Multiple sequence alignment - TraesCS1B01G389800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G389800 chr1B 100.000 2660 0 0 1 2660 623678500 623681159 0.000000e+00 4913.0
1 TraesCS1B01G389800 chr1B 86.367 1335 94 29 573 1873 623672053 623673333 0.000000e+00 1376.0
2 TraesCS1B01G389800 chr1B 100.000 455 0 0 2813 3267 623681312 623681766 0.000000e+00 841.0
3 TraesCS1B01G389800 chr1B 86.029 544 50 16 1185 1718 623689323 623688796 7.920000e-156 560.0
4 TraesCS1B01G389800 chr1B 87.912 91 5 2 887 977 623666183 623666267 5.770000e-18 102.0
5 TraesCS1B01G389800 chr1B 75.566 221 46 8 267 483 623671280 623671496 5.770000e-18 102.0
6 TraesCS1B01G389800 chr1B 82.500 80 4 3 2001 2080 623673417 623673486 9.790000e-06 62.1
7 TraesCS1B01G389800 chr1A 85.978 1569 90 47 581 2090 547886203 547887700 0.000000e+00 1559.0
8 TraesCS1B01G389800 chr1A 81.385 924 103 34 1186 2087 547864019 547864895 0.000000e+00 689.0
9 TraesCS1B01G389800 chr1A 86.183 579 54 12 1156 1718 547908372 547907804 1.300000e-168 603.0
10 TraesCS1B01G389800 chr1A 90.879 307 24 3 2113 2417 547887684 547887988 3.030000e-110 409.0
11 TraesCS1B01G389800 chr1A 89.105 257 24 4 2400 2655 547888052 547888305 1.890000e-82 316.0
12 TraesCS1B01G389800 chr1A 85.306 245 22 6 2813 3057 547892015 547892245 1.170000e-59 241.0
13 TraesCS1B01G389800 chr1D 86.275 1479 90 54 513 1926 453199020 453200450 0.000000e+00 1502.0
14 TraesCS1B01G389800 chr1D 89.435 814 48 13 1031 1832 453181647 453182434 0.000000e+00 992.0
15 TraesCS1B01G389800 chr1D 82.732 915 99 35 1185 2087 453134766 453135633 0.000000e+00 760.0
16 TraesCS1B01G389800 chr1D 89.170 554 46 5 2113 2655 453200554 453201104 0.000000e+00 678.0
17 TraesCS1B01G389800 chr1D 86.004 543 52 15 1185 1718 453211017 453210490 7.920000e-156 560.0
18 TraesCS1B01G389800 chr1D 94.694 245 13 0 2813 3057 453201209 453201453 6.610000e-102 381.0
19 TraesCS1B01G389800 chr1D 83.480 454 23 19 586 1021 453181173 453181592 3.080000e-100 375.0
20 TraesCS1B01G389800 chr1D 96.396 111 4 0 1978 2088 453200458 453200568 2.000000e-42 183.0
21 TraesCS1B01G389800 chr1D 91.803 61 3 2 926 986 453134454 453134512 2.090000e-12 84.2
22 TraesCS1B01G389800 chr5D 97.630 211 5 0 3057 3267 71791668 71791458 2.400000e-96 363.0
23 TraesCS1B01G389800 chr5D 97.596 208 5 0 3057 3264 248187124 248187331 1.110000e-94 357.0
24 TraesCS1B01G389800 chr5D 97.596 208 5 0 3057 3264 334861686 334861893 1.110000e-94 357.0
25 TraesCS1B01G389800 chr5D 96.682 211 7 0 3057 3267 259083927 259083717 5.190000e-93 351.0
26 TraesCS1B01G389800 chr6D 97.596 208 5 0 3057 3264 468306715 468306922 1.110000e-94 357.0
27 TraesCS1B01G389800 chrUn 97.115 208 6 0 3057 3264 159606608 159606815 5.190000e-93 351.0
28 TraesCS1B01G389800 chr7B 97.115 208 6 0 3057 3264 715011674 715011881 5.190000e-93 351.0
29 TraesCS1B01G389800 chr4D 96.682 211 7 0 3057 3267 81045318 81045108 5.190000e-93 351.0
30 TraesCS1B01G389800 chr3D 97.115 208 6 0 3057 3264 15553503 15553710 5.190000e-93 351.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G389800 chr1B 623678500 623681766 3266 False 2877.000000 4913 100.000000 1 3267 2 chr1B.!!$F3 3266
1 TraesCS1B01G389800 chr1B 623688796 623689323 527 True 560.000000 560 86.029000 1185 1718 1 chr1B.!!$R1 533
2 TraesCS1B01G389800 chr1B 623671280 623673486 2206 False 513.366667 1376 81.477667 267 2080 3 chr1B.!!$F2 1813
3 TraesCS1B01G389800 chr1A 547864019 547864895 876 False 689.000000 689 81.385000 1186 2087 1 chr1A.!!$F1 901
4 TraesCS1B01G389800 chr1A 547886203 547892245 6042 False 631.250000 1559 87.817000 581 3057 4 chr1A.!!$F2 2476
5 TraesCS1B01G389800 chr1A 547907804 547908372 568 True 603.000000 603 86.183000 1156 1718 1 chr1A.!!$R1 562
6 TraesCS1B01G389800 chr1D 453199020 453201453 2433 False 686.000000 1502 91.633750 513 3057 4 chr1D.!!$F3 2544
7 TraesCS1B01G389800 chr1D 453181173 453182434 1261 False 683.500000 992 86.457500 586 1832 2 chr1D.!!$F2 1246
8 TraesCS1B01G389800 chr1D 453210490 453211017 527 True 560.000000 560 86.004000 1185 1718 1 chr1D.!!$R1 533
9 TraesCS1B01G389800 chr1D 453134454 453135633 1179 False 422.100000 760 87.267500 926 2087 2 chr1D.!!$F1 1161

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
667 1165 0.169894 GACTGACGGACCGACCTTAC 59.830 60.0 23.38 3.53 36.31 2.34 F
1941 2669 0.313987 TAGAGTGGTGTCAGTGTGCG 59.686 55.0 0.00 0.00 0.00 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1953 2681 0.178767 ACAAGTGTGCTGACTGCTGA 59.821 50.0 5.87 0.0 43.37 4.26 R
3169 7578 0.172578 GCAAAAAGATACCCGCACCC 59.827 55.0 0.00 0.0 0.00 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.579270 CGGATCATCGATTCATCATGTG 57.421 45.455 13.66 0.00 0.00 3.21
22 23 3.992427 CGGATCATCGATTCATCATGTGT 59.008 43.478 13.66 0.00 0.00 3.72
23 24 4.450080 CGGATCATCGATTCATCATGTGTT 59.550 41.667 13.66 0.00 0.00 3.32
24 25 5.634859 CGGATCATCGATTCATCATGTGTTA 59.365 40.000 13.66 0.00 0.00 2.41
25 26 6.312180 CGGATCATCGATTCATCATGTGTTAT 59.688 38.462 13.66 0.00 0.00 1.89
26 27 7.148523 CGGATCATCGATTCATCATGTGTTATT 60.149 37.037 13.66 0.00 0.00 1.40
27 28 8.509690 GGATCATCGATTCATCATGTGTTATTT 58.490 33.333 13.66 0.00 0.00 1.40
28 29 9.888878 GATCATCGATTCATCATGTGTTATTTT 57.111 29.630 0.00 0.00 0.00 1.82
38 39 8.962679 TCATCATGTGTTATTTTACTTAACCCC 58.037 33.333 0.00 0.00 0.00 4.95
39 40 8.744652 CATCATGTGTTATTTTACTTAACCCCA 58.255 33.333 0.00 0.00 0.00 4.96
40 41 8.113173 TCATGTGTTATTTTACTTAACCCCAC 57.887 34.615 0.00 0.00 0.00 4.61
41 42 7.724506 TCATGTGTTATTTTACTTAACCCCACA 59.275 33.333 0.00 0.00 0.00 4.17
42 43 7.893124 TGTGTTATTTTACTTAACCCCACAA 57.107 32.000 0.00 0.00 0.00 3.33
43 44 7.714703 TGTGTTATTTTACTTAACCCCACAAC 58.285 34.615 0.00 0.00 0.00 3.32
44 45 7.147312 GTGTTATTTTACTTAACCCCACAACC 58.853 38.462 0.00 0.00 0.00 3.77
45 46 6.267242 TGTTATTTTACTTAACCCCACAACCC 59.733 38.462 0.00 0.00 0.00 4.11
46 47 4.539596 TTTTACTTAACCCCACAACCCT 57.460 40.909 0.00 0.00 0.00 4.34
47 48 4.539596 TTTACTTAACCCCACAACCCTT 57.460 40.909 0.00 0.00 0.00 3.95
48 49 4.539596 TTACTTAACCCCACAACCCTTT 57.460 40.909 0.00 0.00 0.00 3.11
49 50 3.408157 ACTTAACCCCACAACCCTTTT 57.592 42.857 0.00 0.00 0.00 2.27
50 51 3.726790 ACTTAACCCCACAACCCTTTTT 58.273 40.909 0.00 0.00 0.00 1.94
51 52 4.881361 ACTTAACCCCACAACCCTTTTTA 58.119 39.130 0.00 0.00 0.00 1.52
52 53 4.650588 ACTTAACCCCACAACCCTTTTTAC 59.349 41.667 0.00 0.00 0.00 2.01
53 54 3.408157 AACCCCACAACCCTTTTTACT 57.592 42.857 0.00 0.00 0.00 2.24
54 55 2.953453 ACCCCACAACCCTTTTTACTC 58.047 47.619 0.00 0.00 0.00 2.59
55 56 2.244695 CCCCACAACCCTTTTTACTCC 58.755 52.381 0.00 0.00 0.00 3.85
56 57 2.425102 CCCCACAACCCTTTTTACTCCA 60.425 50.000 0.00 0.00 0.00 3.86
57 58 3.506398 CCCACAACCCTTTTTACTCCAT 58.494 45.455 0.00 0.00 0.00 3.41
58 59 3.901222 CCCACAACCCTTTTTACTCCATT 59.099 43.478 0.00 0.00 0.00 3.16
59 60 4.346709 CCCACAACCCTTTTTACTCCATTT 59.653 41.667 0.00 0.00 0.00 2.32
60 61 5.510690 CCCACAACCCTTTTTACTCCATTTC 60.511 44.000 0.00 0.00 0.00 2.17
61 62 5.510690 CCACAACCCTTTTTACTCCATTTCC 60.511 44.000 0.00 0.00 0.00 3.13
62 63 4.591498 ACAACCCTTTTTACTCCATTTCCC 59.409 41.667 0.00 0.00 0.00 3.97
63 64 4.759793 ACCCTTTTTACTCCATTTCCCT 57.240 40.909 0.00 0.00 0.00 4.20
64 65 5.087923 ACCCTTTTTACTCCATTTCCCTT 57.912 39.130 0.00 0.00 0.00 3.95
65 66 4.838423 ACCCTTTTTACTCCATTTCCCTTG 59.162 41.667 0.00 0.00 0.00 3.61
66 67 4.838423 CCCTTTTTACTCCATTTCCCTTGT 59.162 41.667 0.00 0.00 0.00 3.16
67 68 6.014012 CCCTTTTTACTCCATTTCCCTTGTA 58.986 40.000 0.00 0.00 0.00 2.41
68 69 6.152831 CCCTTTTTACTCCATTTCCCTTGTAG 59.847 42.308 0.00 0.00 0.00 2.74
69 70 6.719829 CCTTTTTACTCCATTTCCCTTGTAGT 59.280 38.462 0.00 0.00 0.00 2.73
70 71 7.886446 CCTTTTTACTCCATTTCCCTTGTAGTA 59.114 37.037 0.00 0.00 0.00 1.82
71 72 8.625786 TTTTTACTCCATTTCCCTTGTAGTAC 57.374 34.615 0.00 0.00 0.00 2.73
72 73 6.938698 TTACTCCATTTCCCTTGTAGTACA 57.061 37.500 0.00 0.00 0.00 2.90
73 74 7.504926 TTACTCCATTTCCCTTGTAGTACAT 57.495 36.000 3.28 0.00 0.00 2.29
74 75 5.745227 ACTCCATTTCCCTTGTAGTACATG 58.255 41.667 3.28 6.51 0.00 3.21
75 76 5.487488 ACTCCATTTCCCTTGTAGTACATGA 59.513 40.000 15.81 5.84 0.00 3.07
76 77 5.989477 TCCATTTCCCTTGTAGTACATGAG 58.011 41.667 15.81 6.41 0.00 2.90
77 78 5.487488 TCCATTTCCCTTGTAGTACATGAGT 59.513 40.000 15.81 0.00 0.00 3.41
78 79 6.012858 TCCATTTCCCTTGTAGTACATGAGTT 60.013 38.462 15.81 0.00 0.00 3.01
79 80 7.181305 TCCATTTCCCTTGTAGTACATGAGTTA 59.819 37.037 15.81 0.00 0.00 2.24
80 81 7.827236 CCATTTCCCTTGTAGTACATGAGTTAA 59.173 37.037 15.81 6.60 0.00 2.01
81 82 9.226606 CATTTCCCTTGTAGTACATGAGTTAAA 57.773 33.333 15.81 8.73 0.00 1.52
82 83 8.611654 TTTCCCTTGTAGTACATGAGTTAAAC 57.388 34.615 15.81 0.00 0.00 2.01
83 84 7.549147 TCCCTTGTAGTACATGAGTTAAACT 57.451 36.000 15.81 0.00 0.00 2.66
84 85 7.970102 TCCCTTGTAGTACATGAGTTAAACTT 58.030 34.615 15.81 0.00 0.00 2.66
85 86 8.434392 TCCCTTGTAGTACATGAGTTAAACTTT 58.566 33.333 15.81 0.00 0.00 2.66
86 87 9.063615 CCCTTGTAGTACATGAGTTAAACTTTT 57.936 33.333 15.81 0.00 0.00 2.27
93 94 9.841295 AGTACATGAGTTAAACTTTTTACTCCA 57.159 29.630 14.95 6.83 42.83 3.86
105 106 7.765695 ACTTTTTACTCCATTCATCATGTGT 57.234 32.000 0.00 0.00 0.00 3.72
106 107 8.181904 ACTTTTTACTCCATTCATCATGTGTT 57.818 30.769 0.00 0.00 0.00 3.32
107 108 9.295825 ACTTTTTACTCCATTCATCATGTGTTA 57.704 29.630 0.00 0.00 0.00 2.41
188 189 9.463443 AAAGTCACATCTATTGTAAAAGTTTGC 57.537 29.630 0.00 0.00 36.57 3.68
189 190 8.396272 AGTCACATCTATTGTAAAAGTTTGCT 57.604 30.769 0.00 0.00 36.57 3.91
190 191 8.292448 AGTCACATCTATTGTAAAAGTTTGCTG 58.708 33.333 0.00 0.00 36.57 4.41
191 192 8.289618 GTCACATCTATTGTAAAAGTTTGCTGA 58.710 33.333 0.00 0.00 36.57 4.26
192 193 8.845227 TCACATCTATTGTAAAAGTTTGCTGAA 58.155 29.630 0.00 0.00 36.57 3.02
193 194 9.462174 CACATCTATTGTAAAAGTTTGCTGAAA 57.538 29.630 0.00 0.00 36.57 2.69
203 204 9.937577 GTAAAAGTTTGCTGAAAATATAAAGCG 57.062 29.630 0.00 0.00 38.53 4.68
204 205 8.810652 AAAAGTTTGCTGAAAATATAAAGCGA 57.189 26.923 0.00 0.00 38.53 4.93
205 206 8.810652 AAAGTTTGCTGAAAATATAAAGCGAA 57.189 26.923 0.00 0.00 38.53 4.70
206 207 8.986477 AAGTTTGCTGAAAATATAAAGCGAAT 57.014 26.923 0.00 0.00 40.28 3.34
207 208 8.620533 AGTTTGCTGAAAATATAAAGCGAATC 57.379 30.769 0.00 0.00 40.28 2.52
208 209 8.243426 AGTTTGCTGAAAATATAAAGCGAATCA 58.757 29.630 0.00 0.00 40.28 2.57
209 210 7.969387 TTGCTGAAAATATAAAGCGAATCAC 57.031 32.000 0.00 0.00 38.53 3.06
210 211 7.082700 TGCTGAAAATATAAAGCGAATCACA 57.917 32.000 0.00 0.00 38.53 3.58
211 212 7.706159 TGCTGAAAATATAAAGCGAATCACAT 58.294 30.769 0.00 0.00 38.53 3.21
212 213 8.835439 TGCTGAAAATATAAAGCGAATCACATA 58.165 29.630 0.00 0.00 38.53 2.29
213 214 9.831737 GCTGAAAATATAAAGCGAATCACATAT 57.168 29.630 0.00 0.00 0.00 1.78
227 228 9.929722 GCGAATCACATATTAAAAAGTACATCA 57.070 29.630 0.00 0.00 0.00 3.07
241 242 7.972832 AAAGTACATCAAGATTACGAAACCA 57.027 32.000 0.00 0.00 0.00 3.67
242 243 8.561738 AAAGTACATCAAGATTACGAAACCAT 57.438 30.769 0.00 0.00 0.00 3.55
243 244 7.772332 AGTACATCAAGATTACGAAACCATC 57.228 36.000 0.00 0.00 0.00 3.51
259 260 4.882671 ACCATCGATCAAACACTATTGC 57.117 40.909 0.00 0.00 0.00 3.56
260 261 3.627577 ACCATCGATCAAACACTATTGCC 59.372 43.478 0.00 0.00 0.00 4.52
261 262 3.303329 CCATCGATCAAACACTATTGCCG 60.303 47.826 0.00 0.00 0.00 5.69
262 263 1.663643 TCGATCAAACACTATTGCCGC 59.336 47.619 0.00 0.00 0.00 6.53
263 264 1.268032 CGATCAAACACTATTGCCGCC 60.268 52.381 0.00 0.00 0.00 6.13
264 265 1.742831 GATCAAACACTATTGCCGCCA 59.257 47.619 0.00 0.00 0.00 5.69
265 266 1.832883 TCAAACACTATTGCCGCCAT 58.167 45.000 0.00 0.00 0.00 4.40
266 267 2.992593 TCAAACACTATTGCCGCCATA 58.007 42.857 0.00 0.00 0.00 2.74
267 268 2.942376 TCAAACACTATTGCCGCCATAG 59.058 45.455 9.41 9.41 0.00 2.23
268 269 1.308998 AACACTATTGCCGCCATAGC 58.691 50.000 10.64 0.00 0.00 2.97
269 270 0.180171 ACACTATTGCCGCCATAGCA 59.820 50.000 10.64 0.00 39.83 3.49
304 305 2.739913 GCTACGCCAAAACACTACATCA 59.260 45.455 0.00 0.00 0.00 3.07
308 309 3.818210 ACGCCAAAACACTACATCAATGA 59.182 39.130 0.00 0.00 0.00 2.57
315 316 8.298854 CCAAAACACTACATCAATGATTTCTCA 58.701 33.333 0.00 0.00 35.41 3.27
320 321 7.173218 ACACTACATCAATGATTTCTCAAACGT 59.827 33.333 0.00 0.00 34.37 3.99
326 327 5.686841 TCAATGATTTCTCAAACGTTGCTTG 59.313 36.000 0.00 0.00 34.37 4.01
330 331 4.948608 TTTCTCAAACGTTGCTTGTACA 57.051 36.364 0.00 0.00 0.00 2.90
367 368 5.376854 AACAAATTTATTGCGCTGAGACT 57.623 34.783 9.73 0.00 0.00 3.24
368 369 4.726416 ACAAATTTATTGCGCTGAGACTG 58.274 39.130 9.73 0.00 0.00 3.51
373 374 1.897225 ATTGCGCTGAGACTGAGGCT 61.897 55.000 9.73 0.00 0.00 4.58
374 375 2.202730 GCGCTGAGACTGAGGCTC 60.203 66.667 8.77 8.77 0.00 4.70
386 387 2.680312 TGAGGCTCAGATACAGCAAC 57.320 50.000 14.43 0.00 38.77 4.17
399 400 2.727544 GCAACGAGCTTTGCCCAA 59.272 55.556 11.37 0.00 45.22 4.12
400 401 1.661509 GCAACGAGCTTTGCCCAAC 60.662 57.895 11.37 0.00 45.22 3.77
404 405 0.823356 ACGAGCTTTGCCCAACACAT 60.823 50.000 0.00 0.00 0.00 3.21
406 407 0.961019 GAGCTTTGCCCAACACATGA 59.039 50.000 0.00 0.00 0.00 3.07
407 408 1.547372 GAGCTTTGCCCAACACATGAT 59.453 47.619 0.00 0.00 0.00 2.45
408 409 1.972795 AGCTTTGCCCAACACATGATT 59.027 42.857 0.00 0.00 0.00 2.57
410 411 2.288948 GCTTTGCCCAACACATGATTCA 60.289 45.455 0.00 0.00 0.00 2.57
420 422 5.172205 CAACACATGATTCAATGGATGCAA 58.828 37.500 0.00 0.00 31.46 4.08
421 423 5.408880 ACACATGATTCAATGGATGCAAA 57.591 34.783 0.00 0.00 31.46 3.68
425 427 6.592220 CACATGATTCAATGGATGCAAAAGAA 59.408 34.615 0.00 0.00 31.46 2.52
427 429 7.333423 ACATGATTCAATGGATGCAAAAGAAAG 59.667 33.333 0.00 0.00 31.46 2.62
430 432 7.601130 TGATTCAATGGATGCAAAAGAAAGAAG 59.399 33.333 0.00 0.00 0.00 2.85
431 433 6.653526 TCAATGGATGCAAAAGAAAGAAGA 57.346 33.333 0.00 0.00 0.00 2.87
432 434 6.449698 TCAATGGATGCAAAAGAAAGAAGAC 58.550 36.000 0.00 0.00 0.00 3.01
433 435 4.853924 TGGATGCAAAAGAAAGAAGACC 57.146 40.909 0.00 0.00 0.00 3.85
435 437 4.520492 TGGATGCAAAAGAAAGAAGACCTC 59.480 41.667 0.00 0.00 0.00 3.85
437 439 3.804036 TGCAAAAGAAAGAAGACCTCGA 58.196 40.909 0.00 0.00 0.00 4.04
438 440 3.560068 TGCAAAAGAAAGAAGACCTCGAC 59.440 43.478 0.00 0.00 0.00 4.20
439 441 3.560068 GCAAAAGAAAGAAGACCTCGACA 59.440 43.478 0.00 0.00 0.00 4.35
443 445 1.619332 GAAAGAAGACCTCGACACCCT 59.381 52.381 0.00 0.00 0.00 4.34
448 450 3.258622 AGAAGACCTCGACACCCTAAAAG 59.741 47.826 0.00 0.00 0.00 2.27
452 454 4.286291 AGACCTCGACACCCTAAAAGATTT 59.714 41.667 0.00 0.00 0.00 2.17
453 455 4.324267 ACCTCGACACCCTAAAAGATTTG 58.676 43.478 0.00 0.00 0.00 2.32
455 457 5.001232 CCTCGACACCCTAAAAGATTTGAA 58.999 41.667 0.00 0.00 0.00 2.69
456 458 5.648092 CCTCGACACCCTAAAAGATTTGAAT 59.352 40.000 0.00 0.00 0.00 2.57
457 459 6.403636 CCTCGACACCCTAAAAGATTTGAATG 60.404 42.308 0.00 0.00 0.00 2.67
458 460 6.001460 TCGACACCCTAAAAGATTTGAATGT 58.999 36.000 0.00 0.00 0.00 2.71
459 461 6.072728 TCGACACCCTAAAAGATTTGAATGTG 60.073 38.462 0.00 0.00 0.00 3.21
460 462 6.293955 CGACACCCTAAAAGATTTGAATGTGT 60.294 38.462 0.00 0.00 36.07 3.72
501 503 8.940397 AAGATGTCTCTTTTGGATTTTAAGGA 57.060 30.769 0.00 0.00 38.63 3.36
502 504 9.539194 AAGATGTCTCTTTTGGATTTTAAGGAT 57.461 29.630 0.00 0.00 38.63 3.24
505 507 9.933723 ATGTCTCTTTTGGATTTTAAGGATTTG 57.066 29.630 0.00 0.00 0.00 2.32
510 512 8.865090 TCTTTTGGATTTTAAGGATTTGTAGCA 58.135 29.630 0.00 0.00 0.00 3.49
512 514 7.775053 TTGGATTTTAAGGATTTGTAGCACT 57.225 32.000 0.00 0.00 0.00 4.40
513 515 8.871629 TTGGATTTTAAGGATTTGTAGCACTA 57.128 30.769 0.00 0.00 0.00 2.74
514 516 8.276252 TGGATTTTAAGGATTTGTAGCACTAC 57.724 34.615 0.70 0.70 36.63 2.73
543 1022 6.337356 TGTTGGCCTTTTGTCTTTTCTAAAG 58.663 36.000 3.32 0.00 32.82 1.85
569 1048 3.375782 AAGAAACACTGCAAGCAATCC 57.624 42.857 0.00 0.00 37.60 3.01
575 1054 1.400846 CACTGCAAGCAATCCAGCTAG 59.599 52.381 0.00 0.00 45.89 3.42
579 1058 1.601430 GCAAGCAATCCAGCTAGTAGC 59.399 52.381 14.62 14.62 45.89 3.58
595 1082 4.521062 GCGCATCAGCCGACCTCT 62.521 66.667 0.30 0.00 37.52 3.69
609 1096 4.056125 CTCTGGCGCCACGTGAGA 62.056 66.667 30.60 22.81 0.00 3.27
635 1133 3.371168 CAAAACCACATGACTTTGACCG 58.629 45.455 0.00 0.00 31.77 4.79
667 1165 0.169894 GACTGACGGACCGACCTTAC 59.830 60.000 23.38 3.53 36.31 2.34
674 1172 1.114627 GGACCGACCTTACCCGTAAT 58.885 55.000 0.00 0.00 35.41 1.89
684 1182 3.496160 CCTTACCCGTAATGATTCCAGGG 60.496 52.174 9.91 9.91 44.17 4.45
754 1260 2.740055 GTCACTGCTGGCGAGTGG 60.740 66.667 17.80 0.00 41.11 4.00
755 1261 4.687215 TCACTGCTGGCGAGTGGC 62.687 66.667 17.80 0.00 41.11 5.01
839 1350 5.471257 GGCAATACCGGAATAAACAAAACA 58.529 37.500 9.46 0.00 0.00 2.83
840 1351 5.927115 GGCAATACCGGAATAAACAAAACAA 59.073 36.000 9.46 0.00 0.00 2.83
841 1352 6.424207 GGCAATACCGGAATAAACAAAACAAA 59.576 34.615 9.46 0.00 0.00 2.83
842 1353 7.041984 GGCAATACCGGAATAAACAAAACAAAA 60.042 33.333 9.46 0.00 0.00 2.44
843 1354 8.336080 GCAATACCGGAATAAACAAAACAAAAA 58.664 29.630 9.46 0.00 0.00 1.94
844 1355 9.639636 CAATACCGGAATAAACAAAACAAAAAC 57.360 29.630 9.46 0.00 0.00 2.43
925 1469 2.047179 GGTCGGTGCCCTCTGTTC 60.047 66.667 0.00 0.00 0.00 3.18
929 1473 2.753029 GGTGCCCTCTGTTCTGCT 59.247 61.111 0.00 0.00 0.00 4.24
1023 1580 1.885887 CAAACAACCATCACCACCGAT 59.114 47.619 0.00 0.00 0.00 4.18
1090 1740 2.784596 CGCAAGGGCACACATACG 59.215 61.111 0.00 0.00 41.24 3.06
1094 1757 1.737838 CAAGGGCACACATACGACAT 58.262 50.000 0.00 0.00 0.00 3.06
1122 1789 1.511305 GTCTCGGCGTCAATGGAGA 59.489 57.895 6.85 0.00 33.40 3.71
1305 2005 4.760047 TCTTCCCGGCGAGCAAGC 62.760 66.667 9.30 0.00 0.00 4.01
1356 2056 3.234630 CTCGGGTGCGGGTTCTTCA 62.235 63.158 0.00 0.00 0.00 3.02
1772 2490 2.348998 CTGCTCTGGGACGGCTTT 59.651 61.111 0.00 0.00 32.53 3.51
1834 2558 0.666577 CTCCCGGTCGACAACACTTC 60.667 60.000 18.91 0.00 0.00 3.01
1904 2629 3.880490 CCCTCTGCTACTAGTGTAGACTG 59.120 52.174 5.39 2.91 46.76 3.51
1907 2632 5.163703 CCTCTGCTACTAGTGTAGACTGTTG 60.164 48.000 5.39 1.99 46.76 3.33
1913 2638 1.329256 AGTGTAGACTGTTGGCGAGT 58.671 50.000 0.00 0.00 0.00 4.18
1926 2654 4.519350 TGTTGGCGAGTATACCAGATAGAG 59.481 45.833 0.00 0.00 37.24 2.43
1940 2668 2.232452 AGATAGAGTGGTGTCAGTGTGC 59.768 50.000 0.00 0.00 0.00 4.57
1941 2669 0.313987 TAGAGTGGTGTCAGTGTGCG 59.686 55.000 0.00 0.00 0.00 5.34
1942 2670 1.227263 GAGTGGTGTCAGTGTGCGT 60.227 57.895 0.00 0.00 0.00 5.24
1943 2671 1.490693 GAGTGGTGTCAGTGTGCGTG 61.491 60.000 0.00 0.00 0.00 5.34
1944 2672 1.813753 GTGGTGTCAGTGTGCGTGT 60.814 57.895 0.00 0.00 0.00 4.49
1945 2673 1.520564 TGGTGTCAGTGTGCGTGTC 60.521 57.895 0.00 0.00 0.00 3.67
1946 2674 1.520564 GGTGTCAGTGTGCGTGTCA 60.521 57.895 0.00 0.00 0.00 3.58
1947 2675 0.880278 GGTGTCAGTGTGCGTGTCAT 60.880 55.000 0.00 0.00 0.00 3.06
1948 2676 0.508641 GTGTCAGTGTGCGTGTCATC 59.491 55.000 0.00 0.00 0.00 2.92
1949 2677 0.389025 TGTCAGTGTGCGTGTCATCT 59.611 50.000 0.00 0.00 0.00 2.90
1950 2678 1.063806 GTCAGTGTGCGTGTCATCTC 58.936 55.000 0.00 0.00 0.00 2.75
1951 2679 0.673437 TCAGTGTGCGTGTCATCTCA 59.327 50.000 0.00 0.00 0.00 3.27
1952 2680 1.068434 TCAGTGTGCGTGTCATCTCAA 59.932 47.619 0.00 0.00 0.00 3.02
1953 2681 2.071540 CAGTGTGCGTGTCATCTCAAT 58.928 47.619 0.00 0.00 0.00 2.57
1954 2682 2.093310 CAGTGTGCGTGTCATCTCAATC 59.907 50.000 0.00 0.00 0.00 2.67
1955 2683 2.068519 GTGTGCGTGTCATCTCAATCA 58.931 47.619 0.00 0.00 0.00 2.57
1956 2684 2.093310 GTGTGCGTGTCATCTCAATCAG 59.907 50.000 0.00 0.00 0.00 2.90
1957 2685 1.061711 GTGCGTGTCATCTCAATCAGC 59.938 52.381 0.00 0.00 0.00 4.26
1958 2686 1.338011 TGCGTGTCATCTCAATCAGCA 60.338 47.619 0.00 0.00 0.00 4.41
1959 2687 1.326852 GCGTGTCATCTCAATCAGCAG 59.673 52.381 0.00 0.00 0.00 4.24
1960 2688 2.614779 CGTGTCATCTCAATCAGCAGT 58.385 47.619 0.00 0.00 0.00 4.40
1961 2689 2.602211 CGTGTCATCTCAATCAGCAGTC 59.398 50.000 0.00 0.00 0.00 3.51
1962 2690 3.593096 GTGTCATCTCAATCAGCAGTCA 58.407 45.455 0.00 0.00 0.00 3.41
1963 2691 3.617706 GTGTCATCTCAATCAGCAGTCAG 59.382 47.826 0.00 0.00 0.00 3.51
1964 2692 2.608546 GTCATCTCAATCAGCAGTCAGC 59.391 50.000 0.00 0.00 46.19 4.26
2055 2820 2.084546 GCATAAATAGGCACCCGATCC 58.915 52.381 0.00 0.00 32.47 3.36
2089 2854 4.246458 GTGTTGAACCATACTCCTCTGTC 58.754 47.826 0.00 0.00 0.00 3.51
2090 2855 3.260884 TGTTGAACCATACTCCTCTGTCC 59.739 47.826 0.00 0.00 0.00 4.02
2091 2856 3.474798 TGAACCATACTCCTCTGTCCT 57.525 47.619 0.00 0.00 0.00 3.85
2092 2857 3.791320 TGAACCATACTCCTCTGTCCTT 58.209 45.455 0.00 0.00 0.00 3.36
2093 2858 3.769844 TGAACCATACTCCTCTGTCCTTC 59.230 47.826 0.00 0.00 0.00 3.46
2094 2859 2.379972 ACCATACTCCTCTGTCCTTCG 58.620 52.381 0.00 0.00 0.00 3.79
2095 2860 1.067821 CCATACTCCTCTGTCCTTCGC 59.932 57.143 0.00 0.00 0.00 4.70
2096 2861 1.751351 CATACTCCTCTGTCCTTCGCA 59.249 52.381 0.00 0.00 0.00 5.10
2097 2862 1.919240 TACTCCTCTGTCCTTCGCAA 58.081 50.000 0.00 0.00 0.00 4.85
2098 2863 1.048601 ACTCCTCTGTCCTTCGCAAA 58.951 50.000 0.00 0.00 0.00 3.68
2099 2864 1.416401 ACTCCTCTGTCCTTCGCAAAA 59.584 47.619 0.00 0.00 0.00 2.44
2100 2865 2.158813 ACTCCTCTGTCCTTCGCAAAAA 60.159 45.455 0.00 0.00 0.00 1.94
2135 2900 3.201290 CCATACTCCTCTGTCATGTTGC 58.799 50.000 0.00 0.00 0.00 4.17
2142 2907 2.941064 CCTCTGTCATGTTGCATGTAGG 59.059 50.000 8.68 8.01 0.00 3.18
2164 2929 5.305386 AGGCAAATCCTATTTTGGGCTTATC 59.695 40.000 0.00 0.00 45.41 1.75
2170 2935 5.826643 TCCTATTTTGGGCTTATCTGTTGT 58.173 37.500 0.00 0.00 0.00 3.32
2173 2938 7.891183 TCCTATTTTGGGCTTATCTGTTGTAAA 59.109 33.333 0.00 0.00 0.00 2.01
2243 3018 6.597562 TGTTGGAACTCTAATGGTGTTTAGT 58.402 36.000 0.00 0.00 32.64 2.24
2317 3092 4.717280 CCCTAGTGTTGAGATCCTAGGTTT 59.283 45.833 9.08 0.00 43.29 3.27
2319 3094 4.559862 AGTGTTGAGATCCTAGGTTTGG 57.440 45.455 9.08 0.00 0.00 3.28
2322 3097 3.010420 GTTGAGATCCTAGGTTTGGCAC 58.990 50.000 9.08 0.00 0.00 5.01
2360 3135 1.203523 GGAGTCACTCGCAACTCTCAT 59.796 52.381 0.00 0.00 41.34 2.90
2361 3136 2.257894 GAGTCACTCGCAACTCTCATG 58.742 52.381 0.00 0.00 39.06 3.07
2414 3270 4.930405 TCATTGGCAAGCAATGTTAACATG 59.070 37.500 21.46 15.57 40.05 3.21
2417 3273 3.825585 TGGCAAGCAATGTTAACATGAGA 59.174 39.130 21.46 0.00 36.56 3.27
2530 3387 5.437289 CACCTCTAACATTTGTGCAAAGA 57.563 39.130 3.70 0.00 33.32 2.52
2531 3388 5.215160 CACCTCTAACATTTGTGCAAAGAC 58.785 41.667 3.70 0.00 33.32 3.01
2532 3389 4.887071 ACCTCTAACATTTGTGCAAAGACA 59.113 37.500 3.70 0.00 33.32 3.41
2533 3390 5.359576 ACCTCTAACATTTGTGCAAAGACAA 59.640 36.000 3.70 0.00 33.96 3.18
2546 3403 3.740764 GCAAAGACAAAGCCAATGGTGAA 60.741 43.478 0.00 0.00 0.00 3.18
2580 3437 0.469144 AAACAGAAATGGCCGGGTGT 60.469 50.000 2.18 0.00 0.00 4.16
2584 3441 0.322187 AGAAATGGCCGGGTGTACAC 60.322 55.000 18.01 18.01 0.00 2.90
2596 3453 1.078778 TGTACACAATGCGGCCGAT 60.079 52.632 33.48 16.99 0.00 4.18
2655 3512 8.992835 TGAGATAGATTCGATGGACAATAATG 57.007 34.615 0.00 0.00 0.00 1.90
2658 3515 9.784531 AGATAGATTCGATGGACAATAATGTTT 57.215 29.630 0.00 0.00 40.74 2.83
2848 7257 7.272244 CCCTAAATTTAATCCCAACCATTCAC 58.728 38.462 0.00 0.00 0.00 3.18
2907 7316 8.049117 AGAATTACTCTTCCATGTCTATTTGCA 58.951 33.333 0.00 0.00 0.00 4.08
2946 7355 1.662876 CCAACGTCGTGAAGCAAATGG 60.663 52.381 0.00 0.00 0.00 3.16
3004 7413 4.796231 ATGTCGACGGCCACGAGC 62.796 66.667 19.79 15.07 44.60 5.03
3019 7428 4.202070 GCCACGAGCTCTTCTCTTAGTTAT 60.202 45.833 12.85 0.00 39.70 1.89
3020 7429 5.277825 CCACGAGCTCTTCTCTTAGTTATG 58.722 45.833 12.85 0.00 39.70 1.90
3038 7447 6.198639 AGTTATGTGGACCATCTCTACTCTT 58.801 40.000 0.00 0.00 34.86 2.85
3065 7474 9.719355 TTTGAATGTAATTGTAGACTAGCAAGA 57.281 29.630 0.00 0.00 36.07 3.02
3066 7475 9.890629 TTGAATGTAATTGTAGACTAGCAAGAT 57.109 29.630 0.00 0.66 36.07 2.40
3067 7476 9.317936 TGAATGTAATTGTAGACTAGCAAGATG 57.682 33.333 0.00 0.00 36.07 2.90
3068 7477 7.721286 ATGTAATTGTAGACTAGCAAGATGC 57.279 36.000 0.00 0.00 45.46 3.91
3069 7478 6.049149 TGTAATTGTAGACTAGCAAGATGCC 58.951 40.000 0.00 0.00 46.52 4.40
3070 7479 3.543680 TTGTAGACTAGCAAGATGCCC 57.456 47.619 0.00 0.00 46.52 5.36
3071 7480 2.466846 TGTAGACTAGCAAGATGCCCA 58.533 47.619 0.00 0.00 46.52 5.36
3072 7481 3.041211 TGTAGACTAGCAAGATGCCCAT 58.959 45.455 0.00 0.00 46.52 4.00
3073 7482 2.634815 AGACTAGCAAGATGCCCATG 57.365 50.000 0.00 0.00 46.52 3.66
3074 7483 0.950116 GACTAGCAAGATGCCCATGC 59.050 55.000 0.00 0.00 46.52 4.06
3075 7484 0.816825 ACTAGCAAGATGCCCATGCG 60.817 55.000 0.00 0.00 46.52 4.73
3076 7485 0.816825 CTAGCAAGATGCCCATGCGT 60.817 55.000 0.00 0.00 46.52 5.24
3077 7486 0.394216 TAGCAAGATGCCCATGCGTT 60.394 50.000 0.00 0.00 46.52 4.84
3078 7487 1.517694 GCAAGATGCCCATGCGTTG 60.518 57.895 0.00 0.00 41.78 4.10
3079 7488 1.517694 CAAGATGCCCATGCGTTGC 60.518 57.895 0.00 0.00 41.78 4.17
3080 7489 1.978080 AAGATGCCCATGCGTTGCA 60.978 52.632 2.57 2.57 44.86 4.08
3081 7490 2.202650 GATGCCCATGCGTTGCAC 60.203 61.111 2.13 0.00 43.04 4.57
3082 7491 4.118995 ATGCCCATGCGTTGCACG 62.119 61.111 2.13 4.61 43.04 5.34
3085 7494 3.361158 CCCATGCGTTGCACGGAA 61.361 61.111 5.32 0.00 45.44 4.30
3086 7495 2.126888 CCATGCGTTGCACGGAAC 60.127 61.111 0.00 0.00 45.44 3.62
3087 7496 2.636462 CATGCGTTGCACGGAACA 59.364 55.556 6.93 0.00 46.78 3.18
3088 7497 1.209898 CATGCGTTGCACGGAACAT 59.790 52.632 6.93 2.04 46.78 2.71
3089 7498 0.794229 CATGCGTTGCACGGAACATC 60.794 55.000 6.93 0.00 46.78 3.06
3090 7499 1.233950 ATGCGTTGCACGGAACATCA 61.234 50.000 6.93 0.00 46.78 3.07
3091 7500 1.281353 GCGTTGCACGGAACATCAA 59.719 52.632 10.02 0.00 42.82 2.57
3092 7501 0.725784 GCGTTGCACGGAACATCAAG 60.726 55.000 10.02 0.00 42.82 3.02
3093 7502 0.865111 CGTTGCACGGAACATCAAGA 59.135 50.000 2.31 0.00 38.08 3.02
3094 7503 1.464608 CGTTGCACGGAACATCAAGAT 59.535 47.619 2.31 0.00 38.08 2.40
3095 7504 2.725759 CGTTGCACGGAACATCAAGATG 60.726 50.000 8.45 8.45 40.19 2.90
3096 7505 0.804364 TGCACGGAACATCAAGATGC 59.196 50.000 9.85 0.00 42.39 3.91
3097 7506 0.804364 GCACGGAACATCAAGATGCA 59.196 50.000 9.85 0.00 42.39 3.96
3098 7507 1.402968 GCACGGAACATCAAGATGCAT 59.597 47.619 9.85 0.00 42.39 3.96
3099 7508 2.159338 GCACGGAACATCAAGATGCATT 60.159 45.455 9.85 0.00 42.39 3.56
3100 7509 3.674138 GCACGGAACATCAAGATGCATTT 60.674 43.478 9.85 0.00 42.39 2.32
3101 7510 3.855379 CACGGAACATCAAGATGCATTTG 59.145 43.478 9.85 7.88 42.39 2.32
3102 7511 3.507233 ACGGAACATCAAGATGCATTTGT 59.493 39.130 9.85 0.00 42.39 2.83
3103 7512 4.699735 ACGGAACATCAAGATGCATTTGTA 59.300 37.500 9.85 0.00 42.39 2.41
3104 7513 5.357878 ACGGAACATCAAGATGCATTTGTAT 59.642 36.000 9.85 1.80 42.39 2.29
3105 7514 5.684184 CGGAACATCAAGATGCATTTGTATG 59.316 40.000 9.85 13.57 42.39 2.39
3106 7515 6.458615 CGGAACATCAAGATGCATTTGTATGA 60.459 38.462 22.17 15.31 42.39 2.15
3107 7516 6.916387 GGAACATCAAGATGCATTTGTATGAG 59.084 38.462 22.17 12.56 42.39 2.90
3108 7517 7.400599 AACATCAAGATGCATTTGTATGAGT 57.599 32.000 22.17 12.92 42.39 3.41
3109 7518 8.510243 AACATCAAGATGCATTTGTATGAGTA 57.490 30.769 22.17 8.59 42.39 2.59
3110 7519 8.151141 ACATCAAGATGCATTTGTATGAGTAG 57.849 34.615 22.17 12.72 42.39 2.57
3111 7520 7.772292 ACATCAAGATGCATTTGTATGAGTAGT 59.228 33.333 22.17 13.08 42.39 2.73
3112 7521 8.618677 CATCAAGATGCATTTGTATGAGTAGTT 58.381 33.333 0.00 0.00 33.37 2.24
3113 7522 8.565896 TCAAGATGCATTTGTATGAGTAGTTT 57.434 30.769 0.00 0.00 33.37 2.66
3114 7523 9.665719 TCAAGATGCATTTGTATGAGTAGTTTA 57.334 29.630 0.00 0.00 33.37 2.01
3120 7529 9.448438 TGCATTTGTATGAGTAGTTTATCTTGT 57.552 29.630 0.00 0.00 33.37 3.16
3121 7530 9.708222 GCATTTGTATGAGTAGTTTATCTTGTG 57.292 33.333 0.00 0.00 33.37 3.33
3123 7532 8.786826 TTTGTATGAGTAGTTTATCTTGTGGG 57.213 34.615 0.00 0.00 0.00 4.61
3124 7533 7.727578 TGTATGAGTAGTTTATCTTGTGGGA 57.272 36.000 0.00 0.00 0.00 4.37
3125 7534 7.782049 TGTATGAGTAGTTTATCTTGTGGGAG 58.218 38.462 0.00 0.00 0.00 4.30
3126 7535 7.618117 TGTATGAGTAGTTTATCTTGTGGGAGA 59.382 37.037 0.00 0.00 0.00 3.71
3127 7536 6.928348 TGAGTAGTTTATCTTGTGGGAGAA 57.072 37.500 0.00 0.00 0.00 2.87
3128 7537 7.311092 TGAGTAGTTTATCTTGTGGGAGAAA 57.689 36.000 0.00 0.00 0.00 2.52
3129 7538 7.741785 TGAGTAGTTTATCTTGTGGGAGAAAA 58.258 34.615 0.00 0.00 29.99 2.29
3130 7539 7.878127 TGAGTAGTTTATCTTGTGGGAGAAAAG 59.122 37.037 0.00 0.00 29.99 2.27
3131 7540 7.168905 AGTAGTTTATCTTGTGGGAGAAAAGG 58.831 38.462 0.00 0.00 29.99 3.11
3132 7541 6.200878 AGTTTATCTTGTGGGAGAAAAGGA 57.799 37.500 0.00 0.00 29.99 3.36
3133 7542 6.794534 AGTTTATCTTGTGGGAGAAAAGGAT 58.205 36.000 0.00 0.00 29.99 3.24
3134 7543 6.660949 AGTTTATCTTGTGGGAGAAAAGGATG 59.339 38.462 0.00 0.00 29.99 3.51
3135 7544 4.934797 ATCTTGTGGGAGAAAAGGATGA 57.065 40.909 0.00 0.00 0.00 2.92
3136 7545 4.722526 TCTTGTGGGAGAAAAGGATGAA 57.277 40.909 0.00 0.00 0.00 2.57
3137 7546 4.398319 TCTTGTGGGAGAAAAGGATGAAC 58.602 43.478 0.00 0.00 0.00 3.18
3138 7547 2.778299 TGTGGGAGAAAAGGATGAACG 58.222 47.619 0.00 0.00 0.00 3.95
3139 7548 2.370519 TGTGGGAGAAAAGGATGAACGA 59.629 45.455 0.00 0.00 0.00 3.85
3140 7549 3.003480 GTGGGAGAAAAGGATGAACGAG 58.997 50.000 0.00 0.00 0.00 4.18
3141 7550 2.027192 TGGGAGAAAAGGATGAACGAGG 60.027 50.000 0.00 0.00 0.00 4.63
3142 7551 2.236395 GGGAGAAAAGGATGAACGAGGA 59.764 50.000 0.00 0.00 0.00 3.71
3143 7552 3.307480 GGGAGAAAAGGATGAACGAGGAA 60.307 47.826 0.00 0.00 0.00 3.36
3144 7553 4.324267 GGAGAAAAGGATGAACGAGGAAA 58.676 43.478 0.00 0.00 0.00 3.13
3145 7554 4.944317 GGAGAAAAGGATGAACGAGGAAAT 59.056 41.667 0.00 0.00 0.00 2.17
3146 7555 5.163713 GGAGAAAAGGATGAACGAGGAAATG 60.164 44.000 0.00 0.00 0.00 2.32
3147 7556 4.156739 AGAAAAGGATGAACGAGGAAATGC 59.843 41.667 0.00 0.00 0.00 3.56
3148 7557 2.044123 AGGATGAACGAGGAAATGCC 57.956 50.000 0.00 0.00 0.00 4.40
3162 7571 4.912214 GGAAATGCCTTATTTGCAAATGC 58.088 39.130 30.43 24.98 43.98 3.56
3163 7572 4.494526 GGAAATGCCTTATTTGCAAATGCG 60.495 41.667 30.43 20.80 43.98 4.73
3164 7573 2.007360 TGCCTTATTTGCAAATGCGG 57.993 45.000 30.43 27.56 45.83 5.69
3165 7574 1.547820 TGCCTTATTTGCAAATGCGGA 59.452 42.857 30.24 19.10 45.83 5.54
3166 7575 2.195922 GCCTTATTTGCAAATGCGGAG 58.804 47.619 30.24 22.41 45.83 4.63
3167 7576 2.159254 GCCTTATTTGCAAATGCGGAGA 60.159 45.455 30.24 13.64 45.83 3.71
3168 7577 3.699067 CCTTATTTGCAAATGCGGAGAG 58.301 45.455 30.43 17.83 45.83 3.20
3169 7578 3.489738 CCTTATTTGCAAATGCGGAGAGG 60.490 47.826 30.43 21.53 45.83 3.69
3170 7579 0.819582 ATTTGCAAATGCGGAGAGGG 59.180 50.000 23.54 0.00 45.83 4.30
3171 7580 1.250154 TTTGCAAATGCGGAGAGGGG 61.250 55.000 8.05 0.00 45.83 4.79
3172 7581 2.044946 GCAAATGCGGAGAGGGGT 60.045 61.111 0.00 0.00 0.00 4.95
3173 7582 2.409870 GCAAATGCGGAGAGGGGTG 61.410 63.158 0.00 0.00 0.00 4.61
3174 7583 2.044946 AAATGCGGAGAGGGGTGC 60.045 61.111 0.00 0.00 0.00 5.01
3175 7584 3.976701 AAATGCGGAGAGGGGTGCG 62.977 63.158 0.00 0.00 0.00 5.34
3180 7589 2.446036 GGAGAGGGGTGCGGGTAT 60.446 66.667 0.00 0.00 0.00 2.73
3181 7590 2.508751 GGAGAGGGGTGCGGGTATC 61.509 68.421 0.00 0.00 0.00 2.24
3182 7591 1.457831 GAGAGGGGTGCGGGTATCT 60.458 63.158 0.00 0.00 0.00 1.98
3183 7592 1.003051 AGAGGGGTGCGGGTATCTT 59.997 57.895 0.00 0.00 0.00 2.40
3184 7593 0.620700 AGAGGGGTGCGGGTATCTTT 60.621 55.000 0.00 0.00 0.00 2.52
3185 7594 0.255033 GAGGGGTGCGGGTATCTTTT 59.745 55.000 0.00 0.00 0.00 2.27
3186 7595 0.702316 AGGGGTGCGGGTATCTTTTT 59.298 50.000 0.00 0.00 0.00 1.94
3187 7596 0.815095 GGGGTGCGGGTATCTTTTTG 59.185 55.000 0.00 0.00 0.00 2.44
3188 7597 0.172578 GGGTGCGGGTATCTTTTTGC 59.827 55.000 0.00 0.00 0.00 3.68
3189 7598 0.885196 GGTGCGGGTATCTTTTTGCA 59.115 50.000 0.00 0.00 0.00 4.08
3190 7599 1.271102 GGTGCGGGTATCTTTTTGCAA 59.729 47.619 0.00 0.00 33.67 4.08
3191 7600 2.288518 GGTGCGGGTATCTTTTTGCAAA 60.289 45.455 8.05 8.05 33.67 3.68
3192 7601 3.385577 GTGCGGGTATCTTTTTGCAAAA 58.614 40.909 20.46 20.46 33.67 2.44
3193 7602 3.993736 GTGCGGGTATCTTTTTGCAAAAT 59.006 39.130 24.39 12.94 33.67 1.82
3194 7603 4.450757 GTGCGGGTATCTTTTTGCAAAATT 59.549 37.500 24.39 14.72 33.67 1.82
3195 7604 4.450419 TGCGGGTATCTTTTTGCAAAATTG 59.550 37.500 24.39 19.07 0.00 2.32
3210 7619 5.761818 CAAAATTGCCATAGTTTCGTTCC 57.238 39.130 0.00 0.00 0.00 3.62
3211 7620 5.469479 CAAAATTGCCATAGTTTCGTTCCT 58.531 37.500 0.00 0.00 0.00 3.36
3212 7621 6.616947 CAAAATTGCCATAGTTTCGTTCCTA 58.383 36.000 0.00 0.00 0.00 2.94
3213 7622 7.257722 CAAAATTGCCATAGTTTCGTTCCTAT 58.742 34.615 0.00 0.00 0.00 2.57
3214 7623 7.404671 AAATTGCCATAGTTTCGTTCCTATT 57.595 32.000 0.00 0.00 0.00 1.73
3215 7624 6.619801 ATTGCCATAGTTTCGTTCCTATTC 57.380 37.500 0.00 0.00 0.00 1.75
3216 7625 4.116961 TGCCATAGTTTCGTTCCTATTCG 58.883 43.478 0.00 0.00 0.00 3.34
3217 7626 4.117685 GCCATAGTTTCGTTCCTATTCGT 58.882 43.478 0.00 0.00 0.00 3.85
3218 7627 4.208666 GCCATAGTTTCGTTCCTATTCGTC 59.791 45.833 0.00 0.00 0.00 4.20
3219 7628 4.440103 CCATAGTTTCGTTCCTATTCGTCG 59.560 45.833 0.00 0.00 0.00 5.12
3220 7629 2.872370 AGTTTCGTTCCTATTCGTCGG 58.128 47.619 0.00 0.00 0.00 4.79
3221 7630 2.489329 AGTTTCGTTCCTATTCGTCGGA 59.511 45.455 0.00 0.00 0.00 4.55
3222 7631 3.129988 AGTTTCGTTCCTATTCGTCGGAT 59.870 43.478 0.00 0.00 0.00 4.18
3223 7632 4.336433 AGTTTCGTTCCTATTCGTCGGATA 59.664 41.667 0.00 0.00 0.00 2.59
3224 7633 5.009410 AGTTTCGTTCCTATTCGTCGGATAT 59.991 40.000 0.00 0.00 0.00 1.63
3225 7634 6.205464 AGTTTCGTTCCTATTCGTCGGATATA 59.795 38.462 0.00 0.00 0.00 0.86
3226 7635 6.558771 TTCGTTCCTATTCGTCGGATATAA 57.441 37.500 0.00 0.00 0.00 0.98
3227 7636 6.558771 TCGTTCCTATTCGTCGGATATAAA 57.441 37.500 0.00 0.00 0.00 1.40
3228 7637 7.149569 TCGTTCCTATTCGTCGGATATAAAT 57.850 36.000 0.00 0.00 0.00 1.40
3229 7638 7.246311 TCGTTCCTATTCGTCGGATATAAATC 58.754 38.462 0.00 0.00 0.00 2.17
3230 7639 6.194142 CGTTCCTATTCGTCGGATATAAATCG 59.806 42.308 0.00 0.00 32.44 3.34
3231 7640 6.127810 TCCTATTCGTCGGATATAAATCGG 57.872 41.667 0.00 0.00 34.58 4.18
3232 7641 5.882000 TCCTATTCGTCGGATATAAATCGGA 59.118 40.000 0.00 0.00 38.66 4.55
3233 7642 6.544931 TCCTATTCGTCGGATATAAATCGGAT 59.455 38.462 0.00 0.00 41.72 4.18
3234 7643 6.637254 CCTATTCGTCGGATATAAATCGGATG 59.363 42.308 0.00 8.19 44.16 3.51
3235 7644 4.365899 TCGTCGGATATAAATCGGATGG 57.634 45.455 12.44 4.16 43.52 3.51
3236 7645 2.858344 CGTCGGATATAAATCGGATGGC 59.142 50.000 0.00 0.00 41.72 4.40
3237 7646 3.195661 GTCGGATATAAATCGGATGGCC 58.804 50.000 0.00 0.00 41.72 5.36
3238 7647 3.104512 TCGGATATAAATCGGATGGCCT 58.895 45.455 3.32 0.00 36.76 5.19
3239 7648 4.098960 GTCGGATATAAATCGGATGGCCTA 59.901 45.833 3.32 0.00 41.72 3.93
3240 7649 4.899457 TCGGATATAAATCGGATGGCCTAT 59.101 41.667 3.32 0.00 36.76 2.57
3241 7650 6.015688 GTCGGATATAAATCGGATGGCCTATA 60.016 42.308 3.32 0.00 41.72 1.31
3242 7651 6.724441 TCGGATATAAATCGGATGGCCTATAT 59.276 38.462 3.32 0.12 36.76 0.86
3243 7652 7.234782 TCGGATATAAATCGGATGGCCTATATT 59.765 37.037 3.32 0.00 36.76 1.28
3244 7653 7.331934 CGGATATAAATCGGATGGCCTATATTG 59.668 40.741 3.32 0.00 35.09 1.90
3245 7654 7.119846 GGATATAAATCGGATGGCCTATATTGC 59.880 40.741 3.32 0.00 32.44 3.56
3246 7655 2.315925 ATCGGATGGCCTATATTGCG 57.684 50.000 3.32 0.91 0.00 4.85
3247 7656 0.249120 TCGGATGGCCTATATTGCGG 59.751 55.000 3.32 0.00 0.00 5.69
3248 7657 0.744414 CGGATGGCCTATATTGCGGG 60.744 60.000 3.32 0.00 0.00 6.13
3249 7658 0.618458 GGATGGCCTATATTGCGGGA 59.382 55.000 3.32 0.00 0.00 5.14
3250 7659 1.212935 GGATGGCCTATATTGCGGGAT 59.787 52.381 3.32 0.00 0.00 3.85
3251 7660 2.292267 GATGGCCTATATTGCGGGATG 58.708 52.381 3.32 0.00 0.00 3.51
3252 7661 0.327924 TGGCCTATATTGCGGGATGG 59.672 55.000 3.32 0.00 0.00 3.51
3253 7662 1.032114 GGCCTATATTGCGGGATGGC 61.032 60.000 0.00 0.00 38.28 4.40
3254 7663 0.322456 GCCTATATTGCGGGATGGCA 60.322 55.000 0.00 0.00 42.12 4.92
3255 7664 1.742761 CCTATATTGCGGGATGGCAG 58.257 55.000 0.00 0.00 44.94 4.85
3256 7665 1.679944 CCTATATTGCGGGATGGCAGG 60.680 57.143 0.00 0.00 44.94 4.85
3257 7666 1.278985 CTATATTGCGGGATGGCAGGA 59.721 52.381 0.00 0.00 44.94 3.86
3258 7667 0.478072 ATATTGCGGGATGGCAGGAA 59.522 50.000 0.00 0.00 44.94 3.36
3259 7668 0.465460 TATTGCGGGATGGCAGGAAC 60.465 55.000 0.00 0.00 44.94 3.62
3260 7669 2.497792 ATTGCGGGATGGCAGGAACA 62.498 55.000 0.00 0.00 44.94 3.18
3261 7670 3.134127 GCGGGATGGCAGGAACAC 61.134 66.667 0.00 0.00 0.00 3.32
3262 7671 2.438434 CGGGATGGCAGGAACACC 60.438 66.667 0.00 0.00 0.00 4.16
3263 7672 2.763215 GGGATGGCAGGAACACCA 59.237 61.111 0.00 0.00 41.01 4.17
3264 7673 1.678970 GGGATGGCAGGAACACCAC 60.679 63.158 0.00 0.00 39.60 4.16
3265 7674 1.678970 GGATGGCAGGAACACCACC 60.679 63.158 0.00 0.00 39.60 4.61
3266 7675 1.074775 GATGGCAGGAACACCACCA 59.925 57.895 0.00 0.00 39.60 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.992427 ACACATGATGAATCGATGATCCG 59.008 43.478 0.00 1.29 0.00 4.18
2 3 9.888878 AAAATAACACATGATGAATCGATGATC 57.111 29.630 0.00 4.69 0.00 2.92
12 13 8.962679 GGGGTTAAGTAAAATAACACATGATGA 58.037 33.333 0.00 0.00 38.20 2.92
13 14 8.744652 TGGGGTTAAGTAAAATAACACATGATG 58.255 33.333 0.00 0.00 38.20 3.07
14 15 8.745590 GTGGGGTTAAGTAAAATAACACATGAT 58.254 33.333 0.00 0.00 38.20 2.45
15 16 7.724506 TGTGGGGTTAAGTAAAATAACACATGA 59.275 33.333 0.00 0.00 38.20 3.07
16 17 7.887381 TGTGGGGTTAAGTAAAATAACACATG 58.113 34.615 0.00 0.00 38.20 3.21
17 18 8.361889 GTTGTGGGGTTAAGTAAAATAACACAT 58.638 33.333 0.00 0.00 38.20 3.21
18 19 7.201893 GGTTGTGGGGTTAAGTAAAATAACACA 60.202 37.037 0.00 0.00 38.20 3.72
19 20 7.147312 GGTTGTGGGGTTAAGTAAAATAACAC 58.853 38.462 0.00 0.00 36.21 3.32
20 21 6.267242 GGGTTGTGGGGTTAAGTAAAATAACA 59.733 38.462 0.00 0.00 35.44 2.41
21 22 6.494491 AGGGTTGTGGGGTTAAGTAAAATAAC 59.506 38.462 0.00 0.00 33.47 1.89
22 23 6.622361 AGGGTTGTGGGGTTAAGTAAAATAA 58.378 36.000 0.00 0.00 0.00 1.40
23 24 6.216854 AGGGTTGTGGGGTTAAGTAAAATA 57.783 37.500 0.00 0.00 0.00 1.40
24 25 5.082633 AGGGTTGTGGGGTTAAGTAAAAT 57.917 39.130 0.00 0.00 0.00 1.82
25 26 4.539596 AGGGTTGTGGGGTTAAGTAAAA 57.460 40.909 0.00 0.00 0.00 1.52
26 27 4.539596 AAGGGTTGTGGGGTTAAGTAAA 57.460 40.909 0.00 0.00 0.00 2.01
27 28 4.539596 AAAGGGTTGTGGGGTTAAGTAA 57.460 40.909 0.00 0.00 0.00 2.24
28 29 4.539596 AAAAGGGTTGTGGGGTTAAGTA 57.460 40.909 0.00 0.00 0.00 2.24
29 30 3.408157 AAAAGGGTTGTGGGGTTAAGT 57.592 42.857 0.00 0.00 0.00 2.24
30 31 4.897076 AGTAAAAAGGGTTGTGGGGTTAAG 59.103 41.667 0.00 0.00 0.00 1.85
31 32 4.881361 AGTAAAAAGGGTTGTGGGGTTAA 58.119 39.130 0.00 0.00 0.00 2.01
32 33 4.472496 GAGTAAAAAGGGTTGTGGGGTTA 58.528 43.478 0.00 0.00 0.00 2.85
33 34 3.302161 GAGTAAAAAGGGTTGTGGGGTT 58.698 45.455 0.00 0.00 0.00 4.11
34 35 2.425247 GGAGTAAAAAGGGTTGTGGGGT 60.425 50.000 0.00 0.00 0.00 4.95
35 36 2.244695 GGAGTAAAAAGGGTTGTGGGG 58.755 52.381 0.00 0.00 0.00 4.96
36 37 2.952116 TGGAGTAAAAAGGGTTGTGGG 58.048 47.619 0.00 0.00 0.00 4.61
37 38 5.510690 GGAAATGGAGTAAAAAGGGTTGTGG 60.511 44.000 0.00 0.00 0.00 4.17
38 39 5.510690 GGGAAATGGAGTAAAAAGGGTTGTG 60.511 44.000 0.00 0.00 0.00 3.33
39 40 4.591498 GGGAAATGGAGTAAAAAGGGTTGT 59.409 41.667 0.00 0.00 0.00 3.32
40 41 4.838423 AGGGAAATGGAGTAAAAAGGGTTG 59.162 41.667 0.00 0.00 0.00 3.77
41 42 5.087923 AGGGAAATGGAGTAAAAAGGGTT 57.912 39.130 0.00 0.00 0.00 4.11
42 43 4.759793 AGGGAAATGGAGTAAAAAGGGT 57.240 40.909 0.00 0.00 0.00 4.34
43 44 4.838423 ACAAGGGAAATGGAGTAAAAAGGG 59.162 41.667 0.00 0.00 0.00 3.95
44 45 6.719829 ACTACAAGGGAAATGGAGTAAAAAGG 59.280 38.462 0.00 0.00 40.20 3.11
45 46 7.761038 ACTACAAGGGAAATGGAGTAAAAAG 57.239 36.000 0.00 0.00 40.20 2.27
46 47 8.219178 TGTACTACAAGGGAAATGGAGTAAAAA 58.781 33.333 0.40 0.00 43.88 1.94
47 48 7.747690 TGTACTACAAGGGAAATGGAGTAAAA 58.252 34.615 0.40 0.00 43.88 1.52
48 49 7.319052 TGTACTACAAGGGAAATGGAGTAAA 57.681 36.000 0.40 0.00 43.88 2.01
49 50 6.938698 TGTACTACAAGGGAAATGGAGTAA 57.061 37.500 0.40 0.00 43.88 2.24
50 51 6.670464 TCATGTACTACAAGGGAAATGGAGTA 59.330 38.462 0.00 0.00 40.20 2.59
51 52 5.487488 TCATGTACTACAAGGGAAATGGAGT 59.513 40.000 0.00 0.00 44.18 3.85
52 53 5.989477 TCATGTACTACAAGGGAAATGGAG 58.011 41.667 0.00 0.00 34.75 3.86
53 54 5.487488 ACTCATGTACTACAAGGGAAATGGA 59.513 40.000 0.00 0.00 0.00 3.41
54 55 5.745227 ACTCATGTACTACAAGGGAAATGG 58.255 41.667 0.00 0.00 0.00 3.16
55 56 8.786826 TTAACTCATGTACTACAAGGGAAATG 57.213 34.615 0.00 0.00 0.00 2.32
56 57 9.227777 GTTTAACTCATGTACTACAAGGGAAAT 57.772 33.333 0.00 0.00 0.00 2.17
57 58 8.434392 AGTTTAACTCATGTACTACAAGGGAAA 58.566 33.333 0.00 0.00 0.00 3.13
58 59 7.970102 AGTTTAACTCATGTACTACAAGGGAA 58.030 34.615 0.00 0.00 0.00 3.97
59 60 7.549147 AGTTTAACTCATGTACTACAAGGGA 57.451 36.000 0.00 0.00 0.00 4.20
60 61 8.617290 AAAGTTTAACTCATGTACTACAAGGG 57.383 34.615 0.00 0.00 0.00 3.95
67 68 9.841295 TGGAGTAAAAAGTTTAACTCATGTACT 57.159 29.630 22.72 11.22 40.09 2.73
79 80 8.641541 ACACATGATGAATGGAGTAAAAAGTTT 58.358 29.630 0.00 0.00 40.94 2.66
80 81 8.181904 ACACATGATGAATGGAGTAAAAAGTT 57.818 30.769 0.00 0.00 40.94 2.66
81 82 7.765695 ACACATGATGAATGGAGTAAAAAGT 57.234 32.000 0.00 0.00 40.94 2.66
162 163 9.463443 GCAAACTTTTACAATAGATGTGACTTT 57.537 29.630 0.00 0.00 43.77 2.66
163 164 8.850156 AGCAAACTTTTACAATAGATGTGACTT 58.150 29.630 0.00 0.00 43.77 3.01
164 165 8.292448 CAGCAAACTTTTACAATAGATGTGACT 58.708 33.333 0.00 0.00 43.77 3.41
165 166 8.289618 TCAGCAAACTTTTACAATAGATGTGAC 58.710 33.333 0.00 0.00 43.77 3.67
166 167 8.389779 TCAGCAAACTTTTACAATAGATGTGA 57.610 30.769 0.00 0.00 43.77 3.58
167 168 9.462174 TTTCAGCAAACTTTTACAATAGATGTG 57.538 29.630 0.00 0.00 43.77 3.21
177 178 9.937577 CGCTTTATATTTTCAGCAAACTTTTAC 57.062 29.630 0.00 0.00 32.17 2.01
178 179 9.900710 TCGCTTTATATTTTCAGCAAACTTTTA 57.099 25.926 0.00 0.00 32.17 1.52
179 180 8.810652 TCGCTTTATATTTTCAGCAAACTTTT 57.189 26.923 0.00 0.00 32.17 2.27
180 181 8.810652 TTCGCTTTATATTTTCAGCAAACTTT 57.189 26.923 0.00 0.00 32.17 2.66
181 182 8.986477 ATTCGCTTTATATTTTCAGCAAACTT 57.014 26.923 0.00 0.00 32.17 2.66
182 183 8.243426 TGATTCGCTTTATATTTTCAGCAAACT 58.757 29.630 0.00 0.00 32.17 2.66
183 184 8.313931 GTGATTCGCTTTATATTTTCAGCAAAC 58.686 33.333 0.00 0.00 32.17 2.93
184 185 8.026026 TGTGATTCGCTTTATATTTTCAGCAAA 58.974 29.630 0.00 0.00 32.17 3.68
185 186 7.534282 TGTGATTCGCTTTATATTTTCAGCAA 58.466 30.769 0.00 0.00 32.17 3.91
186 187 7.082700 TGTGATTCGCTTTATATTTTCAGCA 57.917 32.000 0.00 0.00 32.17 4.41
187 188 9.831737 ATATGTGATTCGCTTTATATTTTCAGC 57.168 29.630 0.00 0.00 0.00 4.26
201 202 9.929722 TGATGTACTTTTTAATATGTGATTCGC 57.070 29.630 0.00 0.00 0.00 4.70
215 216 8.842280 TGGTTTCGTAATCTTGATGTACTTTTT 58.158 29.630 0.00 0.00 0.00 1.94
216 217 8.385898 TGGTTTCGTAATCTTGATGTACTTTT 57.614 30.769 0.00 0.00 0.00 2.27
217 218 7.972832 TGGTTTCGTAATCTTGATGTACTTT 57.027 32.000 0.00 0.00 0.00 2.66
218 219 7.010183 CGATGGTTTCGTAATCTTGATGTACTT 59.990 37.037 0.00 0.00 43.01 2.24
219 220 6.475727 CGATGGTTTCGTAATCTTGATGTACT 59.524 38.462 0.00 0.00 43.01 2.73
220 221 6.637365 CGATGGTTTCGTAATCTTGATGTAC 58.363 40.000 0.00 0.00 43.01 2.90
221 222 6.822073 CGATGGTTTCGTAATCTTGATGTA 57.178 37.500 0.00 0.00 43.01 2.29
222 223 5.718649 CGATGGTTTCGTAATCTTGATGT 57.281 39.130 0.00 0.00 43.01 3.06
235 236 5.739161 GCAATAGTGTTTGATCGATGGTTTC 59.261 40.000 0.54 0.00 0.00 2.78
236 237 5.393027 GGCAATAGTGTTTGATCGATGGTTT 60.393 40.000 0.54 0.00 0.00 3.27
237 238 4.096382 GGCAATAGTGTTTGATCGATGGTT 59.904 41.667 0.54 0.00 0.00 3.67
238 239 3.627577 GGCAATAGTGTTTGATCGATGGT 59.372 43.478 0.54 0.00 0.00 3.55
239 240 3.303329 CGGCAATAGTGTTTGATCGATGG 60.303 47.826 0.54 0.00 31.26 3.51
240 241 3.846023 GCGGCAATAGTGTTTGATCGATG 60.846 47.826 0.54 0.00 31.26 3.84
241 242 2.287915 GCGGCAATAGTGTTTGATCGAT 59.712 45.455 0.00 0.00 31.26 3.59
242 243 1.663643 GCGGCAATAGTGTTTGATCGA 59.336 47.619 0.00 0.00 31.26 3.59
243 244 1.268032 GGCGGCAATAGTGTTTGATCG 60.268 52.381 3.07 0.00 0.00 3.69
244 245 1.742831 TGGCGGCAATAGTGTTTGATC 59.257 47.619 10.22 0.00 0.00 2.92
245 246 1.832883 TGGCGGCAATAGTGTTTGAT 58.167 45.000 10.22 0.00 0.00 2.57
246 247 1.832883 ATGGCGGCAATAGTGTTTGA 58.167 45.000 18.31 0.00 0.00 2.69
247 248 2.541588 GCTATGGCGGCAATAGTGTTTG 60.542 50.000 22.17 0.00 31.43 2.93
248 249 1.676006 GCTATGGCGGCAATAGTGTTT 59.324 47.619 22.17 0.00 31.43 2.83
249 250 1.308998 GCTATGGCGGCAATAGTGTT 58.691 50.000 22.17 0.00 31.43 3.32
250 251 0.180171 TGCTATGGCGGCAATAGTGT 59.820 50.000 22.17 0.00 42.25 3.55
251 252 1.308047 TTGCTATGGCGGCAATAGTG 58.692 50.000 22.17 5.73 43.50 2.74
252 253 2.051334 TTTGCTATGGCGGCAATAGT 57.949 45.000 22.17 0.85 46.81 2.12
253 254 2.816087 AGATTTGCTATGGCGGCAATAG 59.184 45.455 18.31 18.26 46.81 1.73
254 255 2.862541 AGATTTGCTATGGCGGCAATA 58.137 42.857 18.31 8.29 46.81 1.90
255 256 1.696063 AGATTTGCTATGGCGGCAAT 58.304 45.000 18.31 2.90 46.81 3.56
256 257 1.473258 AAGATTTGCTATGGCGGCAA 58.527 45.000 18.31 3.39 46.12 4.52
257 258 1.946768 GTAAGATTTGCTATGGCGGCA 59.053 47.619 16.34 16.34 42.25 5.69
258 259 2.222027 AGTAAGATTTGCTATGGCGGC 58.778 47.619 0.00 0.00 42.25 6.53
259 260 2.808543 GGAGTAAGATTTGCTATGGCGG 59.191 50.000 0.00 0.00 42.25 6.13
260 261 2.808543 GGGAGTAAGATTTGCTATGGCG 59.191 50.000 0.00 0.00 42.25 5.69
261 262 3.149981 GGGGAGTAAGATTTGCTATGGC 58.850 50.000 0.00 0.00 39.26 4.40
262 263 3.403038 CGGGGAGTAAGATTTGCTATGG 58.597 50.000 0.00 0.00 0.00 2.74
263 264 2.808543 GCGGGGAGTAAGATTTGCTATG 59.191 50.000 0.00 0.00 0.00 2.23
264 265 2.706190 AGCGGGGAGTAAGATTTGCTAT 59.294 45.455 0.00 0.00 0.00 2.97
265 266 2.116238 AGCGGGGAGTAAGATTTGCTA 58.884 47.619 0.00 0.00 0.00 3.49
266 267 0.912486 AGCGGGGAGTAAGATTTGCT 59.088 50.000 0.00 0.00 0.00 3.91
267 268 2.210961 GTAGCGGGGAGTAAGATTTGC 58.789 52.381 0.00 0.00 0.00 3.68
268 269 2.470821 CGTAGCGGGGAGTAAGATTTG 58.529 52.381 0.00 0.00 0.00 2.32
269 270 2.884894 CGTAGCGGGGAGTAAGATTT 57.115 50.000 0.00 0.00 0.00 2.17
304 305 5.591099 ACAAGCAACGTTTGAGAAATCATT 58.409 33.333 0.00 0.00 0.00 2.57
308 309 5.493133 TGTACAAGCAACGTTTGAGAAAT 57.507 34.783 0.00 0.00 0.00 2.17
339 340 9.847706 TCTCAGCGCAATAAATTTGTTTAAATA 57.152 25.926 11.47 0.00 35.50 1.40
340 341 8.647226 GTCTCAGCGCAATAAATTTGTTTAAAT 58.353 29.630 11.47 0.00 38.11 1.40
347 348 4.973396 TCAGTCTCAGCGCAATAAATTTG 58.027 39.130 11.47 0.00 0.00 2.32
350 351 3.201290 CCTCAGTCTCAGCGCAATAAAT 58.799 45.455 11.47 0.00 0.00 1.40
354 355 1.449246 GCCTCAGTCTCAGCGCAAT 60.449 57.895 11.47 0.00 0.00 3.56
355 356 2.047844 GCCTCAGTCTCAGCGCAA 60.048 61.111 11.47 0.00 0.00 4.85
357 358 2.202730 GAGCCTCAGTCTCAGCGC 60.203 66.667 0.00 0.00 0.00 5.92
367 368 1.134995 CGTTGCTGTATCTGAGCCTCA 60.135 52.381 0.00 0.00 35.43 3.86
368 369 1.135139 TCGTTGCTGTATCTGAGCCTC 59.865 52.381 0.00 0.00 35.43 4.70
383 384 0.594796 GTGTTGGGCAAAGCTCGTTG 60.595 55.000 0.00 0.00 0.00 4.10
385 386 0.823356 ATGTGTTGGGCAAAGCTCGT 60.823 50.000 0.00 0.00 0.00 4.18
386 387 0.387622 CATGTGTTGGGCAAAGCTCG 60.388 55.000 0.00 0.00 0.00 5.03
396 397 4.116961 GCATCCATTGAATCATGTGTTGG 58.883 43.478 0.00 0.00 0.00 3.77
399 400 5.408880 TTTGCATCCATTGAATCATGTGT 57.591 34.783 0.00 0.00 0.00 3.72
400 401 6.103330 TCTTTTGCATCCATTGAATCATGTG 58.897 36.000 0.00 0.00 0.00 3.21
404 405 6.995364 TCTTTCTTTTGCATCCATTGAATCA 58.005 32.000 0.00 0.00 0.00 2.57
406 407 7.601508 GTCTTCTTTCTTTTGCATCCATTGAAT 59.398 33.333 0.00 0.00 0.00 2.57
407 408 6.925165 GTCTTCTTTCTTTTGCATCCATTGAA 59.075 34.615 0.00 0.00 0.00 2.69
408 409 6.449698 GTCTTCTTTCTTTTGCATCCATTGA 58.550 36.000 0.00 0.00 0.00 2.57
410 411 5.541484 AGGTCTTCTTTCTTTTGCATCCATT 59.459 36.000 0.00 0.00 0.00 3.16
420 422 3.494573 GGGTGTCGAGGTCTTCTTTCTTT 60.495 47.826 0.00 0.00 0.00 2.52
421 423 2.037381 GGGTGTCGAGGTCTTCTTTCTT 59.963 50.000 0.00 0.00 0.00 2.52
425 427 2.599408 TAGGGTGTCGAGGTCTTCTT 57.401 50.000 0.00 0.00 0.00 2.52
427 429 3.257624 TCTTTTAGGGTGTCGAGGTCTTC 59.742 47.826 0.00 0.00 0.00 2.87
430 432 3.889520 ATCTTTTAGGGTGTCGAGGTC 57.110 47.619 0.00 0.00 0.00 3.85
431 433 4.041198 TCAAATCTTTTAGGGTGTCGAGGT 59.959 41.667 0.00 0.00 0.00 3.85
432 434 4.575885 TCAAATCTTTTAGGGTGTCGAGG 58.424 43.478 0.00 0.00 0.00 4.63
433 435 6.149474 ACATTCAAATCTTTTAGGGTGTCGAG 59.851 38.462 0.00 0.00 0.00 4.04
435 437 6.086222 CACATTCAAATCTTTTAGGGTGTCG 58.914 40.000 0.00 0.00 0.00 4.35
437 439 6.976934 ACACATTCAAATCTTTTAGGGTGT 57.023 33.333 0.00 0.00 0.00 4.16
438 440 8.661352 AAAACACATTCAAATCTTTTAGGGTG 57.339 30.769 0.00 0.00 0.00 4.61
483 485 9.358872 GCTACAAATCCTTAAAATCCAAAAGAG 57.641 33.333 0.00 0.00 0.00 2.85
485 487 8.925700 GTGCTACAAATCCTTAAAATCCAAAAG 58.074 33.333 0.00 0.00 0.00 2.27
486 488 8.646900 AGTGCTACAAATCCTTAAAATCCAAAA 58.353 29.630 0.00 0.00 0.00 2.44
487 489 8.189119 AGTGCTACAAATCCTTAAAATCCAAA 57.811 30.769 0.00 0.00 0.00 3.28
489 491 8.107095 AGTAGTGCTACAAATCCTTAAAATCCA 58.893 33.333 11.39 0.00 38.48 3.41
490 492 8.507524 AGTAGTGCTACAAATCCTTAAAATCC 57.492 34.615 11.39 0.00 38.48 3.01
497 499 8.730680 CAACATTAAGTAGTGCTACAAATCCTT 58.269 33.333 11.39 0.00 38.48 3.36
498 500 7.336931 CCAACATTAAGTAGTGCTACAAATCCT 59.663 37.037 11.39 0.00 38.48 3.24
499 501 7.472543 CCAACATTAAGTAGTGCTACAAATCC 58.527 38.462 11.39 0.00 38.48 3.01
500 502 6.967199 GCCAACATTAAGTAGTGCTACAAATC 59.033 38.462 11.39 0.00 38.48 2.17
501 503 6.127730 GGCCAACATTAAGTAGTGCTACAAAT 60.128 38.462 11.39 7.76 38.48 2.32
502 504 5.182380 GGCCAACATTAAGTAGTGCTACAAA 59.818 40.000 11.39 6.03 38.48 2.83
504 506 4.019681 AGGCCAACATTAAGTAGTGCTACA 60.020 41.667 5.01 0.00 38.48 2.74
505 507 4.514401 AGGCCAACATTAAGTAGTGCTAC 58.486 43.478 5.01 1.33 36.35 3.58
507 509 3.721087 AGGCCAACATTAAGTAGTGCT 57.279 42.857 5.01 0.00 0.00 4.40
508 510 4.783764 AAAGGCCAACATTAAGTAGTGC 57.216 40.909 5.01 0.00 0.00 4.40
510 512 6.068670 AGACAAAAGGCCAACATTAAGTAGT 58.931 36.000 5.01 0.00 0.00 2.73
512 514 6.969993 AAGACAAAAGGCCAACATTAAGTA 57.030 33.333 5.01 0.00 0.00 2.24
513 515 5.869649 AAGACAAAAGGCCAACATTAAGT 57.130 34.783 5.01 0.00 0.00 2.24
514 516 6.986231 AGAAAAGACAAAAGGCCAACATTAAG 59.014 34.615 5.01 0.00 0.00 1.85
517 519 5.357742 AGAAAAGACAAAAGGCCAACATT 57.642 34.783 5.01 0.00 0.00 2.71
518 520 6.478512 TTAGAAAAGACAAAAGGCCAACAT 57.521 33.333 5.01 0.00 0.00 2.71
519 521 5.923733 TTAGAAAAGACAAAAGGCCAACA 57.076 34.783 5.01 0.00 0.00 3.33
520 522 6.569780 TCTTTAGAAAAGACAAAAGGCCAAC 58.430 36.000 5.01 0.00 31.37 3.77
551 1030 2.669364 CTGGATTGCTTGCAGTGTTTC 58.331 47.619 0.00 0.00 38.86 2.78
558 1037 2.910199 CTACTAGCTGGATTGCTTGCA 58.090 47.619 3.17 0.00 43.74 4.08
559 1038 1.601430 GCTACTAGCTGGATTGCTTGC 59.399 52.381 3.17 0.00 43.74 4.01
569 1048 0.943359 GGCTGATGCGCTACTAGCTG 60.943 60.000 19.89 5.18 39.60 4.24
575 1054 2.962253 GGTCGGCTGATGCGCTAC 60.962 66.667 9.73 2.86 40.82 3.58
579 1058 2.584418 CAGAGGTCGGCTGATGCG 60.584 66.667 0.00 0.00 40.82 4.73
609 1096 1.967319 AGTCATGTGGTTTTGCTCGT 58.033 45.000 0.00 0.00 0.00 4.18
635 1133 1.521423 CGTCAGTCCGTCTGTTGAAAC 59.479 52.381 5.09 0.00 43.97 2.78
667 1165 0.537371 GGCCCTGGAATCATTACGGG 60.537 60.000 0.00 0.00 34.79 5.28
674 1172 2.287896 ATGGGGGCCCTGGAATCA 60.288 61.111 24.38 11.32 36.94 2.57
699 1198 1.051812 GATCGGGATGTGATGGACCT 58.948 55.000 0.00 0.00 0.00 3.85
839 1350 4.084485 CGTTCGGTTTGTTTGTTGGTTTTT 60.084 37.500 0.00 0.00 0.00 1.94
840 1351 3.429207 CGTTCGGTTTGTTTGTTGGTTTT 59.571 39.130 0.00 0.00 0.00 2.43
841 1352 2.987821 CGTTCGGTTTGTTTGTTGGTTT 59.012 40.909 0.00 0.00 0.00 3.27
842 1353 2.597520 CGTTCGGTTTGTTTGTTGGTT 58.402 42.857 0.00 0.00 0.00 3.67
843 1354 1.733061 GCGTTCGGTTTGTTTGTTGGT 60.733 47.619 0.00 0.00 0.00 3.67
844 1355 0.917939 GCGTTCGGTTTGTTTGTTGG 59.082 50.000 0.00 0.00 0.00 3.77
1023 1580 1.007118 TGAGTGATGGCTGGAGGTAGA 59.993 52.381 0.00 0.00 0.00 2.59
1073 1723 1.739929 TCGTATGTGTGCCCTTGCG 60.740 57.895 0.00 0.00 41.78 4.85
1079 1729 2.596904 AGGTATGTCGTATGTGTGCC 57.403 50.000 0.00 0.00 0.00 5.01
1080 1730 3.517602 TGAAGGTATGTCGTATGTGTGC 58.482 45.455 0.00 0.00 0.00 4.57
1084 1734 2.426024 ACGCTGAAGGTATGTCGTATGT 59.574 45.455 0.00 0.00 0.00 2.29
1085 1735 3.043586 GACGCTGAAGGTATGTCGTATG 58.956 50.000 0.00 0.00 0.00 2.39
1086 1736 2.950309 AGACGCTGAAGGTATGTCGTAT 59.050 45.455 0.00 0.00 34.82 3.06
1087 1737 2.353889 GAGACGCTGAAGGTATGTCGTA 59.646 50.000 0.00 0.00 34.82 3.43
1088 1738 1.132643 GAGACGCTGAAGGTATGTCGT 59.867 52.381 0.00 0.00 34.82 4.34
1089 1739 1.828832 GAGACGCTGAAGGTATGTCG 58.171 55.000 0.00 0.00 34.82 4.35
1090 1740 1.534175 CCGAGACGCTGAAGGTATGTC 60.534 57.143 0.00 0.00 0.00 3.06
1094 1757 2.882876 GCCGAGACGCTGAAGGTA 59.117 61.111 0.00 0.00 0.00 3.08
1122 1789 0.833287 ATCATGTACTGCCGGCTCTT 59.167 50.000 29.70 14.12 0.00 2.85
1198 1889 2.047179 GCTCCGGCGAGAAAACCT 60.047 61.111 9.30 0.00 38.52 3.50
1283 1974 2.101233 GCTCGCCGGGAAGAAGAAC 61.101 63.158 2.18 0.00 0.00 3.01
1348 2048 2.815647 CCTCCGCGCTGAAGAACC 60.816 66.667 5.56 0.00 0.00 3.62
1730 2448 4.011517 GTTTCCCCCTCGTCCGCA 62.012 66.667 0.00 0.00 0.00 5.69
1772 2490 1.699083 TCCAGCTTCATCAAGTCCACA 59.301 47.619 0.00 0.00 31.45 4.17
1834 2558 1.267832 CCGGTGCGTGAAATTTATCCG 60.268 52.381 0.00 0.00 37.04 4.18
1904 2629 4.519730 ACTCTATCTGGTATACTCGCCAAC 59.480 45.833 2.25 0.00 33.93 3.77
1907 2632 3.440872 CCACTCTATCTGGTATACTCGCC 59.559 52.174 2.25 0.00 0.00 5.54
1913 2638 5.828328 CACTGACACCACTCTATCTGGTATA 59.172 44.000 0.00 0.00 40.25 1.47
1926 2654 1.762222 GACACGCACACTGACACCAC 61.762 60.000 0.00 0.00 0.00 4.16
1940 2668 2.602211 GACTGCTGATTGAGATGACACG 59.398 50.000 0.00 0.00 0.00 4.49
1941 2669 3.593096 TGACTGCTGATTGAGATGACAC 58.407 45.455 0.00 0.00 0.00 3.67
1942 2670 3.858247 CTGACTGCTGATTGAGATGACA 58.142 45.455 0.00 0.00 0.00 3.58
1943 2671 2.608546 GCTGACTGCTGATTGAGATGAC 59.391 50.000 0.00 0.00 38.95 3.06
1944 2672 2.235402 TGCTGACTGCTGATTGAGATGA 59.765 45.455 5.87 0.00 43.37 2.92
1945 2673 2.352034 GTGCTGACTGCTGATTGAGATG 59.648 50.000 5.87 0.00 43.37 2.90
1946 2674 2.027469 TGTGCTGACTGCTGATTGAGAT 60.027 45.455 5.87 0.00 43.37 2.75
1947 2675 1.345415 TGTGCTGACTGCTGATTGAGA 59.655 47.619 5.87 0.00 43.37 3.27
1948 2676 1.463831 GTGTGCTGACTGCTGATTGAG 59.536 52.381 5.87 0.00 43.37 3.02
1949 2677 1.071228 AGTGTGCTGACTGCTGATTGA 59.929 47.619 5.87 0.00 43.37 2.57
1950 2678 1.520494 AGTGTGCTGACTGCTGATTG 58.480 50.000 5.87 0.00 43.37 2.67
1951 2679 1.878088 CAAGTGTGCTGACTGCTGATT 59.122 47.619 5.87 0.00 43.37 2.57
1952 2680 1.202734 ACAAGTGTGCTGACTGCTGAT 60.203 47.619 5.87 0.00 43.37 2.90
1953 2681 0.178767 ACAAGTGTGCTGACTGCTGA 59.821 50.000 5.87 0.00 43.37 4.26
1954 2682 1.869774 TACAAGTGTGCTGACTGCTG 58.130 50.000 5.87 0.00 43.37 4.41
1955 2683 2.420642 CATACAAGTGTGCTGACTGCT 58.579 47.619 5.87 0.00 43.37 4.24
1956 2684 1.135859 GCATACAAGTGTGCTGACTGC 60.136 52.381 13.67 0.00 43.18 4.40
1957 2685 1.466167 GGCATACAAGTGTGCTGACTG 59.534 52.381 18.98 0.00 45.36 3.51
1958 2686 1.072173 TGGCATACAAGTGTGCTGACT 59.928 47.619 18.98 0.00 45.36 3.41
1959 2687 1.197721 GTGGCATACAAGTGTGCTGAC 59.802 52.381 18.98 13.04 45.36 3.51
1960 2688 1.072173 AGTGGCATACAAGTGTGCTGA 59.928 47.619 18.98 6.11 45.36 4.26
1961 2689 1.466167 GAGTGGCATACAAGTGTGCTG 59.534 52.381 18.98 4.81 45.36 4.41
1962 2690 1.611673 GGAGTGGCATACAAGTGTGCT 60.612 52.381 18.98 2.39 45.36 4.40
1963 2691 0.804989 GGAGTGGCATACAAGTGTGC 59.195 55.000 12.72 12.72 45.32 4.57
1964 2692 2.479566 AGGAGTGGCATACAAGTGTG 57.520 50.000 0.00 0.00 0.00 3.82
1965 2693 4.384208 GGATTAGGAGTGGCATACAAGTGT 60.384 45.833 0.00 0.00 0.00 3.55
1966 2694 4.130118 GGATTAGGAGTGGCATACAAGTG 58.870 47.826 0.00 0.00 0.00 3.16
1967 2695 4.040755 AGGATTAGGAGTGGCATACAAGT 58.959 43.478 0.00 0.00 0.00 3.16
2055 2820 4.753233 TGGTTCAACACAACTTTTCCATG 58.247 39.130 0.00 0.00 0.00 3.66
2106 2871 6.187727 TGACAGAGGAGTATGGTTCTTTTT 57.812 37.500 0.00 0.00 0.00 1.94
2107 2872 5.825593 TGACAGAGGAGTATGGTTCTTTT 57.174 39.130 0.00 0.00 0.00 2.27
2108 2873 5.249393 ACATGACAGAGGAGTATGGTTCTTT 59.751 40.000 0.00 0.00 0.00 2.52
2109 2874 4.780021 ACATGACAGAGGAGTATGGTTCTT 59.220 41.667 0.00 0.00 0.00 2.52
2110 2875 4.357325 ACATGACAGAGGAGTATGGTTCT 58.643 43.478 0.00 0.00 0.00 3.01
2111 2876 4.744795 ACATGACAGAGGAGTATGGTTC 57.255 45.455 0.00 0.00 0.00 3.62
2112 2877 4.836825 CAACATGACAGAGGAGTATGGTT 58.163 43.478 0.00 0.00 0.00 3.67
2113 2878 3.369892 GCAACATGACAGAGGAGTATGGT 60.370 47.826 0.00 0.00 0.00 3.55
2114 2879 3.201290 GCAACATGACAGAGGAGTATGG 58.799 50.000 0.00 0.00 0.00 2.74
2115 2880 3.865446 TGCAACATGACAGAGGAGTATG 58.135 45.455 0.00 0.00 0.00 2.39
2116 2881 4.080695 ACATGCAACATGACAGAGGAGTAT 60.081 41.667 14.17 0.00 0.00 2.12
2117 2882 3.261643 ACATGCAACATGACAGAGGAGTA 59.738 43.478 14.17 0.00 0.00 2.59
2118 2883 2.039480 ACATGCAACATGACAGAGGAGT 59.961 45.455 14.17 0.00 0.00 3.85
2119 2884 2.708051 ACATGCAACATGACAGAGGAG 58.292 47.619 14.17 0.00 0.00 3.69
2120 2885 2.865119 ACATGCAACATGACAGAGGA 57.135 45.000 14.17 0.00 0.00 3.71
2121 2886 2.941064 CCTACATGCAACATGACAGAGG 59.059 50.000 14.17 10.20 0.00 3.69
2122 2887 2.353889 GCCTACATGCAACATGACAGAG 59.646 50.000 14.17 5.81 0.00 3.35
2123 2888 2.290197 TGCCTACATGCAACATGACAGA 60.290 45.455 14.17 0.00 38.56 3.41
2124 2889 2.086094 TGCCTACATGCAACATGACAG 58.914 47.619 14.17 9.86 38.56 3.51
2125 2890 2.197283 TGCCTACATGCAACATGACA 57.803 45.000 14.17 4.41 38.56 3.58
2142 2907 6.183360 ACAGATAAGCCCAAAATAGGATTTGC 60.183 38.462 0.00 0.00 38.64 3.68
2217 2992 5.767816 AACACCATTAGAGTTCCAACAAC 57.232 39.130 0.00 0.00 0.00 3.32
2317 3092 0.612744 TGTGATCATCTTCGGTGCCA 59.387 50.000 0.00 0.00 0.00 4.92
2319 3094 2.033407 CGATTGTGATCATCTTCGGTGC 60.033 50.000 0.00 0.00 32.33 5.01
2322 3097 3.055591 CTCCGATTGTGATCATCTTCGG 58.944 50.000 25.32 25.32 40.43 4.30
2323 3098 3.711086 ACTCCGATTGTGATCATCTTCG 58.289 45.455 13.86 13.86 32.33 3.79
2329 3104 2.159379 CGAGTGACTCCGATTGTGATCA 60.159 50.000 7.07 0.00 32.33 2.92
2360 3135 0.907704 ATGTGGGTTCGCCTAGTCCA 60.908 55.000 0.00 0.00 37.45 4.02
2361 3136 0.462047 CATGTGGGTTCGCCTAGTCC 60.462 60.000 0.00 0.00 37.45 3.85
2414 3270 6.712095 TCATTAAACCATGTAGCATCCATCTC 59.288 38.462 0.00 0.00 0.00 2.75
2417 3273 5.536161 GGTCATTAAACCATGTAGCATCCAT 59.464 40.000 0.00 0.00 39.27 3.41
2448 3305 7.163734 CCAAGATATTTGGCAACGGATTCGT 62.164 44.000 0.00 0.00 41.17 3.85
2462 3319 5.839517 AGCTCATAGCCTCCAAGATATTT 57.160 39.130 0.00 0.00 43.77 1.40
2528 3385 2.242043 CCTTCACCATTGGCTTTGTCT 58.758 47.619 1.54 0.00 0.00 3.41
2529 3386 1.337167 GCCTTCACCATTGGCTTTGTC 60.337 52.381 1.54 0.00 43.05 3.18
2530 3387 0.681175 GCCTTCACCATTGGCTTTGT 59.319 50.000 1.54 0.00 43.05 2.83
2531 3388 0.680618 TGCCTTCACCATTGGCTTTG 59.319 50.000 1.54 0.00 46.23 2.77
2532 3389 0.681175 GTGCCTTCACCATTGGCTTT 59.319 50.000 1.54 0.00 46.23 3.51
2533 3390 2.354902 GTGCCTTCACCATTGGCTT 58.645 52.632 1.54 0.00 46.23 4.35
2546 3403 6.418057 TTTCTGTTTGAAATTATGGTGCCT 57.582 33.333 0.00 0.00 39.50 4.75
2561 3418 0.469144 ACACCCGGCCATTTCTGTTT 60.469 50.000 2.24 0.00 0.00 2.83
2580 3437 2.468670 GCATCGGCCGCATTGTGTA 61.469 57.895 23.51 0.00 0.00 2.90
2596 3453 6.855763 AGGTTTCCTATTGAAATTGATGCA 57.144 33.333 0.00 0.00 44.44 3.96
2848 7257 6.591935 TGATGGTTTACAGGCTTATTAGGAG 58.408 40.000 0.00 0.00 0.00 3.69
2907 7316 1.336755 GGCGTCAACATGTTTTGTCCT 59.663 47.619 8.77 0.00 37.68 3.85
2946 7355 7.516943 GCAAGGTTCGTATCTAAGCTAATTCAC 60.517 40.741 0.00 0.00 33.74 3.18
3004 7413 6.531503 TGGTCCACATAACTAAGAGAAGAG 57.468 41.667 0.00 0.00 0.00 2.85
3019 7428 5.306937 TCAAAAAGAGTAGAGATGGTCCACA 59.693 40.000 0.00 0.00 0.00 4.17
3020 7429 5.794894 TCAAAAAGAGTAGAGATGGTCCAC 58.205 41.667 0.00 0.00 0.00 4.02
3057 7466 0.816825 ACGCATGGGCATCTTGCTAG 60.817 55.000 10.10 0.00 44.28 3.42
3058 7467 0.394216 AACGCATGGGCATCTTGCTA 60.394 50.000 10.10 0.00 44.28 3.49
3059 7468 1.679977 AACGCATGGGCATCTTGCT 60.680 52.632 10.10 0.00 44.28 3.91
3060 7469 1.517694 CAACGCATGGGCATCTTGC 60.518 57.895 10.10 6.97 44.08 4.01
3061 7470 1.517694 GCAACGCATGGGCATCTTG 60.518 57.895 10.10 7.97 41.24 3.02
3062 7471 1.978080 TGCAACGCATGGGCATCTT 60.978 52.632 10.10 0.00 41.24 2.40
3063 7472 2.361483 TGCAACGCATGGGCATCT 60.361 55.556 10.10 0.00 41.24 2.90
3064 7473 2.202650 GTGCAACGCATGGGCATC 60.203 61.111 10.10 0.00 41.91 3.91
3075 7484 2.855180 CATCTTGATGTTCCGTGCAAC 58.145 47.619 0.00 0.00 0.00 4.17
3076 7485 1.199789 GCATCTTGATGTTCCGTGCAA 59.800 47.619 11.61 0.00 0.00 4.08
3077 7486 0.804364 GCATCTTGATGTTCCGTGCA 59.196 50.000 11.61 0.00 0.00 4.57
3078 7487 0.804364 TGCATCTTGATGTTCCGTGC 59.196 50.000 11.61 0.00 0.00 5.34
3079 7488 3.770263 AATGCATCTTGATGTTCCGTG 57.230 42.857 0.00 0.00 0.00 4.94
3080 7489 3.507233 ACAAATGCATCTTGATGTTCCGT 59.493 39.130 20.96 2.07 0.00 4.69
3081 7490 4.100707 ACAAATGCATCTTGATGTTCCG 57.899 40.909 20.96 1.56 0.00 4.30
3082 7491 6.798482 TCATACAAATGCATCTTGATGTTCC 58.202 36.000 20.96 0.00 32.76 3.62
3083 7492 7.478322 ACTCATACAAATGCATCTTGATGTTC 58.522 34.615 20.96 0.00 32.76 3.18
3084 7493 7.400599 ACTCATACAAATGCATCTTGATGTT 57.599 32.000 20.96 1.04 32.76 2.71
3085 7494 7.772292 ACTACTCATACAAATGCATCTTGATGT 59.228 33.333 20.96 14.21 32.76 3.06
3086 7495 8.151141 ACTACTCATACAAATGCATCTTGATG 57.849 34.615 20.96 18.39 32.76 3.07
3087 7496 8.743085 AACTACTCATACAAATGCATCTTGAT 57.257 30.769 20.96 11.48 32.76 2.57
3088 7497 8.565896 AAACTACTCATACAAATGCATCTTGA 57.434 30.769 20.96 10.81 32.76 3.02
3094 7503 9.448438 ACAAGATAAACTACTCATACAAATGCA 57.552 29.630 0.00 0.00 32.76 3.96
3095 7504 9.708222 CACAAGATAAACTACTCATACAAATGC 57.292 33.333 0.00 0.00 32.76 3.56
3097 7506 9.396022 CCCACAAGATAAACTACTCATACAAAT 57.604 33.333 0.00 0.00 0.00 2.32
3098 7507 8.598916 TCCCACAAGATAAACTACTCATACAAA 58.401 33.333 0.00 0.00 0.00 2.83
3099 7508 8.141298 TCCCACAAGATAAACTACTCATACAA 57.859 34.615 0.00 0.00 0.00 2.41
3100 7509 7.618117 TCTCCCACAAGATAAACTACTCATACA 59.382 37.037 0.00 0.00 0.00 2.29
3101 7510 8.008513 TCTCCCACAAGATAAACTACTCATAC 57.991 38.462 0.00 0.00 0.00 2.39
3102 7511 8.603898 TTCTCCCACAAGATAAACTACTCATA 57.396 34.615 0.00 0.00 0.00 2.15
3103 7512 7.496346 TTCTCCCACAAGATAAACTACTCAT 57.504 36.000 0.00 0.00 0.00 2.90
3104 7513 6.928348 TTCTCCCACAAGATAAACTACTCA 57.072 37.500 0.00 0.00 0.00 3.41
3105 7514 7.334671 CCTTTTCTCCCACAAGATAAACTACTC 59.665 40.741 0.00 0.00 0.00 2.59
3106 7515 7.017254 TCCTTTTCTCCCACAAGATAAACTACT 59.983 37.037 0.00 0.00 0.00 2.57
3107 7516 7.166167 TCCTTTTCTCCCACAAGATAAACTAC 58.834 38.462 0.00 0.00 0.00 2.73
3108 7517 7.324388 TCCTTTTCTCCCACAAGATAAACTA 57.676 36.000 0.00 0.00 0.00 2.24
3109 7518 6.200878 TCCTTTTCTCCCACAAGATAAACT 57.799 37.500 0.00 0.00 0.00 2.66
3110 7519 6.659242 TCATCCTTTTCTCCCACAAGATAAAC 59.341 38.462 0.00 0.00 0.00 2.01
3111 7520 6.789268 TCATCCTTTTCTCCCACAAGATAAA 58.211 36.000 0.00 0.00 0.00 1.40
3112 7521 6.387192 TCATCCTTTTCTCCCACAAGATAA 57.613 37.500 0.00 0.00 0.00 1.75
3113 7522 6.180472 GTTCATCCTTTTCTCCCACAAGATA 58.820 40.000 0.00 0.00 0.00 1.98
3114 7523 4.934797 TCATCCTTTTCTCCCACAAGAT 57.065 40.909 0.00 0.00 0.00 2.40
3115 7524 4.398319 GTTCATCCTTTTCTCCCACAAGA 58.602 43.478 0.00 0.00 0.00 3.02
3116 7525 3.189287 CGTTCATCCTTTTCTCCCACAAG 59.811 47.826 0.00 0.00 0.00 3.16
3117 7526 3.146066 CGTTCATCCTTTTCTCCCACAA 58.854 45.455 0.00 0.00 0.00 3.33
3118 7527 2.370519 TCGTTCATCCTTTTCTCCCACA 59.629 45.455 0.00 0.00 0.00 4.17
3119 7528 3.003480 CTCGTTCATCCTTTTCTCCCAC 58.997 50.000 0.00 0.00 0.00 4.61
3120 7529 2.027192 CCTCGTTCATCCTTTTCTCCCA 60.027 50.000 0.00 0.00 0.00 4.37
3121 7530 2.236395 TCCTCGTTCATCCTTTTCTCCC 59.764 50.000 0.00 0.00 0.00 4.30
3122 7531 3.611766 TCCTCGTTCATCCTTTTCTCC 57.388 47.619 0.00 0.00 0.00 3.71
3123 7532 5.674820 GCATTTCCTCGTTCATCCTTTTCTC 60.675 44.000 0.00 0.00 0.00 2.87
3124 7533 4.156739 GCATTTCCTCGTTCATCCTTTTCT 59.843 41.667 0.00 0.00 0.00 2.52
3125 7534 4.415735 GCATTTCCTCGTTCATCCTTTTC 58.584 43.478 0.00 0.00 0.00 2.29
3126 7535 3.193479 GGCATTTCCTCGTTCATCCTTTT 59.807 43.478 0.00 0.00 0.00 2.27
3127 7536 2.755103 GGCATTTCCTCGTTCATCCTTT 59.245 45.455 0.00 0.00 0.00 3.11
3128 7537 2.025887 AGGCATTTCCTCGTTCATCCTT 60.026 45.455 0.00 0.00 43.20 3.36
3129 7538 1.561542 AGGCATTTCCTCGTTCATCCT 59.438 47.619 0.00 0.00 43.20 3.24
3130 7539 2.044123 AGGCATTTCCTCGTTCATCC 57.956 50.000 0.00 0.00 43.20 3.51
3131 7540 5.757850 AATAAGGCATTTCCTCGTTCATC 57.242 39.130 0.00 0.00 46.94 2.92
3132 7541 5.679638 GCAAATAAGGCATTTCCTCGTTCAT 60.680 40.000 0.00 0.00 46.94 2.57
3133 7542 4.380444 GCAAATAAGGCATTTCCTCGTTCA 60.380 41.667 0.00 0.00 46.94 3.18
3134 7543 4.105486 GCAAATAAGGCATTTCCTCGTTC 58.895 43.478 0.00 0.00 46.94 3.95
3135 7544 3.509575 TGCAAATAAGGCATTTCCTCGTT 59.490 39.130 0.00 0.00 46.94 3.85
3136 7545 3.088532 TGCAAATAAGGCATTTCCTCGT 58.911 40.909 0.00 0.00 46.94 4.18
3137 7546 3.781079 TGCAAATAAGGCATTTCCTCG 57.219 42.857 0.00 0.00 46.94 4.63
3138 7547 5.220719 GCATTTGCAAATAAGGCATTTCCTC 60.221 40.000 23.69 0.00 42.35 3.71
3139 7548 4.637091 GCATTTGCAAATAAGGCATTTCCT 59.363 37.500 23.69 0.00 44.02 3.36
3140 7549 4.494526 CGCATTTGCAAATAAGGCATTTCC 60.495 41.667 23.69 0.00 41.58 3.13
3141 7550 4.494526 CCGCATTTGCAAATAAGGCATTTC 60.495 41.667 23.69 4.90 41.58 2.17
3142 7551 3.374678 CCGCATTTGCAAATAAGGCATTT 59.625 39.130 23.69 0.00 41.58 2.32
3143 7552 2.937799 CCGCATTTGCAAATAAGGCATT 59.062 40.909 23.69 0.00 41.58 3.56
3144 7553 2.168106 TCCGCATTTGCAAATAAGGCAT 59.832 40.909 27.33 6.76 41.58 4.40
3145 7554 1.547820 TCCGCATTTGCAAATAAGGCA 59.452 42.857 27.33 18.51 42.21 4.75
3146 7555 2.159254 TCTCCGCATTTGCAAATAAGGC 60.159 45.455 27.33 23.16 42.21 4.35
3147 7556 3.489738 CCTCTCCGCATTTGCAAATAAGG 60.490 47.826 26.71 26.71 42.21 2.69
3148 7557 3.489738 CCCTCTCCGCATTTGCAAATAAG 60.490 47.826 23.69 18.80 42.21 1.73
3149 7558 2.426738 CCCTCTCCGCATTTGCAAATAA 59.573 45.455 23.69 9.41 42.21 1.40
3150 7559 2.023673 CCCTCTCCGCATTTGCAAATA 58.976 47.619 23.69 8.18 42.21 1.40
3151 7560 0.819582 CCCTCTCCGCATTTGCAAAT 59.180 50.000 18.99 18.99 42.21 2.32
3152 7561 1.250154 CCCCTCTCCGCATTTGCAAA 61.250 55.000 15.44 15.44 42.21 3.68
3153 7562 1.678635 CCCCTCTCCGCATTTGCAA 60.679 57.895 0.00 0.00 42.21 4.08
3154 7563 2.045045 CCCCTCTCCGCATTTGCA 60.045 61.111 3.13 0.00 42.21 4.08
3155 7564 2.044946 ACCCCTCTCCGCATTTGC 60.045 61.111 0.00 0.00 37.78 3.68
3156 7565 2.409870 GCACCCCTCTCCGCATTTG 61.410 63.158 0.00 0.00 0.00 2.32
3157 7566 2.044946 GCACCCCTCTCCGCATTT 60.045 61.111 0.00 0.00 0.00 2.32
3158 7567 4.473520 CGCACCCCTCTCCGCATT 62.474 66.667 0.00 0.00 0.00 3.56
3163 7572 2.446036 ATACCCGCACCCCTCTCC 60.446 66.667 0.00 0.00 0.00 3.71
3164 7573 1.049289 AAGATACCCGCACCCCTCTC 61.049 60.000 0.00 0.00 0.00 3.20
3165 7574 0.620700 AAAGATACCCGCACCCCTCT 60.621 55.000 0.00 0.00 0.00 3.69
3166 7575 0.255033 AAAAGATACCCGCACCCCTC 59.745 55.000 0.00 0.00 0.00 4.30
3167 7576 0.702316 AAAAAGATACCCGCACCCCT 59.298 50.000 0.00 0.00 0.00 4.79
3168 7577 0.815095 CAAAAAGATACCCGCACCCC 59.185 55.000 0.00 0.00 0.00 4.95
3169 7578 0.172578 GCAAAAAGATACCCGCACCC 59.827 55.000 0.00 0.00 0.00 4.61
3170 7579 0.885196 TGCAAAAAGATACCCGCACC 59.115 50.000 0.00 0.00 0.00 5.01
3171 7580 2.715737 TTGCAAAAAGATACCCGCAC 57.284 45.000 0.00 0.00 0.00 5.34
3172 7581 3.735237 TTTTGCAAAAAGATACCCGCA 57.265 38.095 21.94 0.00 0.00 5.69
3173 7582 4.956793 CAATTTTGCAAAAAGATACCCGC 58.043 39.130 27.10 0.00 0.00 6.13
3188 7597 5.469479 AGGAACGAAACTATGGCAATTTTG 58.531 37.500 0.00 0.00 0.00 2.44
3189 7598 5.722021 AGGAACGAAACTATGGCAATTTT 57.278 34.783 0.00 0.00 0.00 1.82
3190 7599 7.404671 AATAGGAACGAAACTATGGCAATTT 57.595 32.000 0.00 0.00 30.71 1.82
3191 7600 6.238374 CGAATAGGAACGAAACTATGGCAATT 60.238 38.462 0.00 0.00 30.71 2.32
3192 7601 5.236478 CGAATAGGAACGAAACTATGGCAAT 59.764 40.000 0.00 0.00 30.71 3.56
3193 7602 4.569162 CGAATAGGAACGAAACTATGGCAA 59.431 41.667 0.00 0.00 30.71 4.52
3194 7603 4.116961 CGAATAGGAACGAAACTATGGCA 58.883 43.478 0.00 0.00 30.71 4.92
3195 7604 4.117685 ACGAATAGGAACGAAACTATGGC 58.882 43.478 0.00 0.00 30.71 4.40
3196 7605 4.440103 CGACGAATAGGAACGAAACTATGG 59.560 45.833 0.00 0.00 30.71 2.74
3197 7606 4.440103 CCGACGAATAGGAACGAAACTATG 59.560 45.833 0.00 0.00 30.71 2.23
3198 7607 4.336433 TCCGACGAATAGGAACGAAACTAT 59.664 41.667 0.00 0.00 32.86 2.12
3199 7608 3.689161 TCCGACGAATAGGAACGAAACTA 59.311 43.478 0.00 0.00 32.86 2.24
3200 7609 2.489329 TCCGACGAATAGGAACGAAACT 59.511 45.455 0.00 0.00 32.86 2.66
3201 7610 2.867429 TCCGACGAATAGGAACGAAAC 58.133 47.619 0.00 0.00 32.86 2.78
3202 7611 3.788333 ATCCGACGAATAGGAACGAAA 57.212 42.857 0.00 0.00 40.32 3.46
3203 7612 6.558771 TTATATCCGACGAATAGGAACGAA 57.441 37.500 0.00 0.00 40.32 3.85
3204 7613 6.558771 TTTATATCCGACGAATAGGAACGA 57.441 37.500 0.00 0.00 40.32 3.85
3205 7614 6.194142 CGATTTATATCCGACGAATAGGAACG 59.806 42.308 0.00 0.00 40.32 3.95
3206 7615 6.471519 CCGATTTATATCCGACGAATAGGAAC 59.528 42.308 0.00 0.00 40.32 3.62
3207 7616 6.375174 TCCGATTTATATCCGACGAATAGGAA 59.625 38.462 0.00 0.00 40.32 3.36
3208 7617 5.882000 TCCGATTTATATCCGACGAATAGGA 59.118 40.000 0.00 0.00 41.30 2.94
3209 7618 6.127810 TCCGATTTATATCCGACGAATAGG 57.872 41.667 0.00 0.00 0.00 2.57
3210 7619 6.637254 CCATCCGATTTATATCCGACGAATAG 59.363 42.308 0.00 0.00 0.00 1.73
3211 7620 6.500910 CCATCCGATTTATATCCGACGAATA 58.499 40.000 0.00 0.00 0.00 1.75
3212 7621 5.348986 CCATCCGATTTATATCCGACGAAT 58.651 41.667 0.00 0.00 0.00 3.34
3213 7622 4.740268 CCATCCGATTTATATCCGACGAA 58.260 43.478 0.00 0.00 0.00 3.85
3214 7623 3.428452 GCCATCCGATTTATATCCGACGA 60.428 47.826 0.00 0.00 0.00 4.20
3215 7624 2.858344 GCCATCCGATTTATATCCGACG 59.142 50.000 0.00 0.00 0.00 5.12
3216 7625 3.118738 AGGCCATCCGATTTATATCCGAC 60.119 47.826 5.01 0.00 37.47 4.79
3217 7626 3.104512 AGGCCATCCGATTTATATCCGA 58.895 45.455 5.01 0.00 37.47 4.55
3218 7627 3.543680 AGGCCATCCGATTTATATCCG 57.456 47.619 5.01 0.00 37.47 4.18
3219 7628 7.119846 GCAATATAGGCCATCCGATTTATATCC 59.880 40.741 5.01 0.00 37.47 2.59
3220 7629 7.148573 CGCAATATAGGCCATCCGATTTATATC 60.149 40.741 5.01 0.00 37.47 1.63
3221 7630 6.650807 CGCAATATAGGCCATCCGATTTATAT 59.349 38.462 5.01 0.00 37.47 0.86
3222 7631 5.989168 CGCAATATAGGCCATCCGATTTATA 59.011 40.000 5.01 0.00 37.47 0.98
3223 7632 4.816385 CGCAATATAGGCCATCCGATTTAT 59.184 41.667 5.01 0.00 37.47 1.40
3224 7633 4.188462 CGCAATATAGGCCATCCGATTTA 58.812 43.478 5.01 0.00 37.47 1.40
3225 7634 3.009723 CGCAATATAGGCCATCCGATTT 58.990 45.455 5.01 0.00 37.47 2.17
3226 7635 2.632377 CGCAATATAGGCCATCCGATT 58.368 47.619 5.01 0.00 37.47 3.34
3227 7636 1.134401 CCGCAATATAGGCCATCCGAT 60.134 52.381 5.01 0.00 37.47 4.18
3228 7637 0.249120 CCGCAATATAGGCCATCCGA 59.751 55.000 5.01 0.00 37.47 4.55
3229 7638 0.744414 CCCGCAATATAGGCCATCCG 60.744 60.000 5.01 0.00 37.47 4.18
3230 7639 0.618458 TCCCGCAATATAGGCCATCC 59.382 55.000 5.01 0.00 0.00 3.51
3231 7640 2.292267 CATCCCGCAATATAGGCCATC 58.708 52.381 5.01 0.00 0.00 3.51
3232 7641 1.064463 CCATCCCGCAATATAGGCCAT 60.064 52.381 5.01 0.00 0.00 4.40
3233 7642 0.327924 CCATCCCGCAATATAGGCCA 59.672 55.000 5.01 0.00 0.00 5.36
3234 7643 1.032114 GCCATCCCGCAATATAGGCC 61.032 60.000 0.00 0.00 34.71 5.19
3235 7644 0.322456 TGCCATCCCGCAATATAGGC 60.322 55.000 0.00 0.00 40.93 3.93
3236 7645 1.679944 CCTGCCATCCCGCAATATAGG 60.680 57.143 0.00 0.00 38.56 2.57
3237 7646 1.278985 TCCTGCCATCCCGCAATATAG 59.721 52.381 0.00 0.00 38.56 1.31
3238 7647 1.357137 TCCTGCCATCCCGCAATATA 58.643 50.000 0.00 0.00 38.56 0.86
3239 7648 0.478072 TTCCTGCCATCCCGCAATAT 59.522 50.000 0.00 0.00 38.56 1.28
3240 7649 0.465460 GTTCCTGCCATCCCGCAATA 60.465 55.000 0.00 0.00 38.56 1.90
3241 7650 1.754234 GTTCCTGCCATCCCGCAAT 60.754 57.895 0.00 0.00 38.56 3.56
3242 7651 2.361104 GTTCCTGCCATCCCGCAA 60.361 61.111 0.00 0.00 38.56 4.85
3243 7652 3.645660 TGTTCCTGCCATCCCGCA 61.646 61.111 0.00 0.00 37.19 5.69
3244 7653 3.134127 GTGTTCCTGCCATCCCGC 61.134 66.667 0.00 0.00 0.00 6.13
3245 7654 2.438434 GGTGTTCCTGCCATCCCG 60.438 66.667 0.00 0.00 0.00 5.14
3246 7655 1.678970 GTGGTGTTCCTGCCATCCC 60.679 63.158 0.00 0.00 37.09 3.85
3247 7656 1.678970 GGTGGTGTTCCTGCCATCC 60.679 63.158 0.00 0.00 37.09 3.51
3248 7657 1.074775 TGGTGGTGTTCCTGCCATC 59.925 57.895 0.00 0.00 37.09 3.51
3249 7658 3.260297 TGGTGGTGTTCCTGCCAT 58.740 55.556 0.00 0.00 37.09 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.