Multiple sequence alignment - TraesCS1B01G389900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G389900 chr1B 100.000 2804 0 0 1 2804 623690445 623687642 0.000000e+00 5179.0
1 TraesCS1B01G389900 chr1B 84.488 664 69 22 988 1650 623672549 623673179 2.370000e-175 625.0
2 TraesCS1B01G389900 chr1B 85.714 553 53 16 1114 1650 623679675 623680217 6.780000e-156 560.0
3 TraesCS1B01G389900 chr1B 94.118 153 8 1 1 152 665855265 665855417 6.040000e-57 231.0
4 TraesCS1B01G389900 chr1B 98.611 72 1 0 2733 2804 518809681 518809610 8.150000e-26 128.0
5 TraesCS1B01G389900 chr1B 84.211 76 4 6 656 731 623679312 623679379 1.800000e-07 67.6
6 TraesCS1B01G389900 chr1D 84.025 2529 202 99 315 2724 453211852 453209407 0.000000e+00 2246.0
7 TraesCS1B01G389900 chr1D 85.468 695 61 22 963 1650 453199585 453200246 0.000000e+00 688.0
8 TraesCS1B01G389900 chr1D 85.540 657 54 18 1001 1650 453181698 453182320 0.000000e+00 649.0
9 TraesCS1B01G389900 chr1D 86.504 615 52 15 1041 1650 453134693 453135281 0.000000e+00 647.0
10 TraesCS1B01G389900 chr1D 100.000 29 0 0 656 684 453199331 453199359 1.000000e-03 54.7
11 TraesCS1B01G389900 chr1A 88.037 1956 125 48 458 2339 547909033 547907113 0.000000e+00 2215.0
12 TraesCS1B01G389900 chr1A 85.435 666 55 26 988 1650 547886722 547887348 0.000000e+00 654.0
13 TraesCS1B01G389900 chr1A 84.804 612 44 24 1048 1651 547863952 547864522 1.130000e-158 569.0
14 TraesCS1B01G389900 chr1A 94.000 150 8 1 148 297 393948588 393948440 2.810000e-55 226.0
15 TraesCS1B01G389900 chr1A 82.960 223 11 13 315 519 547914407 547914194 2.870000e-40 176.0
16 TraesCS1B01G389900 chr4B 95.513 156 5 2 1 155 611399717 611399563 6.000000e-62 248.0
17 TraesCS1B01G389900 chr4B 93.506 154 9 1 1 153 622438155 622438002 7.810000e-56 228.0
18 TraesCS1B01G389900 chr4B 97.333 75 1 1 2730 2804 653214427 653214354 2.930000e-25 126.0
19 TraesCS1B01G389900 chr3B 96.644 149 3 2 1 148 149100843 149100696 2.160000e-61 246.0
20 TraesCS1B01G389900 chr3B 95.364 151 6 1 1 150 559890560 559890710 3.610000e-59 239.0
21 TraesCS1B01G389900 chr3B 95.302 149 6 1 1 148 788206303 788206451 4.670000e-58 235.0
22 TraesCS1B01G389900 chr3B 92.810 153 10 1 148 300 571752659 571752508 1.310000e-53 220.0
23 TraesCS1B01G389900 chr3B 93.827 81 4 1 2724 2804 175215923 175216002 1.360000e-23 121.0
24 TraesCS1B01G389900 chr2B 96.053 152 5 1 1 151 704423836 704423685 2.160000e-61 246.0
25 TraesCS1B01G389900 chr2B 95.775 142 6 0 148 289 560444305 560444446 2.170000e-56 230.0
26 TraesCS1B01G389900 chr2B 94.872 78 3 1 2727 2804 116818068 116817992 1.360000e-23 121.0
27 TraesCS1B01G389900 chr2B 94.872 78 3 1 2727 2804 649906350 649906274 1.360000e-23 121.0
28 TraesCS1B01G389900 chr2B 81.967 122 17 4 2685 2804 54012484 54012366 6.390000e-17 99.0
29 TraesCS1B01G389900 chr7D 97.163 141 2 2 148 287 568028732 568028593 1.300000e-58 237.0
30 TraesCS1B01G389900 chr5A 96.479 142 5 0 148 289 458199012 458198871 4.670000e-58 235.0
31 TraesCS1B01G389900 chr5A 85.417 192 26 2 99 289 633019701 633019511 6.130000e-47 198.0
32 TraesCS1B01G389900 chr6D 97.778 135 3 0 148 282 243033024 243032890 1.680000e-57 233.0
33 TraesCS1B01G389900 chr7B 97.080 137 4 0 148 284 595442028 595441892 6.040000e-57 231.0
34 TraesCS1B01G389900 chr7B 94.872 78 3 1 2727 2804 182718941 182718865 1.360000e-23 121.0
35 TraesCS1B01G389900 chr6B 94.118 153 7 2 1 151 106516022 106515870 6.040000e-57 231.0
36 TraesCS1B01G389900 chr6B 96.154 78 2 1 2727 2804 172239769 172239693 2.930000e-25 126.0
37 TraesCS1B01G389900 chrUn 93.506 154 9 1 1 153 60320160 60320007 7.810000e-56 228.0
38 TraesCS1B01G389900 chr7A 94.558 147 5 3 148 294 225633562 225633705 1.010000e-54 224.0
39 TraesCS1B01G389900 chr3A 97.297 74 2 0 2731 2804 469077424 469077497 2.930000e-25 126.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G389900 chr1B 623687642 623690445 2803 True 5179.00 5179 100.0000 1 2804 1 chr1B.!!$R2 2803
1 TraesCS1B01G389900 chr1B 623672549 623673179 630 False 625.00 625 84.4880 988 1650 1 chr1B.!!$F1 662
2 TraesCS1B01G389900 chr1B 623679312 623680217 905 False 313.80 560 84.9625 656 1650 2 chr1B.!!$F3 994
3 TraesCS1B01G389900 chr1D 453209407 453211852 2445 True 2246.00 2246 84.0250 315 2724 1 chr1D.!!$R1 2409
4 TraesCS1B01G389900 chr1D 453181698 453182320 622 False 649.00 649 85.5400 1001 1650 1 chr1D.!!$F2 649
5 TraesCS1B01G389900 chr1D 453134693 453135281 588 False 647.00 647 86.5040 1041 1650 1 chr1D.!!$F1 609
6 TraesCS1B01G389900 chr1D 453199331 453200246 915 False 371.35 688 92.7340 656 1650 2 chr1D.!!$F3 994
7 TraesCS1B01G389900 chr1A 547907113 547909033 1920 True 2215.00 2215 88.0370 458 2339 1 chr1A.!!$R2 1881
8 TraesCS1B01G389900 chr1A 547886722 547887348 626 False 654.00 654 85.4350 988 1650 1 chr1A.!!$F2 662
9 TraesCS1B01G389900 chr1A 547863952 547864522 570 False 569.00 569 84.8040 1048 1651 1 chr1A.!!$F1 603

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
152 153 0.108138 CGGTGGAGTTGGCCTTAGAG 60.108 60.0 3.32 0.0 0.0 2.43 F
990 1072 0.385390 GCCACCAAGAACACCACAAG 59.615 55.0 0.00 0.0 0.0 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1039 1184 0.597637 CGGATCATGTACTCGTGGCC 60.598 60.0 0.0 0.0 0.0 5.36 R
2736 2991 0.033796 TTCGGACGGAGGGAGTACAT 60.034 55.0 0.0 0.0 0.0 2.29 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 1.052287 GCAAGTTTGCGTCGAAATGG 58.948 50.000 0.53 0.00 45.11 3.16
24 25 1.685302 CAAGTTTGCGTCGAAATGGG 58.315 50.000 0.00 0.00 0.00 4.00
25 26 1.001815 CAAGTTTGCGTCGAAATGGGT 60.002 47.619 0.00 0.00 0.00 4.51
26 27 0.872388 AGTTTGCGTCGAAATGGGTC 59.128 50.000 0.00 0.00 0.00 4.46
27 28 0.452122 GTTTGCGTCGAAATGGGTCG 60.452 55.000 0.00 0.00 42.48 4.79
28 29 1.570347 TTTGCGTCGAAATGGGTCGG 61.570 55.000 0.00 0.00 41.43 4.79
29 30 3.861263 GCGTCGAAATGGGTCGGC 61.861 66.667 0.00 0.00 42.17 5.54
30 31 3.192922 CGTCGAAATGGGTCGGCC 61.193 66.667 0.00 0.00 42.62 6.13
40 41 4.629523 GGTCGGCCCGGACACAAA 62.630 66.667 0.73 0.00 38.70 2.83
41 42 2.592287 GTCGGCCCGGACACAAAA 60.592 61.111 0.73 0.00 36.91 2.44
42 43 2.592287 TCGGCCCGGACACAAAAC 60.592 61.111 0.73 0.00 0.00 2.43
43 44 4.020378 CGGCCCGGACACAAAACG 62.020 66.667 0.73 0.00 0.00 3.60
44 45 3.666253 GGCCCGGACACAAAACGG 61.666 66.667 0.73 0.00 46.79 4.44
49 50 3.746108 CGGACACAAAACGGACATG 57.254 52.632 0.00 0.00 0.00 3.21
50 51 1.222300 CGGACACAAAACGGACATGA 58.778 50.000 0.00 0.00 0.00 3.07
51 52 1.804151 CGGACACAAAACGGACATGAT 59.196 47.619 0.00 0.00 0.00 2.45
52 53 2.412716 CGGACACAAAACGGACATGATG 60.413 50.000 0.00 0.00 0.00 3.07
53 54 2.095263 GGACACAAAACGGACATGATGG 60.095 50.000 0.00 0.00 0.00 3.51
54 55 1.885887 ACACAAAACGGACATGATGGG 59.114 47.619 0.00 0.00 0.00 4.00
55 56 1.885887 CACAAAACGGACATGATGGGT 59.114 47.619 0.00 0.00 0.00 4.51
56 57 2.095263 CACAAAACGGACATGATGGGTC 60.095 50.000 0.00 0.00 34.52 4.46
60 61 2.510906 GGACATGATGGGTCCGGG 59.489 66.667 0.00 0.00 44.80 5.73
61 62 2.203209 GACATGATGGGTCCGGGC 60.203 66.667 0.00 0.00 0.00 6.13
62 63 3.774599 GACATGATGGGTCCGGGCC 62.775 68.421 19.72 19.72 0.00 5.80
63 64 4.935495 CATGATGGGTCCGGGCCG 62.935 72.222 21.26 21.46 0.00 6.13
86 87 2.125106 CGCTAAGCCGCCTCCTTT 60.125 61.111 0.00 0.00 0.00 3.11
87 88 2.464459 CGCTAAGCCGCCTCCTTTG 61.464 63.158 0.00 0.00 0.00 2.77
88 89 1.377333 GCTAAGCCGCCTCCTTTGT 60.377 57.895 0.00 0.00 0.00 2.83
89 90 1.369839 GCTAAGCCGCCTCCTTTGTC 61.370 60.000 0.00 0.00 0.00 3.18
90 91 0.250513 CTAAGCCGCCTCCTTTGTCT 59.749 55.000 0.00 0.00 0.00 3.41
91 92 0.249398 TAAGCCGCCTCCTTTGTCTC 59.751 55.000 0.00 0.00 0.00 3.36
92 93 1.484444 AAGCCGCCTCCTTTGTCTCT 61.484 55.000 0.00 0.00 0.00 3.10
93 94 1.003233 GCCGCCTCCTTTGTCTCTT 60.003 57.895 0.00 0.00 0.00 2.85
94 95 0.606673 GCCGCCTCCTTTGTCTCTTT 60.607 55.000 0.00 0.00 0.00 2.52
95 96 1.897560 CCGCCTCCTTTGTCTCTTTT 58.102 50.000 0.00 0.00 0.00 2.27
96 97 2.874457 GCCGCCTCCTTTGTCTCTTTTA 60.874 50.000 0.00 0.00 0.00 1.52
97 98 2.742589 CCGCCTCCTTTGTCTCTTTTAC 59.257 50.000 0.00 0.00 0.00 2.01
98 99 2.742589 CGCCTCCTTTGTCTCTTTTACC 59.257 50.000 0.00 0.00 0.00 2.85
99 100 3.082548 GCCTCCTTTGTCTCTTTTACCC 58.917 50.000 0.00 0.00 0.00 3.69
100 101 3.687125 CCTCCTTTGTCTCTTTTACCCC 58.313 50.000 0.00 0.00 0.00 4.95
101 102 3.073946 CCTCCTTTGTCTCTTTTACCCCA 59.926 47.826 0.00 0.00 0.00 4.96
102 103 4.447180 CCTCCTTTGTCTCTTTTACCCCAA 60.447 45.833 0.00 0.00 0.00 4.12
103 104 5.132043 TCCTTTGTCTCTTTTACCCCAAA 57.868 39.130 0.00 0.00 0.00 3.28
104 105 4.891168 TCCTTTGTCTCTTTTACCCCAAAC 59.109 41.667 0.00 0.00 0.00 2.93
105 106 4.261447 CCTTTGTCTCTTTTACCCCAAACG 60.261 45.833 0.00 0.00 0.00 3.60
106 107 2.853705 TGTCTCTTTTACCCCAAACGG 58.146 47.619 0.00 0.00 0.00 4.44
107 108 2.438763 TGTCTCTTTTACCCCAAACGGA 59.561 45.455 0.00 0.00 0.00 4.69
108 109 2.810274 GTCTCTTTTACCCCAAACGGAC 59.190 50.000 0.00 0.00 0.00 4.79
109 110 2.156917 CTCTTTTACCCCAAACGGACC 58.843 52.381 0.00 0.00 0.00 4.46
110 111 0.876399 CTTTTACCCCAAACGGACCG 59.124 55.000 13.61 13.61 0.00 4.79
111 112 0.536915 TTTTACCCCAAACGGACCGG 60.537 55.000 20.00 0.00 0.00 5.28
112 113 2.408880 TTTACCCCAAACGGACCGGG 62.409 60.000 20.00 11.70 41.71 5.73
126 127 3.616721 CGGGGCGGACAGGATAGG 61.617 72.222 0.00 0.00 0.00 2.57
127 128 3.242291 GGGGCGGACAGGATAGGG 61.242 72.222 0.00 0.00 0.00 3.53
128 129 2.446036 GGGCGGACAGGATAGGGT 60.446 66.667 0.00 0.00 0.00 4.34
129 130 2.508751 GGGCGGACAGGATAGGGTC 61.509 68.421 0.00 0.00 0.00 4.46
130 131 2.728817 GCGGACAGGATAGGGTCG 59.271 66.667 0.00 0.00 34.87 4.79
131 132 2.728817 CGGACAGGATAGGGTCGC 59.271 66.667 0.00 0.00 34.87 5.19
132 133 2.728817 GGACAGGATAGGGTCGCG 59.271 66.667 0.00 0.00 34.87 5.87
133 134 2.027751 GACAGGATAGGGTCGCGC 59.972 66.667 0.00 0.00 0.00 6.86
134 135 3.825833 GACAGGATAGGGTCGCGCG 62.826 68.421 26.76 26.76 0.00 6.86
135 136 4.647615 CAGGATAGGGTCGCGCGG 62.648 72.222 31.69 11.75 0.00 6.46
137 138 4.944372 GGATAGGGTCGCGCGGTG 62.944 72.222 31.69 1.17 0.00 4.94
138 139 4.944372 GATAGGGTCGCGCGGTGG 62.944 72.222 31.69 0.71 0.00 4.61
149 150 2.349755 GCGGTGGAGTTGGCCTTA 59.650 61.111 3.32 0.00 0.00 2.69
150 151 1.745489 GCGGTGGAGTTGGCCTTAG 60.745 63.158 3.32 0.00 0.00 2.18
151 152 1.980052 CGGTGGAGTTGGCCTTAGA 59.020 57.895 3.32 0.00 0.00 2.10
152 153 0.108138 CGGTGGAGTTGGCCTTAGAG 60.108 60.000 3.32 0.00 0.00 2.43
153 154 1.276622 GGTGGAGTTGGCCTTAGAGA 58.723 55.000 3.32 0.00 0.00 3.10
154 155 1.840635 GGTGGAGTTGGCCTTAGAGAT 59.159 52.381 3.32 0.00 0.00 2.75
155 156 2.239907 GGTGGAGTTGGCCTTAGAGATT 59.760 50.000 3.32 0.00 0.00 2.40
156 157 3.308473 GGTGGAGTTGGCCTTAGAGATTT 60.308 47.826 3.32 0.00 0.00 2.17
157 158 3.942115 GTGGAGTTGGCCTTAGAGATTTC 59.058 47.826 3.32 0.00 0.00 2.17
158 159 3.587061 TGGAGTTGGCCTTAGAGATTTCA 59.413 43.478 3.32 0.00 0.00 2.69
159 160 4.042809 TGGAGTTGGCCTTAGAGATTTCAA 59.957 41.667 3.32 0.00 0.00 2.69
160 161 5.010282 GGAGTTGGCCTTAGAGATTTCAAA 58.990 41.667 3.32 0.00 0.00 2.69
161 162 5.654209 GGAGTTGGCCTTAGAGATTTCAAAT 59.346 40.000 3.32 0.00 0.00 2.32
162 163 6.405176 GGAGTTGGCCTTAGAGATTTCAAATG 60.405 42.308 3.32 0.00 0.00 2.32
163 164 5.420104 AGTTGGCCTTAGAGATTTCAAATGG 59.580 40.000 3.32 0.00 0.00 3.16
164 165 5.191727 TGGCCTTAGAGATTTCAAATGGA 57.808 39.130 3.32 0.00 0.00 3.41
165 166 4.949856 TGGCCTTAGAGATTTCAAATGGAC 59.050 41.667 3.32 0.00 0.00 4.02
166 167 5.196695 GGCCTTAGAGATTTCAAATGGACT 58.803 41.667 0.00 0.00 0.00 3.85
167 168 6.069673 TGGCCTTAGAGATTTCAAATGGACTA 60.070 38.462 3.32 0.00 0.00 2.59
168 169 6.261158 GGCCTTAGAGATTTCAAATGGACTAC 59.739 42.308 0.00 0.00 0.00 2.73
169 170 6.261158 GCCTTAGAGATTTCAAATGGACTACC 59.739 42.308 0.00 0.00 0.00 3.18
182 183 3.900971 TGGACTACCACATACGGATGTA 58.099 45.455 14.23 0.00 44.82 2.29
183 184 4.476297 TGGACTACCACATACGGATGTAT 58.524 43.478 14.23 7.46 44.82 2.29
184 185 5.633117 TGGACTACCACATACGGATGTATA 58.367 41.667 14.23 8.27 44.82 1.47
185 186 6.250711 TGGACTACCACATACGGATGTATAT 58.749 40.000 14.23 4.37 44.82 0.86
186 187 7.404481 TGGACTACCACATACGGATGTATATA 58.596 38.462 14.23 5.36 44.82 0.86
187 188 7.555195 TGGACTACCACATACGGATGTATATAG 59.445 40.741 14.23 16.35 44.82 1.31
188 189 7.772292 GGACTACCACATACGGATGTATATAGA 59.228 40.741 22.62 5.04 44.82 1.98
189 190 8.503458 ACTACCACATACGGATGTATATAGAC 57.497 38.462 22.62 0.00 44.82 2.59
190 191 8.105197 ACTACCACATACGGATGTATATAGACA 58.895 37.037 22.62 2.07 44.82 3.41
191 192 7.956328 ACCACATACGGATGTATATAGACAT 57.044 36.000 14.23 12.70 44.82 3.06
193 194 9.642343 ACCACATACGGATGTATATAGACATAT 57.358 33.333 14.23 5.08 44.82 1.78
221 222 7.934855 AGAGTGTAGATTCATTCATTTTGCT 57.065 32.000 0.00 0.00 0.00 3.91
222 223 7.983307 AGAGTGTAGATTCATTCATTTTGCTC 58.017 34.615 0.00 0.00 0.00 4.26
223 224 7.066766 AGAGTGTAGATTCATTCATTTTGCTCC 59.933 37.037 0.00 0.00 0.00 4.70
224 225 5.967674 GTGTAGATTCATTCATTTTGCTCCG 59.032 40.000 0.00 0.00 0.00 4.63
225 226 5.647658 TGTAGATTCATTCATTTTGCTCCGT 59.352 36.000 0.00 0.00 0.00 4.69
226 227 6.821160 TGTAGATTCATTCATTTTGCTCCGTA 59.179 34.615 0.00 0.00 0.00 4.02
227 228 6.949352 AGATTCATTCATTTTGCTCCGTAT 57.051 33.333 0.00 0.00 0.00 3.06
228 229 6.732154 AGATTCATTCATTTTGCTCCGTATG 58.268 36.000 0.00 0.00 0.00 2.39
229 230 5.895636 TTCATTCATTTTGCTCCGTATGT 57.104 34.783 0.00 0.00 0.00 2.29
230 231 6.993786 TTCATTCATTTTGCTCCGTATGTA 57.006 33.333 0.00 0.00 0.00 2.29
231 232 6.603237 TCATTCATTTTGCTCCGTATGTAG 57.397 37.500 0.00 0.00 0.00 2.74
232 233 6.112734 TCATTCATTTTGCTCCGTATGTAGT 58.887 36.000 0.00 0.00 0.00 2.73
233 234 6.257849 TCATTCATTTTGCTCCGTATGTAGTC 59.742 38.462 0.00 0.00 0.00 2.59
234 235 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
235 236 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
236 237 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
237 238 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
238 239 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
239 240 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
240 241 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
241 242 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
242 243 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
243 244 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
244 245 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
245 246 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
246 247 6.588756 TCCGTATGTAGTCACTTGTTGAAATC 59.411 38.462 0.00 0.00 35.39 2.17
247 248 6.590292 CCGTATGTAGTCACTTGTTGAAATCT 59.410 38.462 0.00 0.00 35.39 2.40
248 249 7.201444 CCGTATGTAGTCACTTGTTGAAATCTC 60.201 40.741 0.00 0.00 35.39 2.75
249 250 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
250 251 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
251 252 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
252 253 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
253 254 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
254 255 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
255 256 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
256 257 8.424918 AGTCACTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 35.39 2.52
257 258 9.046296 GTCACTTGTTGAAATCTCTAGAAAGAA 57.954 33.333 0.00 0.00 35.39 2.52
258 259 9.046296 TCACTTGTTGAAATCTCTAGAAAGAAC 57.954 33.333 0.00 0.00 0.00 3.01
259 260 9.050601 CACTTGTTGAAATCTCTAGAAAGAACT 57.949 33.333 0.00 0.00 0.00 3.01
276 277 9.819267 AGAAAGAACTATATTTAGGAACGAAGG 57.181 33.333 0.00 0.00 0.00 3.46
277 278 8.959705 AAAGAACTATATTTAGGAACGAAGGG 57.040 34.615 0.00 0.00 0.00 3.95
278 279 7.909485 AGAACTATATTTAGGAACGAAGGGA 57.091 36.000 0.00 0.00 0.00 4.20
279 280 7.953752 AGAACTATATTTAGGAACGAAGGGAG 58.046 38.462 0.00 0.00 0.00 4.30
280 281 7.564292 AGAACTATATTTAGGAACGAAGGGAGT 59.436 37.037 0.00 0.00 0.00 3.85
281 282 8.773033 AACTATATTTAGGAACGAAGGGAGTA 57.227 34.615 0.00 0.00 0.00 2.59
282 283 8.406730 ACTATATTTAGGAACGAAGGGAGTAG 57.593 38.462 0.00 0.00 0.00 2.57
283 284 8.003629 ACTATATTTAGGAACGAAGGGAGTAGT 58.996 37.037 0.00 0.00 0.00 2.73
284 285 9.512588 CTATATTTAGGAACGAAGGGAGTAGTA 57.487 37.037 0.00 0.00 0.00 1.82
285 286 6.712179 ATTTAGGAACGAAGGGAGTAGTAG 57.288 41.667 0.00 0.00 0.00 2.57
286 287 5.441718 TTAGGAACGAAGGGAGTAGTAGA 57.558 43.478 0.00 0.00 0.00 2.59
287 288 4.523168 AGGAACGAAGGGAGTAGTAGAT 57.477 45.455 0.00 0.00 0.00 1.98
288 289 5.643421 AGGAACGAAGGGAGTAGTAGATA 57.357 43.478 0.00 0.00 0.00 1.98
289 290 6.203526 AGGAACGAAGGGAGTAGTAGATAT 57.796 41.667 0.00 0.00 0.00 1.63
290 291 6.612741 AGGAACGAAGGGAGTAGTAGATATT 58.387 40.000 0.00 0.00 0.00 1.28
291 292 7.068061 AGGAACGAAGGGAGTAGTAGATATTT 58.932 38.462 0.00 0.00 0.00 1.40
292 293 8.223330 AGGAACGAAGGGAGTAGTAGATATTTA 58.777 37.037 0.00 0.00 0.00 1.40
293 294 9.022884 GGAACGAAGGGAGTAGTAGATATTTAT 57.977 37.037 0.00 0.00 0.00 1.40
295 296 9.584008 AACGAAGGGAGTAGTAGATATTTATCA 57.416 33.333 0.00 0.00 35.17 2.15
296 297 9.584008 ACGAAGGGAGTAGTAGATATTTATCAA 57.416 33.333 0.00 0.00 35.17 2.57
333 334 8.499403 ACTCAAAAAGCCATCTAGAATAACTC 57.501 34.615 0.00 0.00 0.00 3.01
335 336 6.538742 TCAAAAAGCCATCTAGAATAACTCCG 59.461 38.462 0.00 0.00 0.00 4.63
337 338 2.029828 AGCCATCTAGAATAACTCCGCG 60.030 50.000 0.00 0.00 0.00 6.46
339 340 2.352814 CCATCTAGAATAACTCCGCGGG 60.353 54.545 27.83 18.67 0.00 6.13
366 372 6.609237 AAAAACGTCTAAGTAACCAGAACC 57.391 37.500 0.00 0.00 0.00 3.62
367 373 3.565905 ACGTCTAAGTAACCAGAACCG 57.434 47.619 0.00 0.00 0.00 4.44
368 374 2.887152 ACGTCTAAGTAACCAGAACCGT 59.113 45.455 0.00 0.00 0.00 4.83
369 375 3.057946 ACGTCTAAGTAACCAGAACCGTC 60.058 47.826 0.00 0.00 0.00 4.79
370 376 3.058016 CGTCTAAGTAACCAGAACCGTCA 60.058 47.826 0.00 0.00 0.00 4.35
371 377 4.557296 CGTCTAAGTAACCAGAACCGTCAA 60.557 45.833 0.00 0.00 0.00 3.18
372 378 4.683320 GTCTAAGTAACCAGAACCGTCAAC 59.317 45.833 0.00 0.00 0.00 3.18
373 379 2.538512 AGTAACCAGAACCGTCAACC 57.461 50.000 0.00 0.00 0.00 3.77
389 395 0.534203 AACCGTACCACACTTGCAGG 60.534 55.000 0.00 0.00 0.00 4.85
409 415 1.285578 CAAACGCCAACAAAACCAGG 58.714 50.000 0.00 0.00 0.00 4.45
521 527 1.539496 CCGTTCTGACCCTTTCAACGA 60.539 52.381 4.17 0.00 39.75 3.85
525 531 4.437659 CGTTCTGACCCTTTCAACGAAAAA 60.438 41.667 0.00 0.00 39.75 1.94
541 547 0.533531 AAAAACAGACGGACCGACCC 60.534 55.000 23.38 9.19 34.64 4.46
542 548 2.387476 AAAACAGACGGACCGACCCC 62.387 60.000 23.38 6.56 34.64 4.95
573 588 4.052518 GCAGCACCCCACTCCCAT 62.053 66.667 0.00 0.00 0.00 4.00
577 592 1.454479 GCACCCCACTCCCATGATG 60.454 63.158 0.00 0.00 0.00 3.07
684 708 6.128769 GGCAATACCGGAATAAACAAAACAAC 60.129 38.462 9.46 0.00 0.00 3.32
685 709 6.128769 GCAATACCGGAATAAACAAAACAACC 60.129 38.462 9.46 0.00 0.00 3.77
686 710 6.651975 ATACCGGAATAAACAAAACAACCA 57.348 33.333 9.46 0.00 0.00 3.67
687 711 5.340439 ACCGGAATAAACAAAACAACCAA 57.660 34.783 9.46 0.00 0.00 3.67
688 712 5.110598 ACCGGAATAAACAAAACAACCAAC 58.889 37.500 9.46 0.00 0.00 3.77
689 713 4.508492 CCGGAATAAACAAAACAACCAACC 59.492 41.667 0.00 0.00 0.00 3.77
690 714 5.109903 CGGAATAAACAAAACAACCAACCA 58.890 37.500 0.00 0.00 0.00 3.67
691 715 5.581085 CGGAATAAACAAAACAACCAACCAA 59.419 36.000 0.00 0.00 0.00 3.67
692 716 6.455780 CGGAATAAACAAAACAACCAACCAAC 60.456 38.462 0.00 0.00 0.00 3.77
693 717 6.183360 GGAATAAACAAAACAACCAACCAACC 60.183 38.462 0.00 0.00 0.00 3.77
694 718 3.771577 AACAAAACAACCAACCAACCA 57.228 38.095 0.00 0.00 0.00 3.67
695 719 3.771577 ACAAAACAACCAACCAACCAA 57.228 38.095 0.00 0.00 0.00 3.67
838 889 0.695347 CAGGCAGAAAGGGGAAGAGT 59.305 55.000 0.00 0.00 0.00 3.24
852 903 4.702081 GAGTGCACGGACGAGCGT 62.702 66.667 12.01 0.00 34.50 5.07
956 1017 1.213296 AACCACCTGAACTCACCACT 58.787 50.000 0.00 0.00 0.00 4.00
958 1019 0.758734 CCACCTGAACTCACCACTCA 59.241 55.000 0.00 0.00 0.00 3.41
961 1043 1.837439 ACCTGAACTCACCACTCAACA 59.163 47.619 0.00 0.00 0.00 3.33
978 1060 2.186160 CACAAGTCAGCGCCACCAA 61.186 57.895 2.29 0.00 0.00 3.67
979 1061 1.893808 ACAAGTCAGCGCCACCAAG 60.894 57.895 2.29 0.00 0.00 3.61
984 1066 1.891919 TCAGCGCCACCAAGAACAC 60.892 57.895 2.29 0.00 0.00 3.32
990 1072 0.385390 GCCACCAAGAACACCACAAG 59.615 55.000 0.00 0.00 0.00 3.16
993 1075 2.099098 CCACCAAGAACACCACAAGAAC 59.901 50.000 0.00 0.00 0.00 3.01
995 1077 3.016736 ACCAAGAACACCACAAGAACAG 58.983 45.455 0.00 0.00 0.00 3.16
1074 1219 3.777925 CGCTTCGACGGCCACTTG 61.778 66.667 2.24 0.00 0.00 3.16
1495 1685 4.493747 GGCTCGGGACCTTCGACG 62.494 72.222 0.00 0.00 32.86 5.12
1668 1867 4.785512 AGCAGCGCGGAAGTCGAG 62.786 66.667 13.03 0.00 42.43 4.04
1677 1876 2.281295 GGAAGTCGAGGTCCGGGTT 61.281 63.158 0.00 0.00 39.14 4.11
1735 1934 2.364842 ATCAGCTCTGGGACGGCT 60.365 61.111 0.00 0.00 36.70 5.52
1740 1939 2.032528 CTCTGGGACGGCTTGCAA 59.967 61.111 0.00 0.00 32.53 4.08
1782 1981 4.475135 GAGCTCTGGTTCCCGCCC 62.475 72.222 6.43 0.00 0.00 6.13
2005 2237 8.292448 GTGCTTCACTTTTTGAATTCAGAGATA 58.708 33.333 17.31 0.00 43.54 1.98
2010 2242 9.784531 TCACTTTTTGAATTCAGAGATAGAACT 57.215 29.630 17.31 0.00 0.00 3.01
2023 2255 7.397476 TCAGAGATAGAACTACACACCATCTTT 59.603 37.037 0.00 0.00 0.00 2.52
2024 2256 7.704472 CAGAGATAGAACTACACACCATCTTTC 59.296 40.741 0.00 0.00 0.00 2.62
2027 2259 8.254508 AGATAGAACTACACACCATCTTTCTTC 58.745 37.037 0.00 0.00 28.28 2.87
2041 2273 7.993183 ACCATCTTTCTTCTTACTCTTTGTTCA 59.007 33.333 0.00 0.00 0.00 3.18
2046 2278 8.657074 TTTCTTCTTACTCTTTGTTCATTCGA 57.343 30.769 0.00 0.00 0.00 3.71
2047 2279 8.657074 TTCTTCTTACTCTTTGTTCATTCGAA 57.343 30.769 0.00 0.00 0.00 3.71
2051 2283 8.833231 TCTTACTCTTTGTTCATTCGAAAGAT 57.167 30.769 0.00 0.00 41.60 2.40
2055 2287 7.746929 ACTCTTTGTTCATTCGAAAGATGATC 58.253 34.615 0.00 1.73 41.60 2.92
2057 2289 7.968246 TCTTTGTTCATTCGAAAGATGATCTC 58.032 34.615 0.00 0.00 41.60 2.75
2060 2292 9.605275 TTTGTTCATTCGAAAGATGATCTCTAT 57.395 29.630 0.00 0.00 41.60 1.98
2061 2293 8.585189 TGTTCATTCGAAAGATGATCTCTATG 57.415 34.615 0.00 0.00 41.60 2.23
2062 2294 8.416329 TGTTCATTCGAAAGATGATCTCTATGA 58.584 33.333 0.00 0.00 41.60 2.15
2096 2338 7.225784 AGCAAACCATGTACATTTATGAACA 57.774 32.000 5.37 0.00 0.00 3.18
2097 2339 7.665690 AGCAAACCATGTACATTTATGAACAA 58.334 30.769 5.37 0.00 0.00 2.83
2104 2347 8.806634 CCATGTACATTTATGAACAAATTTCGG 58.193 33.333 5.37 0.00 0.00 4.30
2106 2349 9.787532 ATGTACATTTATGAACAAATTTCGGAG 57.212 29.630 1.41 0.00 0.00 4.63
2111 2354 8.673711 CATTTATGAACAAATTTCGGAGGTAGA 58.326 33.333 0.00 0.00 0.00 2.59
2116 2359 4.254492 ACAAATTTCGGAGGTAGAGAAGC 58.746 43.478 0.00 0.00 0.00 3.86
2119 2362 4.828072 ATTTCGGAGGTAGAGAAGCTTT 57.172 40.909 0.00 0.00 35.60 3.51
2153 2400 8.006027 GTCATTGCAAAATGTAAAAGAAAGAGC 58.994 33.333 1.71 0.00 0.00 4.09
2155 2402 7.467557 TTGCAAAATGTAAAAGAAAGAGCTG 57.532 32.000 0.00 0.00 0.00 4.24
2159 2406 7.647715 GCAAAATGTAAAAGAAAGAGCTGTGTA 59.352 33.333 0.00 0.00 0.00 2.90
2166 2413 7.391148 AAAAGAAAGAGCTGTGTAACTTGAA 57.609 32.000 0.00 0.00 38.04 2.69
2172 2419 5.564550 AGAGCTGTGTAACTTGAAATCCAT 58.435 37.500 0.00 0.00 38.04 3.41
2173 2420 6.006449 AGAGCTGTGTAACTTGAAATCCATT 58.994 36.000 0.00 0.00 38.04 3.16
2174 2421 6.017400 AGCTGTGTAACTTGAAATCCATTG 57.983 37.500 0.00 0.00 38.04 2.82
2175 2422 5.769662 AGCTGTGTAACTTGAAATCCATTGA 59.230 36.000 0.00 0.00 38.04 2.57
2176 2423 6.265196 AGCTGTGTAACTTGAAATCCATTGAA 59.735 34.615 0.00 0.00 38.04 2.69
2211 2460 8.862325 TGGTAAGATAATTCAAGAGCTTTTCA 57.138 30.769 0.00 0.00 0.00 2.69
2214 2463 6.765915 AGATAATTCAAGAGCTTTTCACCC 57.234 37.500 0.00 0.00 0.00 4.61
2215 2464 6.248433 AGATAATTCAAGAGCTTTTCACCCA 58.752 36.000 0.00 0.00 0.00 4.51
2243 2492 9.654663 GGTACATCACTTTCTATCACTTAACTT 57.345 33.333 0.00 0.00 0.00 2.66
2299 2549 6.073003 GGCATAGCTGGATCAATAGTTTACAC 60.073 42.308 0.00 0.00 0.00 2.90
2300 2550 6.073003 GCATAGCTGGATCAATAGTTTACACC 60.073 42.308 0.00 0.00 0.00 4.16
2315 2565 6.426587 AGTTTACACCTATCTGGCAAATGAT 58.573 36.000 0.00 0.00 40.22 2.45
2316 2566 6.319658 AGTTTACACCTATCTGGCAAATGATG 59.680 38.462 0.00 0.00 40.22 3.07
2320 2570 3.117776 ACCTATCTGGCAAATGATGAGCA 60.118 43.478 0.00 0.00 40.22 4.26
2339 2593 4.323417 AGCAACATCGGTCATTTACAAGA 58.677 39.130 0.00 0.00 0.00 3.02
2343 2597 4.894784 ACATCGGTCATTTACAAGACACT 58.105 39.130 0.00 0.00 36.50 3.55
2350 2604 4.091509 GTCATTTACAAGACACTGGTAGCG 59.908 45.833 0.00 0.00 34.93 4.26
2352 2606 0.109458 TACAAGACACTGGTAGCGCG 60.109 55.000 0.00 0.00 0.00 6.86
2356 2610 3.011760 GACACTGGTAGCGCGTTGC 62.012 63.158 8.43 4.88 46.98 4.17
2374 2628 2.636299 CCACGGGGTAACAAAGTGG 58.364 57.895 0.00 4.51 45.58 4.00
2376 2630 0.948678 CACGGGGTAACAAAGTGGTG 59.051 55.000 0.00 0.00 39.74 4.17
2378 2632 0.536460 CGGGGTAACAAAGTGGTGCT 60.536 55.000 0.00 0.00 39.74 4.40
2379 2633 1.244816 GGGGTAACAAAGTGGTGCTC 58.755 55.000 0.00 0.00 39.74 4.26
2380 2634 1.244816 GGGTAACAAAGTGGTGCTCC 58.755 55.000 0.00 0.00 39.74 4.70
2381 2635 1.202891 GGGTAACAAAGTGGTGCTCCT 60.203 52.381 6.34 0.00 39.74 3.69
2382 2636 2.039348 GGGTAACAAAGTGGTGCTCCTA 59.961 50.000 6.34 0.00 39.74 2.94
2386 2640 5.527582 GGTAACAAAGTGGTGCTCCTATATG 59.472 44.000 6.34 3.45 34.23 1.78
2388 2642 3.117888 ACAAAGTGGTGCTCCTATATGGG 60.118 47.826 6.34 0.00 36.20 4.00
2391 2645 2.157942 AGTGGTGCTCCTATATGGGGAT 60.158 50.000 5.12 0.00 39.16 3.85
2392 2646 2.644798 GTGGTGCTCCTATATGGGGATT 59.355 50.000 5.12 0.00 39.16 3.01
2399 2653 4.202567 GCTCCTATATGGGGATTTTGGTCA 60.203 45.833 5.12 0.00 39.16 4.02
2405 2659 1.691434 TGGGGATTTTGGTCAAAGTGC 59.309 47.619 2.75 2.75 0.00 4.40
2407 2661 2.368548 GGGGATTTTGGTCAAAGTGCTT 59.631 45.455 9.43 0.00 31.08 3.91
2408 2662 3.576550 GGGGATTTTGGTCAAAGTGCTTA 59.423 43.478 9.43 0.00 31.08 3.09
2409 2663 4.222810 GGGGATTTTGGTCAAAGTGCTTAT 59.777 41.667 9.43 0.00 31.08 1.73
2410 2664 5.410924 GGGATTTTGGTCAAAGTGCTTATC 58.589 41.667 9.43 3.76 31.08 1.75
2423 2677 4.360563 AGTGCTTATCGTTCTATTCCGTG 58.639 43.478 0.00 0.00 0.00 4.94
2424 2678 4.097437 AGTGCTTATCGTTCTATTCCGTGA 59.903 41.667 0.00 0.00 0.00 4.35
2425 2679 4.982916 GTGCTTATCGTTCTATTCCGTGAT 59.017 41.667 0.00 0.00 0.00 3.06
2426 2680 6.016527 AGTGCTTATCGTTCTATTCCGTGATA 60.017 38.462 0.00 0.00 0.00 2.15
2427 2681 6.305877 GTGCTTATCGTTCTATTCCGTGATAG 59.694 42.308 0.00 0.00 0.00 2.08
2430 2684 3.961182 TCGTTCTATTCCGTGATAGTGC 58.039 45.455 3.20 0.00 32.60 4.40
2433 2687 4.745125 CGTTCTATTCCGTGATAGTGCATT 59.255 41.667 0.00 0.00 32.60 3.56
2437 2691 1.006086 TCCGTGATAGTGCATTTGCG 58.994 50.000 0.00 0.00 45.83 4.85
2462 2716 3.060940 GCACGATATCTGATTGTGTCACG 60.061 47.826 14.59 0.00 36.16 4.35
2465 2719 3.418944 CGATATCTGATTGTGTCACGACG 59.581 47.826 0.34 0.00 32.22 5.12
2472 2726 0.874175 TTGTGTCACGACGGAAGCAG 60.874 55.000 0.00 0.00 0.00 4.24
2475 2729 0.388520 TGTCACGACGGAAGCAGATG 60.389 55.000 0.00 0.00 0.00 2.90
2476 2730 1.078759 GTCACGACGGAAGCAGATGG 61.079 60.000 0.00 0.00 0.00 3.51
2477 2731 2.125512 ACGACGGAAGCAGATGGC 60.126 61.111 0.00 0.00 45.30 4.40
2490 2744 1.475682 CAGATGGCCTCCTTTTGCTTC 59.524 52.381 3.32 0.00 0.00 3.86
2493 2747 1.984570 GGCCTCCTTTTGCTTCCCC 60.985 63.158 0.00 0.00 0.00 4.81
2494 2748 1.077445 GCCTCCTTTTGCTTCCCCT 59.923 57.895 0.00 0.00 0.00 4.79
2499 2753 2.040947 CTCCTTTTGCTTCCCCTCTCTT 59.959 50.000 0.00 0.00 0.00 2.85
2501 2755 1.543358 CTTTTGCTTCCCCTCTCTTGC 59.457 52.381 0.00 0.00 0.00 4.01
2502 2756 0.478072 TTTGCTTCCCCTCTCTTGCA 59.522 50.000 0.00 0.00 0.00 4.08
2504 2758 0.037303 TGCTTCCCCTCTCTTGCAAG 59.963 55.000 20.81 20.81 0.00 4.01
2506 2760 0.037303 CTTCCCCTCTCTTGCAAGCA 59.963 55.000 21.99 9.51 0.00 3.91
2507 2761 0.250901 TTCCCCTCTCTTGCAAGCAC 60.251 55.000 21.99 0.00 0.00 4.40
2508 2762 1.676967 CCCCTCTCTTGCAAGCACC 60.677 63.158 21.99 0.00 0.00 5.01
2509 2763 2.037136 CCCTCTCTTGCAAGCACCG 61.037 63.158 21.99 9.65 0.00 4.94
2510 2764 1.302033 CCTCTCTTGCAAGCACCGT 60.302 57.895 21.99 0.00 0.00 4.83
2511 2765 0.037326 CCTCTCTTGCAAGCACCGTA 60.037 55.000 21.99 2.18 0.00 4.02
2513 2767 0.391228 TCTCTTGCAAGCACCGTACA 59.609 50.000 21.99 0.62 0.00 2.90
2514 2768 1.202592 TCTCTTGCAAGCACCGTACAA 60.203 47.619 21.99 0.00 0.00 2.41
2515 2769 0.941542 TCTTGCAAGCACCGTACAAC 59.058 50.000 21.99 0.00 0.00 3.32
2516 2770 0.660488 CTTGCAAGCACCGTACAACA 59.340 50.000 14.65 0.00 0.00 3.33
2517 2771 0.378962 TTGCAAGCACCGTACAACAC 59.621 50.000 0.00 0.00 0.00 3.32
2518 2772 0.744771 TGCAAGCACCGTACAACACA 60.745 50.000 0.00 0.00 0.00 3.72
2519 2773 0.316689 GCAAGCACCGTACAACACAC 60.317 55.000 0.00 0.00 0.00 3.82
2520 2774 0.306533 CAAGCACCGTACAACACACC 59.693 55.000 0.00 0.00 0.00 4.16
2521 2775 0.816421 AAGCACCGTACAACACACCC 60.816 55.000 0.00 0.00 0.00 4.61
2522 2776 1.227734 GCACCGTACAACACACCCT 60.228 57.895 0.00 0.00 0.00 4.34
2523 2777 0.816421 GCACCGTACAACACACCCTT 60.816 55.000 0.00 0.00 0.00 3.95
2524 2778 1.223187 CACCGTACAACACACCCTTC 58.777 55.000 0.00 0.00 0.00 3.46
2525 2779 0.831966 ACCGTACAACACACCCTTCA 59.168 50.000 0.00 0.00 0.00 3.02
2535 2789 3.230976 ACACACCCTTCAATTTCCTTCC 58.769 45.455 0.00 0.00 0.00 3.46
2540 2794 3.245407 ACCCTTCAATTTCCTTCCTCCAG 60.245 47.826 0.00 0.00 0.00 3.86
2546 2800 4.601857 TCAATTTCCTTCCTCCAGTAGGTT 59.398 41.667 0.00 0.00 46.62 3.50
2552 2806 3.055747 CCTTCCTCCAGTAGGTTTGTCTC 60.056 52.174 0.00 0.00 46.62 3.36
2553 2807 2.537143 TCCTCCAGTAGGTTTGTCTCC 58.463 52.381 0.00 0.00 46.62 3.71
2556 2810 3.436243 CTCCAGTAGGTTTGTCTCCTCT 58.564 50.000 0.00 0.00 36.60 3.69
2563 2817 6.829298 CAGTAGGTTTGTCTCCTCTATCTACA 59.171 42.308 0.00 0.00 36.60 2.74
2566 2820 7.118496 AGGTTTGTCTCCTCTATCTACATTG 57.882 40.000 0.00 0.00 0.00 2.82
2567 2821 6.670027 AGGTTTGTCTCCTCTATCTACATTGT 59.330 38.462 0.00 0.00 0.00 2.71
2568 2822 6.758886 GGTTTGTCTCCTCTATCTACATTGTG 59.241 42.308 0.00 0.00 0.00 3.33
2569 2823 5.521906 TGTCTCCTCTATCTACATTGTGC 57.478 43.478 0.00 0.00 0.00 4.57
2570 2824 4.956075 TGTCTCCTCTATCTACATTGTGCA 59.044 41.667 0.00 0.00 0.00 4.57
2572 2826 4.038522 TCTCCTCTATCTACATTGTGCAGC 59.961 45.833 0.00 0.00 0.00 5.25
2574 2829 4.056740 CCTCTATCTACATTGTGCAGCAG 58.943 47.826 0.00 0.00 0.00 4.24
2581 2836 3.738830 ACATTGTGCAGCAGAACAAAT 57.261 38.095 7.21 0.00 46.14 2.32
2586 2841 3.859443 TGTGCAGCAGAACAAATTGTTT 58.141 36.364 13.00 0.74 41.28 2.83
2588 2843 3.061006 GTGCAGCAGAACAAATTGTTTCG 60.061 43.478 13.00 8.23 41.28 3.46
2589 2844 3.181492 TGCAGCAGAACAAATTGTTTCGA 60.181 39.130 13.00 0.00 41.28 3.71
2590 2845 3.983344 GCAGCAGAACAAATTGTTTCGAT 59.017 39.130 13.00 3.32 41.28 3.59
2593 2848 4.520492 AGCAGAACAAATTGTTTCGATCCT 59.480 37.500 13.00 1.46 41.28 3.24
2597 2852 5.412904 AGAACAAATTGTTTCGATCCTCCTC 59.587 40.000 13.00 0.00 41.28 3.71
2599 2854 6.049955 ACAAATTGTTTCGATCCTCCTCTA 57.950 37.500 0.00 0.00 0.00 2.43
2600 2855 6.653989 ACAAATTGTTTCGATCCTCCTCTAT 58.346 36.000 0.00 0.00 0.00 1.98
2606 2861 5.069251 TGTTTCGATCCTCCTCTATTCCTTC 59.931 44.000 0.00 0.00 0.00 3.46
2612 2867 3.794399 TCCTCCTCTATTCCTTCCTCTGA 59.206 47.826 0.00 0.00 0.00 3.27
2614 2869 4.141041 CCTCCTCTATTCCTTCCTCTGAGA 60.141 50.000 6.17 0.00 0.00 3.27
2619 2874 6.468651 CCTCTATTCCTTCCTCTGAGATACCT 60.469 46.154 6.17 0.00 0.00 3.08
2623 2878 4.947883 TCCTTCCTCTGAGATACCTTTGA 58.052 43.478 6.17 0.00 0.00 2.69
2625 2880 4.467795 CCTTCCTCTGAGATACCTTTGACA 59.532 45.833 6.17 0.00 0.00 3.58
2626 2881 5.046304 CCTTCCTCTGAGATACCTTTGACAA 60.046 44.000 6.17 0.00 0.00 3.18
2627 2882 6.352565 CCTTCCTCTGAGATACCTTTGACAAT 60.353 42.308 6.17 0.00 0.00 2.71
2628 2883 6.627087 TCCTCTGAGATACCTTTGACAATT 57.373 37.500 6.17 0.00 0.00 2.32
2629 2884 6.409704 TCCTCTGAGATACCTTTGACAATTG 58.590 40.000 6.17 3.24 0.00 2.32
2630 2885 5.587844 CCTCTGAGATACCTTTGACAATTGG 59.412 44.000 10.83 6.28 0.00 3.16
2632 2887 4.661222 TGAGATACCTTTGACAATTGGCA 58.339 39.130 10.79 10.79 0.00 4.92
2633 2888 4.458989 TGAGATACCTTTGACAATTGGCAC 59.541 41.667 15.21 0.00 29.05 5.01
2634 2889 3.440173 AGATACCTTTGACAATTGGCACG 59.560 43.478 15.21 8.17 29.05 5.34
2635 2890 0.031994 ACCTTTGACAATTGGCACGC 59.968 50.000 15.21 0.00 29.05 5.34
2636 2891 0.031857 CCTTTGACAATTGGCACGCA 59.968 50.000 15.21 0.00 29.05 5.24
2637 2892 1.130955 CTTTGACAATTGGCACGCAC 58.869 50.000 15.21 0.00 29.05 5.34
2638 2893 0.249238 TTTGACAATTGGCACGCACC 60.249 50.000 15.21 0.00 29.05 5.01
2639 2894 1.387295 TTGACAATTGGCACGCACCA 61.387 50.000 15.21 0.00 38.16 4.17
2640 2895 1.371635 GACAATTGGCACGCACCAC 60.372 57.895 6.36 0.00 40.19 4.16
2641 2896 2.069465 GACAATTGGCACGCACCACA 62.069 55.000 6.36 0.00 40.19 4.17
2642 2897 1.372004 CAATTGGCACGCACCACAG 60.372 57.895 0.00 0.00 40.19 3.66
2643 2898 2.563798 AATTGGCACGCACCACAGG 61.564 57.895 0.00 0.00 40.19 4.00
2644 2899 2.974692 AATTGGCACGCACCACAGGA 62.975 55.000 0.00 0.00 40.19 3.86
2645 2900 4.927782 TGGCACGCACCACAGGAC 62.928 66.667 0.00 0.00 33.75 3.85
2647 2902 4.927782 GCACGCACCACAGGACCA 62.928 66.667 0.00 0.00 0.00 4.02
2648 2903 2.972505 CACGCACCACAGGACCAC 60.973 66.667 0.00 0.00 0.00 4.16
2649 2904 3.475494 ACGCACCACAGGACCACA 61.475 61.111 0.00 0.00 0.00 4.17
2657 2912 0.319040 CACAGGACCACACTGTCTCG 60.319 60.000 0.00 0.00 45.50 4.04
2659 2914 1.832608 AGGACCACACTGTCTCGCA 60.833 57.895 0.00 0.00 35.54 5.10
2661 2916 1.222115 GGACCACACTGTCTCGCAAC 61.222 60.000 0.00 0.00 35.54 4.17
2683 2938 3.443925 CTCGGCGAGGCTCTGTCA 61.444 66.667 28.52 0.00 0.00 3.58
2711 2966 2.199208 TGGCAATCTTCTCCCTGATGA 58.801 47.619 0.00 0.00 34.09 2.92
2716 2971 5.237048 GCAATCTTCTCCCTGATGATCTAC 58.763 45.833 0.00 0.00 38.23 2.59
2718 2973 6.687393 GCAATCTTCTCCCTGATGATCTACAA 60.687 42.308 0.00 0.00 38.23 2.41
2722 2977 7.865820 TCTTCTCCCTGATGATCTACAAAAAT 58.134 34.615 0.00 0.00 0.00 1.82
2723 2978 8.992349 TCTTCTCCCTGATGATCTACAAAAATA 58.008 33.333 0.00 0.00 0.00 1.40
2724 2979 8.964476 TTCTCCCTGATGATCTACAAAAATAC 57.036 34.615 0.00 0.00 0.00 1.89
2725 2980 7.509546 TCTCCCTGATGATCTACAAAAATACC 58.490 38.462 0.00 0.00 0.00 2.73
2726 2981 7.127186 TCTCCCTGATGATCTACAAAAATACCA 59.873 37.037 0.00 0.00 0.00 3.25
2727 2982 7.638444 TCCCTGATGATCTACAAAAATACCAA 58.362 34.615 0.00 0.00 0.00 3.67
2728 2983 7.556275 TCCCTGATGATCTACAAAAATACCAAC 59.444 37.037 0.00 0.00 0.00 3.77
2729 2984 7.339212 CCCTGATGATCTACAAAAATACCAACA 59.661 37.037 0.00 0.00 0.00 3.33
2730 2985 8.906867 CCTGATGATCTACAAAAATACCAACAT 58.093 33.333 0.00 0.00 0.00 2.71
2744 2999 8.732746 AAATACCAACATTAGACATGTACTCC 57.267 34.615 0.00 0.00 0.00 3.85
2745 3000 5.099042 ACCAACATTAGACATGTACTCCC 57.901 43.478 0.00 0.00 0.00 4.30
2746 3001 4.783227 ACCAACATTAGACATGTACTCCCT 59.217 41.667 0.00 0.00 0.00 4.20
2747 3002 5.104900 ACCAACATTAGACATGTACTCCCTC 60.105 44.000 0.00 0.00 0.00 4.30
2748 3003 5.360591 CAACATTAGACATGTACTCCCTCC 58.639 45.833 0.00 0.00 0.00 4.30
2749 3004 3.637229 ACATTAGACATGTACTCCCTCCG 59.363 47.826 0.00 0.00 0.00 4.63
2750 3005 3.377253 TTAGACATGTACTCCCTCCGT 57.623 47.619 0.00 0.00 0.00 4.69
2751 3006 1.765230 AGACATGTACTCCCTCCGTC 58.235 55.000 0.00 0.00 0.00 4.79
2752 3007 0.745468 GACATGTACTCCCTCCGTCC 59.255 60.000 0.00 0.00 0.00 4.79
2753 3008 1.035932 ACATGTACTCCCTCCGTCCG 61.036 60.000 0.00 0.00 0.00 4.79
2754 3009 0.750546 CATGTACTCCCTCCGTCCGA 60.751 60.000 0.00 0.00 0.00 4.55
2755 3010 0.033796 ATGTACTCCCTCCGTCCGAA 60.034 55.000 0.00 0.00 0.00 4.30
2756 3011 0.251297 TGTACTCCCTCCGTCCGAAA 60.251 55.000 0.00 0.00 0.00 3.46
2757 3012 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
2758 3013 1.479730 GTACTCCCTCCGTCCGAAAAT 59.520 52.381 0.00 0.00 0.00 1.82
2759 3014 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
2760 3015 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
2761 3016 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
2762 3017 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
2763 3018 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
2764 3019 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
2765 3020 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
2766 3021 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
2767 3022 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
2768 3023 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
2769 3024 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
2770 3025 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
2771 3026 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
2772 3027 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
2773 3028 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
2774 3029 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
2775 3030 7.273381 GTCCGAAAATACTTGTCATCAAAATGG 59.727 37.037 0.00 0.00 33.42 3.16
2776 3031 7.175816 TCCGAAAATACTTGTCATCAAAATGGA 59.824 33.333 0.00 0.00 33.42 3.41
2777 3032 7.273381 CCGAAAATACTTGTCATCAAAATGGAC 59.727 37.037 0.00 0.00 33.42 4.02
2778 3033 7.807433 CGAAAATACTTGTCATCAAAATGGACA 59.193 33.333 0.00 0.00 33.42 4.02
2779 3034 9.474920 GAAAATACTTGTCATCAAAATGGACAA 57.525 29.630 0.00 0.00 34.59 3.18
2780 3035 9.829507 AAAATACTTGTCATCAAAATGGACAAA 57.170 25.926 7.70 0.00 34.98 2.83
2781 3036 9.829507 AAATACTTGTCATCAAAATGGACAAAA 57.170 25.926 7.70 0.84 34.98 2.44
2782 3037 9.829507 AATACTTGTCATCAAAATGGACAAAAA 57.170 25.926 7.70 0.55 34.98 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 1.001815 ACCCATTTCGACGCAAACTTG 60.002 47.619 0.00 0.00 0.00 3.16
6 7 1.265905 GACCCATTTCGACGCAAACTT 59.734 47.619 0.00 0.00 0.00 2.66
7 8 0.872388 GACCCATTTCGACGCAAACT 59.128 50.000 0.00 0.00 0.00 2.66
8 9 0.452122 CGACCCATTTCGACGCAAAC 60.452 55.000 0.00 0.00 41.78 2.93
9 10 1.570347 CCGACCCATTTCGACGCAAA 61.570 55.000 0.00 0.00 41.78 3.68
10 11 2.030401 CCGACCCATTTCGACGCAA 61.030 57.895 0.00 0.00 41.78 4.85
11 12 2.433491 CCGACCCATTTCGACGCA 60.433 61.111 0.00 0.00 41.78 5.24
12 13 3.861263 GCCGACCCATTTCGACGC 61.861 66.667 0.00 0.00 41.78 5.19
13 14 3.192922 GGCCGACCCATTTCGACG 61.193 66.667 0.00 0.00 41.78 5.12
23 24 4.629523 TTTGTGTCCGGGCCGACC 62.630 66.667 30.79 17.72 31.35 4.79
24 25 2.592287 TTTTGTGTCCGGGCCGAC 60.592 61.111 30.79 22.88 0.00 4.79
25 26 2.592287 GTTTTGTGTCCGGGCCGA 60.592 61.111 30.79 11.12 0.00 5.54
26 27 4.020378 CGTTTTGTGTCCGGGCCG 62.020 66.667 21.46 21.46 0.00 6.13
27 28 3.666253 CCGTTTTGTGTCCGGGCC 61.666 66.667 2.12 0.00 38.09 5.80
28 29 2.592287 TCCGTTTTGTGTCCGGGC 60.592 61.111 0.00 0.00 41.98 6.13
29 30 0.887387 ATGTCCGTTTTGTGTCCGGG 60.887 55.000 0.00 0.00 41.98 5.73
30 31 0.237235 CATGTCCGTTTTGTGTCCGG 59.763 55.000 0.00 0.00 43.03 5.14
31 32 1.222300 TCATGTCCGTTTTGTGTCCG 58.778 50.000 0.00 0.00 0.00 4.79
32 33 2.095263 CCATCATGTCCGTTTTGTGTCC 60.095 50.000 0.00 0.00 0.00 4.02
33 34 2.095263 CCCATCATGTCCGTTTTGTGTC 60.095 50.000 0.00 0.00 0.00 3.67
34 35 1.885887 CCCATCATGTCCGTTTTGTGT 59.114 47.619 0.00 0.00 0.00 3.72
35 36 1.885887 ACCCATCATGTCCGTTTTGTG 59.114 47.619 0.00 0.00 0.00 3.33
36 37 2.159382 GACCCATCATGTCCGTTTTGT 58.841 47.619 0.00 0.00 0.00 2.83
37 38 1.472480 GGACCCATCATGTCCGTTTTG 59.528 52.381 0.00 0.00 42.63 2.44
38 39 1.834188 GGACCCATCATGTCCGTTTT 58.166 50.000 0.00 0.00 42.63 2.43
39 40 3.569873 GGACCCATCATGTCCGTTT 57.430 52.632 0.00 0.00 42.63 3.60
44 45 2.203209 GCCCGGACCCATCATGTC 60.203 66.667 0.73 0.00 0.00 3.06
45 46 3.809013 GGCCCGGACCCATCATGT 61.809 66.667 0.73 0.00 0.00 3.21
46 47 4.935495 CGGCCCGGACCCATCATG 62.935 72.222 0.73 0.00 0.00 3.07
68 69 4.840005 AAGGAGGCGGCTTAGCGC 62.840 66.667 14.76 0.00 38.18 5.92
69 70 2.125106 AAAGGAGGCGGCTTAGCG 60.125 61.111 14.76 0.00 38.18 4.26
70 71 1.369839 GACAAAGGAGGCGGCTTAGC 61.370 60.000 14.76 0.00 0.00 3.09
71 72 0.250513 AGACAAAGGAGGCGGCTTAG 59.749 55.000 14.76 4.24 0.00 2.18
72 73 0.249398 GAGACAAAGGAGGCGGCTTA 59.751 55.000 14.76 0.00 0.00 3.09
73 74 1.003233 GAGACAAAGGAGGCGGCTT 60.003 57.895 14.76 0.00 0.00 4.35
74 75 1.484444 AAGAGACAAAGGAGGCGGCT 61.484 55.000 13.09 13.09 0.00 5.52
75 76 0.606673 AAAGAGACAAAGGAGGCGGC 60.607 55.000 0.00 0.00 0.00 6.53
76 77 1.897560 AAAAGAGACAAAGGAGGCGG 58.102 50.000 0.00 0.00 0.00 6.13
77 78 2.742589 GGTAAAAGAGACAAAGGAGGCG 59.257 50.000 0.00 0.00 0.00 5.52
78 79 3.082548 GGGTAAAAGAGACAAAGGAGGC 58.917 50.000 0.00 0.00 0.00 4.70
79 80 3.073946 TGGGGTAAAAGAGACAAAGGAGG 59.926 47.826 0.00 0.00 0.00 4.30
80 81 4.367039 TGGGGTAAAAGAGACAAAGGAG 57.633 45.455 0.00 0.00 0.00 3.69
81 82 4.799715 TTGGGGTAAAAGAGACAAAGGA 57.200 40.909 0.00 0.00 0.00 3.36
82 83 4.261447 CGTTTGGGGTAAAAGAGACAAAGG 60.261 45.833 0.00 0.00 30.52 3.11
83 84 4.261447 CCGTTTGGGGTAAAAGAGACAAAG 60.261 45.833 0.00 0.00 30.52 2.77
84 85 3.633065 CCGTTTGGGGTAAAAGAGACAAA 59.367 43.478 0.00 0.00 30.52 2.83
85 86 3.117963 TCCGTTTGGGGTAAAAGAGACAA 60.118 43.478 0.00 0.00 36.01 3.18
86 87 2.438763 TCCGTTTGGGGTAAAAGAGACA 59.561 45.455 0.00 0.00 36.01 3.41
87 88 2.810274 GTCCGTTTGGGGTAAAAGAGAC 59.190 50.000 0.00 0.00 36.01 3.36
88 89 2.224597 GGTCCGTTTGGGGTAAAAGAGA 60.225 50.000 0.00 0.00 36.01 3.10
89 90 2.156917 GGTCCGTTTGGGGTAAAAGAG 58.843 52.381 0.00 0.00 36.01 2.85
90 91 1.542987 CGGTCCGTTTGGGGTAAAAGA 60.543 52.381 2.08 0.00 36.01 2.52
91 92 0.876399 CGGTCCGTTTGGGGTAAAAG 59.124 55.000 2.08 0.00 36.01 2.27
92 93 0.536915 CCGGTCCGTTTGGGGTAAAA 60.537 55.000 11.06 0.00 36.01 1.52
93 94 1.072852 CCGGTCCGTTTGGGGTAAA 59.927 57.895 11.06 0.00 36.01 2.01
94 95 2.749016 CCGGTCCGTTTGGGGTAA 59.251 61.111 11.06 0.00 36.01 2.85
95 96 3.320830 CCCGGTCCGTTTGGGGTA 61.321 66.667 11.06 0.00 39.39 3.69
109 110 3.616721 CCTATCCTGTCCGCCCCG 61.617 72.222 0.00 0.00 0.00 5.73
110 111 3.242291 CCCTATCCTGTCCGCCCC 61.242 72.222 0.00 0.00 0.00 5.80
111 112 2.446036 ACCCTATCCTGTCCGCCC 60.446 66.667 0.00 0.00 0.00 6.13
112 113 2.857744 CGACCCTATCCTGTCCGCC 61.858 68.421 0.00 0.00 0.00 6.13
113 114 2.728817 CGACCCTATCCTGTCCGC 59.271 66.667 0.00 0.00 0.00 5.54
114 115 2.728817 GCGACCCTATCCTGTCCG 59.271 66.667 0.00 0.00 0.00 4.79
115 116 2.728817 CGCGACCCTATCCTGTCC 59.271 66.667 0.00 0.00 0.00 4.02
116 117 2.027751 GCGCGACCCTATCCTGTC 59.972 66.667 12.10 0.00 0.00 3.51
117 118 3.900892 CGCGCGACCCTATCCTGT 61.901 66.667 28.94 0.00 0.00 4.00
118 119 4.647615 CCGCGCGACCCTATCCTG 62.648 72.222 34.63 6.11 0.00 3.86
120 121 4.944372 CACCGCGCGACCCTATCC 62.944 72.222 34.63 0.00 0.00 2.59
121 122 4.944372 CCACCGCGCGACCCTATC 62.944 72.222 34.63 0.00 0.00 2.08
131 132 3.599285 TAAGGCCAACTCCACCGCG 62.599 63.158 5.01 0.00 0.00 6.46
132 133 1.745489 CTAAGGCCAACTCCACCGC 60.745 63.158 5.01 0.00 0.00 5.68
133 134 0.108138 CTCTAAGGCCAACTCCACCG 60.108 60.000 5.01 0.00 0.00 4.94
134 135 1.276622 TCTCTAAGGCCAACTCCACC 58.723 55.000 5.01 0.00 0.00 4.61
135 136 3.636153 AATCTCTAAGGCCAACTCCAC 57.364 47.619 5.01 0.00 0.00 4.02
136 137 3.587061 TGAAATCTCTAAGGCCAACTCCA 59.413 43.478 5.01 0.00 0.00 3.86
137 138 4.222124 TGAAATCTCTAAGGCCAACTCC 57.778 45.455 5.01 0.00 0.00 3.85
138 139 6.405176 CCATTTGAAATCTCTAAGGCCAACTC 60.405 42.308 5.01 0.00 0.00 3.01
139 140 5.420104 CCATTTGAAATCTCTAAGGCCAACT 59.580 40.000 5.01 0.00 0.00 3.16
140 141 5.418840 TCCATTTGAAATCTCTAAGGCCAAC 59.581 40.000 5.01 0.00 0.00 3.77
141 142 5.418840 GTCCATTTGAAATCTCTAAGGCCAA 59.581 40.000 5.01 0.00 0.00 4.52
142 143 4.949856 GTCCATTTGAAATCTCTAAGGCCA 59.050 41.667 5.01 0.00 0.00 5.36
143 144 5.196695 AGTCCATTTGAAATCTCTAAGGCC 58.803 41.667 0.00 0.00 0.00 5.19
144 145 6.261158 GGTAGTCCATTTGAAATCTCTAAGGC 59.739 42.308 0.00 0.00 0.00 4.35
145 146 7.281100 GTGGTAGTCCATTTGAAATCTCTAAGG 59.719 40.741 0.00 0.00 46.20 2.69
146 147 7.824289 TGTGGTAGTCCATTTGAAATCTCTAAG 59.176 37.037 0.00 0.00 46.20 2.18
147 148 7.685481 TGTGGTAGTCCATTTGAAATCTCTAA 58.315 34.615 0.00 0.00 46.20 2.10
148 149 7.252612 TGTGGTAGTCCATTTGAAATCTCTA 57.747 36.000 0.00 0.00 46.20 2.43
149 150 6.126863 TGTGGTAGTCCATTTGAAATCTCT 57.873 37.500 0.00 0.00 46.20 3.10
150 151 7.254455 CGTATGTGGTAGTCCATTTGAAATCTC 60.254 40.741 0.00 0.00 46.20 2.75
151 152 6.538742 CGTATGTGGTAGTCCATTTGAAATCT 59.461 38.462 0.00 0.00 46.20 2.40
152 153 6.238374 CCGTATGTGGTAGTCCATTTGAAATC 60.238 42.308 0.00 0.00 46.20 2.17
153 154 5.588648 CCGTATGTGGTAGTCCATTTGAAAT 59.411 40.000 0.00 0.00 46.20 2.17
154 155 4.938832 CCGTATGTGGTAGTCCATTTGAAA 59.061 41.667 0.00 0.00 46.20 2.69
155 156 4.223255 TCCGTATGTGGTAGTCCATTTGAA 59.777 41.667 0.00 0.00 46.20 2.69
156 157 3.770388 TCCGTATGTGGTAGTCCATTTGA 59.230 43.478 0.00 0.00 46.20 2.69
157 158 4.131649 TCCGTATGTGGTAGTCCATTTG 57.868 45.455 0.00 0.00 46.20 2.32
158 159 4.163458 ACATCCGTATGTGGTAGTCCATTT 59.837 41.667 0.00 0.00 44.79 2.32
159 160 3.709653 ACATCCGTATGTGGTAGTCCATT 59.290 43.478 0.00 0.00 44.79 3.16
160 161 3.305720 ACATCCGTATGTGGTAGTCCAT 58.694 45.455 0.00 0.00 44.79 3.41
161 162 2.742348 ACATCCGTATGTGGTAGTCCA 58.258 47.619 0.00 0.00 44.79 4.02
162 163 6.770746 ATATACATCCGTATGTGGTAGTCC 57.229 41.667 3.56 0.00 45.99 3.85
163 164 8.610896 GTCTATATACATCCGTATGTGGTAGTC 58.389 40.741 3.56 0.00 45.99 2.59
164 165 8.105197 TGTCTATATACATCCGTATGTGGTAGT 58.895 37.037 3.56 0.00 45.99 2.73
165 166 8.502105 TGTCTATATACATCCGTATGTGGTAG 57.498 38.462 3.56 3.93 45.99 3.18
167 168 7.956328 ATGTCTATATACATCCGTATGTGGT 57.044 36.000 3.56 0.00 45.99 4.16
195 196 9.453572 AGCAAAATGAATGAATCTACACTCTAA 57.546 29.630 0.00 0.00 0.00 2.10
196 197 9.102757 GAGCAAAATGAATGAATCTACACTCTA 57.897 33.333 0.00 0.00 0.00 2.43
197 198 7.066766 GGAGCAAAATGAATGAATCTACACTCT 59.933 37.037 0.00 0.00 0.00 3.24
198 199 7.192232 GGAGCAAAATGAATGAATCTACACTC 58.808 38.462 0.00 0.00 0.00 3.51
199 200 6.183360 CGGAGCAAAATGAATGAATCTACACT 60.183 38.462 0.00 0.00 0.00 3.55
200 201 5.967674 CGGAGCAAAATGAATGAATCTACAC 59.032 40.000 0.00 0.00 0.00 2.90
201 202 5.647658 ACGGAGCAAAATGAATGAATCTACA 59.352 36.000 0.00 0.00 0.00 2.74
202 203 6.124088 ACGGAGCAAAATGAATGAATCTAC 57.876 37.500 0.00 0.00 0.00 2.59
203 204 7.498900 ACATACGGAGCAAAATGAATGAATCTA 59.501 33.333 0.00 0.00 0.00 1.98
204 205 6.319658 ACATACGGAGCAAAATGAATGAATCT 59.680 34.615 0.00 0.00 0.00 2.40
205 206 6.498304 ACATACGGAGCAAAATGAATGAATC 58.502 36.000 0.00 0.00 0.00 2.52
206 207 6.455360 ACATACGGAGCAAAATGAATGAAT 57.545 33.333 0.00 0.00 0.00 2.57
207 208 5.895636 ACATACGGAGCAAAATGAATGAA 57.104 34.783 0.00 0.00 0.00 2.57
208 209 6.112734 ACTACATACGGAGCAAAATGAATGA 58.887 36.000 0.00 0.00 0.00 2.57
209 210 6.037062 TGACTACATACGGAGCAAAATGAATG 59.963 38.462 0.00 0.00 0.00 2.67
210 211 6.037172 GTGACTACATACGGAGCAAAATGAAT 59.963 38.462 0.00 0.00 0.00 2.57
211 212 5.350365 GTGACTACATACGGAGCAAAATGAA 59.650 40.000 0.00 0.00 0.00 2.57
212 213 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
213 214 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
214 215 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
215 216 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
216 217 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
217 218 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
218 219 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
219 220 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
220 221 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
221 222 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
222 223 6.590292 AGATTTCAACAAGTGACTACATACGG 59.410 38.462 0.00 0.00 35.39 4.02
223 224 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
224 225 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
226 227 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
227 228 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
228 229 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
229 230 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
230 231 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
231 232 8.594881 TCTTTCTAGAGATTTCAACAAGTGAC 57.405 34.615 0.00 0.00 35.39 3.67
232 233 9.046296 GTTCTTTCTAGAGATTTCAACAAGTGA 57.954 33.333 0.00 0.00 0.00 3.41
233 234 9.050601 AGTTCTTTCTAGAGATTTCAACAAGTG 57.949 33.333 0.00 0.00 0.00 3.16
250 251 9.819267 CCTTCGTTCCTAAATATAGTTCTTTCT 57.181 33.333 0.00 0.00 0.00 2.52
251 252 9.043079 CCCTTCGTTCCTAAATATAGTTCTTTC 57.957 37.037 0.00 0.00 0.00 2.62
252 253 8.765517 TCCCTTCGTTCCTAAATATAGTTCTTT 58.234 33.333 0.00 0.00 0.00 2.52
253 254 8.315220 TCCCTTCGTTCCTAAATATAGTTCTT 57.685 34.615 0.00 0.00 0.00 2.52
254 255 7.564292 ACTCCCTTCGTTCCTAAATATAGTTCT 59.436 37.037 0.00 0.00 0.00 3.01
255 256 7.724287 ACTCCCTTCGTTCCTAAATATAGTTC 58.276 38.462 0.00 0.00 0.00 3.01
256 257 7.672122 ACTCCCTTCGTTCCTAAATATAGTT 57.328 36.000 0.00 0.00 0.00 2.24
257 258 8.003629 ACTACTCCCTTCGTTCCTAAATATAGT 58.996 37.037 0.00 0.00 0.00 2.12
258 259 8.406730 ACTACTCCCTTCGTTCCTAAATATAG 57.593 38.462 0.00 0.00 0.00 1.31
259 260 9.512588 CTACTACTCCCTTCGTTCCTAAATATA 57.487 37.037 0.00 0.00 0.00 0.86
260 261 8.223330 TCTACTACTCCCTTCGTTCCTAAATAT 58.777 37.037 0.00 0.00 0.00 1.28
261 262 7.577303 TCTACTACTCCCTTCGTTCCTAAATA 58.423 38.462 0.00 0.00 0.00 1.40
262 263 6.430007 TCTACTACTCCCTTCGTTCCTAAAT 58.570 40.000 0.00 0.00 0.00 1.40
263 264 5.819991 TCTACTACTCCCTTCGTTCCTAAA 58.180 41.667 0.00 0.00 0.00 1.85
264 265 5.441718 TCTACTACTCCCTTCGTTCCTAA 57.558 43.478 0.00 0.00 0.00 2.69
265 266 5.643421 ATCTACTACTCCCTTCGTTCCTA 57.357 43.478 0.00 0.00 0.00 2.94
266 267 4.523168 ATCTACTACTCCCTTCGTTCCT 57.477 45.455 0.00 0.00 0.00 3.36
267 268 6.897706 AATATCTACTACTCCCTTCGTTCC 57.102 41.667 0.00 0.00 0.00 3.62
269 270 9.584008 TGATAAATATCTACTACTCCCTTCGTT 57.416 33.333 2.40 0.00 33.88 3.85
270 271 9.584008 TTGATAAATATCTACTACTCCCTTCGT 57.416 33.333 2.40 0.00 33.88 3.85
301 302 9.466497 TTCTAGATGGCTTTTTGAGTATTGATT 57.534 29.630 0.00 0.00 0.00 2.57
302 303 9.638176 ATTCTAGATGGCTTTTTGAGTATTGAT 57.362 29.630 0.00 0.00 0.00 2.57
307 308 9.601217 GAGTTATTCTAGATGGCTTTTTGAGTA 57.399 33.333 0.00 0.00 0.00 2.59
308 309 7.554476 GGAGTTATTCTAGATGGCTTTTTGAGT 59.446 37.037 0.00 0.00 0.00 3.41
309 310 7.254590 CGGAGTTATTCTAGATGGCTTTTTGAG 60.255 40.741 0.00 0.00 0.00 3.02
310 311 6.538742 CGGAGTTATTCTAGATGGCTTTTTGA 59.461 38.462 0.00 0.00 0.00 2.69
311 312 6.719365 CGGAGTTATTCTAGATGGCTTTTTG 58.281 40.000 0.00 0.00 0.00 2.44
312 313 5.297029 GCGGAGTTATTCTAGATGGCTTTTT 59.703 40.000 0.00 0.00 0.00 1.94
313 314 4.816925 GCGGAGTTATTCTAGATGGCTTTT 59.183 41.667 0.00 0.00 0.00 2.27
347 353 2.887152 ACGGTTCTGGTTACTTAGACGT 59.113 45.455 0.00 0.00 0.00 4.34
348 354 3.058016 TGACGGTTCTGGTTACTTAGACG 60.058 47.826 0.00 0.00 0.00 4.18
355 361 1.142474 CGGTTGACGGTTCTGGTTAC 58.858 55.000 0.00 0.00 39.42 2.50
367 373 0.584876 GCAAGTGTGGTACGGTTGAC 59.415 55.000 0.00 0.00 0.00 3.18
368 374 0.178301 TGCAAGTGTGGTACGGTTGA 59.822 50.000 0.00 0.00 0.00 3.18
369 375 0.586319 CTGCAAGTGTGGTACGGTTG 59.414 55.000 0.00 0.00 0.00 3.77
370 376 0.534203 CCTGCAAGTGTGGTACGGTT 60.534 55.000 0.00 0.00 0.00 4.44
371 377 1.070786 CCTGCAAGTGTGGTACGGT 59.929 57.895 0.00 0.00 0.00 4.83
372 378 2.325082 GCCTGCAAGTGTGGTACGG 61.325 63.158 0.00 0.00 0.00 4.02
373 379 1.163420 TTGCCTGCAAGTGTGGTACG 61.163 55.000 0.00 0.00 0.00 3.67
389 395 0.649993 CTGGTTTTGTTGGCGTTTGC 59.350 50.000 0.00 0.00 41.71 3.68
409 415 2.355363 TCGGCACACGCACAGTAC 60.355 61.111 0.00 0.00 43.86 2.73
525 531 3.308705 GGGGTCGGTCCGTCTGTT 61.309 66.667 11.88 0.00 37.00 3.16
528 534 4.755507 GAGGGGGTCGGTCCGTCT 62.756 72.222 11.88 2.63 36.55 4.18
537 543 2.607750 TGGACAGCAGAGGGGGTC 60.608 66.667 0.00 0.00 0.00 4.46
541 547 3.324930 TGCCTGGACAGCAGAGGG 61.325 66.667 0.00 0.00 34.69 4.30
573 588 1.218047 GGTGACGCTAGTGGCATCA 59.782 57.895 17.79 4.26 41.02 3.07
577 592 2.434359 GGTGGTGACGCTAGTGGC 60.434 66.667 8.42 4.94 41.78 5.01
684 708 1.460273 CCTCGGGTTTGGTTGGTTGG 61.460 60.000 0.00 0.00 0.00 3.77
685 709 2.037871 CCTCGGGTTTGGTTGGTTG 58.962 57.895 0.00 0.00 0.00 3.77
686 710 1.830847 GCCTCGGGTTTGGTTGGTT 60.831 57.895 0.00 0.00 0.00 3.67
687 711 2.203437 GCCTCGGGTTTGGTTGGT 60.203 61.111 0.00 0.00 0.00 3.67
688 712 2.989253 GGCCTCGGGTTTGGTTGG 60.989 66.667 0.00 0.00 0.00 3.77
689 713 2.989253 GGGCCTCGGGTTTGGTTG 60.989 66.667 0.84 0.00 0.00 3.77
690 714 4.295199 GGGGCCTCGGGTTTGGTT 62.295 66.667 0.84 0.00 0.00 3.67
693 717 3.853698 TTTCGGGGCCTCGGGTTTG 62.854 63.158 28.04 0.00 0.00 2.93
694 718 3.572222 TTTCGGGGCCTCGGGTTT 61.572 61.111 28.04 0.00 0.00 3.27
695 719 4.340246 GTTTCGGGGCCTCGGGTT 62.340 66.667 28.04 0.00 0.00 4.11
956 1017 1.153269 TGGCGCTGACTTGTGTTGA 60.153 52.632 7.64 0.00 0.00 3.18
958 1019 2.186826 GGTGGCGCTGACTTGTGTT 61.187 57.895 7.64 0.00 0.00 3.32
961 1043 1.893808 CTTGGTGGCGCTGACTTGT 60.894 57.895 7.64 0.00 0.00 3.16
978 1060 3.270877 GTGTCTGTTCTTGTGGTGTTCT 58.729 45.455 0.00 0.00 0.00 3.01
979 1061 3.006940 TGTGTCTGTTCTTGTGGTGTTC 58.993 45.455 0.00 0.00 0.00 3.18
984 1066 2.549754 GGTCATGTGTCTGTTCTTGTGG 59.450 50.000 0.00 0.00 0.00 4.17
990 1072 2.481952 GCTGAAGGTCATGTGTCTGTTC 59.518 50.000 0.00 0.00 0.00 3.18
993 1075 1.073964 CGCTGAAGGTCATGTGTCTG 58.926 55.000 0.00 0.00 0.00 3.51
995 1077 1.071605 GACGCTGAAGGTCATGTGTC 58.928 55.000 0.00 0.00 34.56 3.67
1039 1184 0.597637 CGGATCATGTACTCGTGGCC 60.598 60.000 0.00 0.00 0.00 5.36
1044 1189 1.002792 TCGAAGCGGATCATGTACTCG 60.003 52.381 0.00 0.00 0.00 4.18
1384 1574 3.183775 CGGTACTTGTTCTTCTTGTTCCG 59.816 47.826 0.00 0.00 35.86 4.30
1735 1934 2.574006 AGCTTCATCAGGTCTTGCAA 57.426 45.000 0.00 0.00 0.00 4.08
1740 1939 2.948979 CTCGTCTAGCTTCATCAGGTCT 59.051 50.000 0.00 0.00 34.13 3.85
1782 1981 4.292186 TCAGTCCCAAGAATTTCCAGAG 57.708 45.455 0.00 0.00 0.00 3.35
1867 2099 5.197451 TGCAACAGAGGTAAAAAGGAAGAA 58.803 37.500 0.00 0.00 0.00 2.52
2005 2237 6.426646 AGAAGAAAGATGGTGTGTAGTTCT 57.573 37.500 0.00 0.00 0.00 3.01
2008 2240 7.233757 AGAGTAAGAAGAAAGATGGTGTGTAGT 59.766 37.037 0.00 0.00 0.00 2.73
2010 2242 7.540474 AGAGTAAGAAGAAAGATGGTGTGTA 57.460 36.000 0.00 0.00 0.00 2.90
2014 2246 7.736447 ACAAAGAGTAAGAAGAAAGATGGTG 57.264 36.000 0.00 0.00 0.00 4.17
2023 2255 8.657074 TTTCGAATGAACAAAGAGTAAGAAGA 57.343 30.769 0.00 0.00 32.71 2.87
2024 2256 8.765219 TCTTTCGAATGAACAAAGAGTAAGAAG 58.235 33.333 11.02 0.00 32.41 2.85
2027 2259 8.712363 TCATCTTTCGAATGAACAAAGAGTAAG 58.288 33.333 16.60 0.00 39.04 2.34
2069 2311 6.862209 TCATAAATGTACATGGTTTGCTTCC 58.138 36.000 9.63 0.00 0.00 3.46
2070 2312 7.812191 TGTTCATAAATGTACATGGTTTGCTTC 59.188 33.333 9.63 0.00 33.94 3.86
2073 2315 7.881643 TTGTTCATAAATGTACATGGTTTGC 57.118 32.000 9.63 0.00 37.79 3.68
2078 2320 8.806634 CCGAAATTTGTTCATAAATGTACATGG 58.193 33.333 9.63 0.05 37.79 3.66
2096 2338 4.828072 AGCTTCTCTACCTCCGAAATTT 57.172 40.909 0.00 0.00 0.00 1.82
2097 2339 4.828072 AAGCTTCTCTACCTCCGAAATT 57.172 40.909 0.00 0.00 0.00 1.82
2116 2359 8.524870 ACATTTTGCAATGACTTTAGCTAAAG 57.475 30.769 34.41 34.41 42.35 1.85
2119 2362 9.973450 TTTTACATTTTGCAATGACTTTAGCTA 57.027 25.926 7.04 0.00 42.35 3.32
2126 2369 9.252962 CTCTTTCTTTTACATTTTGCAATGACT 57.747 29.630 7.04 0.00 42.35 3.41
2127 2370 8.006027 GCTCTTTCTTTTACATTTTGCAATGAC 58.994 33.333 7.04 0.00 42.35 3.06
2129 2372 8.007716 CAGCTCTTTCTTTTACATTTTGCAATG 58.992 33.333 0.00 0.00 44.90 2.82
2130 2373 7.712205 ACAGCTCTTTCTTTTACATTTTGCAAT 59.288 29.630 0.00 0.00 0.00 3.56
2149 2396 4.973168 TGGATTTCAAGTTACACAGCTCT 58.027 39.130 0.00 0.00 0.00 4.09
2150 2397 5.886960 ATGGATTTCAAGTTACACAGCTC 57.113 39.130 0.00 0.00 0.00 4.09
2183 2430 9.914131 AAAAGCTCTTGAATTATCTTACCAAAC 57.086 29.630 0.00 0.00 0.00 2.93
2188 2435 8.184848 GGGTGAAAAGCTCTTGAATTATCTTAC 58.815 37.037 0.00 0.00 0.00 2.34
2192 2441 6.515272 TGGGTGAAAAGCTCTTGAATTATC 57.485 37.500 0.00 0.00 0.00 1.75
2203 2452 2.969821 TGTACCATGGGTGAAAAGCT 57.030 45.000 18.09 0.00 36.19 3.74
2205 2454 4.335416 AGTGATGTACCATGGGTGAAAAG 58.665 43.478 18.09 0.00 36.19 2.27
2211 2460 5.428457 TGATAGAAAGTGATGTACCATGGGT 59.572 40.000 18.09 4.30 40.16 4.51
2214 2463 9.599866 TTAAGTGATAGAAAGTGATGTACCATG 57.400 33.333 0.00 0.00 0.00 3.66
2215 2464 9.601217 GTTAAGTGATAGAAAGTGATGTACCAT 57.399 33.333 0.00 0.00 0.00 3.55
2263 2513 4.392047 TCCAGCTATGCCAATCTGTTATG 58.608 43.478 0.00 0.00 0.00 1.90
2275 2525 6.073003 GGTGTAAACTATTGATCCAGCTATGC 60.073 42.308 0.00 0.00 0.00 3.14
2299 2549 3.483421 TGCTCATCATTTGCCAGATAGG 58.517 45.455 0.00 0.00 41.84 2.57
2300 2550 4.337274 TGTTGCTCATCATTTGCCAGATAG 59.663 41.667 0.00 0.00 0.00 2.08
2315 2565 3.669536 TGTAAATGACCGATGTTGCTCA 58.330 40.909 0.00 0.00 0.00 4.26
2316 2566 4.391830 TCTTGTAAATGACCGATGTTGCTC 59.608 41.667 0.00 0.00 0.00 4.26
2320 2570 5.179368 CAGTGTCTTGTAAATGACCGATGTT 59.821 40.000 0.00 0.00 32.67 2.71
2325 2575 3.399330 ACCAGTGTCTTGTAAATGACCG 58.601 45.455 0.00 0.00 32.67 4.79
2339 2593 3.041940 GCAACGCGCTACCAGTGT 61.042 61.111 5.73 0.00 37.77 3.55
2352 2606 0.312729 CTTTGTTACCCCGTGGCAAC 59.687 55.000 0.00 0.00 38.25 4.17
2356 2610 2.636299 CCACTTTGTTACCCCGTGG 58.364 57.895 0.00 0.00 39.14 4.94
2357 2611 0.948678 CACCACTTTGTTACCCCGTG 59.051 55.000 0.00 0.00 0.00 4.94
2359 2613 0.536460 AGCACCACTTTGTTACCCCG 60.536 55.000 0.00 0.00 0.00 5.73
2362 2616 2.271944 AGGAGCACCACTTTGTTACC 57.728 50.000 2.07 0.00 38.94 2.85
2363 2617 5.527582 CCATATAGGAGCACCACTTTGTTAC 59.472 44.000 2.07 0.00 41.22 2.50
2364 2618 5.397447 CCCATATAGGAGCACCACTTTGTTA 60.397 44.000 2.07 0.00 41.22 2.41
2374 2628 4.082125 CCAAAATCCCCATATAGGAGCAC 58.918 47.826 0.00 0.00 41.22 4.40
2376 2630 4.202567 TGACCAAAATCCCCATATAGGAGC 60.203 45.833 0.00 0.00 41.22 4.70
2378 2632 6.068498 ACTTTGACCAAAATCCCCATATAGGA 60.068 38.462 0.00 0.00 41.22 2.94
2379 2633 6.040842 CACTTTGACCAAAATCCCCATATAGG 59.959 42.308 0.00 0.00 37.03 2.57
2380 2634 6.461509 GCACTTTGACCAAAATCCCCATATAG 60.462 42.308 0.00 0.00 0.00 1.31
2381 2635 5.362430 GCACTTTGACCAAAATCCCCATATA 59.638 40.000 0.00 0.00 0.00 0.86
2382 2636 4.162131 GCACTTTGACCAAAATCCCCATAT 59.838 41.667 0.00 0.00 0.00 1.78
2386 2640 1.970640 AGCACTTTGACCAAAATCCCC 59.029 47.619 0.00 0.00 0.00 4.81
2388 2642 5.095490 CGATAAGCACTTTGACCAAAATCC 58.905 41.667 0.00 0.00 0.00 3.01
2391 2645 5.298276 AGAACGATAAGCACTTTGACCAAAA 59.702 36.000 0.00 0.00 0.00 2.44
2392 2646 4.819630 AGAACGATAAGCACTTTGACCAAA 59.180 37.500 0.00 0.00 0.00 3.28
2399 2653 5.291128 CACGGAATAGAACGATAAGCACTTT 59.709 40.000 0.00 0.00 0.00 2.66
2405 2659 6.305877 GCACTATCACGGAATAGAACGATAAG 59.694 42.308 11.85 0.00 34.08 1.73
2407 2661 5.239963 TGCACTATCACGGAATAGAACGATA 59.760 40.000 11.85 0.00 34.08 2.92
2408 2662 4.037565 TGCACTATCACGGAATAGAACGAT 59.962 41.667 11.85 0.00 34.08 3.73
2409 2663 3.379057 TGCACTATCACGGAATAGAACGA 59.621 43.478 11.85 0.00 34.08 3.85
2410 2664 3.702330 TGCACTATCACGGAATAGAACG 58.298 45.455 11.85 0.00 34.08 3.95
2423 2677 1.016627 TGCTCCGCAAATGCACTATC 58.983 50.000 6.18 0.00 42.21 2.08
2424 2678 3.173540 TGCTCCGCAAATGCACTAT 57.826 47.368 6.18 0.00 42.21 2.12
2425 2679 4.711892 TGCTCCGCAAATGCACTA 57.288 50.000 6.18 0.00 42.21 2.74
2430 2684 2.096565 CAGATATCGTGCTCCGCAAATG 60.097 50.000 0.00 0.00 41.47 2.32
2433 2687 0.744281 TCAGATATCGTGCTCCGCAA 59.256 50.000 0.00 0.00 41.47 4.85
2437 2691 3.722147 ACACAATCAGATATCGTGCTCC 58.278 45.455 7.39 0.00 0.00 4.70
2450 2704 1.778334 CTTCCGTCGTGACACAATCA 58.222 50.000 6.37 0.00 33.79 2.57
2451 2705 0.438830 GCTTCCGTCGTGACACAATC 59.561 55.000 6.37 0.00 0.00 2.67
2453 2707 0.874175 CTGCTTCCGTCGTGACACAA 60.874 55.000 6.37 0.00 0.00 3.33
2454 2708 1.299850 CTGCTTCCGTCGTGACACA 60.300 57.895 6.37 0.00 0.00 3.72
2455 2709 0.388649 ATCTGCTTCCGTCGTGACAC 60.389 55.000 0.00 0.00 0.00 3.67
2456 2710 0.388520 CATCTGCTTCCGTCGTGACA 60.389 55.000 0.41 0.00 0.00 3.58
2457 2711 1.078759 CCATCTGCTTCCGTCGTGAC 61.079 60.000 0.00 0.00 0.00 3.67
2462 2716 1.522580 GAGGCCATCTGCTTCCGTC 60.523 63.158 5.01 0.00 40.05 4.79
2472 2726 0.820226 GGAAGCAAAAGGAGGCCATC 59.180 55.000 5.01 0.00 0.00 3.51
2475 2729 1.984570 GGGGAAGCAAAAGGAGGCC 60.985 63.158 0.00 0.00 0.00 5.19
2476 2730 0.967887 GAGGGGAAGCAAAAGGAGGC 60.968 60.000 0.00 0.00 0.00 4.70
2477 2731 0.701147 AGAGGGGAAGCAAAAGGAGG 59.299 55.000 0.00 0.00 0.00 4.30
2482 2736 1.133513 TGCAAGAGAGGGGAAGCAAAA 60.134 47.619 0.00 0.00 0.00 2.44
2483 2737 0.478072 TGCAAGAGAGGGGAAGCAAA 59.522 50.000 0.00 0.00 0.00 3.68
2490 2744 1.676967 GGTGCTTGCAAGAGAGGGG 60.677 63.158 30.39 2.64 0.00 4.79
2493 2747 1.071605 GTACGGTGCTTGCAAGAGAG 58.928 55.000 30.39 18.18 0.00 3.20
2494 2748 0.391228 TGTACGGTGCTTGCAAGAGA 59.609 50.000 30.39 12.49 0.00 3.10
2499 2753 0.744771 TGTGTTGTACGGTGCTTGCA 60.745 50.000 0.00 0.00 0.00 4.08
2501 2755 0.306533 GGTGTGTTGTACGGTGCTTG 59.693 55.000 0.00 0.00 0.00 4.01
2502 2756 0.816421 GGGTGTGTTGTACGGTGCTT 60.816 55.000 0.00 0.00 0.00 3.91
2504 2758 0.816421 AAGGGTGTGTTGTACGGTGC 60.816 55.000 0.00 0.00 0.00 5.01
2506 2760 0.831966 TGAAGGGTGTGTTGTACGGT 59.168 50.000 0.00 0.00 0.00 4.83
2507 2761 1.956297 TTGAAGGGTGTGTTGTACGG 58.044 50.000 0.00 0.00 0.00 4.02
2508 2762 4.533222 GAAATTGAAGGGTGTGTTGTACG 58.467 43.478 0.00 0.00 0.00 3.67
2509 2763 4.583073 AGGAAATTGAAGGGTGTGTTGTAC 59.417 41.667 0.00 0.00 0.00 2.90
2510 2764 4.798882 AGGAAATTGAAGGGTGTGTTGTA 58.201 39.130 0.00 0.00 0.00 2.41
2511 2765 3.642141 AGGAAATTGAAGGGTGTGTTGT 58.358 40.909 0.00 0.00 0.00 3.32
2513 2767 3.641436 GGAAGGAAATTGAAGGGTGTGTT 59.359 43.478 0.00 0.00 0.00 3.32
2514 2768 3.117131 AGGAAGGAAATTGAAGGGTGTGT 60.117 43.478 0.00 0.00 0.00 3.72
2515 2769 3.500343 AGGAAGGAAATTGAAGGGTGTG 58.500 45.455 0.00 0.00 0.00 3.82
2516 2770 3.500471 GGAGGAAGGAAATTGAAGGGTGT 60.500 47.826 0.00 0.00 0.00 4.16
2517 2771 3.092301 GGAGGAAGGAAATTGAAGGGTG 58.908 50.000 0.00 0.00 0.00 4.61
2518 2772 2.721906 TGGAGGAAGGAAATTGAAGGGT 59.278 45.455 0.00 0.00 0.00 4.34
2519 2773 3.245407 ACTGGAGGAAGGAAATTGAAGGG 60.245 47.826 0.00 0.00 0.00 3.95
2520 2774 4.039603 ACTGGAGGAAGGAAATTGAAGG 57.960 45.455 0.00 0.00 0.00 3.46
2535 2789 3.436243 AGAGGAGACAAACCTACTGGAG 58.564 50.000 0.00 0.00 37.93 3.86
2540 2794 7.826918 ATGTAGATAGAGGAGACAAACCTAC 57.173 40.000 0.00 0.00 37.93 3.18
2546 2800 5.422012 TGCACAATGTAGATAGAGGAGACAA 59.578 40.000 0.00 0.00 0.00 3.18
2552 2806 4.056740 CTGCTGCACAATGTAGATAGAGG 58.943 47.826 0.00 0.00 31.36 3.69
2553 2807 4.941657 TCTGCTGCACAATGTAGATAGAG 58.058 43.478 0.00 0.00 31.36 2.43
2556 2810 4.831107 TGTTCTGCTGCACAATGTAGATA 58.169 39.130 0.00 0.00 31.36 1.98
2563 2817 4.062677 ACAATTTGTTCTGCTGCACAAT 57.937 36.364 9.37 0.00 32.96 2.71
2566 2820 3.061006 CGAAACAATTTGTTCTGCTGCAC 60.061 43.478 14.80 0.00 40.14 4.57
2567 2821 3.114809 CGAAACAATTTGTTCTGCTGCA 58.885 40.909 14.80 0.88 40.14 4.41
2568 2822 3.371168 TCGAAACAATTTGTTCTGCTGC 58.629 40.909 14.80 0.00 40.14 5.25
2569 2823 4.618489 GGATCGAAACAATTTGTTCTGCTG 59.382 41.667 14.80 4.54 40.14 4.41
2570 2824 4.520492 AGGATCGAAACAATTTGTTCTGCT 59.480 37.500 14.80 8.28 40.14 4.24
2572 2826 5.182001 AGGAGGATCGAAACAATTTGTTCTG 59.818 40.000 14.80 10.46 36.01 3.02
2574 2829 5.412904 AGAGGAGGATCGAAACAATTTGTTC 59.587 40.000 14.80 8.07 36.01 3.18
2581 2836 4.962995 AGGAATAGAGGAGGATCGAAACAA 59.037 41.667 0.00 0.00 34.37 2.83
2586 2841 3.399644 AGGAAGGAATAGAGGAGGATCGA 59.600 47.826 0.00 0.00 34.37 3.59
2588 2843 4.772100 CAGAGGAAGGAATAGAGGAGGATC 59.228 50.000 0.00 0.00 0.00 3.36
2589 2844 4.421911 TCAGAGGAAGGAATAGAGGAGGAT 59.578 45.833 0.00 0.00 0.00 3.24
2590 2845 3.794399 TCAGAGGAAGGAATAGAGGAGGA 59.206 47.826 0.00 0.00 0.00 3.71
2593 2848 5.678142 ATCTCAGAGGAAGGAATAGAGGA 57.322 43.478 0.00 0.00 0.00 3.71
2597 2852 7.288852 TCAAAGGTATCTCAGAGGAAGGAATAG 59.711 40.741 0.00 0.00 0.00 1.73
2599 2854 5.966935 TCAAAGGTATCTCAGAGGAAGGAAT 59.033 40.000 0.00 0.00 0.00 3.01
2600 2855 5.187967 GTCAAAGGTATCTCAGAGGAAGGAA 59.812 44.000 0.00 0.00 0.00 3.36
2606 2861 5.587844 CCAATTGTCAAAGGTATCTCAGAGG 59.412 44.000 4.43 0.00 0.00 3.69
2612 2867 3.440173 CGTGCCAATTGTCAAAGGTATCT 59.560 43.478 4.43 0.00 0.00 1.98
2614 2869 2.094752 GCGTGCCAATTGTCAAAGGTAT 60.095 45.455 4.43 0.00 0.00 2.73
2619 2874 0.249238 GGTGCGTGCCAATTGTCAAA 60.249 50.000 4.43 0.00 0.00 2.69
2623 2878 2.074230 CTGTGGTGCGTGCCAATTGT 62.074 55.000 4.43 0.00 40.68 2.71
2625 2880 2.563798 CCTGTGGTGCGTGCCAATT 61.564 57.895 1.77 0.00 40.68 2.32
2626 2881 2.985282 CCTGTGGTGCGTGCCAAT 60.985 61.111 1.77 0.00 40.68 3.16
2627 2882 4.182433 TCCTGTGGTGCGTGCCAA 62.182 61.111 1.77 0.00 40.68 4.52
2628 2883 4.927782 GTCCTGTGGTGCGTGCCA 62.928 66.667 0.00 0.00 35.93 4.92
2630 2885 4.927782 TGGTCCTGTGGTGCGTGC 62.928 66.667 0.00 0.00 0.00 5.34
2632 2887 3.475494 TGTGGTCCTGTGGTGCGT 61.475 61.111 0.00 0.00 0.00 5.24
2633 2888 2.972505 GTGTGGTCCTGTGGTGCG 60.973 66.667 0.00 0.00 0.00 5.34
2634 2889 1.893808 CAGTGTGGTCCTGTGGTGC 60.894 63.158 0.00 0.00 0.00 5.01
2635 2890 0.532862 GACAGTGTGGTCCTGTGGTG 60.533 60.000 0.00 0.00 43.00 4.17
2636 2891 0.691078 AGACAGTGTGGTCCTGTGGT 60.691 55.000 0.00 0.00 43.00 4.16
2637 2892 0.034059 GAGACAGTGTGGTCCTGTGG 59.966 60.000 0.00 0.00 43.00 4.17
2638 2893 0.319040 CGAGACAGTGTGGTCCTGTG 60.319 60.000 0.00 0.00 43.00 3.66
2639 2894 2.041976 CGAGACAGTGTGGTCCTGT 58.958 57.895 0.00 0.00 45.52 4.00
2640 2895 1.373497 GCGAGACAGTGTGGTCCTG 60.373 63.158 0.00 0.00 38.59 3.86
2641 2896 1.399744 TTGCGAGACAGTGTGGTCCT 61.400 55.000 0.00 0.00 38.59 3.85
2642 2897 1.069090 TTGCGAGACAGTGTGGTCC 59.931 57.895 0.00 0.00 38.59 4.46
2643 2898 1.222115 GGTTGCGAGACAGTGTGGTC 61.222 60.000 0.00 0.00 38.08 4.02
2644 2899 1.227556 GGTTGCGAGACAGTGTGGT 60.228 57.895 0.00 0.00 0.00 4.16
2645 2900 1.961277 GGGTTGCGAGACAGTGTGG 60.961 63.158 0.00 0.00 0.00 4.17
2646 2901 1.069765 AGGGTTGCGAGACAGTGTG 59.930 57.895 0.00 0.00 0.00 3.82
2647 2902 1.069765 CAGGGTTGCGAGACAGTGT 59.930 57.895 0.00 0.00 0.00 3.55
2648 2903 2.320587 GCAGGGTTGCGAGACAGTG 61.321 63.158 0.00 0.00 41.13 3.66
2649 2904 2.031163 GCAGGGTTGCGAGACAGT 59.969 61.111 0.00 0.00 41.13 3.55
2669 2924 2.202987 CCATGACAGAGCCTCGCC 60.203 66.667 0.00 0.00 0.00 5.54
2672 2927 0.107312 ATGTGCCATGACAGAGCCTC 60.107 55.000 0.00 0.00 0.00 4.70
2673 2928 0.393944 CATGTGCCATGACAGAGCCT 60.394 55.000 8.92 0.00 0.00 4.58
2678 2933 0.821517 ATTGCCATGTGCCATGACAG 59.178 50.000 14.52 2.46 40.16 3.51
2683 2938 2.029623 GAGAAGATTGCCATGTGCCAT 58.970 47.619 4.07 0.00 40.16 4.40
2703 2958 7.339212 TGTTGGTATTTTTGTAGATCATCAGGG 59.661 37.037 0.00 0.00 0.00 4.45
2718 2973 9.174166 GGAGTACATGTCTAATGTTGGTATTTT 57.826 33.333 0.00 0.00 33.76 1.82
2722 2977 5.962031 AGGGAGTACATGTCTAATGTTGGTA 59.038 40.000 0.00 0.00 33.76 3.25
2723 2978 4.783227 AGGGAGTACATGTCTAATGTTGGT 59.217 41.667 0.00 0.00 33.76 3.67
2724 2979 5.359194 AGGGAGTACATGTCTAATGTTGG 57.641 43.478 0.00 0.00 33.76 3.77
2725 2980 5.360591 GGAGGGAGTACATGTCTAATGTTG 58.639 45.833 0.00 0.00 33.76 3.33
2726 2981 4.099573 CGGAGGGAGTACATGTCTAATGTT 59.900 45.833 0.00 0.00 33.76 2.71
2727 2982 3.637229 CGGAGGGAGTACATGTCTAATGT 59.363 47.826 0.00 0.00 36.13 2.71
2728 2983 3.637229 ACGGAGGGAGTACATGTCTAATG 59.363 47.826 0.00 0.00 0.00 1.90
2729 2984 3.890147 GACGGAGGGAGTACATGTCTAAT 59.110 47.826 0.00 0.00 0.00 1.73
2730 2985 3.285484 GACGGAGGGAGTACATGTCTAA 58.715 50.000 0.00 0.00 0.00 2.10
2731 2986 2.422519 GGACGGAGGGAGTACATGTCTA 60.423 54.545 0.00 0.00 0.00 2.59
2732 2987 1.685491 GGACGGAGGGAGTACATGTCT 60.685 57.143 0.00 0.00 0.00 3.41
2733 2988 0.745468 GGACGGAGGGAGTACATGTC 59.255 60.000 0.00 0.00 0.00 3.06
2734 2989 1.035932 CGGACGGAGGGAGTACATGT 61.036 60.000 2.69 2.69 0.00 3.21
2735 2990 0.750546 TCGGACGGAGGGAGTACATG 60.751 60.000 0.00 0.00 0.00 3.21
2736 2991 0.033796 TTCGGACGGAGGGAGTACAT 60.034 55.000 0.00 0.00 0.00 2.29
2737 2992 0.251297 TTTCGGACGGAGGGAGTACA 60.251 55.000 0.00 0.00 0.00 2.90
2738 2993 0.890683 TTTTCGGACGGAGGGAGTAC 59.109 55.000 0.00 0.00 0.00 2.73
2739 2994 1.856629 ATTTTCGGACGGAGGGAGTA 58.143 50.000 0.00 0.00 0.00 2.59
2740 2995 1.479730 GTATTTTCGGACGGAGGGAGT 59.520 52.381 0.00 0.00 0.00 3.85
2741 2996 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
2742 2997 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
2743 2998 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
2744 2999 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
2745 3000 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
2746 3001 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
2747 3002 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
2748 3003 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
2749 3004 7.273381 CCATTTTGATGACAAGTATTTTCGGAC 59.727 37.037 0.00 0.00 37.32 4.79
2750 3005 7.175816 TCCATTTTGATGACAAGTATTTTCGGA 59.824 33.333 0.00 0.00 37.32 4.55
2751 3006 7.273381 GTCCATTTTGATGACAAGTATTTTCGG 59.727 37.037 0.00 0.00 37.32 4.30
2752 3007 7.807433 TGTCCATTTTGATGACAAGTATTTTCG 59.193 33.333 0.00 0.00 37.32 3.46
2753 3008 9.474920 TTGTCCATTTTGATGACAAGTATTTTC 57.525 29.630 0.00 0.00 37.32 2.29
2754 3009 9.829507 TTTGTCCATTTTGATGACAAGTATTTT 57.170 25.926 0.00 0.00 37.13 1.82
2755 3010 9.829507 TTTTGTCCATTTTGATGACAAGTATTT 57.170 25.926 0.00 0.00 37.13 1.40
2756 3011 9.829507 TTTTTGTCCATTTTGATGACAAGTATT 57.170 25.926 0.00 0.00 37.13 1.89


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.