648 47.619 0.00 0.00 0.00 3.93
387 388 2.745281 CCGAGTTTGGATTTTCGCCTAA 59.255 45.455 0.00 0.00 0.00 2.69
388 389 3.377172 CCGAGTTTGGATTTTCGCCTAAT 59.623 43.478 0.00 0.00 0.00 1.73
389 390 4.573201 CCGAGTTTGGATTTTCGCCTAATA 59.427 41.667 0.00 0.00 0.00 0.98
390 391 5.065474 CCGAGTTTGGATTTTCGCCTAATAA 59.935 40.000 0.00 0.00 0.00 1.40
391 392 6.403855 CCGAGTTTGGATTTTCGCCTAATAAA 60.404 38.462 0.00 0.00 0.00 1.40
392 393 6.468000 CGAGTTTGGATTTTCGCCTAATAAAC 59.532 38.462 0.00 0.00 0.00 2.01
393 394 7.222000 AGTTTGGATTTTCGCCTAATAAACA 57.778 32.000 0.00 0.00 0.00 2.83
394 395 7.836842 AGTTTGGATTTTCGCCTAATAAACAT 58.163 30.769 0.00 0.00 0.00 2.71
395 396 8.962679 AGTTTGGATTTTCGCCTAATAAACATA 58.037 29.630 0.00 0.00 0.00 2.29
396 397 9.233232 GTTTGGATTTTCGCCTAATAAACATAG 57.767 33.333 0.00 0.00 0.00 2.23
397 398 8.514330 TTGGATTTTCGCCTAATAAACATAGT 57.486 30.769 0.00 0.00 0.00 2.12
398 399 8.514330 TGGATTTTCGCCTAATAAACATAGTT 57.486 30.769 0.00 0.00 0.00 2.24
399 400 8.402472 TGGATTTTCGCCTAATAAACATAGTTG 58.598 33.333 0.00 0.00 0.00 3.16
400 401 8.617809 GGATTTTCGCCTAATAAACATAGTTGA 58.382 33.333 0.00 0.00 0.00 3.18
401 402 9.997482 GATTTTCGCCTAATAAACATAGTTGAA 57.003 29.630 0.00 0.00 0.00 2.69
505 506 7.132128 TGAGGGAGGGAAAATAATTAAAGCAT 58.868 34.615 0.00 0.00 0.00 3.79
510 511 8.421002 GGAGGGAAAATAATTAAAGCATGCTAA 58.579 33.333 23.00 13.40 0.00 3.09
559 560 2.691011 TCTAGTTTGTTTGGGCCAACAC 59.309 45.455 20.79 19.43 0.00 3.32
562 563 1.258445 TTTGTTTGGGCCAACACGGT 61.258 50.000 20.79 0.00 36.97 4.83
568 569 0.395311 TGGGCCAACACGGTGTTTTA 60.395 50.000 23.05 6.13 38.77 1.52
598 613 1.574428 CTGCTGGGTAACGCAACAC 59.426 57.895 0.00 0.00 35.46 3.32
619 634 0.613853 AGCCCACTGTCTAGCGGTAA 60.614 55.000 0.00 0.00 34.32 2.85
647 684 0.622665 AAGCCATTCCTCCAGTCCAG 59.377 55.000 0.00 0.00 0.00 3.86
742 789 1.001860 GCAGATCCTACTGGCAGATCC 59.998 57.143 23.66 3.91 37.69 3.36
743 790 2.607499 CAGATCCTACTGGCAGATCCT 58.393 52.381 23.66 0.12 37.69 3.24
744 791 2.971330 CAGATCCTACTGGCAGATCCTT 59.029 50.000 23.66 0.00 37.69 3.36
745 792 3.390639 CAGATCCTACTGGCAGATCCTTT 59.609 47.826 23.66 0.00 37.69 3.11
763 810 3.189287 CCTTTTTCCCACTTCATCTCGTG 59.811 47.826 0.00 0.00 0.00 4.35
919 971 0.944386 GCATAATCCACCGTCGCAAT 59.056 50.000 0.00 0.00 0.00 3.56
923 975 1.086696 AATCCACCGTCGCAATCTTG 58.913 50.000 0.00 0.00 0.00 3.02
1020 1075 4.208686 CGGACGGTGGCTAGCCTC 62.209 72.222 33.07 28.77 36.94 4.70
1125 1180 1.596203 CATCATCTCGCACCCGCAT 60.596 57.895 0.00 0.00 38.40 4.73
1192 1247 4.269523 AGAGCAAGCCGGTGCCAA 62.270 61.111 13.08 0.00 46.14 4.52
1199 1254 4.740822 GCCGGTGCCAACTCCCAT 62.741 66.667 1.90 0.00 0.00 4.00
1254 1309 4.489737 TGGTCTCTCCTCTCTTTGGTTTA 58.510 43.478 0.00 0.00 37.07 2.01
1299 1354 2.281070 CTGTCCTGCTGCAACGGT 60.281 61.111 3.02 0.00 0.00 4.83
1365 1420 3.799755 GTGTGCAATCCGGCGACC 61.800 66.667 9.30 0.00 36.28 4.79
1557 1612 2.168521 TCACAAGGAGAACGGATGGATC 59.831 50.000 0.00 0.00 0.00 3.36
1865 1923 1.004185 GCATAGCACTGACGCTTCATG 60.004 52.381 0.00 0.00 43.56 3.07
2188 2249 2.549754 CCTGGCATGTTAGCTTAATCCG 59.450 50.000 0.00 0.00 34.17 4.18
2195 2256 3.869065 TGTTAGCTTAATCCGGTTCCTG 58.131 45.455 0.00 0.00 0.00 3.86
2217 2279 6.292919 CCTGTTTTCTGTTTGTAGTAGTGCTC 60.293 42.308 0.00 0.00 0.00 4.26
2292 2367 3.303938 TCTGGGAAGGAGAGATTAGCAG 58.696 50.000 0.00 0.00 0.00 4.24
2297 2372 3.704061 GGAAGGAGAGATTAGCAGTGAGT 59.296 47.826 0.00 0.00 0.00 3.41
2301 2376 3.445450 GGAGAGATTAGCAGTGAGTGTGA 59.555 47.826 0.00 0.00 0.00 3.58
2562 2685 7.095649 CGCACAGTTATAATTAGCTCTTGCATA 60.096 37.037 0.00 0.00 42.74 3.14
2592 2715 3.243336 CTGAGGCGTATTCCGTATAAGC 58.757 50.000 4.79 4.79 41.66 3.09
2597 2720 2.236690 CGTATTCCGTATAAGCGACCG 58.763 52.381 0.00 0.00 0.00 4.79
2598 2721 1.981533 GTATTCCGTATAAGCGACCGC 59.018 52.381 6.25 6.25 42.33 5.68
2751 2883 2.423538 GTCCAATTCCACCCTGATTTCG 59.576 50.000 0.00 0.00 0.00 3.46
2821 2953 2.562298 TGTTGGAATTCACTGGAATGGC 59.438 45.455 7.93 0.00 42.87 4.40
2841 2973 3.513515 GGCACAATCCAAATTTACAGGGA 59.486 43.478 0.00 0.00 0.00 4.20
2842 2974 4.020662 GGCACAATCCAAATTTACAGGGAA 60.021 41.667 0.00 0.00 32.25 3.97
2843 2975 5.512232 GGCACAATCCAAATTTACAGGGAAA 60.512 40.000 0.00 0.00 32.25 3.13
2844 2976 5.994668 GCACAATCCAAATTTACAGGGAAAA 59.005 36.000 0.00 0.00 32.25 2.29
2845 2977 6.484977 GCACAATCCAAATTTACAGGGAAAAA 59.515 34.615 0.00 0.00 32.25 1.94
2863 2995 2.645838 AAAAGAGCCTGAGTTCTGCA 57.354 45.000 0.00 0.00 33.27 4.41
2864 2996 2.645838 AAAGAGCCTGAGTTCTGCAA 57.354 45.000 0.00 0.00 33.27 4.08
2865 2997 2.875094 AAGAGCCTGAGTTCTGCAAT 57.125 45.000 0.00 0.00 33.27 3.56
2866 2998 2.399916 AGAGCCTGAGTTCTGCAATC 57.600 50.000 0.00 0.00 31.48 2.67
2867 2999 1.005340 GAGCCTGAGTTCTGCAATCG 58.995 55.000 0.00 0.00 0.00 3.34
2868 3000 0.392193 AGCCTGAGTTCTGCAATCGG 60.392 55.000 0.00 0.00 0.00 4.18
2869 3001 0.391661 GCCTGAGTTCTGCAATCGGA 60.392 55.000 0.00 0.00 0.00 4.55
2870 3002 1.745141 GCCTGAGTTCTGCAATCGGAT 60.745 52.381 0.00 0.00 0.00 4.18
2871 3003 1.938577 CCTGAGTTCTGCAATCGGATG 59.061 52.381 0.00 0.00 0.00 3.51
2872 3004 2.419159 CCTGAGTTCTGCAATCGGATGA 60.419 50.000 0.00 0.00 0.00 2.92
2873 3005 3.464907 CTGAGTTCTGCAATCGGATGAT 58.535 45.455 0.00 0.00 35.98 2.45
2874 3006 3.875727 CTGAGTTCTGCAATCGGATGATT 59.124 43.478 0.00 0.00 45.70 2.57
2875 3007 4.264253 TGAGTTCTGCAATCGGATGATTT 58.736 39.130 0.00 0.00 42.14 2.17
2876 3008 4.095334 TGAGTTCTGCAATCGGATGATTTG 59.905 41.667 0.00 0.00 42.14 2.32
2877 3009 4.012374 AGTTCTGCAATCGGATGATTTGT 58.988 39.130 0.00 0.00 42.14 2.83
2878 3010 4.095483 AGTTCTGCAATCGGATGATTTGTC 59.905 41.667 0.00 0.00 42.14 3.18
2879 3011 3.608796 TCTGCAATCGGATGATTTGTCA 58.391 40.909 0.00 0.00 42.14 3.58
2880 3012 3.624410 TCTGCAATCGGATGATTTGTCAG 59.376 43.478 0.00 0.28 42.14 3.51
2881 3013 2.684374 TGCAATCGGATGATTTGTCAGG 59.316 45.455 0.00 0.00 42.14 3.86
2882 3014 2.033801 GCAATCGGATGATTTGTCAGGG 59.966 50.000 0.00 0.00 42.14 4.45
2883 3015 3.544684 CAATCGGATGATTTGTCAGGGA 58.455 45.455 0.00 0.00 42.14 4.20
2884 3016 3.931907 ATCGGATGATTTGTCAGGGAA 57.068 42.857 0.00 0.00 0.00 3.97
2885 3017 3.712016 TCGGATGATTTGTCAGGGAAA 57.288 42.857 0.00 0.00 0.00 3.13
2886 3018 4.027674 TCGGATGATTTGTCAGGGAAAA 57.972 40.909 0.00 0.00 0.00 2.29
2887 3019 4.009675 TCGGATGATTTGTCAGGGAAAAG 58.990 43.478 0.00 0.00 0.00 2.27
2894 3026 5.660864 TGATTTGTCAGGGAAAAGAAAACCT 59.339 36.000 0.00 0.00 0.00 3.50
2911 3043 1.621672 CCTTGGGAGAGGCAGGTCTC 61.622 65.000 0.00 0.00 42.11 3.36
2916 3048 1.077357 GAGAGGCAGGTCTCGAGGA 60.077 63.158 13.56 0.00 38.71 3.71
2937 3069 5.833131 AGGAAAGTGCTTTTGTTCATTAGGA 59.167 36.000 0.00 0.00 32.11 2.94
2944 3076 4.156739 GCTTTTGTTCATTAGGAGGTGGAG 59.843 45.833 0.00 0.00 0.00 3.86
2974 3106 2.350522 GTCACTGTTGGTATGCTCCTG 58.649 52.381 0.00 0.00 0.00 3.86
2983 3115 1.215423 GGTATGCTCCTGGGGACAAAT 59.785 52.381 0.00 0.00 42.06 2.32
3007 3139 4.826248 TTTTTGCGGGGAGGGTAC 57.174 55.556 0.00 0.00 0.00 3.34
3008 3140 1.844839 TTTTTGCGGGGAGGGTACA 59.155 52.632 0.00 0.00 0.00 2.90
3009 3141 0.185416 TTTTTGCGGGGAGGGTACAA 59.815 50.000 0.00 0.00 0.00 2.41
3010 3142 0.185416 TTTTGCGGGGAGGGTACAAA 59.815 50.000 0.00 0.00 0.00 2.83
3011 3143 0.406361 TTTGCGGGGAGGGTACAAAT 59.594 50.000 0.00 0.00 0.00 2.32
3012 3144 0.034863 TTGCGGGGAGGGTACAAATC 60.035 55.000 0.00 0.00 0.00 2.17
3013 3145 1.153025 GCGGGGAGGGTACAAATCC 60.153 63.158 0.00 0.00 0.00 3.01
3014 3146 1.917336 GCGGGGAGGGTACAAATCCA 61.917 60.000 11.13 0.00 34.62 3.41
3015 3147 0.843984 CGGGGAGGGTACAAATCCAT 59.156 55.000 11.13 0.00 34.62 3.41
3016 3148 1.214424 CGGGGAGGGTACAAATCCATT 59.786 52.381 11.13 0.00 34.62 3.16
3017 3149 2.357777 CGGGGAGGGTACAAATCCATTT 60.358 50.000 11.13 0.00 34.62 2.32
3034 3166 6.587206 TCCATTTGCATGTGAAAATAGTCA 57.413 33.333 0.00 0.00 31.67 3.41
3054 3186 5.769662 AGTCACTTGTTGGCAGATAAATGAA 59.230 36.000 0.00 0.00 29.07 2.57
3060 3192 8.893727 ACTTGTTGGCAGATAAATGAATAGTAC 58.106 33.333 0.00 0.00 0.00 2.73
3061 3193 9.113838 CTTGTTGGCAGATAAATGAATAGTACT 57.886 33.333 0.00 0.00 0.00 2.73
3063 3195 9.764363 TGTTGGCAGATAAATGAATAGTACTAG 57.236 33.333 8.85 0.00 0.00 2.57
3066 3198 8.807118 TGGCAGATAAATGAATAGTACTAGAGG 58.193 37.037 8.85 0.00 0.00 3.69
3067 3199 9.026121 GGCAGATAAATGAATAGTACTAGAGGA 57.974 37.037 8.85 0.00 0.00 3.71
3073 3205 5.943706 TGAATAGTACTAGAGGATGACGC 57.056 43.478 8.85 0.00 0.00 5.19
3074 3206 4.451435 TGAATAGTACTAGAGGATGACGCG 59.549 45.833 3.53 3.53 0.00 6.01
3075 3207 0.945813 AGTACTAGAGGATGACGCGC 59.054 55.000 5.73 0.00 0.00 6.86
3077 3209 2.114331 TACTAGAGGATGACGCGCGC 62.114 60.000 32.58 23.91 0.00 6.86
3078 3210 3.187699 CTAGAGGATGACGCGCGCT 62.188 63.158 32.58 18.96 0.00 5.92
3079 3211 2.669808 CTAGAGGATGACGCGCGCTT 62.670 60.000 32.58 21.94 0.00 4.68
3080 3212 2.279502 TAGAGGATGACGCGCGCTTT 62.280 55.000 32.58 16.38 0.00 3.51
3081 3213 3.425938 GAGGATGACGCGCGCTTTG 62.426 63.158 32.58 16.59 0.00 2.77
3103 3235 2.742372 GCCGCCGTTCAGACACAT 60.742 61.111 0.00 0.00 0.00 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 2.223572 GGACAGCAAGTGTTTGGAACTG 60.224 50.000 0.00 0.00 40.56 3.16
6 7 2.024414 GGACAGCAAGTGTTTGGAACT 58.976 47.619 0.00 0.00 40.56 3.01
7 8 1.748493 TGGACAGCAAGTGTTTGGAAC 59.252 47.619 0.00 0.00 40.56 3.62
8 9 2.136298 TGGACAGCAAGTGTTTGGAA 57.864 45.000 0.00 0.00 40.56 3.53
9 10 1.748493 GTTGGACAGCAAGTGTTTGGA 59.252 47.619 0.00 0.00 40.56 3.53
10 11 1.202405 GGTTGGACAGCAAGTGTTTGG 60.202 52.381 0.00 0.00 40.56 3.28
11 12 1.750778 AGGTTGGACAGCAAGTGTTTG 59.249 47.619 0.00 0.00 40.56 2.93
12 13 1.750778 CAGGTTGGACAGCAAGTGTTT 59.249 47.619 0.00 0.00 40.56 2.83
13 14 1.340991 ACAGGTTGGACAGCAAGTGTT 60.341 47.619 0.00 0.00 40.56 3.32
14 15 0.255890 ACAGGTTGGACAGCAAGTGT 59.744 50.000 0.00 0.00 44.49 3.55
15 16 0.664761 CACAGGTTGGACAGCAAGTG 59.335 55.000 0.00 0.00 0.00 3.16
16 17 0.546122 TCACAGGTTGGACAGCAAGT 59.454 50.000 0.00 0.00 0.00 3.16
17 18 1.901591 ATCACAGGTTGGACAGCAAG 58.098 50.000 0.00 0.00 0.00 4.01
18 19 1.955778 CAATCACAGGTTGGACAGCAA 59.044 47.619 0.00 0.00 0.00 3.91
19 20 1.133823 ACAATCACAGGTTGGACAGCA 60.134 47.619 0.00 0.00 0.00 4.41
20 21 1.609208 ACAATCACAGGTTGGACAGC 58.391 50.000 0.00 0.00 0.00 4.40
21 22 2.287788 GCAACAATCACAGGTTGGACAG 60.288 50.000 6.64 0.00 43.46 3.51
22 23 1.680735 GCAACAATCACAGGTTGGACA 59.319 47.619 6.64 0.00 43.46 4.02
23 24 1.000274 GGCAACAATCACAGGTTGGAC 60.000 52.381 6.64 0.00 43.46 4.02
24 25 1.327303 GGCAACAATCACAGGTTGGA 58.673 50.000 6.64 0.00 43.46 3.53
25 26 0.039256 CGGCAACAATCACAGGTTGG 60.039 55.000 6.64 0.00 43.46 3.77
26 27 0.667993 ACGGCAACAATCACAGGTTG 59.332 50.000 0.00 0.00 45.44 3.77
27 28 1.398692 AACGGCAACAATCACAGGTT 58.601 45.000 0.00 0.00 0.00 3.50
28 29 2.264005 TAACGGCAACAATCACAGGT 57.736 45.000 0.00 0.00 0.00 4.00
29 30 2.552315 ACTTAACGGCAACAATCACAGG 59.448 45.455 0.00 0.00 0.00 4.00
30 31 3.896648 ACTTAACGGCAACAATCACAG 57.103 42.857 0.00 0.00 0.00 3.66
31 32 4.382291 AGTACTTAACGGCAACAATCACA 58.618 39.130 0.00 0.00 0.00 3.58
32 33 5.352643 AAGTACTTAACGGCAACAATCAC 57.647 39.130 6.26 0.00 0.00 3.06
33 34 6.314400 GGATAAGTACTTAACGGCAACAATCA 59.686 38.462 18.88 0.00 0.00 2.57
34 35 6.537660 AGGATAAGTACTTAACGGCAACAATC 59.462 38.462 18.88 8.87 0.00 2.67
35 36 6.315393 CAGGATAAGTACTTAACGGCAACAAT 59.685 38.462 18.88 0.00 0.00 2.71
36 37 5.640357 CAGGATAAGTACTTAACGGCAACAA 59.360 40.000 18.88 0.00 0.00 2.83
37 38 5.172934 CAGGATAAGTACTTAACGGCAACA 58.827 41.667 18.88 0.00 0.00 3.33
38 39 4.569564 CCAGGATAAGTACTTAACGGCAAC 59.430 45.833 18.88 4.12 0.00 4.17
39 40 4.467082 TCCAGGATAAGTACTTAACGGCAA 59.533 41.667 18.88 0.00 0.00 4.52
40 41 4.025360 TCCAGGATAAGTACTTAACGGCA 58.975 43.478 18.88 0.00 0.00 5.69
41 42 4.660789 TCCAGGATAAGTACTTAACGGC 57.339 45.455 18.88 8.97 0.00 5.68
42 43 5.105228 TGGTTCCAGGATAAGTACTTAACGG 60.105 44.000 18.88 15.41 0.00 4.44
43 44 5.809051 GTGGTTCCAGGATAAGTACTTAACG 59.191 44.000 18.88 7.92 0.00 3.18
44 45 6.944096 AGTGGTTCCAGGATAAGTACTTAAC 58.056 40.000 18.88 15.79 0.00 2.01
45 46 7.236019 TCAAGTGGTTCCAGGATAAGTACTTAA 59.764 37.037 18.88 0.07 0.00 1.85
46 47 6.727231 TCAAGTGGTTCCAGGATAAGTACTTA 59.273 38.462 17.41 17.41 0.00 2.24
47 48 5.546499 TCAAGTGGTTCCAGGATAAGTACTT 59.454 40.000 13.68 13.68 0.00 2.24
48 49 5.091552 TCAAGTGGTTCCAGGATAAGTACT 58.908 41.667 0.00 0.00 0.00 2.73
49 50 5.416271 TCAAGTGGTTCCAGGATAAGTAC 57.584 43.478 0.00 0.00 0.00 2.73
50 51 5.487488 ACATCAAGTGGTTCCAGGATAAGTA 59.513 40.000 0.00 0.00 0.00 2.24
51 52 4.289672 ACATCAAGTGGTTCCAGGATAAGT 59.710 41.667 0.00 0.00 0.00 2.24
52 53 4.848357 ACATCAAGTGGTTCCAGGATAAG 58.152 43.478 0.00 0.00 0.00 1.73
53 54 4.927267 ACATCAAGTGGTTCCAGGATAA 57.073 40.909 0.00 0.00 0.00 1.75
54 55 5.030147 AGTACATCAAGTGGTTCCAGGATA 58.970 41.667 0.00 0.00 0.00 2.59
55 56 3.846588 AGTACATCAAGTGGTTCCAGGAT 59.153 43.478 0.00 0.00 0.00 3.24
56 57 3.248024 AGTACATCAAGTGGTTCCAGGA 58.752 45.455 0.00 0.00 0.00 3.86
57 58 3.261897 AGAGTACATCAAGTGGTTCCAGG 59.738 47.826 0.00 0.00 0.00 4.45
58 59 4.221703 AGAGAGTACATCAAGTGGTTCCAG 59.778 45.833 0.00 0.00 0.00 3.86
59 60 4.160329 AGAGAGTACATCAAGTGGTTCCA 58.840 43.478 0.00 0.00 0.00 3.53
60 61 4.810191 AGAGAGTACATCAAGTGGTTCC 57.190 45.455 0.00 0.00 0.00 3.62
61 62 5.639931 GGAAAGAGAGTACATCAAGTGGTTC 59.360 44.000 0.00 0.00 0.00 3.62
62 63 5.308237 AGGAAAGAGAGTACATCAAGTGGTT 59.692 40.000 0.00 0.00 0.00 3.67
63 64 4.841246 AGGAAAGAGAGTACATCAAGTGGT 59.159 41.667 0.00 0.00 0.00 4.16
64 65 5.186797 AGAGGAAAGAGAGTACATCAAGTGG 59.813 44.000 0.00 0.00 0.00 4.00
65 66 6.152661 AGAGAGGAAAGAGAGTACATCAAGTG 59.847 42.308 0.00 0.00 0.00 3.16
66 67 6.252995 AGAGAGGAAAGAGAGTACATCAAGT 58.747 40.000 0.00 0.00 0.00 3.16
67 68 6.773976 AGAGAGGAAAGAGAGTACATCAAG 57.226 41.667 0.00 0.00 0.00 3.02
68 69 6.951198 AGAAGAGAGGAAAGAGAGTACATCAA 59.049 38.462 0.00 0.00 0.00 2.57
69 70 6.489603 AGAAGAGAGGAAAGAGAGTACATCA 58.510 40.000 0.00 0.00 0.00 3.07
70 71 7.404671 AAGAAGAGAGGAAAGAGAGTACATC 57.595 40.000 0.00 0.00 0.00 3.06
71 72 7.790782 AAAGAAGAGAGGAAAGAGAGTACAT 57.209 36.000 0.00 0.00 0.00 2.29
72 73 7.437748 CAAAAGAAGAGAGGAAAGAGAGTACA 58.562 38.462 0.00 0.00 0.00 2.90
73 74 6.367695 GCAAAAGAAGAGAGGAAAGAGAGTAC 59.632 42.308 0.00 0.00 0.00 2.73
74 75 6.042093 TGCAAAAGAAGAGAGGAAAGAGAGTA 59.958 38.462 0.00 0.00 0.00 2.59
75 76 5.163258 TGCAAAAGAAGAGAGGAAAGAGAGT 60.163 40.000 0.00 0.00 0.00 3.24
76 77 5.303971 TGCAAAAGAAGAGAGGAAAGAGAG 58.696 41.667 0.00 0.00 0.00 3.20
77 78 5.070981 TCTGCAAAAGAAGAGAGGAAAGAGA 59.929 40.000 0.00 0.00 29.54 3.10
78 79 5.303971 TCTGCAAAAGAAGAGAGGAAAGAG 58.696 41.667 0.00 0.00 29.54 2.85
79 80 5.163258 ACTCTGCAAAAGAAGAGAGGAAAGA 60.163 40.000 7.47 0.00 42.15 2.52
80 81 5.062528 ACTCTGCAAAAGAAGAGAGGAAAG 58.937 41.667 7.47 0.00 42.15 2.62
81 82 5.041191 ACTCTGCAAAAGAAGAGAGGAAA 57.959 39.130 7.47 0.00 42.15 3.13
82 83 4.696479 ACTCTGCAAAAGAAGAGAGGAA 57.304 40.909 7.47 0.00 42.15 3.36
83 84 4.696479 AACTCTGCAAAAGAAGAGAGGA 57.304 40.909 7.47 0.00 42.15 3.71
84 85 6.708054 TCTTTAACTCTGCAAAAGAAGAGAGG 59.292 38.462 7.47 0.00 42.15 3.69
85 86 7.095271 CCTCTTTAACTCTGCAAAAGAAGAGAG 60.095 40.741 18.18 14.85 42.15 3.20
86 87 6.708054 CCTCTTTAACTCTGCAAAAGAAGAGA 59.292 38.462 18.18 9.50 42.15 3.10
87 88 6.708054 TCCTCTTTAACTCTGCAAAAGAAGAG 59.292 38.462 10.78 12.36 44.57 2.85
88 89 6.591935 TCCTCTTTAACTCTGCAAAAGAAGA 58.408 36.000 10.78 8.06 38.42 2.87
89 90 6.567511 GCTCCTCTTTAACTCTGCAAAAGAAG 60.568 42.308 10.78 8.01 38.42 2.85
90 91 5.239525 GCTCCTCTTTAACTCTGCAAAAGAA 59.760 40.000 10.78 0.00 38.42 2.52
91 92 4.757149 GCTCCTCTTTAACTCTGCAAAAGA 59.243 41.667 9.53 9.53 37.00 2.52
92 93 4.516698 TGCTCCTCTTTAACTCTGCAAAAG 59.483 41.667 2.05 2.05 0.00 2.27
93 94 4.460263 TGCTCCTCTTTAACTCTGCAAAA 58.540 39.130 0.00 0.00 0.00 2.44
94 95 4.067896 CTGCTCCTCTTTAACTCTGCAAA 58.932 43.478 0.00 0.00 0.00 3.68
95 96 3.668447 CTGCTCCTCTTTAACTCTGCAA 58.332 45.455 0.00 0.00 0.00 4.08
96 97 2.613977 GCTGCTCCTCTTTAACTCTGCA 60.614 50.000 0.00 0.00 0.00 4.41
97 98 2.006169 GCTGCTCCTCTTTAACTCTGC 58.994 52.381 0.00 0.00 0.00 4.26
98 99 3.608316 AGCTGCTCCTCTTTAACTCTG 57.392 47.619 0.00 0.00 0.00 3.35
99 100 3.837731 AGAAGCTGCTCCTCTTTAACTCT 59.162 43.478 1.00 0.00 0.00 3.24
100 101 4.200838 AGAAGCTGCTCCTCTTTAACTC 57.799 45.455 1.00 0.00 0.00 3.01
101 102 4.632327 AAGAAGCTGCTCCTCTTTAACT 57.368 40.909 10.11 0.00 0.00 2.24
102 103 4.757149 TGAAAGAAGCTGCTCCTCTTTAAC 59.243 41.667 22.55 14.81 31.71 2.01
103 104 4.973168 TGAAAGAAGCTGCTCCTCTTTAA 58.027 39.130 22.55 16.04 31.71 1.52
104 105 4.623932 TGAAAGAAGCTGCTCCTCTTTA 57.376 40.909 22.55 12.41 31.71 1.85
105 106 3.498774 TGAAAGAAGCTGCTCCTCTTT 57.501 42.857 22.66 22.66 33.89 2.52
106 107 3.263937 AGATGAAAGAAGCTGCTCCTCTT 59.736 43.478 10.11 10.11 0.00 2.85
107 108 2.839425 AGATGAAAGAAGCTGCTCCTCT 59.161 45.455 1.00 0.00 0.00 3.69
108 109 2.937799 CAGATGAAAGAAGCTGCTCCTC 59.062 50.000 1.00 0.00 0.00 3.71
109 110 2.570752 TCAGATGAAAGAAGCTGCTCCT 59.429 45.455 1.00 0.00 0.00 3.69
110 111 2.983229 TCAGATGAAAGAAGCTGCTCC 58.017 47.619 1.00 0.00 0.00 4.70
111 112 5.368256 TTTTCAGATGAAAGAAGCTGCTC 57.632 39.130 1.00 0.00 43.90 4.26
112 113 5.779529 TTTTTCAGATGAAAGAAGCTGCT 57.220 34.783 7.95 0.00 43.90 4.24
135 136 2.140717 CGTAACCTGCTCCTCGTTTTT 58.859 47.619 0.00 0.00 0.00 1.94
136 137 1.069668 ACGTAACCTGCTCCTCGTTTT 59.930 47.619 0.00 0.00 0.00 2.43
137 138 0.677842 ACGTAACCTGCTCCTCGTTT 59.322 50.000 0.00 0.00 0.00 3.60
138 139 0.677842 AACGTAACCTGCTCCTCGTT 59.322 50.000 0.00 0.00 36.84 3.85
139 140 0.243095 GAACGTAACCTGCTCCTCGT 59.757 55.000 0.00 0.00 0.00 4.18
140 141 0.242825 TGAACGTAACCTGCTCCTCG 59.757 55.000 0.00 0.00 0.00 4.63
141 142 1.000506 TGTGAACGTAACCTGCTCCTC 59.999 52.381 0.00 0.00 0.00 3.71
142 143 1.045407 TGTGAACGTAACCTGCTCCT 58.955 50.000 0.00 0.00 0.00 3.69
143 144 2.094762 ATGTGAACGTAACCTGCTCC 57.905 50.000 0.00 0.00 0.00 4.70
144 145 4.435651 GCTTAATGTGAACGTAACCTGCTC 60.436 45.833 0.00 0.00 0.00 4.26
145 146 3.435671 GCTTAATGTGAACGTAACCTGCT 59.564 43.478 0.00 0.00 0.00 4.24
146 147 3.187637 TGCTTAATGTGAACGTAACCTGC 59.812 43.478 0.00 0.00 0.00 4.85
147 148 5.351465 AGATGCTTAATGTGAACGTAACCTG 59.649 40.000 0.00 0.00 0.00 4.00
148 149 5.488341 AGATGCTTAATGTGAACGTAACCT 58.512 37.500 0.00 0.00 0.00 3.50
149 150 5.796350 AGATGCTTAATGTGAACGTAACC 57.204 39.130 0.00 0.00 0.00 2.85
150 151 6.248631 GGAAGATGCTTAATGTGAACGTAAC 58.751 40.000 0.00 0.00 0.00 2.50
151 152 5.353123 GGGAAGATGCTTAATGTGAACGTAA 59.647 40.000 0.00 0.00 0.00 3.18
152 153 4.873827 GGGAAGATGCTTAATGTGAACGTA 59.126 41.667 0.00 0.00 0.00 3.57
153 154 3.689649 GGGAAGATGCTTAATGTGAACGT 59.310 43.478 0.00 0.00 0.00 3.99
154 155 3.689161 TGGGAAGATGCTTAATGTGAACG 59.311 43.478 0.00 0.00 0.00 3.95
155 156 5.841957 ATGGGAAGATGCTTAATGTGAAC 57.158 39.130 0.00 0.00 0.00 3.18
156 157 9.288576 CTAATATGGGAAGATGCTTAATGTGAA 57.711 33.333 0.00 0.00 0.00 3.18
157 158 7.391554 GCTAATATGGGAAGATGCTTAATGTGA 59.608 37.037 0.00 0.00 0.00 3.58
158 159 7.175467 TGCTAATATGGGAAGATGCTTAATGTG 59.825 37.037 0.00 0.00 0.00 3.21
159 160 7.175641 GTGCTAATATGGGAAGATGCTTAATGT 59.824 37.037 0.00 0.00 0.00 2.71
160 161 7.175467 TGTGCTAATATGGGAAGATGCTTAATG 59.825 37.037 0.00 0.00 0.00 1.90
161 162 7.233632 TGTGCTAATATGGGAAGATGCTTAAT 58.766 34.615 0.00 0.00 0.00 1.40
162 163 6.600388 TGTGCTAATATGGGAAGATGCTTAA 58.400 36.000 0.00 0.00 0.00 1.85
163 164 6.186420 TGTGCTAATATGGGAAGATGCTTA 57.814 37.500 0.00 0.00 0.00 3.09
164 165 5.052693 TGTGCTAATATGGGAAGATGCTT 57.947 39.130 0.00 0.00 0.00 3.91
165 166 4.712051 TGTGCTAATATGGGAAGATGCT 57.288 40.909 0.00 0.00 0.00 3.79
166 167 5.772825 TTTGTGCTAATATGGGAAGATGC 57.227 39.130 0.00 0.00 0.00 3.91
178 179 9.686683 AGTGGACTCTTTATAATTTGTGCTAAT 57.313 29.630 0.00 0.00 0.00 1.73
181 182 9.686683 ATTAGTGGACTCTTTATAATTTGTGCT 57.313 29.630 0.00 0.00 0.00 4.40
192 193 9.865321 GTGTACATTGTATTAGTGGACTCTTTA 57.135 33.333 0.00 0.00 31.43 1.85
193 194 8.372459 TGTGTACATTGTATTAGTGGACTCTTT 58.628 33.333 0.00 0.00 31.43 2.52
194 195 7.817962 GTGTGTACATTGTATTAGTGGACTCTT 59.182 37.037 0.00 0.00 31.43 2.85
195 196 7.178628 AGTGTGTACATTGTATTAGTGGACTCT 59.821 37.037 0.00 0.00 31.43 3.24
196 197 7.321153 AGTGTGTACATTGTATTAGTGGACTC 58.679 38.462 0.00 0.00 31.43 3.36
197 198 7.241042 AGTGTGTACATTGTATTAGTGGACT 57.759 36.000 0.00 0.00 31.43 3.85
198 199 7.064253 GGAAGTGTGTACATTGTATTAGTGGAC 59.936 40.741 0.00 0.00 30.81 4.02
199 200 7.101054 GGAAGTGTGTACATTGTATTAGTGGA 58.899 38.462 0.00 0.00 0.00 4.02
200 201 6.876789 TGGAAGTGTGTACATTGTATTAGTGG 59.123 38.462 0.00 0.00 0.00 4.00
201 202 7.899178 TGGAAGTGTGTACATTGTATTAGTG 57.101 36.000 0.00 0.00 0.00 2.74
231 232 6.183360 GGATTTGGCAATGAAGTTTGGTTTTT 60.183 34.615 0.00 0.00 0.00 1.94
232 233 5.299028 GGATTTGGCAATGAAGTTTGGTTTT 59.701 36.000 0.00 0.00 0.00 2.43
233 234 4.821260 GGATTTGGCAATGAAGTTTGGTTT 59.179 37.500 0.00 0.00 0.00 3.27
234 235 4.388485 GGATTTGGCAATGAAGTTTGGTT 58.612 39.130 0.00 0.00 0.00 3.67
235 236 3.244526 GGGATTTGGCAATGAAGTTTGGT 60.245 43.478 0.00 0.00 0.00 3.67
236 237 3.244491 TGGGATTTGGCAATGAAGTTTGG 60.244 43.478 0.00 0.00 0.00 3.28
237 238 3.998341 CTGGGATTTGGCAATGAAGTTTG 59.002 43.478 0.00 0.00 0.00 2.93
238 239 3.903090 TCTGGGATTTGGCAATGAAGTTT 59.097 39.130 0.00 0.00 0.00 2.66
239 240 3.509442 TCTGGGATTTGGCAATGAAGTT 58.491 40.909 0.00 0.00 0.00 2.66
240 241 3.173953 TCTGGGATTTGGCAATGAAGT 57.826 42.857 0.00 0.00 0.00 3.01
241 242 4.748277 AATCTGGGATTTGGCAATGAAG 57.252 40.909 0.00 0.00 0.00 3.02
242 243 5.502089 AAAATCTGGGATTTGGCAATGAA 57.498 34.783 0.00 0.00 0.00 2.57
243 244 6.811634 ATAAAATCTGGGATTTGGCAATGA 57.188 33.333 0.00 0.00 0.00 2.57
244 245 8.423349 TCTTATAAAATCTGGGATTTGGCAATG 58.577 33.333 0.00 0.00 0.00 2.82
245 246 8.551682 TCTTATAAAATCTGGGATTTGGCAAT 57.448 30.769 0.00 0.00 0.00 3.56
246 247 7.838696 TCTCTTATAAAATCTGGGATTTGGCAA 59.161 33.333 0.00 0.00 0.00 4.52
247 248 7.353525 TCTCTTATAAAATCTGGGATTTGGCA 58.646 34.615 6.31 0.00 0.00 4.92
248 249 7.522889 GCTCTCTTATAAAATCTGGGATTTGGC 60.523 40.741 6.31 0.00 0.00 4.52
249 250 7.503566 TGCTCTCTTATAAAATCTGGGATTTGG 59.496 37.037 6.31 0.00 0.00 3.28
250 251 8.455903 TGCTCTCTTATAAAATCTGGGATTTG 57.544 34.615 6.31 0.00 0.00 2.32
252 253 9.956640 CTATGCTCTCTTATAAAATCTGGGATT 57.043 33.333 0.00 0.00 0.00 3.01
253 254 9.110382 ACTATGCTCTCTTATAAAATCTGGGAT 57.890 33.333 0.00 0.00 0.00 3.85
254 255 8.370940 CACTATGCTCTCTTATAAAATCTGGGA 58.629 37.037 0.00 0.00 0.00 4.37
255 256 7.118971 GCACTATGCTCTCTTATAAAATCTGGG 59.881 40.741 0.00 0.00 40.96 4.45
256 257 7.658982 TGCACTATGCTCTCTTATAAAATCTGG 59.341 37.037 2.02 0.00 45.31 3.86
257 258 8.599055 TGCACTATGCTCTCTTATAAAATCTG 57.401 34.615 2.02 0.00 45.31 2.90
258 259 9.217278 CATGCACTATGCTCTCTTATAAAATCT 57.783 33.333 2.02 0.00 45.31 2.40
275 276 4.132336 CCAGACAACATAGCATGCACTAT 58.868 43.478 21.98 7.07 32.99 2.12
276 277 3.055167 ACCAGACAACATAGCATGCACTA 60.055 43.478 21.98 4.59 0.00 2.74
277 278 2.290514 ACCAGACAACATAGCATGCACT 60.291 45.455 21.98 1.90 0.00 4.40
278 279 2.086869 ACCAGACAACATAGCATGCAC 58.913 47.619 21.98 0.67 0.00 4.57
279 280 2.358957 GACCAGACAACATAGCATGCA 58.641 47.619 21.98 6.36 0.00 3.96
280 281 1.328680 CGACCAGACAACATAGCATGC 59.671 52.381 10.51 10.51 0.00 4.06
281 282 1.328680 GCGACCAGACAACATAGCATG 59.671 52.381 0.00 0.00 0.00 4.06
282 283 1.066215 TGCGACCAGACAACATAGCAT 60.066 47.619 0.00 0.00 0.00 3.79
283 284 0.320050 TGCGACCAGACAACATAGCA 59.680 50.000 0.00 0.00 0.00 3.49
284 285 1.656652 ATGCGACCAGACAACATAGC 58.343 50.000 0.00 0.00 0.00 2.97
285 286 2.789339 CGTATGCGACCAGACAACATAG 59.211 50.000 0.00 0.00 41.33 2.23
286 287 2.804647 CGTATGCGACCAGACAACATA 58.195 47.619 0.00 0.00 41.33 2.29
287 288 1.640428 CGTATGCGACCAGACAACAT 58.360 50.000 0.00 0.00 41.33 2.71
288 289 1.011968 GCGTATGCGACCAGACAACA 61.012 55.000 7.60 0.00 41.33 3.33
289 290 1.708027 GCGTATGCGACCAGACAAC 59.292 57.895 7.60 0.00 41.33 3.32
290 291 4.178861 GCGTATGCGACCAGACAA 57.821 55.556 7.60 0.00 41.33 3.18
297 298 6.812093 CGTTATTTGACGAGCGTATGCGAC 62.812 50.000 7.60 0.00 45.47 5.19
298 299 4.856284 CGTTATTTGACGAGCGTATGCGA 61.856 47.826 7.60 0.00 45.47 5.10
299 300 2.652960 CGTTATTTGACGAGCGTATGCG 60.653 50.000 0.00 0.00 45.47 4.73
300 301 2.347292 CCGTTATTTGACGAGCGTATGC 60.347 50.000 0.00 0.00 45.47 3.14
301 302 2.217847 CCCGTTATTTGACGAGCGTATG 59.782 50.000 0.00 0.00 45.47 2.39
302 303 2.159198 ACCCGTTATTTGACGAGCGTAT 60.159 45.455 0.00 0.00 45.47 3.06
303 304 1.202114 ACCCGTTATTTGACGAGCGTA 59.798 47.619 0.00 0.00 45.47 4.42
304 305 0.037975 ACCCGTTATTTGACGAGCGT 60.038 50.000 0.00 0.00 45.47 5.07
305 306 0.368907 CACCCGTTATTTGACGAGCG 59.631 55.000 0.00 0.00 45.47 5.03
306 307 0.096454 GCACCCGTTATTTGACGAGC 59.904 55.000 0.00 0.00 45.47 5.03
307 308 0.725117 GGCACCCGTTATTTGACGAG 59.275 55.000 0.00 0.00 45.47 4.18
308 309 0.322322 AGGCACCCGTTATTTGACGA 59.678 50.000 0.00 0.00 45.47 4.20
309 310 1.161843 AAGGCACCCGTTATTTGACG 58.838 50.000 0.00 0.00 42.43 4.35
310 311 3.502979 TGTAAAGGCACCCGTTATTTGAC 59.497 43.478 0.00 0.00 31.02 3.18
311 312 3.502979 GTGTAAAGGCACCCGTTATTTGA 59.497 43.478 0.00 0.00 31.02 2.69
312 313 3.253677 TGTGTAAAGGCACCCGTTATTTG 59.746 43.478 0.00 0.00 38.52 2.32
313 314 3.488363 TGTGTAAAGGCACCCGTTATTT 58.512 40.909 0.00 0.00 38.52 1.40
314 315 3.143211 TGTGTAAAGGCACCCGTTATT 57.857 42.857 0.00 0.00 38.52 1.40
315 316 2.863132 TGTGTAAAGGCACCCGTTAT 57.137 45.000 0.00 0.00 38.52 1.89
316 317 2.634815 TTGTGTAAAGGCACCCGTTA 57.365 45.000 0.00 0.00 38.52 3.18
317 318 1.765230 TTTGTGTAAAGGCACCCGTT 58.235 45.000 0.00 0.00 38.52 4.44
318 319 1.989706 ATTTGTGTAAAGGCACCCGT 58.010 45.000 0.00 0.00 38.52 5.28
319 320 3.056304 CAAATTTGTGTAAAGGCACCCG 58.944 45.455 10.15 0.00 38.52 5.28
320 321 3.181459 ACCAAATTTGTGTAAAGGCACCC 60.181 43.478 16.73 0.00 38.52 4.61
321 322 3.807071 CACCAAATTTGTGTAAAGGCACC 59.193 43.478 16.73 0.00 38.52 5.01
322 323 4.438148 ACACCAAATTTGTGTAAAGGCAC 58.562 39.130 16.73 0.00 39.65 5.01
323 324 4.744795 ACACCAAATTTGTGTAAAGGCA 57.255 36.364 16.73 0.00 0.00 4.75
324 325 6.429791 AAAACACCAAATTTGTGTAAAGGC 57.570 33.333 19.70 0.00 0.00 4.35
325 326 8.262715 AGAAAAACACCAAATTTGTGTAAAGG 57.737 30.769 19.70 6.82 0.00 3.11
330 331 9.495572 TTCTAAAGAAAAACACCAAATTTGTGT 57.504 25.926 16.73 16.29 0.00 3.72
331 332 9.971744 CTTCTAAAGAAAAACACCAAATTTGTG 57.028 29.630 16.73 15.73 33.07 3.33
332 333 9.719355 ACTTCTAAAGAAAAACACCAAATTTGT 57.281 25.926 16.73 2.76 33.07 2.83
340 341 9.181805 GCTTGAATACTTCTAAAGAAAAACACC 57.818 33.333 0.00 0.00 33.07 4.16
341 342 9.181805 GGCTTGAATACTTCTAAAGAAAAACAC 57.818 33.333 0.00 0.00 33.07 3.32
342 343 8.073768 CGGCTTGAATACTTCTAAAGAAAAACA 58.926 33.333 0.00 0.00 33.07 2.83
343 344 8.287503 TCGGCTTGAATACTTCTAAAGAAAAAC 58.712 33.333 0.00 0.00 33.07 2.43
344 345 8.385898 TCGGCTTGAATACTTCTAAAGAAAAA 57.614 30.769 0.00 0.00 33.07 1.94
345 346 7.660208 ACTCGGCTTGAATACTTCTAAAGAAAA 59.340 33.333 0.00 0.00 33.07 2.29
346 347 7.159372 ACTCGGCTTGAATACTTCTAAAGAAA 58.841 34.615 0.00 0.00 33.07 2.52
347 348 6.698380 ACTCGGCTTGAATACTTCTAAAGAA 58.302 36.000 0.00 0.00 0.00 2.52
348 349 6.282199 ACTCGGCTTGAATACTTCTAAAGA 57.718 37.500 0.00 0.00 0.00 2.52
349 350 6.969828 AACTCGGCTTGAATACTTCTAAAG 57.030 37.500 0.00 0.00 0.00 1.85
350 351 6.148811 CCAAACTCGGCTTGAATACTTCTAAA 59.851 38.462 0.00 0.00 0.00 1.85
351 352 5.642063 CCAAACTCGGCTTGAATACTTCTAA 59.358 40.000 0.00 0.00 0.00 2.10
352 353 5.046878 TCCAAACTCGGCTTGAATACTTCTA 60.047 40.000 0.00 0.00 0.00 2.10
353 354 4.003648 CCAAACTCGGCTTGAATACTTCT 58.996 43.478 0.00 0.00 0.00 2.85
354 355 4.000988 TCCAAACTCGGCTTGAATACTTC 58.999 43.478 0.00 0.00 0.00 3.01
355 356 4.015872 TCCAAACTCGGCTTGAATACTT 57.984 40.909 0.00 0.00 0.00 2.24
356 357 3.695830 TCCAAACTCGGCTTGAATACT 57.304 42.857 0.00 0.00 0.00 2.12
357 358 4.965119 AATCCAAACTCGGCTTGAATAC 57.035 40.909 0.00 0.00 0.00 1.89
358 359 5.391523 CGAAAATCCAAACTCGGCTTGAATA 60.392 40.000 0.00 0.00 0.00 1.75
359 360 4.615912 CGAAAATCCAAACTCGGCTTGAAT 60.616 41.667 0.00 0.00 0.00 2.57
360 361 3.304391 CGAAAATCCAAACTCGGCTTGAA 60.304 43.478 0.00 0.00 0.00 2.69
361 362 2.225491 CGAAAATCCAAACTCGGCTTGA 59.775 45.455 0.00 0.00 0.00 3.02
362 363 2.584791 CGAAAATCCAAACTCGGCTTG 58.415 47.619 0.00 0.00 0.00 4.01
363 364 1.068541 GCGAAAATCCAAACTCGGCTT 60.069 47.619 0.00 0.00 0.00 4.35
364 365 0.521735 GCGAAAATCCAAACTCGGCT 59.478 50.000 0.00 0.00 0.00 5.52
365 366 3.015799 GCGAAAATCCAAACTCGGC 57.984 52.632 0.00 0.00 0.00 5.54
366 367 1.165270 AGGCGAAAATCCAAACTCGG 58.835 50.000 0.00 0.00 0.00 4.63
367 368 4.616181 ATTAGGCGAAAATCCAAACTCG 57.384 40.909 0.00 0.00 0.00 4.18
368 369 7.309920 TGTTTATTAGGCGAAAATCCAAACTC 58.690 34.615 0.00 0.00 0.00 3.01
369 370 7.222000 TGTTTATTAGGCGAAAATCCAAACT 57.778 32.000 0.00 0.00 0.00 2.66
370 371 9.233232 CTATGTTTATTAGGCGAAAATCCAAAC 57.767 33.333 0.00 0.00 0.00 2.93
371 372 8.962679 ACTATGTTTATTAGGCGAAAATCCAAA 58.037 29.630 0.00 0.00 0.00 3.28
372 373 8.514330 ACTATGTTTATTAGGCGAAAATCCAA 57.486 30.769 0.00 0.00 0.00 3.53
373 374 8.402472 CAACTATGTTTATTAGGCGAAAATCCA 58.598 33.333 0.00 0.00 0.00 3.41
374 375 8.617809 TCAACTATGTTTATTAGGCGAAAATCC 58.382 33.333 0.00 0.00 0.00 3.01
375 376 9.997482 TTCAACTATGTTTATTAGGCGAAAATC 57.003 29.630 0.00 0.00 0.00 2.17
559 560 2.159296 GCATTTAGGCCCTAAAACACCG 60.159 50.000 19.37 7.59 39.03 4.94
562 563 2.495669 GCAGCATTTAGGCCCTAAAACA 59.504 45.455 19.37 0.00 39.03 2.83
568 569 1.076485 CCAGCAGCATTTAGGCCCT 60.076 57.895 0.00 0.00 0.00 5.19
598 613 2.185350 CGCTAGACAGTGGGCTGG 59.815 66.667 0.00 0.00 46.62 4.85
619 634 1.678970 GGAATGGCTTCAAGCGGGT 60.679 57.895 2.54 0.00 43.62 5.28
731 778 1.428912 TGGGAAAAAGGATCTGCCAGT 59.571 47.619 0.00 0.00 40.02 4.00
742 789 3.365364 GCACGAGATGAAGTGGGAAAAAG 60.365 47.826 0.00 0.00 38.68 2.27
743 790 2.552315 GCACGAGATGAAGTGGGAAAAA 59.448 45.455 0.00 0.00 38.68 1.94
744 791 2.151202 GCACGAGATGAAGTGGGAAAA 58.849 47.619 0.00 0.00 38.68 2.29
745 792 1.808411 GCACGAGATGAAGTGGGAAA 58.192 50.000 0.00 0.00 38.68 3.13
783 830 1.202417 GCGGCAGCTAGTCAAGATACA 60.202 52.381 0.00 0.00 41.01 2.29
888 940 3.065925 GTGGATTATGCCTGCTTCACTTC 59.934 47.826 0.00 0.00 0.00 3.01
919 971 2.936993 GCGGGAAGAAGATGAAGCAAGA 60.937 50.000 0.00 0.00 0.00 3.02
923 975 1.601430 GATGCGGGAAGAAGATGAAGC 59.399 52.381 0.00 0.00 0.00 3.86
1137 1192 4.316823 TCGAGGGTCTGGGGCAGT 62.317 66.667 0.00 0.00 32.61 4.40
1187 1242 1.337118 GGTGAAAATGGGAGTTGGCA 58.663 50.000 0.00 0.00 0.00 4.92
1192 1247 2.227194 GACGTTGGTGAAAATGGGAGT 58.773 47.619 0.00 0.00 0.00 3.85
1299 1354 2.757508 CAGCGGCAGAGGAGGAGA 60.758 66.667 1.45 0.00 0.00 3.71
1367 1422 4.717313 GCAACCGGACCCACTCCC 62.717 72.222 9.46 0.00 35.21 4.30
1392 1447 4.321966 TCGGTGCCGGCATTGACA 62.322 61.111 35.23 12.51 40.25 3.58
1557 1612 3.642705 TGCTTCATCATCTTCCGTATCG 58.357 45.455 0.00 0.00 0.00 2.92
1675 1733 2.721906 TCTTCCTCCATGTTTTCCCCTT 59.278 45.455 0.00 0.00 0.00 3.95
1702 1760 0.109342 ACAGTGCCAAGTTCAGGGAG 59.891 55.000 0.00 0.00 0.00 4.30
2090 2148 5.071653 AGGCACCAACCTCAATTTTTATGTT 59.928 36.000 0.00 0.00 33.62 2.71
2188 2249 5.830000 ACTACAAACAGAAAACAGGAACC 57.170 39.130 0.00 0.00 0.00 3.62
2195 2256 6.598753 TGAGCACTACTACAAACAGAAAAC 57.401 37.500 0.00 0.00 0.00 2.43
2292 2367 2.622064 ACAAGAAGGGTCACACTCAC 57.378 50.000 0.00 0.00 0.00 3.51
2297 2372 4.410883 TCCTTAGAAACAAGAAGGGTCACA 59.589 41.667 0.00 0.00 40.23 3.58
2301 2376 9.059023 ACTATTATCCTTAGAAACAAGAAGGGT 57.941 33.333 0.00 0.00 40.23 4.34
2334 2409 9.041354 AGTAATAATGGACCCAATTTTGCTTAA 57.959 29.630 0.00 0.00 0.00 1.85
2471 2546 9.974980 GAAGTTATTTTGTATCCTTCCAAACAA 57.025 29.630 0.00 0.00 30.74 2.83
2551 2645 4.041321 TCAGCCAAGATATATGCAAGAGCT 59.959 41.667 0.00 0.00 42.74 4.09
2552 2646 4.321718 TCAGCCAAGATATATGCAAGAGC 58.678 43.478 0.00 0.00 42.57 4.09
2562 2685 3.307059 GGAATACGCCTCAGCCAAGATAT 60.307 47.826 0.00 0.00 34.57 1.63
2592 2715 0.944311 AGCAACACAACTAGCGGTCG 60.944 55.000 0.00 0.00 0.00 4.79
2597 2720 0.519077 GCCTCAGCAACACAACTAGC 59.481 55.000 0.00 0.00 39.53 3.42
2598 2721 1.802960 CAGCCTCAGCAACACAACTAG 59.197 52.381 0.00 0.00 43.56 2.57
2658 2785 7.328493 GGAAAGGTAAATGAAATGAAGAAACGG 59.672 37.037 0.00 0.00 0.00 4.44
2751 2883 3.009143 AGGTCCCAGGTGATTTACTGAAC 59.991 47.826 0.00 0.00 36.86 3.18
2797 2929 4.463539 CCATTCCAGTGAATTCCAACATGA 59.536 41.667 0.00 0.00 39.20 3.07
2800 2932 2.562298 GCCATTCCAGTGAATTCCAACA 59.438 45.455 2.27 0.00 39.20 3.33
2843 2975 2.936202 TGCAGAACTCAGGCTCTTTTT 58.064 42.857 0.00 0.00 0.00 1.94
2844 2976 2.645838 TGCAGAACTCAGGCTCTTTT 57.354 45.000 0.00 0.00 0.00 2.27
2845 2977 2.645838 TTGCAGAACTCAGGCTCTTT 57.354 45.000 0.00 0.00 0.00 2.52
2846 2978 2.709213 GATTGCAGAACTCAGGCTCTT 58.291 47.619 0.00 0.00 0.00 2.85
2847 2979 1.405256 CGATTGCAGAACTCAGGCTCT 60.405 52.381 0.00 0.00 0.00 4.09
2848 2980 1.005340 CGATTGCAGAACTCAGGCTC 58.995 55.000 0.00 0.00 0.00 4.70
2849 2981 0.392193 CCGATTGCAGAACTCAGGCT 60.392 55.000 0.00 0.00 0.00 4.58
2850 2982 0.391661 TCCGATTGCAGAACTCAGGC 60.392 55.000 0.00 0.00 0.00 4.85
2851 2983 1.938577 CATCCGATTGCAGAACTCAGG 59.061 52.381 0.00 0.00 0.00 3.86
2852 2984 2.897436 TCATCCGATTGCAGAACTCAG 58.103 47.619 0.00 0.00 0.00 3.35
2853 2985 3.548745 ATCATCCGATTGCAGAACTCA 57.451 42.857 0.00 0.00 0.00 3.41
2854 2986 4.095483 ACAAATCATCCGATTGCAGAACTC 59.905 41.667 0.00 0.00 41.12 3.01
2855 2987 4.012374 ACAAATCATCCGATTGCAGAACT 58.988 39.130 0.00 0.00 41.12 3.01
2856 2988 4.142622 TGACAAATCATCCGATTGCAGAAC 60.143 41.667 0.00 0.00 41.12 3.01
2857 2989 4.009002 TGACAAATCATCCGATTGCAGAA 58.991 39.130 0.00 0.00 41.12 3.02
2858 2990 3.608796 TGACAAATCATCCGATTGCAGA 58.391 40.909 0.00 0.00 41.12 4.26
2859 2991 3.242969 CCTGACAAATCATCCGATTGCAG 60.243 47.826 0.00 0.00 41.12 4.41
2860 2992 2.684374 CCTGACAAATCATCCGATTGCA 59.316 45.455 0.00 0.00 41.12 4.08
2861 2993 2.033801 CCCTGACAAATCATCCGATTGC 59.966 50.000 0.00 0.00 41.12 3.56
2862 2994 3.544684 TCCCTGACAAATCATCCGATTG 58.455 45.455 0.00 0.00 41.12 2.67
2863 2995 3.931907 TCCCTGACAAATCATCCGATT 57.068 42.857 0.00 0.00 43.94 3.34
2864 2996 3.931907 TTCCCTGACAAATCATCCGAT 57.068 42.857 0.00 0.00 33.22 4.18
2865 2997 3.712016 TTTCCCTGACAAATCATCCGA 57.288 42.857 0.00 0.00 33.22 4.55
2866 2998 4.009675 TCTTTTCCCTGACAAATCATCCG 58.990 43.478 0.00 0.00 33.22 4.18
2867 2999 5.982890 TTCTTTTCCCTGACAAATCATCC 57.017 39.130 0.00 0.00 33.22 3.51
2868 3000 6.646653 GGTTTTCTTTTCCCTGACAAATCATC 59.353 38.462 0.00 0.00 33.22 2.92
2869 3001 6.327365 AGGTTTTCTTTTCCCTGACAAATCAT 59.673 34.615 0.00 0.00 33.22 2.45
2870 3002 5.660864 AGGTTTTCTTTTCCCTGACAAATCA 59.339 36.000 0.00 0.00 0.00 2.57
2871 3003 6.161855 AGGTTTTCTTTTCCCTGACAAATC 57.838 37.500 0.00 0.00 0.00 2.17
2872 3004 6.348498 CAAGGTTTTCTTTTCCCTGACAAAT 58.652 36.000 0.00 0.00 32.41 2.32
2873 3005 5.337975 CCAAGGTTTTCTTTTCCCTGACAAA 60.338 40.000 0.00 0.00 32.41 2.83
2874 3006 4.161377 CCAAGGTTTTCTTTTCCCTGACAA 59.839 41.667 0.00 0.00 32.41 3.18
2875 3007 3.704061 CCAAGGTTTTCTTTTCCCTGACA 59.296 43.478 0.00 0.00 32.41 3.58
2876 3008 3.069586 CCCAAGGTTTTCTTTTCCCTGAC 59.930 47.826 0.00 0.00 32.41 3.51
2877 3009 3.052490 TCCCAAGGTTTTCTTTTCCCTGA 60.052 43.478 0.00 0.00 32.41 3.86
2878 3010 3.304829 TCCCAAGGTTTTCTTTTCCCTG 58.695 45.455 0.00 0.00 32.41 4.45
2879 3011 3.206639 TCTCCCAAGGTTTTCTTTTCCCT 59.793 43.478 0.00 0.00 32.41 4.20
2880 3012 3.572642 TCTCCCAAGGTTTTCTTTTCCC 58.427 45.455 0.00 0.00 32.41 3.97
2881 3013 3.574396 CCTCTCCCAAGGTTTTCTTTTCC 59.426 47.826 0.00 0.00 32.41 3.13
2882 3014 3.005897 GCCTCTCCCAAGGTTTTCTTTTC 59.994 47.826 0.00 0.00 38.79 2.29
2883 3015 2.965831 GCCTCTCCCAAGGTTTTCTTTT 59.034 45.455 0.00 0.00 38.79 2.27
2884 3016 2.091333 TGCCTCTCCCAAGGTTTTCTTT 60.091 45.455 0.00 0.00 38.79 2.52
2885 3017 1.499007 TGCCTCTCCCAAGGTTTTCTT 59.501 47.619 0.00 0.00 38.79 2.52
2886 3018 1.074566 CTGCCTCTCCCAAGGTTTTCT 59.925 52.381 0.00 0.00 38.79 2.52
2887 3019 1.539157 CTGCCTCTCCCAAGGTTTTC 58.461 55.000 0.00 0.00 38.79 2.29
2894 3026 1.984570 CGAGACCTGCCTCTCCCAA 60.985 63.158 0.00 0.00 34.23 4.12
2911 3043 3.691049 TGAACAAAAGCACTTTCCTCG 57.309 42.857 0.00 0.00 31.45 4.63
2916 3048 5.598417 ACCTCCTAATGAACAAAAGCACTTT 59.402 36.000 0.00 0.00 0.00 2.66
2944 3076 4.626081 ACAGTGACCACGCAGGCC 62.626 66.667 0.00 0.00 43.14 5.19
2956 3088 1.679944 CCCAGGAGCATACCAACAGTG 60.680 57.143 0.00 0.00 0.00 3.66
2990 3122 0.185416 TTGTACCCTCCCCGCAAAAA 59.815 50.000 0.00 0.00 0.00 1.94
2991 3123 0.185416 TTTGTACCCTCCCCGCAAAA 59.815 50.000 0.00 0.00 0.00 2.44
2992 3124 0.406361 ATTTGTACCCTCCCCGCAAA 59.594 50.000 0.00 0.00 34.25 3.68
2993 3125 0.034863 GATTTGTACCCTCCCCGCAA 60.035 55.000 0.00 0.00 0.00 4.85
2994 3126 1.605453 GATTTGTACCCTCCCCGCA 59.395 57.895 0.00 0.00 0.00 5.69
2995 3127 1.153025 GGATTTGTACCCTCCCCGC 60.153 63.158 0.00 0.00 0.00 6.13
2996 3128 0.843984 ATGGATTTGTACCCTCCCCG 59.156 55.000 0.00 0.00 0.00 5.73
2997 3129 3.031013 CAAATGGATTTGTACCCTCCCC 58.969 50.000 4.24 0.00 41.58 4.81
2998 3130 2.430694 GCAAATGGATTTGTACCCTCCC 59.569 50.000 12.51 0.00 46.63 4.30
2999 3131 3.096092 TGCAAATGGATTTGTACCCTCC 58.904 45.455 12.51 0.00 46.63 4.30
3000 3132 4.160252 ACATGCAAATGGATTTGTACCCTC 59.840 41.667 12.51 0.00 46.63 4.30
3001 3133 4.081531 CACATGCAAATGGATTTGTACCCT 60.082 41.667 12.51 0.00 46.63 4.34
3002 3134 4.081752 TCACATGCAAATGGATTTGTACCC 60.082 41.667 12.51 0.00 46.63 3.69
3003 3135 5.070770 TCACATGCAAATGGATTTGTACC 57.929 39.130 12.51 0.00 46.63 3.34
3004 3136 7.418840 TTTTCACATGCAAATGGATTTGTAC 57.581 32.000 12.51 0.00 46.63 2.90
3005 3137 9.368674 CTATTTTCACATGCAAATGGATTTGTA 57.631 29.630 12.51 9.16 46.63 2.41
3006 3138 7.879160 ACTATTTTCACATGCAAATGGATTTGT 59.121 29.630 12.51 0.00 46.63 2.83
3008 3140 8.095792 TGACTATTTTCACATGCAAATGGATTT 58.904 29.630 12.90 0.00 0.00 2.17
3009 3141 7.546667 GTGACTATTTTCACATGCAAATGGATT 59.453 33.333 12.90 0.00 44.62 3.01
3010 3142 7.037438 GTGACTATTTTCACATGCAAATGGAT 58.963 34.615 12.90 0.00 44.62 3.41
3011 3143 6.389091 GTGACTATTTTCACATGCAAATGGA 58.611 36.000 12.90 0.00 44.62 3.41
3012 3144 6.636666 GTGACTATTTTCACATGCAAATGG 57.363 37.500 0.00 0.22 44.62 3.16
3013 3145 7.383029 ACAAGTGACTATTTTCACATGCAAATG 59.617 33.333 8.07 0.00 45.10 2.32
3014 3146 7.436118 ACAAGTGACTATTTTCACATGCAAAT 58.564 30.769 8.07 0.00 45.10 2.32
3015 3147 6.804677 ACAAGTGACTATTTTCACATGCAAA 58.195 32.000 8.07 0.00 45.10 3.68
3016 3148 6.389830 ACAAGTGACTATTTTCACATGCAA 57.610 33.333 8.07 0.00 45.10 4.08
3017 3149 6.207928 CAACAAGTGACTATTTTCACATGCA 58.792 36.000 8.07 0.00 45.10 3.96
3034 3166 7.944729 ACTATTCATTTATCTGCCAACAAGT 57.055 32.000 0.00 0.00 0.00 3.16
3054 3186 2.743126 GCGCGTCATCCTCTAGTACTAT 59.257 50.000 8.43 0.00 0.00 2.12
3060 3192 2.669808 AAGCGCGCGTCATCCTCTAG 62.670 60.000 32.35 0.00 0.00 2.43
3061 3193 2.279502 AAAGCGCGCGTCATCCTCTA 62.280 55.000 32.35 0.00 0.00 2.43
3062 3194 3.649277 AAAGCGCGCGTCATCCTCT 62.649 57.895 32.35 15.06 0.00 3.69
3063 3195 3.188786 AAAGCGCGCGTCATCCTC 61.189 61.111 32.35 12.72 0.00 3.71
3086 3218 2.742372 ATGTGTCTGAACGGCGGC 60.742 61.111 13.24 0.00 0.00 6.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.