Multiple sequence alignment - TraesCS1B01G389700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G389700 chr1B 100.000 3124 0 0 1 3124 623671470 623674593 0.000000e+00 5770.0
1 TraesCS1B01G389700 chr1B 86.367 1335 94 29 584 1864 623679072 623680372 0.000000e+00 1376.0
2 TraesCS1B01G389700 chr1B 84.488 664 69 21 1080 1710 623689458 623688796 2.650000e-175 625.0
3 TraesCS1B01G389700 chr1B 94.142 239 12 2 42 279 523223147 523222910 2.290000e-96 363.0
4 TraesCS1B01G389700 chr1B 90.708 226 19 2 278 501 415118198 415117973 1.820000e-77 300.0
5 TraesCS1B01G389700 chr1B 82.500 80 4 3 1948 2017 623680500 623680579 9.350000e-06 62.1
6 TraesCS1B01G389700 chr1B 89.796 49 4 1 2332 2380 623696287 623696240 9.350000e-06 62.1
7 TraesCS1B01G389700 chr1B 96.774 31 1 0 2329 2359 623683470 623683500 6.000000e-03 52.8
8 TraesCS1B01G389700 chr1D 87.764 2084 180 42 1035 3092 453181647 453183681 0.000000e+00 2366.0
9 TraesCS1B01G389700 chr1D 88.684 1299 78 32 579 1824 453199078 453200360 0.000000e+00 1520.0
10 TraesCS1B01G389700 chr1D 85.844 770 81 12 1109 1858 453134674 453135435 0.000000e+00 793.0
11 TraesCS1B01G389700 chr1D 83.333 660 72 18 1085 1710 453211145 453210490 2.700000e-160 575.0
12 TraesCS1B01G389700 chr1D 86.907 443 30 17 598 1030 453181173 453181597 3.650000e-129 472.0
13 TraesCS1B01G389700 chr1D 90.308 227 22 0 277 503 378551909 378551683 6.550000e-77 298.0
14 TraesCS1B01G389700 chr1D 84.689 209 27 4 2722 2928 453147068 453147273 1.470000e-48 204.0
15 TraesCS1B01G389700 chr1D 83.981 206 25 5 2260 2461 453146705 453146906 1.140000e-44 191.0
16 TraesCS1B01G389700 chr1D 83.750 80 3 3 1948 2017 453200481 453200560 2.010000e-07 67.6
17 TraesCS1B01G389700 chr1D 89.796 49 4 1 2332 2380 453216871 453216824 9.350000e-06 62.1
18 TraesCS1B01G389700 chr1A 89.228 1309 85 22 593 1859 547886203 547887497 0.000000e+00 1585.0
19 TraesCS1B01G389700 chr1A 84.031 764 80 18 1116 1858 547863933 547864675 0.000000e+00 697.0
20 TraesCS1B01G389700 chr1A 85.179 614 52 21 1133 1710 547908414 547907804 7.460000e-166 593.0
21 TraesCS1B01G389700 chr1A 93.878 245 12 3 36 279 62255703 62255945 1.770000e-97 366.0
22 TraesCS1B01G389700 chr1A 86.834 319 37 3 2722 3035 547881386 547881704 4.960000e-93 351.0
23 TraesCS1B01G389700 chr1A 100.000 31 0 0 1948 1978 547887607 547887637 1.210000e-04 58.4
24 TraesCS1B01G389700 chr7A 94.239 243 13 1 39 280 101271792 101272034 1.370000e-98 370.0
25 TraesCS1B01G389700 chr5B 94.215 242 12 2 39 279 694904994 694905234 4.920000e-98 368.0
26 TraesCS1B01G389700 chr5B 94.215 242 12 2 39 279 694992491 694992731 4.920000e-98 368.0
27 TraesCS1B01G389700 chr5B 94.215 242 12 2 39 279 695146645 695146885 4.920000e-98 368.0
28 TraesCS1B01G389700 chr5B 94.215 242 12 2 39 279 695192909 695193149 4.920000e-98 368.0
29 TraesCS1B01G389700 chr5B 93.802 242 13 2 39 279 694862673 694862913 2.290000e-96 363.0
30 TraesCS1B01G389700 chr5B 97.368 38 1 0 505 542 603638423 603638386 7.230000e-07 65.8
31 TraesCS1B01G389700 chr5B 88.889 54 2 3 505 557 496597870 496597920 2.600000e-06 63.9
32 TraesCS1B01G389700 chr4B 94.872 234 11 1 47 279 494016602 494016369 6.370000e-97 364.0
33 TraesCS1B01G389700 chr3B 92.000 225 18 0 277 501 353997184 353997408 1.810000e-82 316.0
34 TraesCS1B01G389700 chr3B 100.000 34 0 0 505 538 765327314 765327281 2.600000e-06 63.9
35 TraesCS1B01G389700 chr3D 91.228 228 20 0 274 501 236628798 236629025 8.410000e-81 311.0
36 TraesCS1B01G389700 chr6D 91.071 224 20 0 278 501 13155563 13155340 1.410000e-78 303.0
37 TraesCS1B01G389700 chr6D 89.362 235 22 3 270 502 38212742 38212975 3.050000e-75 292.0
38 TraesCS1B01G389700 chr2D 91.150 226 16 3 278 501 378729165 378729388 1.410000e-78 303.0
39 TraesCS1B01G389700 chr2D 90.308 227 22 0 275 501 78385386 78385612 6.550000e-77 298.0
40 TraesCS1B01G389700 chr4D 88.797 241 24 3 265 503 370775427 370775666 3.050000e-75 292.0
41 TraesCS1B01G389700 chr7B 97.368 38 1 0 505 542 233432392 233432355 7.230000e-07 65.8
42 TraesCS1B01G389700 chr2B 100.000 35 0 0 505 539 413454858 413454892 7.230000e-07 65.8
43 TraesCS1B01G389700 chr2B 100.000 34 0 0 505 538 181515138 181515105 2.600000e-06 63.9
44 TraesCS1B01G389700 chr2B 89.362 47 1 4 505 551 521509841 521509799 4.350000e-04 56.5
45 TraesCS1B01G389700 chr4A 97.297 37 1 0 505 541 31774216 31774252 2.600000e-06 63.9
46 TraesCS1B01G389700 chr5A 95.000 40 1 1 505 543 709492459 709492498 9.350000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G389700 chr1B 623671470 623674593 3123 False 5770.000000 5770 100.0000 1 3124 1 chr1B.!!$F1 3123
1 TraesCS1B01G389700 chr1B 623688796 623689458 662 True 625.000000 625 84.4880 1080 1710 1 chr1B.!!$R3 630
2 TraesCS1B01G389700 chr1B 623679072 623683500 4428 False 496.966667 1376 88.5470 584 2359 3 chr1B.!!$F2 1775
3 TraesCS1B01G389700 chr1D 453181173 453183681 2508 False 1419.000000 2366 87.3355 598 3092 2 chr1D.!!$F3 2494
4 TraesCS1B01G389700 chr1D 453199078 453200560 1482 False 793.800000 1520 86.2170 579 2017 2 chr1D.!!$F4 1438
5 TraesCS1B01G389700 chr1D 453134674 453135435 761 False 793.000000 793 85.8440 1109 1858 1 chr1D.!!$F1 749
6 TraesCS1B01G389700 chr1D 453210490 453211145 655 True 575.000000 575 83.3330 1085 1710 1 chr1D.!!$R2 625
7 TraesCS1B01G389700 chr1A 547886203 547887637 1434 False 821.700000 1585 94.6140 593 1978 2 chr1A.!!$F4 1385
8 TraesCS1B01G389700 chr1A 547863933 547864675 742 False 697.000000 697 84.0310 1116 1858 1 chr1A.!!$F2 742
9 TraesCS1B01G389700 chr1A 547907804 547908414 610 True 593.000000 593 85.1790 1133 1710 1 chr1A.!!$R1 577

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
640 656 0.103937 CGAGCAAGACCATCCTCTCC 59.896 60.0 0.0 0.0 0.00 3.71 F
1104 1248 0.104120 CACACAGACCTTCACCGTCA 59.896 55.0 0.0 0.0 32.41 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1941 2246 0.249398 ACGTGTGCTAACCAGGATCC 59.751 55.0 2.48 2.48 0.0 3.36 R
2776 5680 0.026674 CATGTGACAACATAGGCGCG 59.973 55.0 0.00 0.00 45.5 6.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
56 57 9.549078 CATAAGGTTTTCTTCTATACTTCCTCC 57.451 37.037 0.00 0.00 36.93 4.30
57 58 6.223351 AGGTTTTCTTCTATACTTCCTCCG 57.777 41.667 0.00 0.00 0.00 4.63
58 59 5.720520 AGGTTTTCTTCTATACTTCCTCCGT 59.279 40.000 0.00 0.00 0.00 4.69
59 60 6.212993 AGGTTTTCTTCTATACTTCCTCCGTT 59.787 38.462 0.00 0.00 0.00 4.44
60 61 6.877855 GGTTTTCTTCTATACTTCCTCCGTTT 59.122 38.462 0.00 0.00 0.00 3.60
61 62 7.389884 GGTTTTCTTCTATACTTCCTCCGTTTT 59.610 37.037 0.00 0.00 0.00 2.43
62 63 8.781196 GTTTTCTTCTATACTTCCTCCGTTTTT 58.219 33.333 0.00 0.00 0.00 1.94
72 73 7.668525 ACTTCCTCCGTTTTTATTTACTCTG 57.331 36.000 0.00 0.00 0.00 3.35
73 74 6.148976 ACTTCCTCCGTTTTTATTTACTCTGC 59.851 38.462 0.00 0.00 0.00 4.26
74 75 5.553123 TCCTCCGTTTTTATTTACTCTGCA 58.447 37.500 0.00 0.00 0.00 4.41
75 76 6.177610 TCCTCCGTTTTTATTTACTCTGCAT 58.822 36.000 0.00 0.00 0.00 3.96
76 77 7.332557 TCCTCCGTTTTTATTTACTCTGCATA 58.667 34.615 0.00 0.00 0.00 3.14
77 78 7.990886 TCCTCCGTTTTTATTTACTCTGCATAT 59.009 33.333 0.00 0.00 0.00 1.78
78 79 8.621286 CCTCCGTTTTTATTTACTCTGCATATT 58.379 33.333 0.00 0.00 0.00 1.28
92 93 7.697352 CTCTGCATATTAGAGTTGACTGAAG 57.303 40.000 5.84 0.00 37.48 3.02
93 94 7.175347 TCTGCATATTAGAGTTGACTGAAGT 57.825 36.000 0.00 0.00 0.00 3.01
94 95 7.261325 TCTGCATATTAGAGTTGACTGAAGTC 58.739 38.462 3.41 3.41 44.97 3.01
120 121 6.505044 ACTTCGTAAAGTTTGACCAAGTTT 57.495 33.333 0.00 0.00 43.28 2.66
121 122 7.614124 ACTTCGTAAAGTTTGACCAAGTTTA 57.386 32.000 0.00 0.00 43.28 2.01
122 123 8.217131 ACTTCGTAAAGTTTGACCAAGTTTAT 57.783 30.769 0.00 0.00 43.28 1.40
123 124 9.328845 ACTTCGTAAAGTTTGACCAAGTTTATA 57.671 29.630 0.00 0.00 43.28 0.98
124 125 9.807386 CTTCGTAAAGTTTGACCAAGTTTATAG 57.193 33.333 0.00 2.48 40.73 1.31
125 126 9.545105 TTCGTAAAGTTTGACCAAGTTTATAGA 57.455 29.630 0.00 4.22 40.73 1.98
126 127 9.545105 TCGTAAAGTTTGACCAAGTTTATAGAA 57.455 29.630 0.00 0.00 40.73 2.10
260 261 7.259290 CTTGGTCAAAGTTAGTAAAGCTTGA 57.741 36.000 0.00 0.00 0.00 3.02
261 262 6.613755 TGGTCAAAGTTAGTAAAGCTTGAC 57.386 37.500 5.74 5.74 0.00 3.18
262 263 6.354130 TGGTCAAAGTTAGTAAAGCTTGACT 58.646 36.000 20.48 20.48 0.00 3.41
263 264 6.826741 TGGTCAAAGTTAGTAAAGCTTGACTT 59.173 34.615 21.78 12.76 41.70 3.01
274 275 5.405935 AAAGCTTGACTTTGACCAAAACT 57.594 34.783 0.00 0.00 47.00 2.66
275 276 6.524101 AAAGCTTGACTTTGACCAAAACTA 57.476 33.333 0.00 0.00 47.00 2.24
276 277 6.524101 AAGCTTGACTTTGACCAAAACTAA 57.476 33.333 0.00 0.00 33.71 2.24
277 278 6.715347 AGCTTGACTTTGACCAAAACTAAT 57.285 33.333 0.00 0.00 0.00 1.73
278 279 7.817418 AGCTTGACTTTGACCAAAACTAATA 57.183 32.000 0.00 0.00 0.00 0.98
279 280 7.649057 AGCTTGACTTTGACCAAAACTAATAC 58.351 34.615 0.00 0.00 0.00 1.89
280 281 7.502561 AGCTTGACTTTGACCAAAACTAATACT 59.497 33.333 0.00 0.00 0.00 2.12
281 282 7.803659 GCTTGACTTTGACCAAAACTAATACTC 59.196 37.037 0.00 0.00 0.00 2.59
282 283 7.739498 TGACTTTGACCAAAACTAATACTCC 57.261 36.000 0.00 0.00 0.00 3.85
283 284 6.713450 TGACTTTGACCAAAACTAATACTCCC 59.287 38.462 0.00 0.00 0.00 4.30
284 285 6.849151 ACTTTGACCAAAACTAATACTCCCT 58.151 36.000 0.00 0.00 0.00 4.20
285 286 6.940867 ACTTTGACCAAAACTAATACTCCCTC 59.059 38.462 0.00 0.00 0.00 4.30
286 287 6.697641 TTGACCAAAACTAATACTCCCTCT 57.302 37.500 0.00 0.00 0.00 3.69
287 288 7.801893 TTGACCAAAACTAATACTCCCTCTA 57.198 36.000 0.00 0.00 0.00 2.43
288 289 7.989947 TGACCAAAACTAATACTCCCTCTAT 57.010 36.000 0.00 0.00 0.00 1.98
289 290 8.019656 TGACCAAAACTAATACTCCCTCTATC 57.980 38.462 0.00 0.00 0.00 2.08
290 291 7.070821 TGACCAAAACTAATACTCCCTCTATCC 59.929 40.741 0.00 0.00 0.00 2.59
291 292 6.906901 ACCAAAACTAATACTCCCTCTATCCA 59.093 38.462 0.00 0.00 0.00 3.41
292 293 7.572861 ACCAAAACTAATACTCCCTCTATCCAT 59.427 37.037 0.00 0.00 0.00 3.41
293 294 8.440771 CCAAAACTAATACTCCCTCTATCCATT 58.559 37.037 0.00 0.00 0.00 3.16
294 295 9.853177 CAAAACTAATACTCCCTCTATCCATTT 57.147 33.333 0.00 0.00 0.00 2.32
303 304 6.847036 ACTCCCTCTATCCATTTATATAGGGC 59.153 42.308 8.69 0.00 42.02 5.19
304 305 6.151049 TCCCTCTATCCATTTATATAGGGCC 58.849 44.000 0.00 0.00 42.02 5.80
305 306 6.066994 TCCCTCTATCCATTTATATAGGGCCT 60.067 42.308 12.58 12.58 42.02 5.19
306 307 7.133606 TCCCTCTATCCATTTATATAGGGCCTA 59.866 40.741 17.16 17.16 42.02 3.93
307 308 7.794683 CCCTCTATCCATTTATATAGGGCCTAA 59.205 40.741 18.91 7.61 38.39 2.69
308 309 9.398921 CCTCTATCCATTTATATAGGGCCTAAT 57.601 37.037 18.91 14.19 0.00 1.73
321 322 7.839680 ATAGGGCCTAATATGTTTTTCAAGG 57.160 36.000 18.91 0.00 0.00 3.61
322 323 4.405680 AGGGCCTAATATGTTTTTCAAGGC 59.594 41.667 2.82 4.75 42.45 4.35
323 324 4.405680 GGGCCTAATATGTTTTTCAAGGCT 59.594 41.667 0.84 0.00 42.65 4.58
324 325 5.596772 GGGCCTAATATGTTTTTCAAGGCTA 59.403 40.000 0.84 0.00 42.65 3.93
325 326 6.097696 GGGCCTAATATGTTTTTCAAGGCTAA 59.902 38.462 0.84 0.00 42.65 3.09
326 327 6.978659 GGCCTAATATGTTTTTCAAGGCTAAC 59.021 38.462 11.38 0.00 42.65 2.34
327 328 7.147897 GGCCTAATATGTTTTTCAAGGCTAACT 60.148 37.037 11.38 0.00 42.65 2.24
328 329 8.251026 GCCTAATATGTTTTTCAAGGCTAACTT 58.749 33.333 5.86 0.00 40.93 2.66
332 333 9.476202 AATATGTTTTTCAAGGCTAACTTTGAC 57.524 29.630 0.00 0.00 37.29 3.18
333 334 5.656480 TGTTTTTCAAGGCTAACTTTGACC 58.344 37.500 0.00 0.00 37.29 4.02
334 335 5.186021 TGTTTTTCAAGGCTAACTTTGACCA 59.814 36.000 0.00 0.00 37.29 4.02
335 336 6.127196 TGTTTTTCAAGGCTAACTTTGACCAT 60.127 34.615 0.00 0.00 37.29 3.55
336 337 7.068839 TGTTTTTCAAGGCTAACTTTGACCATA 59.931 33.333 0.00 0.00 37.29 2.74
337 338 6.569179 TTTCAAGGCTAACTTTGACCATAC 57.431 37.500 0.00 0.00 37.29 2.39
338 339 5.235850 TCAAGGCTAACTTTGACCATACA 57.764 39.130 0.00 0.00 37.29 2.29
339 340 5.815581 TCAAGGCTAACTTTGACCATACAT 58.184 37.500 0.00 0.00 37.29 2.29
340 341 6.245408 TCAAGGCTAACTTTGACCATACATT 58.755 36.000 0.00 0.00 37.29 2.71
341 342 7.398829 TCAAGGCTAACTTTGACCATACATTA 58.601 34.615 0.00 0.00 37.29 1.90
342 343 7.552687 TCAAGGCTAACTTTGACCATACATTAG 59.447 37.037 0.00 0.00 37.29 1.73
343 344 7.195374 AGGCTAACTTTGACCATACATTAGA 57.805 36.000 0.00 0.00 0.00 2.10
344 345 7.275920 AGGCTAACTTTGACCATACATTAGAG 58.724 38.462 0.00 0.00 0.00 2.43
345 346 6.017852 GGCTAACTTTGACCATACATTAGAGC 60.018 42.308 0.00 0.00 0.00 4.09
346 347 6.538742 GCTAACTTTGACCATACATTAGAGCA 59.461 38.462 0.00 0.00 0.00 4.26
347 348 7.065803 GCTAACTTTGACCATACATTAGAGCAA 59.934 37.037 0.00 0.00 0.00 3.91
348 349 7.944729 AACTTTGACCATACATTAGAGCAAT 57.055 32.000 0.00 0.00 0.00 3.56
350 351 9.461312 AACTTTGACCATACATTAGAGCAATAA 57.539 29.630 0.00 0.00 0.00 1.40
351 352 9.632638 ACTTTGACCATACATTAGAGCAATAAT 57.367 29.630 0.00 0.00 0.00 1.28
366 367 8.859236 AGAGCAATAATATATGACATGCAAGT 57.141 30.769 10.78 0.00 34.89 3.16
367 368 9.293404 AGAGCAATAATATATGACATGCAAGTT 57.707 29.630 10.78 0.00 34.89 2.66
376 377 3.963665 TGACATGCAAGTTACACAAAGC 58.036 40.909 0.00 0.00 0.00 3.51
377 378 3.379688 TGACATGCAAGTTACACAAAGCA 59.620 39.130 0.00 0.00 36.34 3.91
378 379 4.037803 TGACATGCAAGTTACACAAAGCAT 59.962 37.500 0.00 0.00 42.82 3.79
379 380 5.240403 TGACATGCAAGTTACACAAAGCATA 59.760 36.000 0.00 0.00 40.38 3.14
380 381 5.460646 ACATGCAAGTTACACAAAGCATAC 58.539 37.500 0.00 0.00 40.38 2.39
381 382 4.497473 TGCAAGTTACACAAAGCATACC 57.503 40.909 0.00 0.00 0.00 2.73
382 383 3.058570 TGCAAGTTACACAAAGCATACCG 60.059 43.478 0.00 0.00 0.00 4.02
383 384 3.058501 GCAAGTTACACAAAGCATACCGT 60.059 43.478 0.00 0.00 0.00 4.83
384 385 4.708601 CAAGTTACACAAAGCATACCGTC 58.291 43.478 0.00 0.00 0.00 4.79
385 386 3.997762 AGTTACACAAAGCATACCGTCA 58.002 40.909 0.00 0.00 0.00 4.35
386 387 4.382291 AGTTACACAAAGCATACCGTCAA 58.618 39.130 0.00 0.00 0.00 3.18
387 388 4.817464 AGTTACACAAAGCATACCGTCAAA 59.183 37.500 0.00 0.00 0.00 2.69
388 389 5.472137 AGTTACACAAAGCATACCGTCAAAT 59.528 36.000 0.00 0.00 0.00 2.32
389 390 4.846779 ACACAAAGCATACCGTCAAATT 57.153 36.364 0.00 0.00 0.00 1.82
390 391 4.794169 ACACAAAGCATACCGTCAAATTC 58.206 39.130 0.00 0.00 0.00 2.17
391 392 3.845775 CACAAAGCATACCGTCAAATTCG 59.154 43.478 0.00 0.00 0.00 3.34
392 393 3.500680 ACAAAGCATACCGTCAAATTCGT 59.499 39.130 0.00 0.00 0.00 3.85
393 394 4.691685 ACAAAGCATACCGTCAAATTCGTA 59.308 37.500 0.00 0.00 0.00 3.43
394 395 4.852609 AAGCATACCGTCAAATTCGTAC 57.147 40.909 0.00 0.00 0.00 3.67
395 396 2.855963 AGCATACCGTCAAATTCGTACG 59.144 45.455 9.53 9.53 36.42 3.67
396 397 2.599973 GCATACCGTCAAATTCGTACGT 59.400 45.455 16.05 0.00 34.90 3.57
397 398 3.540744 GCATACCGTCAAATTCGTACGTG 60.541 47.826 16.05 6.20 34.90 4.49
398 399 2.420628 ACCGTCAAATTCGTACGTGA 57.579 45.000 16.05 8.71 34.90 4.35
399 400 2.741612 ACCGTCAAATTCGTACGTGAA 58.258 42.857 16.05 3.23 34.90 3.18
400 401 3.122297 ACCGTCAAATTCGTACGTGAAA 58.878 40.909 16.05 2.41 34.90 2.69
401 402 3.182972 ACCGTCAAATTCGTACGTGAAAG 59.817 43.478 16.05 8.52 34.90 2.62
402 403 3.422603 CCGTCAAATTCGTACGTGAAAGG 60.423 47.826 16.05 13.44 34.90 3.11
403 404 3.426191 CGTCAAATTCGTACGTGAAAGGA 59.574 43.478 16.05 4.81 32.16 3.36
404 405 4.432503 CGTCAAATTCGTACGTGAAAGGAG 60.433 45.833 16.05 0.00 32.16 3.69
405 406 3.430895 TCAAATTCGTACGTGAAAGGAGC 59.569 43.478 16.05 0.00 0.00 4.70
406 407 3.314541 AATTCGTACGTGAAAGGAGCT 57.685 42.857 16.05 0.00 0.00 4.09
407 408 2.806608 TTCGTACGTGAAAGGAGCTT 57.193 45.000 16.05 0.00 0.00 3.74
408 409 2.342910 TCGTACGTGAAAGGAGCTTC 57.657 50.000 16.05 0.00 0.00 3.86
409 410 0.982673 CGTACGTGAAAGGAGCTTCG 59.017 55.000 7.22 0.00 0.00 3.79
410 411 1.347320 GTACGTGAAAGGAGCTTCGG 58.653 55.000 0.00 0.00 0.00 4.30
411 412 1.068055 GTACGTGAAAGGAGCTTCGGA 60.068 52.381 0.00 0.00 0.00 4.55
412 413 0.608640 ACGTGAAAGGAGCTTCGGAT 59.391 50.000 0.00 0.00 0.00 4.18
413 414 1.002366 CGTGAAAGGAGCTTCGGATG 58.998 55.000 0.00 0.00 0.00 3.51
414 415 1.404181 CGTGAAAGGAGCTTCGGATGA 60.404 52.381 0.00 0.00 0.00 2.92
415 416 2.739932 CGTGAAAGGAGCTTCGGATGAT 60.740 50.000 0.00 0.00 0.00 2.45
416 417 3.490933 CGTGAAAGGAGCTTCGGATGATA 60.491 47.826 0.00 0.00 0.00 2.15
417 418 4.636249 GTGAAAGGAGCTTCGGATGATAT 58.364 43.478 0.00 0.00 0.00 1.63
418 419 5.564848 CGTGAAAGGAGCTTCGGATGATATA 60.565 44.000 0.00 0.00 0.00 0.86
419 420 6.223852 GTGAAAGGAGCTTCGGATGATATAA 58.776 40.000 0.00 0.00 0.00 0.98
420 421 6.876257 GTGAAAGGAGCTTCGGATGATATAAT 59.124 38.462 0.00 0.00 0.00 1.28
421 422 7.389053 GTGAAAGGAGCTTCGGATGATATAATT 59.611 37.037 0.00 0.00 0.00 1.40
422 423 7.939039 TGAAAGGAGCTTCGGATGATATAATTT 59.061 33.333 0.00 0.00 0.00 1.82
423 424 8.697507 AAAGGAGCTTCGGATGATATAATTTT 57.302 30.769 0.00 0.00 0.00 1.82
424 425 7.913674 AGGAGCTTCGGATGATATAATTTTC 57.086 36.000 0.00 0.00 0.00 2.29
425 426 7.453393 AGGAGCTTCGGATGATATAATTTTCA 58.547 34.615 0.00 0.00 0.00 2.69
426 427 7.389053 AGGAGCTTCGGATGATATAATTTTCAC 59.611 37.037 0.00 0.00 0.00 3.18
427 428 7.173218 GGAGCTTCGGATGATATAATTTTCACA 59.827 37.037 0.00 0.00 0.00 3.58
428 429 8.627208 AGCTTCGGATGATATAATTTTCACAT 57.373 30.769 0.00 0.00 0.00 3.21
429 430 9.071276 AGCTTCGGATGATATAATTTTCACATT 57.929 29.630 0.00 0.00 0.00 2.71
472 473 8.871629 TTAACCTTATCAATAGTCAAAGGCAA 57.128 30.769 0.00 0.00 40.33 4.52
473 474 7.961326 AACCTTATCAATAGTCAAAGGCAAT 57.039 32.000 0.00 0.00 40.33 3.56
474 475 7.573968 ACCTTATCAATAGTCAAAGGCAATC 57.426 36.000 0.00 0.00 40.33 2.67
475 476 7.349598 ACCTTATCAATAGTCAAAGGCAATCT 58.650 34.615 0.00 0.00 40.33 2.40
476 477 7.500559 ACCTTATCAATAGTCAAAGGCAATCTC 59.499 37.037 0.00 0.00 40.33 2.75
477 478 5.998454 ATCAATAGTCAAAGGCAATCTCG 57.002 39.130 0.00 0.00 0.00 4.04
478 479 5.084818 TCAATAGTCAAAGGCAATCTCGA 57.915 39.130 0.00 0.00 0.00 4.04
479 480 5.487433 TCAATAGTCAAAGGCAATCTCGAA 58.513 37.500 0.00 0.00 0.00 3.71
480 481 5.937540 TCAATAGTCAAAGGCAATCTCGAAA 59.062 36.000 0.00 0.00 0.00 3.46
481 482 6.429692 TCAATAGTCAAAGGCAATCTCGAAAA 59.570 34.615 0.00 0.00 0.00 2.29
482 483 6.817765 ATAGTCAAAGGCAATCTCGAAAAA 57.182 33.333 0.00 0.00 0.00 1.94
483 484 5.712152 AGTCAAAGGCAATCTCGAAAAAT 57.288 34.783 0.00 0.00 0.00 1.82
484 485 5.464168 AGTCAAAGGCAATCTCGAAAAATG 58.536 37.500 0.00 0.00 0.00 2.32
485 486 5.010012 AGTCAAAGGCAATCTCGAAAAATGT 59.990 36.000 0.00 0.00 0.00 2.71
486 487 6.206634 AGTCAAAGGCAATCTCGAAAAATGTA 59.793 34.615 0.00 0.00 0.00 2.29
487 488 7.029563 GTCAAAGGCAATCTCGAAAAATGTAT 58.970 34.615 0.00 0.00 0.00 2.29
488 489 7.542130 GTCAAAGGCAATCTCGAAAAATGTATT 59.458 33.333 0.00 0.00 0.00 1.89
489 490 8.735315 TCAAAGGCAATCTCGAAAAATGTATTA 58.265 29.630 0.00 0.00 0.00 0.98
490 491 9.013490 CAAAGGCAATCTCGAAAAATGTATTAG 57.987 33.333 0.00 0.00 0.00 1.73
491 492 7.264373 AGGCAATCTCGAAAAATGTATTAGG 57.736 36.000 0.00 0.00 0.00 2.69
492 493 5.915196 GGCAATCTCGAAAAATGTATTAGGC 59.085 40.000 0.00 0.00 0.00 3.93
493 494 5.915196 GCAATCTCGAAAAATGTATTAGGCC 59.085 40.000 0.00 0.00 0.00 5.19
494 495 6.238759 GCAATCTCGAAAAATGTATTAGGCCT 60.239 38.462 11.78 11.78 0.00 5.19
495 496 7.682021 GCAATCTCGAAAAATGTATTAGGCCTT 60.682 37.037 12.58 0.00 0.00 4.35
496 497 8.836413 CAATCTCGAAAAATGTATTAGGCCTTA 58.164 33.333 12.58 0.11 0.00 2.69
497 498 9.574516 AATCTCGAAAAATGTATTAGGCCTTAT 57.425 29.630 12.58 10.82 0.00 1.73
509 510 8.847196 TGTATTAGGCCTTATATAGAGTATGCG 58.153 37.037 12.58 0.00 0.00 4.73
510 511 9.064706 GTATTAGGCCTTATATAGAGTATGCGA 57.935 37.037 12.58 0.00 0.00 5.10
511 512 7.949690 TTAGGCCTTATATAGAGTATGCGAA 57.050 36.000 12.58 0.00 0.00 4.70
512 513 6.210287 AGGCCTTATATAGAGTATGCGAAC 57.790 41.667 0.00 0.00 0.00 3.95
513 514 5.952947 AGGCCTTATATAGAGTATGCGAACT 59.047 40.000 0.00 0.00 0.00 3.01
514 515 7.117397 AGGCCTTATATAGAGTATGCGAACTA 58.883 38.462 0.00 0.00 0.00 2.24
515 516 7.614583 AGGCCTTATATAGAGTATGCGAACTAA 59.385 37.037 0.00 0.00 0.00 2.24
516 517 8.248945 GGCCTTATATAGAGTATGCGAACTAAA 58.751 37.037 0.00 0.00 0.00 1.85
517 518 9.804758 GCCTTATATAGAGTATGCGAACTAAAT 57.195 33.333 0.00 0.00 0.00 1.40
525 526 7.681903 AGAGTATGCGAACTAAATAAAAACGG 58.318 34.615 0.00 0.00 0.00 4.44
526 527 7.546667 AGAGTATGCGAACTAAATAAAAACGGA 59.453 33.333 0.00 0.00 0.00 4.69
527 528 7.681903 AGTATGCGAACTAAATAAAAACGGAG 58.318 34.615 0.00 0.00 0.00 4.63
528 529 5.285798 TGCGAACTAAATAAAAACGGAGG 57.714 39.130 0.00 0.00 0.00 4.30
529 530 4.154556 TGCGAACTAAATAAAAACGGAGGG 59.845 41.667 0.00 0.00 0.00 4.30
530 531 4.392754 GCGAACTAAATAAAAACGGAGGGA 59.607 41.667 0.00 0.00 0.00 4.20
531 532 5.446875 GCGAACTAAATAAAAACGGAGGGAG 60.447 44.000 0.00 0.00 0.00 4.30
532 533 5.640783 CGAACTAAATAAAAACGGAGGGAGT 59.359 40.000 0.00 0.00 0.00 3.85
533 534 6.813152 CGAACTAAATAAAAACGGAGGGAGTA 59.187 38.462 0.00 0.00 0.00 2.59
534 535 7.201470 CGAACTAAATAAAAACGGAGGGAGTAC 60.201 40.741 0.00 0.00 0.00 2.73
535 536 7.250032 ACTAAATAAAAACGGAGGGAGTACT 57.750 36.000 0.00 0.00 0.00 2.73
536 537 7.683578 ACTAAATAAAAACGGAGGGAGTACTT 58.316 34.615 0.00 0.00 0.00 2.24
537 538 8.815912 ACTAAATAAAAACGGAGGGAGTACTTA 58.184 33.333 0.00 0.00 0.00 2.24
538 539 9.657419 CTAAATAAAAACGGAGGGAGTACTTAA 57.343 33.333 0.00 0.00 0.00 1.85
544 545 8.502105 AAAACGGAGGGAGTACTTAATAAATG 57.498 34.615 0.00 0.00 0.00 2.32
545 546 6.170846 ACGGAGGGAGTACTTAATAAATGG 57.829 41.667 0.00 0.00 0.00 3.16
546 547 4.995487 CGGAGGGAGTACTTAATAAATGGC 59.005 45.833 0.00 0.00 0.00 4.40
547 548 5.454187 CGGAGGGAGTACTTAATAAATGGCA 60.454 44.000 0.00 0.00 0.00 4.92
548 549 6.543735 GGAGGGAGTACTTAATAAATGGCAT 58.456 40.000 0.00 0.00 0.00 4.40
549 550 7.004691 GGAGGGAGTACTTAATAAATGGCATT 58.995 38.462 6.96 6.96 0.00 3.56
550 551 7.505923 GGAGGGAGTACTTAATAAATGGCATTT 59.494 37.037 26.86 26.86 36.29 2.32
551 552 8.838649 AGGGAGTACTTAATAAATGGCATTTT 57.161 30.769 28.56 15.44 33.82 1.82
552 553 8.695456 AGGGAGTACTTAATAAATGGCATTTTG 58.305 33.333 28.56 16.09 33.82 2.44
553 554 8.474831 GGGAGTACTTAATAAATGGCATTTTGT 58.525 33.333 28.56 18.92 33.82 2.83
554 555 9.516314 GGAGTACTTAATAAATGGCATTTTGTC 57.484 33.333 28.56 11.60 33.82 3.18
562 563 8.687824 AATAAATGGCATTTTGTCTTTACTCG 57.312 30.769 28.56 0.00 33.82 4.18
563 564 5.957842 AATGGCATTTTGTCTTTACTCGA 57.042 34.783 6.96 0.00 0.00 4.04
564 565 5.957842 ATGGCATTTTGTCTTTACTCGAA 57.042 34.783 0.00 0.00 0.00 3.71
565 566 5.759506 TGGCATTTTGTCTTTACTCGAAA 57.240 34.783 0.00 0.00 0.00 3.46
566 567 5.757886 TGGCATTTTGTCTTTACTCGAAAG 58.242 37.500 0.00 0.00 45.23 2.62
628 634 3.114616 CCACGTGAGGCGAGCAAG 61.115 66.667 19.30 0.00 44.77 4.01
640 656 0.103937 CGAGCAAGACCATCCTCTCC 59.896 60.000 0.00 0.00 0.00 3.71
661 677 0.107831 TGACCCTTTCAACAGACGGG 59.892 55.000 0.00 0.00 40.79 5.28
663 679 1.971695 CCCTTTCAACAGACGGGCC 60.972 63.158 0.00 0.00 0.00 5.80
739 758 0.678395 CATCCCGATCCCACTCTCTG 59.322 60.000 0.00 0.00 0.00 3.35
835 885 3.949113 GAGGGCAATACCGGAATAAACAA 59.051 43.478 9.46 0.00 40.62 2.83
836 886 4.345854 AGGGCAATACCGGAATAAACAAA 58.654 39.130 9.46 0.00 40.62 2.83
837 887 4.773149 AGGGCAATACCGGAATAAACAAAA 59.227 37.500 9.46 0.00 40.62 2.44
838 888 4.865925 GGGCAATACCGGAATAAACAAAAC 59.134 41.667 9.46 0.00 40.62 2.43
839 889 4.865925 GGCAATACCGGAATAAACAAAACC 59.134 41.667 9.46 0.00 0.00 3.27
840 890 5.471257 GCAATACCGGAATAAACAAAACCA 58.529 37.500 9.46 0.00 0.00 3.67
841 891 5.927115 GCAATACCGGAATAAACAAAACCAA 59.073 36.000 9.46 0.00 0.00 3.67
842 892 6.128769 GCAATACCGGAATAAACAAAACCAAC 60.129 38.462 9.46 0.00 0.00 3.77
930 1001 0.322997 CCAAAATGGTCGGTGCCCTA 60.323 55.000 0.00 0.00 31.35 3.53
935 1006 1.502690 ATGGTCGGTGCCCTATGTTA 58.497 50.000 0.00 0.00 0.00 2.41
995 1073 1.102938 ATATACCTCTCCCCTCCCCC 58.897 60.000 0.00 0.00 0.00 5.40
1022 1100 2.955660 TCACTTCAAACAACCATCACCC 59.044 45.455 0.00 0.00 0.00 4.61
1070 1194 3.144506 CTCAAGACACAATCAGGCACTT 58.855 45.455 0.00 0.00 34.60 3.16
1075 1199 3.195610 AGACACAATCAGGCACTTATCGA 59.804 43.478 0.00 0.00 34.60 3.59
1099 1243 2.032178 GCAAGAACACACAGACCTTCAC 59.968 50.000 0.00 0.00 0.00 3.18
1104 1248 0.104120 CACACAGACCTTCACCGTCA 59.896 55.000 0.00 0.00 32.41 4.35
1105 1249 0.104304 ACACAGACCTTCACCGTCAC 59.896 55.000 0.00 0.00 32.41 3.67
1106 1250 0.389391 CACAGACCTTCACCGTCACT 59.611 55.000 0.00 0.00 32.41 3.41
1107 1251 0.389391 ACAGACCTTCACCGTCACTG 59.611 55.000 0.00 0.00 32.41 3.66
1120 1264 0.666274 GTCACTGTCGGCGTCAATGA 60.666 55.000 13.68 13.68 0.00 2.57
1152 1302 2.223735 GGAGTACATGATCCGCTTCGAA 60.224 50.000 0.00 0.00 0.00 3.71
1169 1325 1.229209 AAGGCCACTTCGAGGAGGA 60.229 57.895 15.15 0.00 28.54 3.71
1180 1348 3.663815 GAGGAGGACCCGAGCTCCA 62.664 68.421 8.47 0.00 40.87 3.86
1185 1353 3.371063 GACCCGAGCTCCACGACA 61.371 66.667 8.47 0.00 0.00 4.35
1246 1426 3.714871 GAGCAGGAGCAGAGCGTCC 62.715 68.421 0.00 0.00 45.49 4.79
1473 1695 3.493873 GGAACAAGAAGAACCAGTACCGT 60.494 47.826 0.00 0.00 0.00 4.83
1743 1980 1.192803 GGGACGAGGAGGAAACAGGT 61.193 60.000 0.00 0.00 0.00 4.00
1830 2073 1.219522 CGGTCGACAACACCTTGGAC 61.220 60.000 18.91 0.00 0.00 4.02
1834 2077 0.238289 CGACAACACCTTGGACATGC 59.762 55.000 0.00 0.00 0.00 4.06
1862 2105 1.320344 CCGGGACAGAGACGATTGGA 61.320 60.000 0.00 0.00 0.00 3.53
1900 2177 7.273815 GCTAGACAAATGTTAGACTAGTGTCAC 59.726 40.741 0.00 0.00 45.20 3.67
1926 2231 3.119602 GCAGCAGATCAATCAACACACAT 60.120 43.478 0.00 0.00 0.00 3.21
1941 2246 1.336517 ACACATTGTACGACGGTCCTG 60.337 52.381 1.91 0.00 0.00 3.86
1981 2306 5.163478 ACGTCCTAGCTTCGGTTGTAAATAT 60.163 40.000 0.00 0.00 0.00 1.28
2004 2329 3.258123 CCACCCGATCAATGGAAAAGTTT 59.742 43.478 1.41 0.00 35.33 2.66
2066 2810 4.395959 ACGTCTAAGACAAAGTTGGTCA 57.604 40.909 12.97 0.00 37.74 4.02
2097 3269 2.194271 CGGATTTTACTCACGAGCTCC 58.806 52.381 8.47 0.00 0.00 4.70
2100 3272 0.389426 TTTTACTCACGAGCTCCGCC 60.389 55.000 8.47 0.00 43.32 6.13
2101 3273 1.529152 TTTACTCACGAGCTCCGCCA 61.529 55.000 8.47 0.00 43.32 5.69
2107 3279 0.739462 CACGAGCTCCGCCATTAACA 60.739 55.000 8.47 0.00 43.32 2.41
2139 3491 4.924305 ATTGCGCATTGGTATGAGAATT 57.076 36.364 12.75 0.00 33.89 2.17
2146 3498 4.280819 CATTGGTATGAGAATTGGGTGGT 58.719 43.478 0.00 0.00 33.37 4.16
2156 3508 5.045213 TGAGAATTGGGTGGTGTATGTGTAT 60.045 40.000 0.00 0.00 0.00 2.29
2158 3510 4.853468 ATTGGGTGGTGTATGTGTATGA 57.147 40.909 0.00 0.00 0.00 2.15
2169 3521 9.047371 TGGTGTATGTGTATGATAATTTTACCG 57.953 33.333 0.00 0.00 0.00 4.02
2184 3536 7.704789 AATTTTACCGTAATCTAACCGCTAG 57.295 36.000 0.00 0.00 0.00 3.42
2188 3540 3.131755 ACCGTAATCTAACCGCTAGCTTT 59.868 43.478 13.93 8.36 0.00 3.51
2197 3549 3.460857 ACCGCTAGCTTTCAGATTAGG 57.539 47.619 13.93 4.79 0.00 2.69
2201 3553 2.875317 GCTAGCTTTCAGATTAGGGCAC 59.125 50.000 7.70 0.00 0.00 5.01
2237 3596 3.287222 CGAAAATTTCTAGGATGCCCCA 58.713 45.455 4.09 0.00 37.41 4.96
2239 3598 4.022849 CGAAAATTTCTAGGATGCCCCATC 60.023 45.833 4.09 0.00 39.87 3.51
2301 4279 0.409092 TGGGACACCAAGATGGCAAT 59.591 50.000 0.00 0.00 45.87 3.56
2305 4283 1.474077 GACACCAAGATGGCAATGGTC 59.526 52.381 17.04 6.69 45.45 4.02
2306 4284 0.819582 CACCAAGATGGCAATGGTCC 59.180 55.000 17.04 0.00 45.45 4.46
2418 5322 4.751767 GCTTAGCAGCAGGGATAGATAT 57.248 45.455 0.00 0.00 46.49 1.63
2420 5324 5.596845 GCTTAGCAGCAGGGATAGATATAC 58.403 45.833 0.00 0.00 46.49 1.47
2468 5372 5.159399 TCACTTGTTTACTAACCGCAAAC 57.841 39.130 0.00 0.00 33.15 2.93
2485 5389 6.981559 ACCGCAAACACATATTTAACTTGTTT 59.018 30.769 0.00 0.00 40.22 2.83
2517 5421 8.219546 TGATGTTCAACTCATCTTGTGTTTTA 57.780 30.769 7.30 0.00 41.30 1.52
2525 5429 7.745620 ACTCATCTTGTGTTTTAACCCTAAG 57.254 36.000 0.00 0.00 0.00 2.18
2527 5431 6.303839 TCATCTTGTGTTTTAACCCTAAGCT 58.696 36.000 0.00 0.00 0.00 3.74
2605 5509 4.805719 GGAAGTTGCTCTTTTTGTTTCTGG 59.194 41.667 0.00 0.00 36.40 3.86
2606 5510 5.405935 AAGTTGCTCTTTTTGTTTCTGGT 57.594 34.783 0.00 0.00 31.57 4.00
2607 5511 5.405935 AGTTGCTCTTTTTGTTTCTGGTT 57.594 34.783 0.00 0.00 0.00 3.67
2643 5547 9.103861 ACTTGGTTTTTAATGTTACACATTTGG 57.896 29.630 7.40 0.00 45.80 3.28
2660 5564 7.753132 ACACATTTGGCGTTAATTGTAATACAG 59.247 33.333 0.00 0.00 0.00 2.74
2661 5565 7.219917 CACATTTGGCGTTAATTGTAATACAGG 59.780 37.037 0.00 0.00 0.00 4.00
2673 5577 8.574251 AATTGTAATACAGGCATGTAAGTTGA 57.426 30.769 16.04 2.76 44.85 3.18
2674 5578 7.987750 TTGTAATACAGGCATGTAAGTTGAA 57.012 32.000 16.04 2.68 44.85 2.69
2675 5579 8.574251 TTGTAATACAGGCATGTAAGTTGAAT 57.426 30.769 16.04 0.00 44.85 2.57
2676 5580 9.674068 TTGTAATACAGGCATGTAAGTTGAATA 57.326 29.630 16.04 0.00 44.85 1.75
2677 5581 9.845740 TGTAATACAGGCATGTAAGTTGAATAT 57.154 29.630 16.04 0.00 44.85 1.28
2681 5585 9.845740 ATACAGGCATGTAAGTTGAATATTACA 57.154 29.630 16.04 7.94 44.85 2.41
2683 5587 9.845740 ACAGGCATGTAAGTTGAATATTACATA 57.154 29.630 0.06 0.00 45.99 2.29
2685 5589 9.507329 AGGCATGTAAGTTGAATATTACATAGG 57.493 33.333 14.40 8.00 45.99 2.57
2686 5590 9.502091 GGCATGTAAGTTGAATATTACATAGGA 57.498 33.333 14.40 0.00 45.99 2.94
2699 5603 9.498176 AATATTACATAGGAAAACCGTACCATC 57.502 33.333 0.00 0.00 0.00 3.51
2703 5607 5.413523 ACATAGGAAAACCGTACCATCAAAC 59.586 40.000 0.00 0.00 0.00 2.93
2712 5616 2.667171 CGTACCATCAAACCTTTTGCCG 60.667 50.000 0.00 0.00 0.00 5.69
2716 5620 2.230992 CCATCAAACCTTTTGCCGATGA 59.769 45.455 0.00 0.00 33.66 2.92
2746 5650 9.487442 AAATATAAAATGTACCACTCCCACATT 57.513 29.630 0.00 0.00 43.01 2.71
2752 5656 2.113860 ACCACTCCCACATTTGATCG 57.886 50.000 0.00 0.00 0.00 3.69
2755 5659 1.131126 CACTCCCACATTTGATCGCAC 59.869 52.381 0.00 0.00 0.00 5.34
2756 5660 0.734889 CTCCCACATTTGATCGCACC 59.265 55.000 0.00 0.00 0.00 5.01
2759 5663 1.226379 CACATTTGATCGCACCGGC 60.226 57.895 0.00 0.00 0.00 6.13
2793 5697 0.601576 AACGCGCCTATGTTGTCACA 60.602 50.000 5.73 0.00 37.31 3.58
2802 5706 5.334491 CGCCTATGTTGTCACATGTTTACAA 60.334 40.000 16.08 16.08 43.92 2.41
2812 5716 6.033341 GTCACATGTTTACAACTGCAAGAAA 58.967 36.000 0.00 0.00 37.43 2.52
2814 5718 7.062839 GTCACATGTTTACAACTGCAAGAAAAA 59.937 33.333 0.00 0.00 37.43 1.94
2841 5746 3.302740 GCTCTTGTTCAGTCACTTGTTCG 60.303 47.826 0.00 0.00 0.00 3.95
2857 5762 3.849911 TGTTCGGAGTTGCTATCTTGAG 58.150 45.455 0.00 0.00 0.00 3.02
2885 5790 3.444742 TCCATGAGTTCAATGTGCCATTC 59.555 43.478 0.00 0.00 0.00 2.67
2886 5791 3.193903 CCATGAGTTCAATGTGCCATTCA 59.806 43.478 0.00 0.00 0.00 2.57
2909 5814 4.178956 AGAAGGTTGCTCTTGGGTAAAA 57.821 40.909 0.00 0.00 0.00 1.52
2920 5825 6.374333 TGCTCTTGGGTAAAATAGTTTAGCTG 59.626 38.462 20.33 12.82 43.93 4.24
2921 5826 6.374613 GCTCTTGGGTAAAATAGTTTAGCTGT 59.625 38.462 20.33 0.00 43.93 4.40
2922 5827 7.551617 GCTCTTGGGTAAAATAGTTTAGCTGTA 59.448 37.037 20.33 8.26 43.93 2.74
2927 5832 8.322828 TGGGTAAAATAGTTTAGCTGTATCACA 58.677 33.333 20.33 8.56 43.93 3.58
2928 5833 8.610035 GGGTAAAATAGTTTAGCTGTATCACAC 58.390 37.037 20.33 1.84 43.93 3.82
2945 5850 2.047274 CCGTCCATTCGGCAGTGT 60.047 61.111 0.00 0.00 43.96 3.55
2950 5855 2.693762 CCATTCGGCAGTGTGGCAG 61.694 63.158 1.12 0.00 43.94 4.85
2951 5856 3.058160 ATTCGGCAGTGTGGCAGC 61.058 61.111 1.12 0.00 43.94 5.25
2962 5867 0.472044 TGTGGCAGCTGGAGTTTGTA 59.528 50.000 17.12 0.00 0.00 2.41
2964 5869 1.266989 GTGGCAGCTGGAGTTTGTAAC 59.733 52.381 17.12 0.00 0.00 2.50
2971 5876 2.615747 GCTGGAGTTTGTAACCTCTCCC 60.616 54.545 7.46 0.00 43.91 4.30
2972 5877 2.637872 CTGGAGTTTGTAACCTCTCCCA 59.362 50.000 7.46 0.00 43.91 4.37
2974 5879 2.290134 GGAGTTTGTAACCTCTCCCACC 60.290 54.545 0.00 0.00 40.14 4.61
2975 5880 2.370849 GAGTTTGTAACCTCTCCCACCA 59.629 50.000 0.00 0.00 0.00 4.17
2978 5883 2.335681 TGTAACCTCTCCCACCATCA 57.664 50.000 0.00 0.00 0.00 3.07
3020 5925 2.083628 CCTATCCGTCTGGGTTAGGT 57.916 55.000 8.20 0.00 46.72 3.08
3029 5934 3.738281 CGTCTGGGTTAGGTGATGACATC 60.738 52.174 8.59 8.59 0.00 3.06
3031 5936 2.430694 CTGGGTTAGGTGATGACATCGA 59.569 50.000 10.79 0.00 31.58 3.59
3033 5938 2.483188 GGGTTAGGTGATGACATCGACC 60.483 54.545 20.61 20.61 37.43 4.79
3036 5941 4.098960 GGTTAGGTGATGACATCGACCTAA 59.901 45.833 30.83 30.83 43.11 2.69
3037 5942 5.221461 GGTTAGGTGATGACATCGACCTAAT 60.221 44.000 33.43 20.51 44.72 1.73
3038 5943 4.327982 AGGTGATGACATCGACCTAATG 57.672 45.455 25.59 0.00 38.30 1.90
3045 5950 4.138487 GACATCGACCTAATGTCCCTTT 57.862 45.455 5.02 0.00 44.68 3.11
3050 5956 1.835531 GACCTAATGTCCCTTTCCCGA 59.164 52.381 0.00 0.00 38.09 5.14
3068 5974 1.106285 GAGGCTGGGTTAAGCAATGG 58.894 55.000 7.03 0.00 45.43 3.16
3074 5980 1.272425 TGGGTTAAGCAATGGGTCCAG 60.272 52.381 7.03 0.00 0.00 3.86
3078 5984 0.034186 TAAGCAATGGGTCCAGCCAG 60.034 55.000 3.49 0.00 39.65 4.85
3079 5985 1.792757 AAGCAATGGGTCCAGCCAGA 61.793 55.000 3.49 0.00 39.65 3.86
3080 5986 1.751927 GCAATGGGTCCAGCCAGAG 60.752 63.158 3.49 0.00 39.65 3.35
3082 5988 2.311854 AATGGGTCCAGCCAGAGGG 61.312 63.158 3.49 0.00 39.65 4.30
3083 5989 2.788230 AATGGGTCCAGCCAGAGGGA 62.788 60.000 3.49 0.00 39.65 4.20
3085 5991 2.674220 GGGTCCAGCCAGAGGGAAG 61.674 68.421 0.00 0.00 39.65 3.46
3094 6000 2.593925 CCAGAGGGAAGGCTCTTTTT 57.406 50.000 0.00 0.00 35.59 1.94
3095 6001 3.721087 CCAGAGGGAAGGCTCTTTTTA 57.279 47.619 0.00 0.00 35.59 1.52
3096 6002 4.242336 CCAGAGGGAAGGCTCTTTTTAT 57.758 45.455 0.00 0.00 35.59 1.40
3097 6003 4.203226 CCAGAGGGAAGGCTCTTTTTATC 58.797 47.826 0.00 0.00 35.59 1.75
3098 6004 4.080072 CCAGAGGGAAGGCTCTTTTTATCT 60.080 45.833 0.00 0.00 35.59 1.98
3099 6005 5.504853 CAGAGGGAAGGCTCTTTTTATCTT 58.495 41.667 0.00 0.00 0.00 2.40
3100 6006 5.356470 CAGAGGGAAGGCTCTTTTTATCTTG 59.644 44.000 0.00 0.00 0.00 3.02
3101 6007 4.019858 AGGGAAGGCTCTTTTTATCTTGC 58.980 43.478 0.00 0.00 0.00 4.01
3102 6008 4.019858 GGGAAGGCTCTTTTTATCTTGCT 58.980 43.478 0.00 0.00 0.00 3.91
3103 6009 4.097135 GGGAAGGCTCTTTTTATCTTGCTC 59.903 45.833 0.00 0.00 0.00 4.26
3104 6010 4.201861 GGAAGGCTCTTTTTATCTTGCTCG 60.202 45.833 0.00 0.00 0.00 5.03
3105 6011 2.680339 AGGCTCTTTTTATCTTGCTCGC 59.320 45.455 0.00 0.00 0.00 5.03
3106 6012 2.223363 GGCTCTTTTTATCTTGCTCGCC 60.223 50.000 0.00 0.00 0.00 5.54
3107 6013 2.223363 GCTCTTTTTATCTTGCTCGCCC 60.223 50.000 0.00 0.00 0.00 6.13
3108 6014 3.274288 CTCTTTTTATCTTGCTCGCCCT 58.726 45.455 0.00 0.00 0.00 5.19
3109 6015 3.686016 TCTTTTTATCTTGCTCGCCCTT 58.314 40.909 0.00 0.00 0.00 3.95
3110 6016 3.689649 TCTTTTTATCTTGCTCGCCCTTC 59.310 43.478 0.00 0.00 0.00 3.46
3111 6017 3.350219 TTTTATCTTGCTCGCCCTTCT 57.650 42.857 0.00 0.00 0.00 2.85
3112 6018 4.481368 TTTTATCTTGCTCGCCCTTCTA 57.519 40.909 0.00 0.00 0.00 2.10
3113 6019 4.689612 TTTATCTTGCTCGCCCTTCTAT 57.310 40.909 0.00 0.00 0.00 1.98
3114 6020 2.829741 ATCTTGCTCGCCCTTCTATC 57.170 50.000 0.00 0.00 0.00 2.08
3115 6021 0.385751 TCTTGCTCGCCCTTCTATCG 59.614 55.000 0.00 0.00 0.00 2.92
3116 6022 0.598680 CTTGCTCGCCCTTCTATCGG 60.599 60.000 0.00 0.00 0.00 4.18
3117 6023 2.028125 TTGCTCGCCCTTCTATCGGG 62.028 60.000 0.00 0.00 44.89 5.14
3118 6024 3.052081 CTCGCCCTTCTATCGGGG 58.948 66.667 0.00 0.00 42.22 5.73
3119 6025 1.530891 CTCGCCCTTCTATCGGGGA 60.531 63.158 1.80 0.00 45.18 4.81
3120 6026 0.900647 CTCGCCCTTCTATCGGGGAT 60.901 60.000 1.80 0.00 45.18 3.85
3121 6027 1.185618 TCGCCCTTCTATCGGGGATG 61.186 60.000 1.80 0.00 45.18 3.51
3122 6028 1.679898 GCCCTTCTATCGGGGATGG 59.320 63.158 1.80 0.00 45.18 3.51
3123 6029 0.836400 GCCCTTCTATCGGGGATGGA 60.836 60.000 1.80 0.00 45.18 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 9.549078 GGAGGAAGTATAGAAGAAAACCTTATG 57.451 37.037 0.00 0.00 34.68 1.90
31 32 8.422566 CGGAGGAAGTATAGAAGAAAACCTTAT 58.577 37.037 0.00 0.00 34.68 1.73
32 33 7.398332 ACGGAGGAAGTATAGAAGAAAACCTTA 59.602 37.037 0.00 0.00 34.68 2.69
33 34 6.212993 ACGGAGGAAGTATAGAAGAAAACCTT 59.787 38.462 0.00 0.00 37.93 3.50
34 35 5.720520 ACGGAGGAAGTATAGAAGAAAACCT 59.279 40.000 0.00 0.00 0.00 3.50
35 36 5.975282 ACGGAGGAAGTATAGAAGAAAACC 58.025 41.667 0.00 0.00 0.00 3.27
36 37 7.902387 AAACGGAGGAAGTATAGAAGAAAAC 57.098 36.000 0.00 0.00 0.00 2.43
37 38 8.913487 AAAAACGGAGGAAGTATAGAAGAAAA 57.087 30.769 0.00 0.00 0.00 2.29
46 47 9.379791 CAGAGTAAATAAAAACGGAGGAAGTAT 57.620 33.333 0.00 0.00 0.00 2.12
47 48 7.332678 GCAGAGTAAATAAAAACGGAGGAAGTA 59.667 37.037 0.00 0.00 0.00 2.24
48 49 6.148976 GCAGAGTAAATAAAAACGGAGGAAGT 59.851 38.462 0.00 0.00 0.00 3.01
49 50 6.148811 TGCAGAGTAAATAAAAACGGAGGAAG 59.851 38.462 0.00 0.00 0.00 3.46
50 51 5.998981 TGCAGAGTAAATAAAAACGGAGGAA 59.001 36.000 0.00 0.00 0.00 3.36
51 52 5.553123 TGCAGAGTAAATAAAAACGGAGGA 58.447 37.500 0.00 0.00 0.00 3.71
52 53 5.873179 TGCAGAGTAAATAAAAACGGAGG 57.127 39.130 0.00 0.00 0.00 4.30
68 69 7.264221 ACTTCAGTCAACTCTAATATGCAGAG 58.736 38.462 11.37 11.37 44.28 3.35
69 70 7.175347 ACTTCAGTCAACTCTAATATGCAGA 57.825 36.000 0.00 0.00 0.00 4.26
70 71 7.462109 GACTTCAGTCAACTCTAATATGCAG 57.538 40.000 1.86 0.00 44.18 4.41
98 99 9.807386 CTATAAACTTGGTCAAACTTTACGAAG 57.193 33.333 0.00 0.00 37.43 3.79
99 100 9.545105 TCTATAAACTTGGTCAAACTTTACGAA 57.455 29.630 0.00 0.00 0.00 3.85
100 101 9.545105 TTCTATAAACTTGGTCAAACTTTACGA 57.455 29.630 0.00 0.00 0.00 3.43
236 237 7.012421 AGTCAAGCTTTACTAACTTTGACCAAG 59.988 37.037 11.60 0.00 38.64 3.61
237 238 6.826741 AGTCAAGCTTTACTAACTTTGACCAA 59.173 34.615 11.60 0.00 0.00 3.67
238 239 6.354130 AGTCAAGCTTTACTAACTTTGACCA 58.646 36.000 11.60 0.00 0.00 4.02
239 240 6.862711 AGTCAAGCTTTACTAACTTTGACC 57.137 37.500 11.60 0.00 0.00 4.02
243 244 7.338449 TGGTCAAAGTCAAGCTTTACTAACTTT 59.662 33.333 13.52 12.46 44.95 2.66
244 245 6.826741 TGGTCAAAGTCAAGCTTTACTAACTT 59.173 34.615 13.52 7.69 44.95 2.66
245 246 6.354130 TGGTCAAAGTCAAGCTTTACTAACT 58.646 36.000 13.52 2.09 44.95 2.24
246 247 6.613755 TGGTCAAAGTCAAGCTTTACTAAC 57.386 37.500 13.52 11.58 44.95 2.34
247 248 7.633193 TTTGGTCAAAGTCAAGCTTTACTAA 57.367 32.000 13.52 1.03 44.95 2.24
248 249 7.338449 AGTTTTGGTCAAAGTCAAGCTTTACTA 59.662 33.333 13.52 0.00 44.95 1.82
249 250 6.152831 AGTTTTGGTCAAAGTCAAGCTTTACT 59.847 34.615 7.49 7.49 44.95 2.24
250 251 6.330278 AGTTTTGGTCAAAGTCAAGCTTTAC 58.670 36.000 2.40 2.40 44.95 2.01
251 252 6.524101 AGTTTTGGTCAAAGTCAAGCTTTA 57.476 33.333 0.00 0.00 44.95 1.85
253 254 6.524101 TTAGTTTTGGTCAAAGTCAAGCTT 57.476 33.333 0.00 0.00 39.52 3.74
254 255 6.715347 ATTAGTTTTGGTCAAAGTCAAGCT 57.285 33.333 0.00 0.00 30.16 3.74
255 256 7.649057 AGTATTAGTTTTGGTCAAAGTCAAGC 58.351 34.615 0.00 0.00 30.16 4.01
256 257 8.290325 GGAGTATTAGTTTTGGTCAAAGTCAAG 58.710 37.037 0.00 0.00 30.16 3.02
257 258 7.229907 GGGAGTATTAGTTTTGGTCAAAGTCAA 59.770 37.037 0.00 0.00 30.16 3.18
258 259 6.713450 GGGAGTATTAGTTTTGGTCAAAGTCA 59.287 38.462 0.00 0.00 30.16 3.41
259 260 6.940867 AGGGAGTATTAGTTTTGGTCAAAGTC 59.059 38.462 0.00 0.00 30.16 3.01
260 261 6.849151 AGGGAGTATTAGTTTTGGTCAAAGT 58.151 36.000 0.00 0.00 32.41 2.66
261 262 7.168905 AGAGGGAGTATTAGTTTTGGTCAAAG 58.831 38.462 0.00 0.00 0.00 2.77
262 263 7.086685 AGAGGGAGTATTAGTTTTGGTCAAA 57.913 36.000 0.00 0.00 0.00 2.69
263 264 6.697641 AGAGGGAGTATTAGTTTTGGTCAA 57.302 37.500 0.00 0.00 0.00 3.18
264 265 7.070821 GGATAGAGGGAGTATTAGTTTTGGTCA 59.929 40.741 0.00 0.00 0.00 4.02
265 266 7.070821 TGGATAGAGGGAGTATTAGTTTTGGTC 59.929 40.741 0.00 0.00 0.00 4.02
266 267 6.906901 TGGATAGAGGGAGTATTAGTTTTGGT 59.093 38.462 0.00 0.00 0.00 3.67
267 268 7.374975 TGGATAGAGGGAGTATTAGTTTTGG 57.625 40.000 0.00 0.00 0.00 3.28
268 269 9.853177 AAATGGATAGAGGGAGTATTAGTTTTG 57.147 33.333 0.00 0.00 0.00 2.44
282 283 8.798975 TTAGGCCCTATATAAATGGATAGAGG 57.201 38.462 0.00 2.18 39.53 3.69
295 296 9.533831 CCTTGAAAAACATATTAGGCCCTATAT 57.466 33.333 0.00 0.00 0.00 0.86
296 297 7.450323 GCCTTGAAAAACATATTAGGCCCTATA 59.550 37.037 0.00 0.00 40.77 1.31
297 298 6.267699 GCCTTGAAAAACATATTAGGCCCTAT 59.732 38.462 0.00 0.00 40.77 2.57
298 299 5.596772 GCCTTGAAAAACATATTAGGCCCTA 59.403 40.000 0.00 0.00 40.77 3.53
299 300 4.405680 GCCTTGAAAAACATATTAGGCCCT 59.594 41.667 0.00 0.00 40.77 5.19
300 301 4.405680 AGCCTTGAAAAACATATTAGGCCC 59.594 41.667 0.00 0.00 45.01 5.80
301 302 5.598416 AGCCTTGAAAAACATATTAGGCC 57.402 39.130 0.00 0.00 45.01 5.19
302 303 7.772166 AGTTAGCCTTGAAAAACATATTAGGC 58.228 34.615 0.00 0.00 44.55 3.93
306 307 9.476202 GTCAAAGTTAGCCTTGAAAAACATATT 57.524 29.630 0.00 0.00 32.32 1.28
307 308 8.088365 GGTCAAAGTTAGCCTTGAAAAACATAT 58.912 33.333 0.00 0.00 32.32 1.78
308 309 7.068839 TGGTCAAAGTTAGCCTTGAAAAACATA 59.931 33.333 0.00 0.00 32.32 2.29
309 310 6.127196 TGGTCAAAGTTAGCCTTGAAAAACAT 60.127 34.615 0.00 0.00 32.32 2.71
310 311 5.186021 TGGTCAAAGTTAGCCTTGAAAAACA 59.814 36.000 0.00 0.00 32.32 2.83
311 312 5.656480 TGGTCAAAGTTAGCCTTGAAAAAC 58.344 37.500 0.00 0.00 32.32 2.43
312 313 5.923733 TGGTCAAAGTTAGCCTTGAAAAA 57.076 34.783 0.00 0.00 32.32 1.94
313 314 6.547880 TGTATGGTCAAAGTTAGCCTTGAAAA 59.452 34.615 0.00 0.00 32.32 2.29
314 315 6.065374 TGTATGGTCAAAGTTAGCCTTGAAA 58.935 36.000 0.00 0.00 32.32 2.69
315 316 5.626142 TGTATGGTCAAAGTTAGCCTTGAA 58.374 37.500 0.00 0.00 32.32 2.69
316 317 5.235850 TGTATGGTCAAAGTTAGCCTTGA 57.764 39.130 0.00 0.00 32.32 3.02
317 318 6.515272 AATGTATGGTCAAAGTTAGCCTTG 57.485 37.500 0.00 0.00 32.32 3.61
318 319 7.630082 TCTAATGTATGGTCAAAGTTAGCCTT 58.370 34.615 0.00 0.00 33.79 4.35
319 320 7.195374 TCTAATGTATGGTCAAAGTTAGCCT 57.805 36.000 0.00 0.00 0.00 4.58
320 321 6.017852 GCTCTAATGTATGGTCAAAGTTAGCC 60.018 42.308 0.00 0.00 0.00 3.93
321 322 6.538742 TGCTCTAATGTATGGTCAAAGTTAGC 59.461 38.462 0.00 0.00 0.00 3.09
322 323 8.492673 TTGCTCTAATGTATGGTCAAAGTTAG 57.507 34.615 0.00 0.00 0.00 2.34
324 325 7.944729 ATTGCTCTAATGTATGGTCAAAGTT 57.055 32.000 0.00 0.00 0.00 2.66
325 326 9.632638 ATTATTGCTCTAATGTATGGTCAAAGT 57.367 29.630 0.00 0.00 0.00 2.66
340 341 9.948964 ACTTGCATGTCATATATTATTGCTCTA 57.051 29.630 0.00 0.00 0.00 2.43
341 342 8.859236 ACTTGCATGTCATATATTATTGCTCT 57.141 30.769 0.00 0.00 0.00 4.09
350 351 8.131100 GCTTTGTGTAACTTGCATGTCATATAT 58.869 33.333 5.61 0.00 38.04 0.86
351 352 7.120432 TGCTTTGTGTAACTTGCATGTCATATA 59.880 33.333 5.61 0.00 38.04 0.86
352 353 6.072008 TGCTTTGTGTAACTTGCATGTCATAT 60.072 34.615 5.61 0.00 38.04 1.78
353 354 5.240403 TGCTTTGTGTAACTTGCATGTCATA 59.760 36.000 5.61 0.00 38.04 2.15
354 355 4.037803 TGCTTTGTGTAACTTGCATGTCAT 59.962 37.500 5.61 0.00 38.04 3.06
355 356 3.379688 TGCTTTGTGTAACTTGCATGTCA 59.620 39.130 5.61 0.00 38.04 3.58
356 357 3.963665 TGCTTTGTGTAACTTGCATGTC 58.036 40.909 5.61 0.00 38.04 3.06
357 358 4.589216 ATGCTTTGTGTAACTTGCATGT 57.411 36.364 0.00 0.00 42.42 3.21
358 359 4.858692 GGTATGCTTTGTGTAACTTGCATG 59.141 41.667 8.29 0.00 43.24 4.06
359 360 4.379394 CGGTATGCTTTGTGTAACTTGCAT 60.379 41.667 0.00 0.00 44.54 3.96
360 361 3.058570 CGGTATGCTTTGTGTAACTTGCA 60.059 43.478 0.00 0.00 39.97 4.08
361 362 3.058501 ACGGTATGCTTTGTGTAACTTGC 60.059 43.478 0.00 0.00 38.04 4.01
362 363 4.212425 TGACGGTATGCTTTGTGTAACTTG 59.788 41.667 0.00 0.00 38.04 3.16
363 364 4.382291 TGACGGTATGCTTTGTGTAACTT 58.618 39.130 0.00 0.00 38.04 2.66
364 365 3.997762 TGACGGTATGCTTTGTGTAACT 58.002 40.909 0.00 0.00 38.04 2.24
365 366 4.735662 TTGACGGTATGCTTTGTGTAAC 57.264 40.909 0.00 0.00 37.35 2.50
366 367 5.950758 ATTTGACGGTATGCTTTGTGTAA 57.049 34.783 0.00 0.00 0.00 2.41
367 368 5.390040 CGAATTTGACGGTATGCTTTGTGTA 60.390 40.000 0.00 0.00 0.00 2.90
368 369 4.612712 CGAATTTGACGGTATGCTTTGTGT 60.613 41.667 0.00 0.00 0.00 3.72
369 370 3.845775 CGAATTTGACGGTATGCTTTGTG 59.154 43.478 0.00 0.00 0.00 3.33
370 371 3.500680 ACGAATTTGACGGTATGCTTTGT 59.499 39.130 0.00 0.00 34.93 2.83
371 372 4.078363 ACGAATTTGACGGTATGCTTTG 57.922 40.909 0.00 0.00 34.93 2.77
372 373 4.201647 CGTACGAATTTGACGGTATGCTTT 60.202 41.667 10.44 0.00 33.01 3.51
373 374 3.305094 CGTACGAATTTGACGGTATGCTT 59.695 43.478 10.44 0.00 33.01 3.91
374 375 2.855963 CGTACGAATTTGACGGTATGCT 59.144 45.455 10.44 0.00 33.01 3.79
375 376 2.599973 ACGTACGAATTTGACGGTATGC 59.400 45.455 24.41 0.00 40.84 3.14
376 377 3.853103 TCACGTACGAATTTGACGGTATG 59.147 43.478 24.41 4.75 40.84 2.39
377 378 4.095410 TCACGTACGAATTTGACGGTAT 57.905 40.909 24.41 0.00 40.84 2.73
378 379 3.550950 TCACGTACGAATTTGACGGTA 57.449 42.857 24.41 0.00 40.84 4.02
379 380 2.420628 TCACGTACGAATTTGACGGT 57.579 45.000 24.41 0.00 40.84 4.83
380 381 3.422603 CCTTTCACGTACGAATTTGACGG 60.423 47.826 24.41 13.22 40.84 4.79
381 382 3.426191 TCCTTTCACGTACGAATTTGACG 59.574 43.478 24.41 8.40 42.22 4.35
382 383 4.665897 GCTCCTTTCACGTACGAATTTGAC 60.666 45.833 24.41 0.00 0.00 3.18
383 384 3.430895 GCTCCTTTCACGTACGAATTTGA 59.569 43.478 24.41 12.38 0.00 2.69
384 385 3.432252 AGCTCCTTTCACGTACGAATTTG 59.568 43.478 24.41 9.92 0.00 2.32
385 386 3.660865 AGCTCCTTTCACGTACGAATTT 58.339 40.909 24.41 0.00 0.00 1.82
386 387 3.314541 AGCTCCTTTCACGTACGAATT 57.685 42.857 24.41 0.00 0.00 2.17
387 388 3.251571 GAAGCTCCTTTCACGTACGAAT 58.748 45.455 24.41 0.00 0.00 3.34
388 389 2.669364 GAAGCTCCTTTCACGTACGAA 58.331 47.619 24.41 3.37 0.00 3.85
389 390 1.400629 CGAAGCTCCTTTCACGTACGA 60.401 52.381 24.41 0.00 0.00 3.43
390 391 0.982673 CGAAGCTCCTTTCACGTACG 59.017 55.000 15.01 15.01 0.00 3.67
391 392 1.068055 TCCGAAGCTCCTTTCACGTAC 60.068 52.381 0.00 0.00 0.00 3.67
392 393 1.250328 TCCGAAGCTCCTTTCACGTA 58.750 50.000 0.00 0.00 0.00 3.57
393 394 0.608640 ATCCGAAGCTCCTTTCACGT 59.391 50.000 0.00 0.00 0.00 4.49
394 395 1.002366 CATCCGAAGCTCCTTTCACG 58.998 55.000 0.00 0.00 0.00 4.35
395 396 2.386661 TCATCCGAAGCTCCTTTCAC 57.613 50.000 0.00 0.00 0.00 3.18
396 397 4.963318 ATATCATCCGAAGCTCCTTTCA 57.037 40.909 0.00 0.00 0.00 2.69
397 398 7.913674 AATTATATCATCCGAAGCTCCTTTC 57.086 36.000 0.00 0.00 0.00 2.62
398 399 8.697507 AAAATTATATCATCCGAAGCTCCTTT 57.302 30.769 0.00 0.00 0.00 3.11
399 400 7.939039 TGAAAATTATATCATCCGAAGCTCCTT 59.061 33.333 0.00 0.00 0.00 3.36
400 401 7.389053 GTGAAAATTATATCATCCGAAGCTCCT 59.611 37.037 0.00 0.00 0.00 3.69
401 402 7.173218 TGTGAAAATTATATCATCCGAAGCTCC 59.827 37.037 0.00 0.00 0.00 4.70
402 403 8.087982 TGTGAAAATTATATCATCCGAAGCTC 57.912 34.615 0.00 0.00 0.00 4.09
403 404 8.627208 ATGTGAAAATTATATCATCCGAAGCT 57.373 30.769 0.00 0.00 0.00 3.74
446 447 9.474313 TTGCCTTTGACTATTGATAAGGTTAAT 57.526 29.630 0.00 0.00 38.08 1.40
447 448 8.871629 TTGCCTTTGACTATTGATAAGGTTAA 57.128 30.769 0.00 0.00 38.08 2.01
448 449 9.120538 GATTGCCTTTGACTATTGATAAGGTTA 57.879 33.333 0.00 0.00 38.08 2.85
449 450 7.836183 AGATTGCCTTTGACTATTGATAAGGTT 59.164 33.333 0.00 0.00 38.08 3.50
450 451 7.349598 AGATTGCCTTTGACTATTGATAAGGT 58.650 34.615 0.00 0.00 38.08 3.50
451 452 7.307632 CGAGATTGCCTTTGACTATTGATAAGG 60.308 40.741 0.00 0.00 38.68 2.69
452 453 7.439356 TCGAGATTGCCTTTGACTATTGATAAG 59.561 37.037 0.00 0.00 0.00 1.73
453 454 7.272244 TCGAGATTGCCTTTGACTATTGATAA 58.728 34.615 0.00 0.00 0.00 1.75
454 455 6.816136 TCGAGATTGCCTTTGACTATTGATA 58.184 36.000 0.00 0.00 0.00 2.15
455 456 5.674525 TCGAGATTGCCTTTGACTATTGAT 58.325 37.500 0.00 0.00 0.00 2.57
456 457 5.084818 TCGAGATTGCCTTTGACTATTGA 57.915 39.130 0.00 0.00 0.00 2.57
457 458 5.801350 TTCGAGATTGCCTTTGACTATTG 57.199 39.130 0.00 0.00 0.00 1.90
458 459 6.817765 TTTTCGAGATTGCCTTTGACTATT 57.182 33.333 0.00 0.00 0.00 1.73
459 460 6.817765 TTTTTCGAGATTGCCTTTGACTAT 57.182 33.333 0.00 0.00 0.00 2.12
460 461 6.206634 ACATTTTTCGAGATTGCCTTTGACTA 59.793 34.615 0.00 0.00 0.00 2.59
461 462 5.010012 ACATTTTTCGAGATTGCCTTTGACT 59.990 36.000 0.00 0.00 0.00 3.41
462 463 5.222631 ACATTTTTCGAGATTGCCTTTGAC 58.777 37.500 0.00 0.00 0.00 3.18
463 464 5.452078 ACATTTTTCGAGATTGCCTTTGA 57.548 34.783 0.00 0.00 0.00 2.69
464 465 7.816945 AATACATTTTTCGAGATTGCCTTTG 57.183 32.000 0.00 0.00 0.00 2.77
465 466 8.190784 CCTAATACATTTTTCGAGATTGCCTTT 58.809 33.333 0.00 0.00 0.00 3.11
466 467 7.682021 GCCTAATACATTTTTCGAGATTGCCTT 60.682 37.037 0.00 0.00 0.00 4.35
467 468 6.238759 GCCTAATACATTTTTCGAGATTGCCT 60.239 38.462 0.00 0.00 0.00 4.75
468 469 5.915196 GCCTAATACATTTTTCGAGATTGCC 59.085 40.000 0.00 0.00 0.00 4.52
469 470 5.915196 GGCCTAATACATTTTTCGAGATTGC 59.085 40.000 0.00 0.00 0.00 3.56
470 471 7.264373 AGGCCTAATACATTTTTCGAGATTG 57.736 36.000 1.29 0.00 0.00 2.67
471 472 7.881775 AAGGCCTAATACATTTTTCGAGATT 57.118 32.000 5.16 0.00 0.00 2.40
483 484 8.847196 CGCATACTCTATATAAGGCCTAATACA 58.153 37.037 5.16 0.00 0.00 2.29
484 485 9.064706 TCGCATACTCTATATAAGGCCTAATAC 57.935 37.037 5.16 0.00 0.00 1.89
485 486 9.636789 TTCGCATACTCTATATAAGGCCTAATA 57.363 33.333 5.16 3.84 0.00 0.98
486 487 8.414778 GTTCGCATACTCTATATAAGGCCTAAT 58.585 37.037 5.16 2.64 0.00 1.73
487 488 7.614583 AGTTCGCATACTCTATATAAGGCCTAA 59.385 37.037 5.16 0.00 0.00 2.69
488 489 7.117397 AGTTCGCATACTCTATATAAGGCCTA 58.883 38.462 5.16 0.00 0.00 3.93
489 490 5.952947 AGTTCGCATACTCTATATAAGGCCT 59.047 40.000 0.00 0.00 0.00 5.19
490 491 6.210287 AGTTCGCATACTCTATATAAGGCC 57.790 41.667 0.00 0.00 0.00 5.19
491 492 9.804758 ATTTAGTTCGCATACTCTATATAAGGC 57.195 33.333 0.00 0.00 0.00 4.35
499 500 8.810427 CCGTTTTTATTTAGTTCGCATACTCTA 58.190 33.333 0.00 0.00 0.00 2.43
500 501 7.546667 TCCGTTTTTATTTAGTTCGCATACTCT 59.453 33.333 0.00 0.00 0.00 3.24
501 502 7.678226 TCCGTTTTTATTTAGTTCGCATACTC 58.322 34.615 0.00 0.00 0.00 2.59
502 503 7.201582 CCTCCGTTTTTATTTAGTTCGCATACT 60.202 37.037 0.00 0.00 0.00 2.12
503 504 6.903479 CCTCCGTTTTTATTTAGTTCGCATAC 59.097 38.462 0.00 0.00 0.00 2.39
504 505 6.037391 CCCTCCGTTTTTATTTAGTTCGCATA 59.963 38.462 0.00 0.00 0.00 3.14
505 506 5.163693 CCCTCCGTTTTTATTTAGTTCGCAT 60.164 40.000 0.00 0.00 0.00 4.73
506 507 4.154556 CCCTCCGTTTTTATTTAGTTCGCA 59.845 41.667 0.00 0.00 0.00 5.10
507 508 4.392754 TCCCTCCGTTTTTATTTAGTTCGC 59.607 41.667 0.00 0.00 0.00 4.70
508 509 5.640783 ACTCCCTCCGTTTTTATTTAGTTCG 59.359 40.000 0.00 0.00 0.00 3.95
509 510 7.821359 AGTACTCCCTCCGTTTTTATTTAGTTC 59.179 37.037 0.00 0.00 0.00 3.01
510 511 7.683578 AGTACTCCCTCCGTTTTTATTTAGTT 58.316 34.615 0.00 0.00 0.00 2.24
511 512 7.250032 AGTACTCCCTCCGTTTTTATTTAGT 57.750 36.000 0.00 0.00 0.00 2.24
512 513 9.657419 TTAAGTACTCCCTCCGTTTTTATTTAG 57.343 33.333 0.00 0.00 0.00 1.85
518 519 8.953313 CATTTATTAAGTACTCCCTCCGTTTTT 58.047 33.333 0.00 0.00 0.00 1.94
519 520 7.555195 CCATTTATTAAGTACTCCCTCCGTTTT 59.445 37.037 0.00 0.00 0.00 2.43
520 521 7.052248 CCATTTATTAAGTACTCCCTCCGTTT 58.948 38.462 0.00 0.00 0.00 3.60
521 522 6.589135 CCATTTATTAAGTACTCCCTCCGTT 58.411 40.000 0.00 0.00 0.00 4.44
522 523 5.454329 GCCATTTATTAAGTACTCCCTCCGT 60.454 44.000 0.00 0.00 0.00 4.69
523 524 4.995487 GCCATTTATTAAGTACTCCCTCCG 59.005 45.833 0.00 0.00 0.00 4.63
524 525 5.937111 TGCCATTTATTAAGTACTCCCTCC 58.063 41.667 0.00 0.00 0.00 4.30
525 526 8.465273 AAATGCCATTTATTAAGTACTCCCTC 57.535 34.615 0.00 0.00 0.00 4.30
526 527 8.695456 CAAAATGCCATTTATTAAGTACTCCCT 58.305 33.333 2.54 0.00 0.00 4.20
527 528 8.474831 ACAAAATGCCATTTATTAAGTACTCCC 58.525 33.333 2.54 0.00 0.00 4.30
528 529 9.516314 GACAAAATGCCATTTATTAAGTACTCC 57.484 33.333 2.54 0.00 0.00 3.85
536 537 9.781834 CGAGTAAAGACAAAATGCCATTTATTA 57.218 29.630 2.54 0.00 0.00 0.98
537 538 8.519526 TCGAGTAAAGACAAAATGCCATTTATT 58.480 29.630 2.54 0.00 0.00 1.40
538 539 8.050778 TCGAGTAAAGACAAAATGCCATTTAT 57.949 30.769 2.54 0.00 0.00 1.40
539 540 7.441890 TCGAGTAAAGACAAAATGCCATTTA 57.558 32.000 2.54 0.00 0.00 1.40
540 541 6.325919 TCGAGTAAAGACAAAATGCCATTT 57.674 33.333 0.00 0.00 0.00 2.32
541 542 5.957842 TCGAGTAAAGACAAAATGCCATT 57.042 34.783 0.00 0.00 0.00 3.16
542 543 5.957842 TTCGAGTAAAGACAAAATGCCAT 57.042 34.783 0.00 0.00 0.00 4.40
543 544 5.529430 TCTTTCGAGTAAAGACAAAATGCCA 59.471 36.000 0.00 0.00 46.88 4.92
544 545 5.997385 TCTTTCGAGTAAAGACAAAATGCC 58.003 37.500 0.00 0.00 46.88 4.40
571 572 5.617252 TGCACCTACTAGTAGCTTGTTTTT 58.383 37.500 22.39 0.00 31.95 1.94
572 573 5.223449 TGCACCTACTAGTAGCTTGTTTT 57.777 39.130 22.39 0.00 31.95 2.43
573 574 4.884668 TGCACCTACTAGTAGCTTGTTT 57.115 40.909 22.39 1.42 31.95 2.83
574 575 4.466370 TGATGCACCTACTAGTAGCTTGTT 59.534 41.667 22.39 13.12 31.95 2.83
575 576 4.023980 TGATGCACCTACTAGTAGCTTGT 58.976 43.478 22.39 13.20 31.95 3.16
576 577 4.615949 CTGATGCACCTACTAGTAGCTTG 58.384 47.826 22.39 20.31 31.95 4.01
577 578 3.068873 GCTGATGCACCTACTAGTAGCTT 59.931 47.826 22.39 11.58 39.41 3.74
628 634 0.833949 GGGTCAAGGAGAGGATGGTC 59.166 60.000 0.00 0.00 0.00 4.02
661 677 2.674461 GATAAGGTCGGTCCGTCGGC 62.674 65.000 11.88 1.39 41.99 5.54
663 679 1.358046 GGATAAGGTCGGTCCGTCG 59.642 63.158 11.88 0.00 41.99 5.12
739 758 1.067495 AGTGACGCTAGTGGAAGAAGC 60.067 52.381 8.42 0.00 0.00 3.86
835 885 2.093921 CCTCGGGTTTGTTTGTTGGTTT 60.094 45.455 0.00 0.00 0.00 3.27
836 886 1.478916 CCTCGGGTTTGTTTGTTGGTT 59.521 47.619 0.00 0.00 0.00 3.67
837 887 1.107945 CCTCGGGTTTGTTTGTTGGT 58.892 50.000 0.00 0.00 0.00 3.67
838 888 0.249280 GCCTCGGGTTTGTTTGTTGG 60.249 55.000 0.00 0.00 0.00 3.77
839 889 0.249280 GGCCTCGGGTTTGTTTGTTG 60.249 55.000 0.00 0.00 0.00 3.33
840 890 1.396607 GGGCCTCGGGTTTGTTTGTT 61.397 55.000 0.84 0.00 0.00 2.83
841 891 1.830847 GGGCCTCGGGTTTGTTTGT 60.831 57.895 0.84 0.00 0.00 2.83
842 892 2.570284 GGGGCCTCGGGTTTGTTTG 61.570 63.158 0.84 0.00 0.00 2.93
884 954 1.476007 ATGGGGGCTAGCTCATCGAC 61.476 60.000 18.29 0.00 0.00 4.20
886 956 1.294780 GATGGGGGCTAGCTCATCG 59.705 63.158 18.29 0.00 0.00 3.84
930 1001 2.332514 GCGGCGCATGCATAACAT 59.667 55.556 29.21 0.00 45.35 2.71
963 1040 5.834204 GGAGAGGTATATATATGCTCCGGTT 59.166 44.000 16.30 0.00 32.15 4.44
995 1073 3.278574 TGGTTGTTTGAAGTGAGTCTGG 58.721 45.455 0.00 0.00 0.00 3.86
996 1074 4.576053 TGATGGTTGTTTGAAGTGAGTCTG 59.424 41.667 0.00 0.00 0.00 3.51
998 1076 4.261197 GGTGATGGTTGTTTGAAGTGAGTC 60.261 45.833 0.00 0.00 0.00 3.36
999 1077 3.632145 GGTGATGGTTGTTTGAAGTGAGT 59.368 43.478 0.00 0.00 0.00 3.41
1022 1100 3.541713 GGCTGGAGGTAGCTCGGG 61.542 72.222 15.43 11.25 43.22 5.14
1070 1194 3.005367 TCTGTGTGTTCTTGCTGTCGATA 59.995 43.478 0.00 0.00 0.00 2.92
1075 1199 1.210478 AGGTCTGTGTGTTCTTGCTGT 59.790 47.619 0.00 0.00 0.00 4.40
1104 1248 0.670546 CCTTCATTGACGCCGACAGT 60.671 55.000 0.00 0.00 0.00 3.55
1105 1249 1.970917 GCCTTCATTGACGCCGACAG 61.971 60.000 0.00 0.00 0.00 3.51
1106 1250 2.032634 GCCTTCATTGACGCCGACA 61.033 57.895 0.00 0.00 0.00 4.35
1107 1251 2.785258 GCCTTCATTGACGCCGAC 59.215 61.111 0.00 0.00 0.00 4.79
1120 1264 3.459063 GTACTCCCGGCTCGCCTT 61.459 66.667 6.35 0.00 0.00 4.35
1152 1302 1.985116 GTCCTCCTCGAAGTGGCCT 60.985 63.158 3.32 0.00 41.61 5.19
1169 1325 3.374402 CTGTCGTGGAGCTCGGGT 61.374 66.667 7.83 0.00 0.00 5.28
1293 1473 1.602605 CGGGAAAAAGAAGGCCGGT 60.603 57.895 1.90 0.00 0.00 5.28
1298 1478 1.923227 GCTCGCCGGGAAAAAGAAGG 61.923 60.000 2.18 0.00 0.00 3.46
1305 1485 3.605749 CTCCTTGCTCGCCGGGAAA 62.606 63.158 2.18 0.00 0.00 3.13
1618 1840 1.227943 AGAAGTTGAGCTTGGCGCA 60.228 52.632 10.83 0.00 42.61 6.09
1724 1961 1.192803 ACCTGTTTCCTCCTCGTCCC 61.193 60.000 0.00 0.00 0.00 4.46
1743 1980 2.997315 CCGTCCCAGAGCAGGTCA 60.997 66.667 1.66 0.00 0.00 4.02
1803 2040 4.373116 TTGTCGACCGGGAGCAGC 62.373 66.667 14.12 0.00 0.00 5.25
1834 2077 2.738521 CTGTCCCGGTGCGTGAAG 60.739 66.667 0.00 0.00 0.00 3.02
1862 2105 6.595682 ACATTTGTCTAGCACTAATAGGCAT 58.404 36.000 4.15 0.00 34.97 4.40
1926 2231 0.813184 GATCCAGGACCGTCGTACAA 59.187 55.000 0.00 0.00 0.00 2.41
1941 2246 0.249398 ACGTGTGCTAACCAGGATCC 59.751 55.000 2.48 2.48 0.00 3.36
1981 2306 2.041081 ACTTTTCCATTGATCGGGTGGA 59.959 45.455 8.88 8.88 40.13 4.02
2004 2329 5.475564 GGTCTCTTTGGCTATGGTTAAACAA 59.524 40.000 0.00 0.00 0.00 2.83
2066 2810 7.439056 TCGTGAGTAAAATCCGTTTAGTTCTTT 59.561 33.333 0.00 0.00 35.80 2.52
2097 3269 3.190314 TGTTAGCGTTTGTTAATGGCG 57.810 42.857 0.00 0.00 0.00 5.69
2139 3491 5.959583 TTATCATACACATACACCACCCA 57.040 39.130 0.00 0.00 0.00 4.51
2156 3508 7.927629 AGCGGTTAGATTACGGTAAAATTATCA 59.072 33.333 4.47 0.00 36.50 2.15
2158 3510 9.415544 CTAGCGGTTAGATTACGGTAAAATTAT 57.584 33.333 4.47 0.00 39.61 1.28
2169 3521 5.589192 TCTGAAAGCTAGCGGTTAGATTAC 58.411 41.667 9.55 0.00 37.01 1.89
2179 3531 2.139118 GCCCTAATCTGAAAGCTAGCG 58.861 52.381 9.55 0.00 0.00 4.26
2184 3536 2.426842 AGGTGCCCTAATCTGAAAGC 57.573 50.000 0.00 0.00 28.47 3.51
2188 3540 2.354704 CGTTGAAGGTGCCCTAATCTGA 60.355 50.000 0.00 0.00 31.13 3.27
2197 3549 1.239296 GGGTTACCGTTGAAGGTGCC 61.239 60.000 0.00 1.58 45.54 5.01
2262 3621 5.193527 TCCCATCCTAGAAATGAATCCAACA 59.806 40.000 6.64 0.00 0.00 3.33
2301 4279 0.961019 GCTTTCAAGTGCATGGACCA 59.039 50.000 14.38 0.00 0.00 4.02
2305 4283 2.642139 AATCGCTTTCAAGTGCATGG 57.358 45.000 0.00 0.00 36.50 3.66
2306 4284 2.919229 GGAAATCGCTTTCAAGTGCATG 59.081 45.455 13.26 0.00 42.17 4.06
2399 5303 5.506708 TCGTATATCTATCCCTGCTGCTAA 58.493 41.667 0.00 0.00 0.00 3.09
2485 5389 8.321353 ACAAGATGAGTTGAACATCATAAGGTA 58.679 33.333 0.00 0.00 44.29 3.08
2517 5421 6.419484 AAAATTGCTAAACAGCTTAGGGTT 57.581 33.333 0.00 0.00 37.98 4.11
2525 5429 5.644977 AGGGAGTAAAATTGCTAAACAGC 57.355 39.130 0.00 0.00 0.00 4.40
2580 5484 5.517770 CAGAAACAAAAAGAGCAACTTCCAG 59.482 40.000 0.00 0.00 37.93 3.86
2581 5485 5.410067 CAGAAACAAAAAGAGCAACTTCCA 58.590 37.500 0.00 0.00 37.93 3.53
2583 5487 5.410924 ACCAGAAACAAAAAGAGCAACTTC 58.589 37.500 0.00 0.00 37.93 3.01
2643 5547 5.816919 ACATGCCTGTATTACAATTAACGC 58.183 37.500 0.00 0.00 32.49 4.84
2660 5564 9.502091 TCCTATGTAATATTCAACTTACATGCC 57.498 33.333 14.86 0.00 44.29 4.40
2673 5577 9.498176 GATGGTACGGTTTTCCTATGTAATATT 57.502 33.333 0.00 0.00 37.95 1.28
2674 5578 8.653191 TGATGGTACGGTTTTCCTATGTAATAT 58.347 33.333 0.00 0.00 37.95 1.28
2675 5579 8.020777 TGATGGTACGGTTTTCCTATGTAATA 57.979 34.615 0.00 0.00 37.95 0.98
2676 5580 6.891388 TGATGGTACGGTTTTCCTATGTAAT 58.109 36.000 0.00 0.00 37.95 1.89
2677 5581 6.297080 TGATGGTACGGTTTTCCTATGTAA 57.703 37.500 0.00 0.00 37.95 2.41
2678 5582 5.936187 TGATGGTACGGTTTTCCTATGTA 57.064 39.130 0.00 0.00 37.95 2.29
2679 5583 4.829872 TGATGGTACGGTTTTCCTATGT 57.170 40.909 0.00 0.00 37.95 2.29
2680 5584 5.163693 GGTTTGATGGTACGGTTTTCCTATG 60.164 44.000 0.00 0.00 37.95 2.23
2681 5585 4.945543 GGTTTGATGGTACGGTTTTCCTAT 59.054 41.667 0.00 0.00 37.95 2.57
2682 5586 4.041938 AGGTTTGATGGTACGGTTTTCCTA 59.958 41.667 0.00 0.00 37.95 2.94
2683 5587 3.151554 GGTTTGATGGTACGGTTTTCCT 58.848 45.455 0.00 0.00 37.95 3.36
2684 5588 3.151554 AGGTTTGATGGTACGGTTTTCC 58.848 45.455 0.00 0.00 0.00 3.13
2685 5589 4.841443 AAGGTTTGATGGTACGGTTTTC 57.159 40.909 0.00 0.00 0.00 2.29
2686 5590 5.353111 CAAAAGGTTTGATGGTACGGTTTT 58.647 37.500 0.00 0.00 0.00 2.43
2687 5591 4.738243 GCAAAAGGTTTGATGGTACGGTTT 60.738 41.667 4.93 0.00 0.00 3.27
2688 5592 3.243602 GCAAAAGGTTTGATGGTACGGTT 60.244 43.478 4.93 0.00 0.00 4.44
2689 5593 2.295070 GCAAAAGGTTTGATGGTACGGT 59.705 45.455 4.93 0.00 0.00 4.83
2690 5594 2.352323 GGCAAAAGGTTTGATGGTACGG 60.352 50.000 4.93 0.00 0.00 4.02
2691 5595 2.667171 CGGCAAAAGGTTTGATGGTACG 60.667 50.000 4.93 0.00 0.00 3.67
2692 5596 2.554893 TCGGCAAAAGGTTTGATGGTAC 59.445 45.455 4.93 0.00 0.00 3.34
2695 5599 2.230992 TCATCGGCAAAAGGTTTGATGG 59.769 45.455 4.93 0.00 35.20 3.51
2722 5626 8.912988 CAAATGTGGGAGTGGTACATTTTATAT 58.087 33.333 10.75 0.00 46.87 0.86
2724 5628 6.951198 TCAAATGTGGGAGTGGTACATTTTAT 59.049 34.615 10.75 0.00 46.87 1.40
2725 5629 6.307776 TCAAATGTGGGAGTGGTACATTTTA 58.692 36.000 10.75 2.79 46.87 1.52
2726 5630 5.144100 TCAAATGTGGGAGTGGTACATTTT 58.856 37.500 10.75 0.00 46.87 1.82
2759 5663 2.892334 CGTTCTGGTTGCACCACCG 61.892 63.158 3.17 3.83 44.79 4.94
2767 5671 1.019278 ACATAGGCGCGTTCTGGTTG 61.019 55.000 8.36 8.35 0.00 3.77
2768 5672 0.321298 AACATAGGCGCGTTCTGGTT 60.321 50.000 8.36 11.72 0.00 3.67
2770 5674 1.019278 ACAACATAGGCGCGTTCTGG 61.019 55.000 8.36 5.86 0.00 3.86
2773 5677 0.094730 GTGACAACATAGGCGCGTTC 59.905 55.000 8.36 0.00 0.00 3.95
2775 5679 0.391130 ATGTGACAACATAGGCGCGT 60.391 50.000 8.43 8.08 45.41 6.01
2776 5680 0.026674 CATGTGACAACATAGGCGCG 59.973 55.000 0.00 0.00 45.50 6.86
2812 5716 5.128919 AGTGACTGAACAAGAGCAATCTTT 58.871 37.500 0.00 0.00 0.00 2.52
2814 5718 4.348863 AGTGACTGAACAAGAGCAATCT 57.651 40.909 0.00 0.00 0.00 2.40
2820 5724 3.246226 CCGAACAAGTGACTGAACAAGAG 59.754 47.826 0.00 0.00 0.00 2.85
2822 5726 3.194861 TCCGAACAAGTGACTGAACAAG 58.805 45.455 0.00 0.00 0.00 3.16
2824 5728 2.167693 ACTCCGAACAAGTGACTGAACA 59.832 45.455 0.00 0.00 0.00 3.18
2825 5729 2.822764 ACTCCGAACAAGTGACTGAAC 58.177 47.619 0.00 0.00 0.00 3.18
2829 5734 1.139058 AGCAACTCCGAACAAGTGACT 59.861 47.619 0.00 0.00 0.00 3.41
2841 5746 2.169352 TGAGCCTCAAGATAGCAACTCC 59.831 50.000 0.00 0.00 0.00 3.85
2885 5790 2.310538 ACCCAAGAGCAACCTTCTTTG 58.689 47.619 0.00 0.00 32.75 2.77
2886 5791 2.755952 ACCCAAGAGCAACCTTCTTT 57.244 45.000 0.00 0.00 32.75 2.52
2909 5814 5.451520 GGACGGTGTGATACAGCTAAACTAT 60.452 44.000 9.15 0.00 43.87 2.12
2920 5825 1.567504 CCGAATGGACGGTGTGATAC 58.432 55.000 0.00 0.00 46.70 2.24
2922 5827 4.932789 CCGAATGGACGGTGTGAT 57.067 55.556 0.00 0.00 46.70 3.06
2945 5850 1.604604 GTTACAAACTCCAGCTGCCA 58.395 50.000 8.66 0.00 0.00 4.92
2950 5855 2.701107 GGAGAGGTTACAAACTCCAGC 58.299 52.381 13.55 0.00 45.53 4.85
2962 5867 1.075536 GGTTTGATGGTGGGAGAGGTT 59.924 52.381 0.00 0.00 0.00 3.50
2964 5869 0.698238 TGGTTTGATGGTGGGAGAGG 59.302 55.000 0.00 0.00 0.00 3.69
2971 5876 2.669113 CGAAGCACATGGTTTGATGGTG 60.669 50.000 5.28 0.00 38.78 4.17
2972 5877 1.541147 CGAAGCACATGGTTTGATGGT 59.459 47.619 5.28 0.00 38.78 3.55
3031 5936 1.838077 CTCGGGAAAGGGACATTAGGT 59.162 52.381 0.00 0.00 0.00 3.08
3033 5938 1.475213 GCCTCGGGAAAGGGACATTAG 60.475 57.143 0.00 0.00 36.88 1.73
3036 5941 1.616628 AGCCTCGGGAAAGGGACAT 60.617 57.895 0.00 0.00 36.88 3.06
3037 5942 2.203938 AGCCTCGGGAAAGGGACA 60.204 61.111 0.00 0.00 36.88 4.02
3038 5943 2.269241 CAGCCTCGGGAAAGGGAC 59.731 66.667 0.00 0.00 36.88 4.46
3050 5956 0.324645 CCCATTGCTTAACCCAGCCT 60.325 55.000 0.00 0.00 39.25 4.58
3061 5967 2.207501 CTCTGGCTGGACCCATTGCT 62.208 60.000 0.00 0.00 37.83 3.91
3068 5974 2.674220 CCTTCCCTCTGGCTGGACC 61.674 68.421 0.00 0.00 39.84 4.46
3078 5984 4.097135 GCAAGATAAAAAGAGCCTTCCCTC 59.903 45.833 0.00 0.00 0.00 4.30
3079 5985 4.019858 GCAAGATAAAAAGAGCCTTCCCT 58.980 43.478 0.00 0.00 0.00 4.20
3080 5986 4.019858 AGCAAGATAAAAAGAGCCTTCCC 58.980 43.478 0.00 0.00 0.00 3.97
3082 5988 4.729170 GCGAGCAAGATAAAAAGAGCCTTC 60.729 45.833 0.00 0.00 0.00 3.46
3083 5989 3.127721 GCGAGCAAGATAAAAAGAGCCTT 59.872 43.478 0.00 0.00 0.00 4.35
3085 5991 2.223363 GGCGAGCAAGATAAAAAGAGCC 60.223 50.000 0.00 0.00 0.00 4.70
3087 5993 3.274288 AGGGCGAGCAAGATAAAAAGAG 58.726 45.455 0.00 0.00 0.00 2.85
3088 5994 3.350219 AGGGCGAGCAAGATAAAAAGA 57.650 42.857 0.00 0.00 0.00 2.52
3092 5998 4.632153 GATAGAAGGGCGAGCAAGATAAA 58.368 43.478 0.00 0.00 0.00 1.40
3093 5999 3.305403 CGATAGAAGGGCGAGCAAGATAA 60.305 47.826 0.00 0.00 39.76 1.75
3094 6000 2.229062 CGATAGAAGGGCGAGCAAGATA 59.771 50.000 0.00 0.00 39.76 1.98
3095 6001 1.000283 CGATAGAAGGGCGAGCAAGAT 60.000 52.381 0.00 0.00 39.76 2.40
3096 6002 0.385751 CGATAGAAGGGCGAGCAAGA 59.614 55.000 0.00 0.00 39.76 3.02
3097 6003 0.598680 CCGATAGAAGGGCGAGCAAG 60.599 60.000 0.00 0.00 39.76 4.01
3098 6004 1.441729 CCGATAGAAGGGCGAGCAA 59.558 57.895 0.00 0.00 39.76 3.91
3099 6005 2.498941 CCCGATAGAAGGGCGAGCA 61.499 63.158 0.00 0.00 42.77 4.26
3100 6006 2.340443 CCCGATAGAAGGGCGAGC 59.660 66.667 0.00 0.00 42.77 5.03


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.