Multiple sequence alignment - TraesCS1B01G388800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G388800 chr1B 100.000 9057 0 0 1 9057 622483806 622474750 0.000000e+00 16726.0
1 TraesCS1B01G388800 chr1B 91.506 624 45 1 1428 2043 426153464 426152841 0.000000e+00 852.0
2 TraesCS1B01G388800 chr1B 92.941 85 6 0 431 515 236961354 236961438 3.430000e-24 124.0
3 TraesCS1B01G388800 chr1B 91.765 85 6 1 431 515 583149605 583149522 5.750000e-22 117.0
4 TraesCS1B01G388800 chr1B 97.778 45 0 1 5896 5939 49598151 49598107 9.750000e-10 76.8
5 TraesCS1B01G388800 chr1A 93.399 7529 269 100 664 8123 547318830 547311461 0.000000e+00 10940.0
6 TraesCS1B01G388800 chr1A 87.365 926 43 25 8159 9057 547311463 547310585 0.000000e+00 994.0
7 TraesCS1B01G388800 chr1A 90.654 107 7 2 234 337 547319178 547319072 1.230000e-28 139.0
8 TraesCS1B01G388800 chr1A 85.526 76 7 4 1 74 547319248 547319175 9.750000e-10 76.8
9 TraesCS1B01G388800 chr1A 100.000 40 0 0 5896 5935 431027969 431027930 3.510000e-09 75.0
10 TraesCS1B01G388800 chr1A 97.674 43 0 1 5896 5937 481795669 481795627 1.260000e-08 73.1
11 TraesCS1B01G388800 chr1A 95.122 41 1 1 516 555 384955894 384955854 7.590000e-06 63.9
12 TraesCS1B01G388800 chr1D 96.036 3633 76 15 1299 4895 452493436 452489836 0.000000e+00 5849.0
13 TraesCS1B01G388800 chr1D 88.726 2936 205 65 6182 9057 452487949 452485080 0.000000e+00 3472.0
14 TraesCS1B01G388800 chr1D 95.796 999 36 3 4893 5889 452489601 452488607 0.000000e+00 1607.0
15 TraesCS1B01G388800 chr1D 90.440 523 15 16 664 1181 452494149 452493657 0.000000e+00 656.0
16 TraesCS1B01G388800 chr1D 92.737 179 12 1 64 242 238940209 238940386 3.240000e-64 257.0
17 TraesCS1B01G388800 chr1D 84.058 276 17 5 5933 6188 452488617 452488349 3.270000e-59 241.0
18 TraesCS1B01G388800 chr1D 93.600 125 8 0 1899 2023 23764869 23764993 4.320000e-43 187.0
19 TraesCS1B01G388800 chr1D 100.000 40 0 0 5896 5935 302911253 302911292 3.510000e-09 75.0
20 TraesCS1B01G388800 chr1D 97.619 42 0 1 5896 5936 326476813 326476772 4.540000e-08 71.3
21 TraesCS1B01G388800 chr1D 97.561 41 0 1 5896 5935 69108713 69108753 1.630000e-07 69.4
22 TraesCS1B01G388800 chr3D 86.885 549 51 12 2183 2724 531678291 531677757 6.050000e-166 595.0
23 TraesCS1B01G388800 chr3D 92.553 94 7 0 1058 1151 360935355 360935262 1.590000e-27 135.0
24 TraesCS1B01G388800 chr3D 92.857 84 5 1 1318 1401 360935108 360935026 4.440000e-23 121.0
25 TraesCS1B01G388800 chr3D 93.750 48 1 2 5889 5935 548808926 548808972 4.540000e-08 71.3
26 TraesCS1B01G388800 chr3D 95.238 42 2 0 516 557 354464799 354464840 5.870000e-07 67.6
27 TraesCS1B01G388800 chr3D 91.111 45 3 1 516 559 414526473 414526517 9.820000e-05 60.2
28 TraesCS1B01G388800 chr2D 80.101 789 93 26 1924 2684 69263563 69262811 6.230000e-146 529.0
29 TraesCS1B01G388800 chr2D 84.242 330 43 4 2661 2982 69262750 69262422 6.830000e-81 313.0
30 TraesCS1B01G388800 chr2D 94.048 168 10 0 68 235 516708479 516708312 1.170000e-63 255.0
31 TraesCS1B01G388800 chr2D 91.860 86 7 0 431 516 520503901 520503816 4.440000e-23 121.0
32 TraesCS1B01G388800 chr2D 90.698 86 8 0 431 516 418057550 418057635 2.070000e-21 115.0
33 TraesCS1B01G388800 chr2D 87.143 70 7 2 406 475 618530673 618530606 2.710000e-10 78.7
34 TraesCS1B01G388800 chr2D 95.745 47 0 2 5896 5940 473092286 473092332 3.510000e-09 75.0
35 TraesCS1B01G388800 chr2D 95.122 41 1 1 516 555 433155464 433155504 7.590000e-06 63.9
36 TraesCS1B01G388800 chr2D 90.909 44 4 0 516 559 192742954 192742997 9.820000e-05 60.2
37 TraesCS1B01G388800 chr6D 94.059 303 15 1 1505 1804 473431763 473432065 2.980000e-124 457.0
38 TraesCS1B01G388800 chr6D 93.023 172 12 0 67 238 392897143 392896972 1.510000e-62 252.0
39 TraesCS1B01G388800 chr6D 97.619 42 0 1 5895 5935 304102113 304102072 4.540000e-08 71.3
40 TraesCS1B01G388800 chr6D 97.561 41 0 1 5896 5935 397353680 397353720 1.630000e-07 69.4
41 TraesCS1B01G388800 chr6D 95.122 41 1 1 516 555 456157354 456157394 7.590000e-06 63.9
42 TraesCS1B01G388800 chr6B 91.935 310 25 0 1505 1814 384451408 384451099 1.400000e-117 435.0
43 TraesCS1B01G388800 chr6B 91.146 192 12 5 70 258 685530960 685531149 1.170000e-63 255.0
44 TraesCS1B01G388800 chr6B 86.486 222 22 6 2508 2724 101214561 101214779 4.230000e-58 237.0
45 TraesCS1B01G388800 chr6B 91.667 144 8 2 1899 2042 384451094 384450955 7.170000e-46 196.0
46 TraesCS1B01G388800 chr6B 94.690 113 5 1 4602 4714 57607187 57607076 3.360000e-39 174.0
47 TraesCS1B01G388800 chr6B 85.470 117 10 4 410 519 457400723 457400607 2.070000e-21 115.0
48 TraesCS1B01G388800 chr6B 96.667 60 2 0 1427 1486 384452115 384452056 5.790000e-17 100.0
49 TraesCS1B01G388800 chr6B 97.500 40 1 0 4627 4666 57607053 57607014 1.630000e-07 69.4
50 TraesCS1B01G388800 chr7B 90.268 298 23 5 4539 4835 105657660 105657952 1.430000e-102 385.0
51 TraesCS1B01G388800 chr7B 94.048 168 10 0 68 235 304265272 304265105 1.170000e-63 255.0
52 TraesCS1B01G388800 chr7B 94.690 113 5 1 4602 4714 531642204 531642315 3.360000e-39 174.0
53 TraesCS1B01G388800 chr7B 91.765 85 7 0 435 519 594954226 594954142 1.600000e-22 119.0
54 TraesCS1B01G388800 chr7B 90.244 82 7 1 2508 2589 500212939 500213019 1.240000e-18 106.0
55 TraesCS1B01G388800 chr7B 86.905 84 9 2 1301 1383 660362303 660362221 9.680000e-15 93.5
56 TraesCS1B01G388800 chr7B 85.366 82 11 1 1303 1383 699156021 699155940 5.830000e-12 84.2
57 TraesCS1B01G388800 chr7B 97.500 40 1 0 4627 4666 531642338 531642377 1.630000e-07 69.4
58 TraesCS1B01G388800 chr7D 94.220 173 7 3 64 235 593193103 593193273 2.510000e-65 261.0
59 TraesCS1B01G388800 chr7D 89.706 68 7 0 1315 1382 588067911 588067844 4.500000e-13 87.9
60 TraesCS1B01G388800 chr7D 100.000 40 0 0 5896 5935 366876794 366876755 3.510000e-09 75.0
61 TraesCS1B01G388800 chr7D 97.368 38 1 0 512 549 257766964 257767001 2.110000e-06 65.8
62 TraesCS1B01G388800 chr7D 95.122 41 2 0 512 552 307490300 307490260 2.110000e-06 65.8
63 TraesCS1B01G388800 chr5A 94.083 169 10 0 67 235 690414183 690414015 3.240000e-64 257.0
64 TraesCS1B01G388800 chr5A 100.000 41 0 0 5896 5936 621751643 621751603 9.750000e-10 76.8
65 TraesCS1B01G388800 chr5A 100.000 41 0 0 5896 5936 621752241 621752201 9.750000e-10 76.8
66 TraesCS1B01G388800 chr3B 92.655 177 13 0 70 246 571752690 571752514 1.170000e-63 255.0
67 TraesCS1B01G388800 chr3B 86.486 222 22 6 2508 2724 751096360 751096142 4.230000e-58 237.0
68 TraesCS1B01G388800 chr3B 92.553 94 7 0 1058 1151 470059339 470059246 1.590000e-27 135.0
69 TraesCS1B01G388800 chr3B 91.209 91 6 2 1312 1401 470059100 470059011 1.230000e-23 122.0
70 TraesCS1B01G388800 chr3B 91.765 85 7 0 431 515 457968766 457968682 1.600000e-22 119.0
71 TraesCS1B01G388800 chr3B 83.750 80 5 2 404 475 21947164 21947243 1.630000e-07 69.4
72 TraesCS1B01G388800 chr6A 91.005 189 13 4 71 258 47670172 47669987 1.510000e-62 252.0
73 TraesCS1B01G388800 chr6A 100.000 40 0 0 5896 5935 146490809 146490848 3.510000e-09 75.0
74 TraesCS1B01G388800 chr6A 100.000 40 0 0 5896 5935 383966693 383966654 3.510000e-09 75.0
75 TraesCS1B01G388800 chr5B 86.916 214 21 5 2516 2724 533440210 533439999 5.470000e-57 233.0
76 TraesCS1B01G388800 chr5B 86.036 222 23 6 2508 2724 466528860 466529078 1.970000e-56 231.0
77 TraesCS1B01G388800 chr5B 94.400 125 7 0 1899 2023 439600083 439599959 9.280000e-45 193.0
78 TraesCS1B01G388800 chr5B 90.805 87 6 2 431 516 202064905 202064990 2.070000e-21 115.0
79 TraesCS1B01G388800 chr5B 90.698 86 8 0 431 516 319375493 319375408 2.070000e-21 115.0
80 TraesCS1B01G388800 chr5B 85.417 96 13 1 420 515 1753043 1753137 2.080000e-16 99.0
81 TraesCS1B01G388800 chr5B 93.750 48 1 2 5896 5941 589369782 589369829 4.540000e-08 71.3
82 TraesCS1B01G388800 chr5B 85.507 69 9 1 407 475 645544926 645544993 4.540000e-08 71.3
83 TraesCS1B01G388800 chrUn 93.600 125 8 0 1899 2023 216239634 216239758 4.320000e-43 187.0
84 TraesCS1B01G388800 chrUn 93.600 125 8 0 1899 2023 315595282 315595406 4.320000e-43 187.0
85 TraesCS1B01G388800 chrUn 97.561 41 0 1 5896 5935 1035742 1035702 1.630000e-07 69.4
86 TraesCS1B01G388800 chrUn 97.561 41 0 1 5896 5935 11913492 11913532 1.630000e-07 69.4
87 TraesCS1B01G388800 chrUn 97.561 41 0 1 5896 5935 12159823 12159863 1.630000e-07 69.4
88 TraesCS1B01G388800 chrUn 97.561 41 0 1 5896 5935 17582148 17582108 1.630000e-07 69.4
89 TraesCS1B01G388800 chrUn 97.561 41 0 1 5896 5935 27366655 27366615 1.630000e-07 69.4
90 TraesCS1B01G388800 chrUn 97.561 41 0 1 5896 5935 42332029 42331989 1.630000e-07 69.4
91 TraesCS1B01G388800 chrUn 97.561 41 0 1 5896 5935 49493943 49493983 1.630000e-07 69.4
92 TraesCS1B01G388800 chrUn 97.561 41 0 1 5896 5935 70285888 70285848 1.630000e-07 69.4
93 TraesCS1B01G388800 chrUn 97.561 41 0 1 5896 5935 77490451 77490411 1.630000e-07 69.4
94 TraesCS1B01G388800 chr2B 93.600 125 8 0 1899 2023 41939728 41939604 4.320000e-43 187.0
95 TraesCS1B01G388800 chr2B 85.366 82 11 1 1303 1383 369808530 369808449 5.830000e-12 84.2
96 TraesCS1B01G388800 chr3A 92.553 94 7 0 1058 1151 481074833 481074740 1.590000e-27 135.0
97 TraesCS1B01G388800 chr3A 92.857 84 5 1 1318 1401 481074575 481074493 4.440000e-23 121.0
98 TraesCS1B01G388800 chr4D 100.000 40 0 0 5896 5935 12276199 12276160 3.510000e-09 75.0
99 TraesCS1B01G388800 chr4D 100.000 40 0 0 5896 5935 31822548 31822509 3.510000e-09 75.0
100 TraesCS1B01G388800 chr4D 97.561 41 0 1 5896 5935 486771046 486771086 1.630000e-07 69.4
101 TraesCS1B01G388800 chr4D 95.122 41 2 0 512 552 110432949 110432909 2.110000e-06 65.8
102 TraesCS1B01G388800 chr4D 84.286 70 4 4 410 475 428968613 428968679 2.730000e-05 62.1
103 TraesCS1B01G388800 chr7A 93.750 48 1 2 5896 5942 263316861 263316815 4.540000e-08 71.3
104 TraesCS1B01G388800 chr4B 97.619 42 0 1 5896 5936 174919626 174919667 4.540000e-08 71.3
105 TraesCS1B01G388800 chr4B 97.619 42 0 1 5896 5936 628065530 628065571 4.540000e-08 71.3
106 TraesCS1B01G388800 chr4A 93.750 48 1 2 5896 5941 115567195 115567242 4.540000e-08 71.3
107 TraesCS1B01G388800 chr4A 90.741 54 3 2 5896 5947 562284106 562284053 4.540000e-08 71.3
108 TraesCS1B01G388800 chr2A 92.157 51 3 1 5886 5935 241479299 241479349 4.540000e-08 71.3
109 TraesCS1B01G388800 chr5D 97.143 35 1 0 549 583 74844615 74844581 9.820000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G388800 chr1B 622474750 622483806 9056 True 16726.000000 16726 100.0000 1 9057 1 chr1B.!!$R4 9056
1 TraesCS1B01G388800 chr1B 426152841 426153464 623 True 852.000000 852 91.5060 1428 2043 1 chr1B.!!$R2 615
2 TraesCS1B01G388800 chr1A 547310585 547319248 8663 True 3037.450000 10940 89.2360 1 9057 4 chr1A.!!$R4 9056
3 TraesCS1B01G388800 chr1D 452485080 452494149 9069 True 2365.000000 5849 91.0112 664 9057 5 chr1D.!!$R2 8393
4 TraesCS1B01G388800 chr3D 531677757 531678291 534 True 595.000000 595 86.8850 2183 2724 1 chr3D.!!$R1 541
5 TraesCS1B01G388800 chr2D 69262422 69263563 1141 True 421.000000 529 82.1715 1924 2982 2 chr2D.!!$R4 1058
6 TraesCS1B01G388800 chr6B 384450955 384452115 1160 True 243.666667 435 93.4230 1427 2042 3 chr6B.!!$R3 615

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
528 637 0.978907 GGAGTACCTCCGTTCCCAAA 59.021 55.000 0.0 0.00 41.08 3.28 F
1425 1665 0.037734 CCCCCACGCCCCTATATTTC 59.962 60.000 0.0 0.00 0.00 2.17 F
1843 2717 2.034558 GTGACCCAGATTGGTTGTTGTG 59.965 50.000 0.0 0.00 39.24 3.33 F
2621 3523 4.951715 AGCATCATATCTCTTTTTGGCACA 59.048 37.500 0.0 0.00 0.00 4.57 F
3623 4624 3.812053 CCTGAGCACCACTTCTAATATGC 59.188 47.826 0.0 0.00 0.00 3.14 F
4006 5010 1.188863 GTTGATGCAGGCAGGGAATT 58.811 50.000 0.0 0.00 0.00 2.17 F
5202 6447 0.548926 TTCCAGTACAGCCCATCCCA 60.549 55.000 0.0 0.00 0.00 4.37 F
5753 7000 1.066143 GCCAGCAGCCAGTTAAGTCTA 60.066 52.381 0.0 0.00 34.35 2.59 F
6744 8427 1.004504 GTAAGCATCTAAGCTGCGTGC 60.005 52.381 0.0 3.89 45.89 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1978 2854 1.039068 CACCACACATTTGGCTCCAA 58.961 50.000 0.00 0.0 40.77 3.53 R
3283 4282 0.183492 AGAAAGGCAAGGCACAGACA 59.817 50.000 0.00 0.0 0.00 3.41 R
3289 4288 4.588528 AGAAACAATTAGAAAGGCAAGGCA 59.411 37.500 0.00 0.0 0.00 4.75 R
3977 4981 0.798776 CTGCATCAACGAACCAGACC 59.201 55.000 0.00 0.0 0.00 3.85 R
5148 6393 1.014564 GTGGCCTTTCCTCTTCGACG 61.015 60.000 3.32 0.0 35.26 5.12 R
5227 6472 1.699634 ACCAGTATCAGCCACAACAGT 59.300 47.619 0.00 0.0 0.00 3.55 R
6620 8302 0.044855 ACCCCACTGGCTAGAGGAAT 59.955 55.000 15.18 0.0 36.86 3.01 R
6757 8440 0.417437 TCTGACTCTTGGATGGGGGA 59.583 55.000 0.00 0.0 0.00 4.81 R
8440 10222 0.317160 TACAGTCACTGGTCCTTGCG 59.683 55.000 10.28 0.0 35.51 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 1.647346 CGTCAAGCACGGCCTATAAA 58.353 50.000 0.00 0.00 45.46 1.40
41 42 1.593006 CGTCAAGCACGGCCTATAAAG 59.407 52.381 0.00 0.00 45.46 1.85
42 43 2.629051 GTCAAGCACGGCCTATAAAGT 58.371 47.619 0.00 0.00 0.00 2.66
46 48 5.122711 GTCAAGCACGGCCTATAAAGTAAAA 59.877 40.000 0.00 0.00 0.00 1.52
47 49 5.883673 TCAAGCACGGCCTATAAAGTAAAAT 59.116 36.000 0.00 0.00 0.00 1.82
50 52 7.868906 AGCACGGCCTATAAAGTAAAATAAA 57.131 32.000 0.00 0.00 0.00 1.40
51 53 7.700505 AGCACGGCCTATAAAGTAAAATAAAC 58.299 34.615 0.00 0.00 0.00 2.01
52 54 7.555195 AGCACGGCCTATAAAGTAAAATAAACT 59.445 33.333 0.00 0.00 0.00 2.66
97 99 9.965902 ACTCCATCTGTTTCTAAATATTTGTCT 57.034 29.630 11.05 0.00 0.00 3.41
133 135 7.991084 ACAAATGGACTATCACATATGGATG 57.009 36.000 7.80 0.00 39.16 3.51
135 137 8.659527 ACAAATGGACTATCACATATGGATGTA 58.340 33.333 7.80 0.00 44.82 2.29
136 138 9.676861 CAAATGGACTATCACATATGGATGTAT 57.323 33.333 7.80 0.00 44.82 2.29
174 176 9.944376 TTAGAGTGTAGATTCACTTATTTTGCT 57.056 29.630 0.98 0.00 46.81 3.91
175 177 8.854614 AGAGTGTAGATTCACTTATTTTGCTT 57.145 30.769 0.98 0.00 46.81 3.91
176 178 8.940952 AGAGTGTAGATTCACTTATTTTGCTTC 58.059 33.333 0.98 0.00 46.81 3.86
177 179 7.743104 AGTGTAGATTCACTTATTTTGCTTCG 58.257 34.615 0.00 0.00 44.92 3.79
178 180 7.387948 AGTGTAGATTCACTTATTTTGCTTCGT 59.612 33.333 0.00 0.00 44.92 3.85
179 181 8.653338 GTGTAGATTCACTTATTTTGCTTCGTA 58.347 33.333 0.00 0.00 35.68 3.43
180 182 9.378551 TGTAGATTCACTTATTTTGCTTCGTAT 57.621 29.630 0.00 0.00 0.00 3.06
181 183 9.638300 GTAGATTCACTTATTTTGCTTCGTATG 57.362 33.333 0.00 0.00 0.00 2.39
182 184 8.268850 AGATTCACTTATTTTGCTTCGTATGT 57.731 30.769 0.00 0.00 0.00 2.29
183 185 9.378551 AGATTCACTTATTTTGCTTCGTATGTA 57.621 29.630 0.00 0.00 0.00 2.29
184 186 9.638300 GATTCACTTATTTTGCTTCGTATGTAG 57.362 33.333 0.00 0.00 0.00 2.74
185 187 8.542497 TTCACTTATTTTGCTTCGTATGTAGT 57.458 30.769 0.00 0.00 0.00 2.73
186 188 8.181487 TCACTTATTTTGCTTCGTATGTAGTC 57.819 34.615 0.00 0.00 0.00 2.59
187 189 7.815549 TCACTTATTTTGCTTCGTATGTAGTCA 59.184 33.333 0.00 0.00 0.00 3.41
188 190 7.898309 CACTTATTTTGCTTCGTATGTAGTCAC 59.102 37.037 0.00 0.00 0.00 3.67
189 191 7.817962 ACTTATTTTGCTTCGTATGTAGTCACT 59.182 33.333 0.00 0.00 0.00 3.41
190 192 8.542497 TTATTTTGCTTCGTATGTAGTCACTT 57.458 30.769 0.00 0.00 0.00 3.16
191 193 5.839262 TTTGCTTCGTATGTAGTCACTTG 57.161 39.130 0.00 0.00 0.00 3.16
192 194 4.514781 TGCTTCGTATGTAGTCACTTGT 57.485 40.909 0.00 0.00 0.00 3.16
193 195 4.878439 TGCTTCGTATGTAGTCACTTGTT 58.122 39.130 0.00 0.00 0.00 2.83
194 196 4.684242 TGCTTCGTATGTAGTCACTTGTTG 59.316 41.667 0.00 0.00 0.00 3.33
195 197 4.921515 GCTTCGTATGTAGTCACTTGTTGA 59.078 41.667 0.00 0.00 0.00 3.18
196 198 5.404366 GCTTCGTATGTAGTCACTTGTTGAA 59.596 40.000 0.00 0.00 35.39 2.69
197 199 6.073980 GCTTCGTATGTAGTCACTTGTTGAAA 60.074 38.462 0.00 0.00 35.39 2.69
198 200 7.360101 GCTTCGTATGTAGTCACTTGTTGAAAT 60.360 37.037 0.00 0.00 35.39 2.17
199 201 7.576750 TCGTATGTAGTCACTTGTTGAAATC 57.423 36.000 0.00 0.00 35.39 2.17
200 202 7.375834 TCGTATGTAGTCACTTGTTGAAATCT 58.624 34.615 0.00 0.00 35.39 2.40
201 203 8.517056 TCGTATGTAGTCACTTGTTGAAATCTA 58.483 33.333 0.00 0.00 35.39 1.98
202 204 9.302345 CGTATGTAGTCACTTGTTGAAATCTAT 57.698 33.333 0.00 0.00 35.39 1.98
211 213 9.996554 TCACTTGTTGAAATCTATAGAAAGACA 57.003 29.630 6.52 5.32 0.00 3.41
229 231 9.379791 AGAAAGACAAATATTTAGGAACGTAGG 57.620 33.333 0.00 0.00 0.00 3.18
230 232 8.502105 AAAGACAAATATTTAGGAACGTAGGG 57.498 34.615 0.00 0.00 0.00 3.53
231 233 7.427989 AGACAAATATTTAGGAACGTAGGGA 57.572 36.000 0.00 0.00 0.00 4.20
232 234 7.498443 AGACAAATATTTAGGAACGTAGGGAG 58.502 38.462 0.00 0.00 0.00 4.30
270 274 9.783256 AAGTTAGAACATTTTGTGTCAGTAAAC 57.217 29.630 0.00 0.00 41.14 2.01
290 294 6.731292 AAACAAAGAGGCCATATAAATCCC 57.269 37.500 5.01 0.00 0.00 3.85
295 299 4.911390 AGAGGCCATATAAATCCCGAAAG 58.089 43.478 5.01 0.00 0.00 2.62
306 310 2.570415 TCCCGAAAGCATTGTTGGTA 57.430 45.000 0.00 0.00 32.06 3.25
313 317 5.088739 CGAAAGCATTGTTGGTATCACTTC 58.911 41.667 0.00 0.00 32.06 3.01
315 319 6.092122 CGAAAGCATTGTTGGTATCACTTCTA 59.908 38.462 0.00 0.00 32.06 2.10
318 323 5.643777 AGCATTGTTGGTATCACTTCTACAC 59.356 40.000 0.00 0.00 0.00 2.90
337 342 8.099364 TCTACACCAAAATCAAATCACTTCTC 57.901 34.615 0.00 0.00 0.00 2.87
338 343 5.762045 ACACCAAAATCAAATCACTTCTCG 58.238 37.500 0.00 0.00 0.00 4.04
340 345 4.278170 ACCAAAATCAAATCACTTCTCGCA 59.722 37.500 0.00 0.00 0.00 5.10
343 452 7.028962 CCAAAATCAAATCACTTCTCGCATTA 58.971 34.615 0.00 0.00 0.00 1.90
354 463 6.870439 TCACTTCTCGCATTAGAATATGATGG 59.130 38.462 0.00 0.00 35.04 3.51
362 471 6.650807 CGCATTAGAATATGATGGGTGTAAGT 59.349 38.462 0.00 0.00 34.33 2.24
371 480 9.693739 AATATGATGGGTGTAAGTTACATTTCA 57.306 29.630 18.35 16.89 41.34 2.69
377 486 6.237313 GGTGTAAGTTACATTTCAGACACC 57.763 41.667 18.35 10.49 46.20 4.16
381 490 8.995220 GTGTAAGTTACATTTCAGACACCATTA 58.005 33.333 18.35 0.00 41.34 1.90
385 494 8.635765 AGTTACATTTCAGACACCATTAATGT 57.364 30.769 14.25 0.00 39.02 2.71
388 497 7.523293 ACATTTCAGACACCATTAATGTTGA 57.477 32.000 18.71 9.14 33.73 3.18
393 502 7.144722 TCAGACACCATTAATGTTGAATCAC 57.855 36.000 18.71 5.69 0.00 3.06
428 537 9.990868 ATACTATTCCCTTTGTTTGGAATTACT 57.009 29.630 8.89 0.00 46.68 2.24
429 538 8.721133 ACTATTCCCTTTGTTTGGAATTACTT 57.279 30.769 8.89 0.00 46.68 2.24
430 539 9.816787 ACTATTCCCTTTGTTTGGAATTACTTA 57.183 29.630 8.89 0.00 46.68 2.24
509 618 6.727824 ATGACAAGTAATTTCAGACGAAGG 57.272 37.500 0.00 0.00 31.28 3.46
510 619 4.994852 TGACAAGTAATTTCAGACGAAGGG 59.005 41.667 0.00 0.00 31.28 3.95
511 620 5.221561 TGACAAGTAATTTCAGACGAAGGGA 60.222 40.000 0.00 0.00 31.28 4.20
512 621 5.238583 ACAAGTAATTTCAGACGAAGGGAG 58.761 41.667 0.00 0.00 31.28 4.30
513 622 5.221661 ACAAGTAATTTCAGACGAAGGGAGT 60.222 40.000 0.00 0.00 31.28 3.85
514 623 6.014840 ACAAGTAATTTCAGACGAAGGGAGTA 60.015 38.462 0.00 0.00 31.28 2.59
515 624 5.963594 AGTAATTTCAGACGAAGGGAGTAC 58.036 41.667 0.00 0.00 31.28 2.73
516 625 3.889520 ATTTCAGACGAAGGGAGTACC 57.110 47.619 0.00 0.00 40.67 3.34
526 635 4.447734 GGAGTACCTCCGTTCCCA 57.552 61.111 0.00 0.00 41.08 4.37
527 636 2.674958 GGAGTACCTCCGTTCCCAA 58.325 57.895 0.00 0.00 41.08 4.12
528 637 0.978907 GGAGTACCTCCGTTCCCAAA 59.021 55.000 0.00 0.00 41.08 3.28
529 638 1.558294 GGAGTACCTCCGTTCCCAAAT 59.442 52.381 0.00 0.00 41.08 2.32
530 639 2.767960 GGAGTACCTCCGTTCCCAAATA 59.232 50.000 0.00 0.00 41.08 1.40
531 640 3.390311 GGAGTACCTCCGTTCCCAAATAT 59.610 47.826 0.00 0.00 41.08 1.28
532 641 4.141551 GGAGTACCTCCGTTCCCAAATATT 60.142 45.833 0.00 0.00 41.08 1.28
533 642 5.434408 GAGTACCTCCGTTCCCAAATATTT 58.566 41.667 0.00 0.00 0.00 1.40
534 643 5.190677 AGTACCTCCGTTCCCAAATATTTG 58.809 41.667 19.40 19.40 37.90 2.32
535 644 4.042271 ACCTCCGTTCCCAAATATTTGT 57.958 40.909 23.24 1.82 36.45 2.83
536 645 4.014406 ACCTCCGTTCCCAAATATTTGTC 58.986 43.478 23.24 11.68 36.45 3.18
537 646 4.263771 ACCTCCGTTCCCAAATATTTGTCT 60.264 41.667 23.24 0.00 36.45 3.41
538 647 4.705023 CCTCCGTTCCCAAATATTTGTCTT 59.295 41.667 23.24 0.00 36.45 3.01
539 648 5.185056 CCTCCGTTCCCAAATATTTGTCTTT 59.815 40.000 23.24 0.00 36.45 2.52
540 649 6.262193 TCCGTTCCCAAATATTTGTCTTTC 57.738 37.500 23.24 10.84 36.45 2.62
541 650 6.007703 TCCGTTCCCAAATATTTGTCTTTCT 58.992 36.000 23.24 0.00 36.45 2.52
542 651 7.169591 TCCGTTCCCAAATATTTGTCTTTCTA 58.830 34.615 23.24 5.03 36.45 2.10
543 652 7.335924 TCCGTTCCCAAATATTTGTCTTTCTAG 59.664 37.037 23.24 8.23 36.45 2.43
544 653 7.335924 CCGTTCCCAAATATTTGTCTTTCTAGA 59.664 37.037 23.24 7.17 36.45 2.43
545 654 8.391106 CGTTCCCAAATATTTGTCTTTCTAGAG 58.609 37.037 23.24 7.00 36.45 2.43
546 655 9.449719 GTTCCCAAATATTTGTCTTTCTAGAGA 57.550 33.333 23.24 5.94 36.45 3.10
573 682 9.595823 TTCTAGAAAGACAAATATTAGGGAACG 57.404 33.333 1.68 0.00 0.00 3.95
574 683 8.202137 TCTAGAAAGACAAATATTAGGGAACGG 58.798 37.037 0.00 0.00 0.00 4.44
575 684 6.954232 AGAAAGACAAATATTAGGGAACGGA 58.046 36.000 0.00 0.00 0.00 4.69
576 685 7.048512 AGAAAGACAAATATTAGGGAACGGAG 58.951 38.462 0.00 0.00 0.00 4.63
577 686 5.291905 AGACAAATATTAGGGAACGGAGG 57.708 43.478 0.00 0.00 0.00 4.30
580 689 4.102681 ACAAATATTAGGGAACGGAGGGAG 59.897 45.833 0.00 0.00 0.00 4.30
586 695 1.838077 AGGGAACGGAGGGAGTATTTG 59.162 52.381 0.00 0.00 0.00 2.32
602 711 6.526674 GGAGTATTTGATAAACTGCCAAAACG 59.473 38.462 0.00 0.00 34.08 3.60
630 741 1.844687 AGGAACGGAGGGTGTACTAC 58.155 55.000 0.00 0.00 0.00 2.73
641 752 6.623767 CGGAGGGTGTACTACTAAAGTGTAAC 60.624 46.154 0.00 0.00 39.39 2.50
700 814 9.285770 GCAATTAGCTAGTAACACAAATTTACC 57.714 33.333 0.00 0.00 41.15 2.85
859 975 2.520741 CCACCCCACGCCAACTTT 60.521 61.111 0.00 0.00 0.00 2.66
892 1008 1.538204 CCGGACTCACCCATAATCACG 60.538 57.143 0.00 0.00 34.64 4.35
898 1014 2.004120 ACCCATAATCACGCCCCCA 61.004 57.895 0.00 0.00 0.00 4.96
899 1015 1.528309 CCCATAATCACGCCCCCAC 60.528 63.158 0.00 0.00 0.00 4.61
982 1111 1.737201 GAACAAACACCCAACCCCG 59.263 57.895 0.00 0.00 0.00 5.73
983 1112 2.358193 GAACAAACACCCAACCCCGC 62.358 60.000 0.00 0.00 0.00 6.13
984 1113 2.835431 CAAACACCCAACCCCGCA 60.835 61.111 0.00 0.00 0.00 5.69
985 1114 2.835895 AAACACCCAACCCCGCAC 60.836 61.111 0.00 0.00 0.00 5.34
1214 1351 2.543777 TTTTGACCTAAGTCTGCGCT 57.456 45.000 9.73 0.00 43.91 5.92
1238 1375 3.508840 CGCCGGAGCCATGGTTTC 61.509 66.667 14.67 4.93 34.57 2.78
1242 1379 2.042944 GGAGCCATGGTTTCCCCC 60.043 66.667 20.77 7.14 0.00 5.40
1297 1434 2.507102 ATCTGCGCGGTTCTGACG 60.507 61.111 17.37 0.00 0.00 4.35
1425 1665 0.037734 CCCCCACGCCCCTATATTTC 59.962 60.000 0.00 0.00 0.00 2.17
1449 1689 5.179555 CGCTTGGCCTAATTTAGAGTAATCC 59.820 44.000 3.32 0.00 0.00 3.01
1695 2568 6.061022 TGTAAGCTTCATTCCTGTCCATTA 57.939 37.500 0.00 0.00 0.00 1.90
1715 2588 6.183360 CCATTAACTGTTTTCATGATGTTGCG 60.183 38.462 0.00 0.00 0.00 4.85
1730 2603 3.081061 TGTTGCGTTGGATGATAGCTTT 58.919 40.909 0.00 0.00 0.00 3.51
1843 2717 2.034558 GTGACCCAGATTGGTTGTTGTG 59.965 50.000 0.00 0.00 39.24 3.33
1943 2817 7.855904 GTGGACTGAAAATGTTAGTACTGTTTG 59.144 37.037 5.39 0.00 0.00 2.93
2230 3126 7.789273 TTTATTCATGCCATGCCTATTTTTG 57.211 32.000 0.00 0.00 0.00 2.44
2621 3523 4.951715 AGCATCATATCTCTTTTTGGCACA 59.048 37.500 0.00 0.00 0.00 4.57
2678 3580 5.590530 ATCTGAGTACAAATTCTCGCTCT 57.409 39.130 0.00 0.00 33.88 4.09
2708 3694 7.978982 TCTCTGCTTCAACTAATGCTATTTTC 58.021 34.615 0.00 0.00 0.00 2.29
2844 3831 6.378564 TCTTCACTCTAGCTAACAAGCTGTAT 59.621 38.462 10.08 0.00 45.81 2.29
3135 4129 9.614792 AACCTATCTTACTGATATTGGTGAAAC 57.385 33.333 0.00 0.00 36.73 2.78
3186 4180 8.050778 TGTGTATAAAAATTAGCTGGACCTTG 57.949 34.615 0.00 0.00 0.00 3.61
3187 4181 7.122055 TGTGTATAAAAATTAGCTGGACCTTGG 59.878 37.037 0.00 0.00 0.00 3.61
3188 4182 7.338449 GTGTATAAAAATTAGCTGGACCTTGGA 59.662 37.037 0.00 0.00 0.00 3.53
3289 4288 5.364157 AGAAAACTGTAGGAGAGTTGTCTGT 59.636 40.000 8.07 0.00 43.51 3.41
3403 4402 6.647334 TGACAAACATTTCTTCCAATGCTA 57.353 33.333 0.00 0.00 37.63 3.49
3623 4624 3.812053 CCTGAGCACCACTTCTAATATGC 59.188 47.826 0.00 0.00 0.00 3.14
3778 4779 8.722342 TCAAGTGAAAATTTATTACTTCGTGC 57.278 30.769 10.11 0.00 29.78 5.34
3977 4981 2.135933 GCATCTTCCGATTCTTACCCG 58.864 52.381 0.00 0.00 0.00 5.28
4006 5010 1.188863 GTTGATGCAGGCAGGGAATT 58.811 50.000 0.00 0.00 0.00 2.17
4127 5131 9.860898 ATCTTTCACTATTGGTAGCAATTTTTC 57.139 29.630 24.01 0.00 0.00 2.29
4261 5265 1.873591 GTGAGTGCTTTGGTGGTACTG 59.126 52.381 0.00 0.00 30.31 2.74
4422 5427 2.545106 TCATTGATGTTCGATGCATCCG 59.455 45.455 20.87 15.31 41.32 4.18
4453 5458 7.916914 TCCAATCTGCAGTTGATATCATATG 57.083 36.000 22.59 9.48 0.00 1.78
4522 5527 7.484993 TGCACTACTGGTCCTTAGTTTTATA 57.515 36.000 1.94 0.00 0.00 0.98
4545 5550 8.995027 ATAATAATTTTAGTGGATGTGCAGGA 57.005 30.769 0.00 0.00 0.00 3.86
4799 5804 8.682936 AGTATCTAAAATCGGCTCAATCAAAT 57.317 30.769 0.00 0.00 0.00 2.32
4908 6153 7.495934 CCTTCAGTCATACCTTTTATGTGGTAG 59.504 40.741 0.00 0.00 41.46 3.18
4962 6207 2.427232 AAGCACATGCACATCAACAC 57.573 45.000 6.64 0.00 45.16 3.32
5040 6285 2.546368 TGCTGTTTAGTTGTTACTGGCG 59.454 45.455 0.00 0.00 35.78 5.69
5148 6393 0.618981 AAGTTCCTGAACCCGATCCC 59.381 55.000 6.41 0.00 42.06 3.85
5202 6447 0.548926 TTCCAGTACAGCCCATCCCA 60.549 55.000 0.00 0.00 0.00 4.37
5227 6472 3.714798 AGTTGTTTCACCTCCTACCAAGA 59.285 43.478 0.00 0.00 0.00 3.02
5265 6510 6.287589 ACTGGTGATCTCTTGGTAAGTAAG 57.712 41.667 0.00 0.00 0.00 2.34
5266 6511 5.780793 ACTGGTGATCTCTTGGTAAGTAAGT 59.219 40.000 0.00 0.00 0.00 2.24
5267 6512 6.952358 ACTGGTGATCTCTTGGTAAGTAAGTA 59.048 38.462 0.00 0.00 0.00 2.24
5268 6513 7.453752 ACTGGTGATCTCTTGGTAAGTAAGTAA 59.546 37.037 0.00 0.00 0.00 2.24
5432 6677 7.225734 GGTAAGAACTCAGGATTGATTCTTAGC 59.774 40.741 20.12 20.12 43.22 3.09
5655 6902 4.281941 ACCTTTGCCATTCTTTTCTTCTCC 59.718 41.667 0.00 0.00 0.00 3.71
5718 6965 2.156310 CGTTGCTCGTTACAAGGGTTAC 59.844 50.000 0.00 0.00 34.52 2.50
5753 7000 1.066143 GCCAGCAGCCAGTTAAGTCTA 60.066 52.381 0.00 0.00 34.35 2.59
5799 7046 9.912634 GGTATCCATAATTCCATATGTTGTTTG 57.087 33.333 1.24 0.00 32.48 2.93
5849 7097 9.947669 GTAGTATTAGTCGTCATCTGTTTGTAT 57.052 33.333 0.00 0.00 0.00 2.29
5900 7148 1.591863 GAGAACCATCGCGGCCTAC 60.592 63.158 6.13 0.00 39.03 3.18
5909 7157 2.033602 GCGGCCTACCCAACTTGT 59.966 61.111 0.00 0.00 0.00 3.16
6011 7259 7.607607 TCATGTACTGATATTTGGATATGGCAC 59.392 37.037 0.00 0.00 0.00 5.01
6035 7296 8.335356 CACCCATATTATTCTGTTAGTTTGACG 58.665 37.037 0.00 0.00 0.00 4.35
6055 7324 2.731976 CGCACAACTCCTCTGAAAGTAC 59.268 50.000 0.00 0.00 33.76 2.73
6057 7326 3.495001 GCACAACTCCTCTGAAAGTACAC 59.505 47.826 0.00 0.00 33.76 2.90
6147 7416 5.808042 TGTTCTGCTTGATCTTCTTATGC 57.192 39.130 0.00 0.00 0.00 3.14
6148 7417 5.247862 TGTTCTGCTTGATCTTCTTATGCA 58.752 37.500 0.00 0.00 0.00 3.96
6149 7418 5.353400 TGTTCTGCTTGATCTTCTTATGCAG 59.647 40.000 10.09 10.09 45.14 4.41
6150 7419 5.095145 TCTGCTTGATCTTCTTATGCAGT 57.905 39.130 13.92 0.00 44.42 4.40
6151 7420 6.225981 TCTGCTTGATCTTCTTATGCAGTA 57.774 37.500 13.92 3.52 44.42 2.74
6152 7421 6.279123 TCTGCTTGATCTTCTTATGCAGTAG 58.721 40.000 13.92 0.00 44.42 2.57
6153 7422 4.813161 TGCTTGATCTTCTTATGCAGTAGC 59.187 41.667 0.00 0.00 42.57 3.58
6190 7865 1.709578 TGTGCAGTGGGCCAATAAAA 58.290 45.000 8.40 0.00 43.89 1.52
6287 7962 5.782047 TGATAATTGCTTTTGGACCAGTTG 58.218 37.500 0.00 0.00 0.00 3.16
6304 7979 4.026640 CCAGTTGTTTTCGTTGATGCTTTG 60.027 41.667 0.00 0.00 0.00 2.77
6320 7995 3.318839 TGCTTTGCTCTGTAATTGTTGCT 59.681 39.130 0.00 0.00 0.00 3.91
6373 8048 7.341805 ACAGCTATTTGGACTGAATTAGACAT 58.658 34.615 0.00 0.00 35.38 3.06
6389 8064 3.490348 AGACATTGCCTGCATTATACCC 58.510 45.455 0.00 0.00 0.00 3.69
6532 8214 4.994282 TGAACTAGGGATCGCTAGGAATA 58.006 43.478 36.27 22.81 0.00 1.75
6706 8389 7.875971 AGATATTGGCGATTGAATTAAACTCC 58.124 34.615 0.00 0.00 0.00 3.85
6711 8394 4.494199 GGCGATTGAATTAAACTCCAGTCG 60.494 45.833 0.00 0.00 40.24 4.18
6729 8412 2.028883 GTCGCCGATTGTAAGTGTAAGC 59.971 50.000 0.00 0.00 0.00 3.09
6744 8427 1.004504 GTAAGCATCTAAGCTGCGTGC 60.005 52.381 0.00 3.89 45.89 5.34
6757 8440 0.526211 TGCGTGCTCTATGTTCTCGT 59.474 50.000 0.00 0.00 0.00 4.18
6770 8453 0.252513 TTCTCGTCCCCCATCCAAGA 60.253 55.000 0.00 0.00 0.00 3.02
6847 8530 5.069648 TCCCTGAGTGATATTAAGAGCACAG 59.930 44.000 19.51 9.58 33.85 3.66
6851 8534 6.409704 TGAGTGATATTAAGAGCACAGCTTT 58.590 36.000 19.51 0.00 39.88 3.51
6852 8535 7.555965 TGAGTGATATTAAGAGCACAGCTTTA 58.444 34.615 19.51 0.00 39.88 1.85
6869 8576 9.546909 CACAGCTTTAATGTGTAAACTTCTATG 57.453 33.333 0.39 0.00 42.47 2.23
6878 8585 2.834638 AAACTTCTATGCCCTGCCAT 57.165 45.000 0.00 0.00 0.00 4.40
6899 8606 0.176680 AGTATGGAGCTTGTGCGAGG 59.823 55.000 0.00 0.00 45.42 4.63
6907 8614 2.352960 GAGCTTGTGCGAGGAAATAAGG 59.647 50.000 0.00 0.00 45.42 2.69
6908 8615 2.027192 AGCTTGTGCGAGGAAATAAGGA 60.027 45.455 0.00 0.00 45.42 3.36
6909 8616 2.747446 GCTTGTGCGAGGAAATAAGGAA 59.253 45.455 0.00 0.00 0.00 3.36
6919 8626 6.284459 CGAGGAAATAAGGAAGAGCATAAGT 58.716 40.000 0.00 0.00 0.00 2.24
6939 8648 4.964593 AGTATGATGCTATGATGTGTGCA 58.035 39.130 0.00 0.00 39.83 4.57
6993 8702 4.683832 GTCTGGCGTATGTCTCATTTACT 58.316 43.478 0.00 0.00 0.00 2.24
6994 8703 4.504461 GTCTGGCGTATGTCTCATTTACTG 59.496 45.833 0.00 0.00 0.00 2.74
6999 8708 5.050769 GGCGTATGTCTCATTTACTGTCATG 60.051 44.000 0.00 0.00 0.00 3.07
7055 8765 5.548406 ACATTTTTACGCCTTGTACTCTCT 58.452 37.500 0.00 0.00 31.20 3.10
7056 8766 5.638234 ACATTTTTACGCCTTGTACTCTCTC 59.362 40.000 0.00 0.00 31.20 3.20
7057 8767 4.859304 TTTTACGCCTTGTACTCTCTCA 57.141 40.909 0.00 0.00 31.20 3.27
7058 8768 4.436242 TTTACGCCTTGTACTCTCTCAG 57.564 45.455 0.00 0.00 31.20 3.35
7063 8773 2.100087 GCCTTGTACTCTCTCAGTAGGC 59.900 54.545 0.00 0.00 43.93 3.93
7064 8774 3.626930 CCTTGTACTCTCTCAGTAGGCT 58.373 50.000 0.00 0.00 38.35 4.58
7148 8861 7.261325 TGCAGTTGAAAGTGTTTGCTTTTATA 58.739 30.769 0.17 0.00 38.64 0.98
7195 8908 8.200120 TCTGTCTTGATAGTCTTCCACATAATG 58.800 37.037 0.00 0.00 0.00 1.90
7198 8911 8.821894 GTCTTGATAGTCTTCCACATAATGTTC 58.178 37.037 0.00 0.00 0.00 3.18
7200 8913 9.388506 CTTGATAGTCTTCCACATAATGTTCTT 57.611 33.333 0.00 0.00 0.00 2.52
7201 8914 8.722480 TGATAGTCTTCCACATAATGTTCTTG 57.278 34.615 0.00 0.00 0.00 3.02
7281 8995 3.411446 TCTAAGGGTGCACTGTTGATTG 58.589 45.455 17.98 0.47 0.00 2.67
7311 9025 8.887036 AGTTTTATGGGATTGTTGTTTTTCTC 57.113 30.769 0.00 0.00 0.00 2.87
7312 9026 8.704668 AGTTTTATGGGATTGTTGTTTTTCTCT 58.295 29.630 0.00 0.00 0.00 3.10
7322 9036 5.197451 TGTTGTTTTTCTCTTGAGCCCTTA 58.803 37.500 0.00 0.00 0.00 2.69
7357 9071 7.675962 AACAACGTAAGGCATTATCAGTTTA 57.324 32.000 0.00 0.00 46.39 2.01
7359 9073 8.276252 ACAACGTAAGGCATTATCAGTTTATT 57.724 30.769 0.00 0.00 46.39 1.40
7360 9074 9.386010 ACAACGTAAGGCATTATCAGTTTATTA 57.614 29.630 0.00 0.00 46.39 0.98
7386 9100 7.551585 TCAGTTTCTTTGGATTGTTAGCAAAA 58.448 30.769 0.00 0.00 38.21 2.44
7389 9103 7.442062 AGTTTCTTTGGATTGTTAGCAAAATGG 59.558 33.333 0.00 0.00 38.21 3.16
7417 9131 7.129109 TCTACTTTATTTGGTGAAAAGCTCG 57.871 36.000 0.00 0.00 34.31 5.03
7420 9134 6.569780 ACTTTATTTGGTGAAAAGCTCGTTT 58.430 32.000 0.00 0.00 34.31 3.60
7421 9135 6.695713 ACTTTATTTGGTGAAAAGCTCGTTTC 59.304 34.615 4.25 4.25 37.89 2.78
7422 9136 4.647424 ATTTGGTGAAAAGCTCGTTTCA 57.353 36.364 9.09 9.09 43.51 2.69
7426 9140 2.730183 TGAAAAGCTCGTTTCACGTG 57.270 45.000 9.94 9.94 41.45 4.49
7433 9147 1.112459 CTCGTTTCACGTGCAAAAGC 58.888 50.000 11.67 1.25 43.14 3.51
7444 9158 4.505922 CACGTGCAAAAGCCTTAAATTTCA 59.494 37.500 0.82 0.00 0.00 2.69
7445 9159 5.177327 CACGTGCAAAAGCCTTAAATTTCAT 59.823 36.000 0.82 0.00 0.00 2.57
7448 9162 6.073873 CGTGCAAAAGCCTTAAATTTCATCAA 60.074 34.615 0.00 0.00 0.00 2.57
7454 9168 9.914131 AAAAGCCTTAAATTTCATCAACTCTAC 57.086 29.630 0.00 0.00 0.00 2.59
7469 9183 1.002134 CTACTTGCAGGGTGGTGGG 60.002 63.158 0.00 0.00 0.00 4.61
7472 9186 4.284550 TTGCAGGGTGGTGGGCTC 62.285 66.667 0.00 0.00 0.00 4.70
7573 9287 3.164268 CTCCCAACCCATTCATGACAAA 58.836 45.455 0.00 0.00 0.00 2.83
7583 9297 5.336690 CCCATTCATGACAAACGATCCTTTT 60.337 40.000 0.00 0.00 0.00 2.27
7709 9423 1.378911 AATTCAGCCGCAGCATCCA 60.379 52.632 0.00 0.00 43.56 3.41
7921 9639 5.236282 CCTGGCTCTATTCATGTATGTCAG 58.764 45.833 0.00 0.00 0.00 3.51
8057 9775 8.413309 AATAGTAGGACGTTGGCTATATAACA 57.587 34.615 0.00 0.00 0.00 2.41
8068 9789 3.363673 GGCTATATAACAAAACGGCGAGC 60.364 47.826 16.62 7.12 0.00 5.03
8087 9808 2.650608 GCATTTCGCTCGTTCTTTTGT 58.349 42.857 0.00 0.00 37.77 2.83
8098 9819 3.003275 TCGTTCTTTTGTCATGGCTGTTC 59.997 43.478 0.00 0.00 0.00 3.18
8123 9844 2.041485 TGCCATCTCCCACATTCTTTGA 59.959 45.455 0.00 0.00 0.00 2.69
8124 9845 3.091545 GCCATCTCCCACATTCTTTGAA 58.908 45.455 0.00 0.00 0.00 2.69
8125 9846 3.129988 GCCATCTCCCACATTCTTTGAAG 59.870 47.826 0.00 0.00 0.00 3.02
8126 9847 4.592942 CCATCTCCCACATTCTTTGAAGA 58.407 43.478 0.00 0.00 0.00 2.87
8127 9848 5.198965 CCATCTCCCACATTCTTTGAAGAT 58.801 41.667 0.00 0.00 34.49 2.40
8128 9849 5.067413 CCATCTCCCACATTCTTTGAAGATG 59.933 44.000 0.00 0.00 34.49 2.90
8129 9850 4.012374 TCTCCCACATTCTTTGAAGATGC 58.988 43.478 0.00 0.00 34.49 3.91
8130 9851 3.091545 TCCCACATTCTTTGAAGATGCC 58.908 45.455 0.00 0.00 34.49 4.40
8131 9852 2.167075 CCCACATTCTTTGAAGATGCCC 59.833 50.000 0.00 0.00 34.49 5.36
8132 9853 2.827322 CCACATTCTTTGAAGATGCCCA 59.173 45.455 0.00 0.00 34.49 5.36
8133 9854 3.449737 CCACATTCTTTGAAGATGCCCAT 59.550 43.478 0.00 0.00 34.49 4.00
8134 9855 4.430007 CACATTCTTTGAAGATGCCCATG 58.570 43.478 0.00 0.00 34.49 3.66
8135 9856 4.081862 CACATTCTTTGAAGATGCCCATGT 60.082 41.667 0.00 0.00 33.86 3.21
8136 9857 4.529377 ACATTCTTTGAAGATGCCCATGTT 59.471 37.500 0.00 0.00 31.09 2.71
8137 9858 5.716228 ACATTCTTTGAAGATGCCCATGTTA 59.284 36.000 0.00 0.00 31.09 2.41
8138 9859 6.211184 ACATTCTTTGAAGATGCCCATGTTAA 59.789 34.615 0.00 0.00 31.09 2.01
8139 9860 5.643379 TCTTTGAAGATGCCCATGTTAAC 57.357 39.130 0.00 0.00 0.00 2.01
8140 9861 5.076182 TCTTTGAAGATGCCCATGTTAACA 58.924 37.500 11.41 11.41 0.00 2.41
8141 9862 5.716228 TCTTTGAAGATGCCCATGTTAACAT 59.284 36.000 15.47 15.47 36.96 2.71
8142 9863 7.791587 TTCTTTGAAGATGCCCATGTTAACATG 60.792 37.037 32.71 32.71 42.66 3.21
8155 9876 7.959718 CATGTTAACATGTTATCTCTTGCAC 57.040 36.000 31.75 11.54 46.40 4.57
8156 9877 7.529158 CATGTTAACATGTTATCTCTTGCACA 58.471 34.615 31.75 16.27 46.40 4.57
8157 9878 6.898041 TGTTAACATGTTATCTCTTGCACAC 58.102 36.000 18.69 10.24 0.00 3.82
8158 9879 6.710295 TGTTAACATGTTATCTCTTGCACACT 59.290 34.615 18.69 0.00 0.00 3.55
8159 9880 7.228507 TGTTAACATGTTATCTCTTGCACACTT 59.771 33.333 18.69 0.00 0.00 3.16
8160 9881 5.618056 ACATGTTATCTCTTGCACACTTG 57.382 39.130 0.00 0.00 0.00 3.16
8161 9882 5.065914 ACATGTTATCTCTTGCACACTTGT 58.934 37.500 0.00 0.00 0.00 3.16
8162 9883 5.180117 ACATGTTATCTCTTGCACACTTGTC 59.820 40.000 0.00 0.00 0.00 3.18
8163 9884 4.960938 TGTTATCTCTTGCACACTTGTCT 58.039 39.130 0.00 0.00 0.00 3.41
8164 9885 6.096673 TGTTATCTCTTGCACACTTGTCTA 57.903 37.500 0.00 0.00 0.00 2.59
8246 10028 4.154918 GGAGTGTTTCCTTTGCTGTGATAG 59.845 45.833 0.00 0.00 43.16 2.08
8248 10030 5.133221 AGTGTTTCCTTTGCTGTGATAGTT 58.867 37.500 0.00 0.00 0.00 2.24
8249 10031 6.296026 AGTGTTTCCTTTGCTGTGATAGTTA 58.704 36.000 0.00 0.00 0.00 2.24
8250 10032 6.204882 AGTGTTTCCTTTGCTGTGATAGTTAC 59.795 38.462 0.00 0.00 0.00 2.50
8254 10036 5.865085 TCCTTTGCTGTGATAGTTACACTT 58.135 37.500 0.00 0.00 38.81 3.16
8268 10050 4.516698 AGTTACACTTTGATGGCTGAACTG 59.483 41.667 0.00 0.00 0.00 3.16
8280 10062 2.284190 GCTGAACTGTCCTGGCTAATC 58.716 52.381 0.00 0.00 0.00 1.75
8291 10073 3.774766 TCCTGGCTAATCTACTTGCTGAA 59.225 43.478 0.00 0.00 0.00 3.02
8326 10108 2.871453 ACCGGCTGTCCAAAATAAACT 58.129 42.857 0.00 0.00 0.00 2.66
8440 10222 0.249657 GGAGTGGTGCCGATCATCTC 60.250 60.000 0.00 0.00 0.00 2.75
8499 10281 2.824041 CCTCCCCGTTTCCGCATG 60.824 66.667 0.00 0.00 0.00 4.06
8508 10290 1.520564 TTTCCGCATGGGATCGACG 60.521 57.895 12.02 0.00 46.62 5.12
8630 10412 4.023622 GCTATCGATCTACTCTGCTGAACA 60.024 45.833 0.00 0.00 0.00 3.18
8644 10426 1.388093 CTGAACATGCTTGTCGTCTCG 59.612 52.381 5.61 0.00 34.06 4.04
8672 10464 5.514274 TGGGTTAAAGAAAAGCAACTGAG 57.486 39.130 0.00 0.00 0.00 3.35
8694 10486 5.546526 AGAGACAGAAGAATCTTCAACACC 58.453 41.667 23.20 10.25 32.03 4.16
8733 10531 3.020237 GCCTCGTGAGAAGTCCCCC 62.020 68.421 0.00 0.00 41.32 5.40
8735 10533 1.192146 CCTCGTGAGAAGTCCCCCAA 61.192 60.000 0.00 0.00 41.32 4.12
8737 10535 1.003718 CGTGAGAAGTCCCCCAACC 60.004 63.158 0.00 0.00 0.00 3.77
8738 10536 1.379146 GTGAGAAGTCCCCCAACCC 59.621 63.158 0.00 0.00 0.00 4.11
8739 10537 1.073319 TGAGAAGTCCCCCAACCCA 60.073 57.895 0.00 0.00 0.00 4.51
8741 10539 1.386772 AGAAGTCCCCCAACCCACA 60.387 57.895 0.00 0.00 0.00 4.17
8743 10541 0.826256 GAAGTCCCCCAACCCACAAC 60.826 60.000 0.00 0.00 0.00 3.32
8745 10543 2.370403 TCCCCCAACCCACAACCT 60.370 61.111 0.00 0.00 0.00 3.50
8746 10544 1.072852 TCCCCCAACCCACAACCTA 60.073 57.895 0.00 0.00 0.00 3.08
8747 10545 1.137594 TCCCCCAACCCACAACCTAG 61.138 60.000 0.00 0.00 0.00 3.02
8748 10546 1.304134 CCCCAACCCACAACCTAGC 60.304 63.158 0.00 0.00 0.00 3.42
8749 10547 1.674322 CCCAACCCACAACCTAGCG 60.674 63.158 0.00 0.00 0.00 4.26
8771 10569 1.986698 ACATGGCTACACGTACGAAC 58.013 50.000 24.41 5.77 0.00 3.95
8783 10581 1.063764 CGTACGAACTGTCCTCCTAGC 59.936 57.143 10.44 0.00 0.00 3.42
8786 10584 1.819903 ACGAACTGTCCTCCTAGCTTC 59.180 52.381 0.00 0.00 0.00 3.86
8792 10590 2.955660 CTGTCCTCCTAGCTTCTGTAGG 59.044 54.545 0.00 0.00 38.83 3.18
8793 10591 2.312140 TGTCCTCCTAGCTTCTGTAGGT 59.688 50.000 0.00 0.00 38.62 3.08
8795 10593 1.950909 CCTCCTAGCTTCTGTAGGTCG 59.049 57.143 0.00 0.00 38.62 4.79
8796 10594 2.645802 CTCCTAGCTTCTGTAGGTCGT 58.354 52.381 0.00 0.00 38.62 4.34
8797 10595 3.433314 CCTCCTAGCTTCTGTAGGTCGTA 60.433 52.174 0.00 0.00 38.62 3.43
8798 10596 3.539604 TCCTAGCTTCTGTAGGTCGTAC 58.460 50.000 0.00 0.00 38.62 3.67
8800 10598 1.818642 AGCTTCTGTAGGTCGTACGT 58.181 50.000 16.05 0.00 33.87 3.57
8801 10599 1.467734 AGCTTCTGTAGGTCGTACGTG 59.532 52.381 16.05 0.00 33.87 4.49
8868 10681 1.078567 CTCCTTGGCTCCAGTCAGC 60.079 63.158 0.00 0.00 38.84 4.26
8911 10724 0.933097 CTTGCCCAGATCGTGATTCG 59.067 55.000 0.00 0.00 41.41 3.34
9018 10844 2.785258 GCTGCCTCGGCTAAAACG 59.215 61.111 9.65 0.00 42.51 3.60
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 73 9.965902 AGACAAATATTTAGAAACAGATGGAGT 57.034 29.630 0.00 0.00 0.00 3.85
107 109 9.506018 CATCCATATGTGATAGTCCATTTGTAA 57.494 33.333 1.24 0.00 0.00 2.41
108 110 8.659527 ACATCCATATGTGATAGTCCATTTGTA 58.340 33.333 1.24 0.00 44.79 2.41
109 111 7.520798 ACATCCATATGTGATAGTCCATTTGT 58.479 34.615 1.24 0.00 44.79 2.83
110 112 7.991084 ACATCCATATGTGATAGTCCATTTG 57.009 36.000 1.24 0.00 44.79 2.32
153 155 7.519002 ACGAAGCAAAATAAGTGAATCTACAC 58.481 34.615 0.00 0.00 40.60 2.90
154 156 7.667043 ACGAAGCAAAATAAGTGAATCTACA 57.333 32.000 0.00 0.00 0.00 2.74
155 157 9.638300 CATACGAAGCAAAATAAGTGAATCTAC 57.362 33.333 0.00 0.00 0.00 2.59
156 158 9.378551 ACATACGAAGCAAAATAAGTGAATCTA 57.621 29.630 0.00 0.00 0.00 1.98
157 159 8.268850 ACATACGAAGCAAAATAAGTGAATCT 57.731 30.769 0.00 0.00 0.00 2.40
158 160 9.638300 CTACATACGAAGCAAAATAAGTGAATC 57.362 33.333 0.00 0.00 0.00 2.52
159 161 9.162764 ACTACATACGAAGCAAAATAAGTGAAT 57.837 29.630 0.00 0.00 0.00 2.57
160 162 8.542497 ACTACATACGAAGCAAAATAAGTGAA 57.458 30.769 0.00 0.00 0.00 3.18
161 163 7.815549 TGACTACATACGAAGCAAAATAAGTGA 59.184 33.333 0.00 0.00 0.00 3.41
162 164 7.898309 GTGACTACATACGAAGCAAAATAAGTG 59.102 37.037 0.00 0.00 0.00 3.16
163 165 7.817962 AGTGACTACATACGAAGCAAAATAAGT 59.182 33.333 0.00 0.00 0.00 2.24
164 166 8.186178 AGTGACTACATACGAAGCAAAATAAG 57.814 34.615 0.00 0.00 0.00 1.73
165 167 8.440059 CAAGTGACTACATACGAAGCAAAATAA 58.560 33.333 0.00 0.00 0.00 1.40
166 168 7.601130 ACAAGTGACTACATACGAAGCAAAATA 59.399 33.333 0.00 0.00 0.00 1.40
167 169 6.426937 ACAAGTGACTACATACGAAGCAAAAT 59.573 34.615 0.00 0.00 0.00 1.82
168 170 5.756347 ACAAGTGACTACATACGAAGCAAAA 59.244 36.000 0.00 0.00 0.00 2.44
169 171 5.294356 ACAAGTGACTACATACGAAGCAAA 58.706 37.500 0.00 0.00 0.00 3.68
170 172 4.878439 ACAAGTGACTACATACGAAGCAA 58.122 39.130 0.00 0.00 0.00 3.91
171 173 4.514781 ACAAGTGACTACATACGAAGCA 57.485 40.909 0.00 0.00 0.00 3.91
172 174 4.921515 TCAACAAGTGACTACATACGAAGC 59.078 41.667 0.00 0.00 0.00 3.86
173 175 7.402811 TTTCAACAAGTGACTACATACGAAG 57.597 36.000 0.00 0.00 35.39 3.79
174 176 7.870954 AGATTTCAACAAGTGACTACATACGAA 59.129 33.333 0.00 0.00 35.39 3.85
175 177 7.375834 AGATTTCAACAAGTGACTACATACGA 58.624 34.615 0.00 0.00 35.39 3.43
176 178 7.582435 AGATTTCAACAAGTGACTACATACG 57.418 36.000 0.00 0.00 35.39 3.06
185 187 9.996554 TGTCTTTCTATAGATTTCAACAAGTGA 57.003 29.630 2.58 0.00 0.00 3.41
203 205 9.379791 CCTACGTTCCTAAATATTTGTCTTTCT 57.620 33.333 11.05 0.00 0.00 2.52
204 206 8.610035 CCCTACGTTCCTAAATATTTGTCTTTC 58.390 37.037 11.05 0.00 0.00 2.62
205 207 8.323567 TCCCTACGTTCCTAAATATTTGTCTTT 58.676 33.333 11.05 0.00 0.00 2.52
206 208 7.854337 TCCCTACGTTCCTAAATATTTGTCTT 58.146 34.615 11.05 0.00 0.00 3.01
207 209 7.125356 ACTCCCTACGTTCCTAAATATTTGTCT 59.875 37.037 11.05 0.00 0.00 3.41
208 210 7.270779 ACTCCCTACGTTCCTAAATATTTGTC 58.729 38.462 11.05 0.00 0.00 3.18
209 211 7.191593 ACTCCCTACGTTCCTAAATATTTGT 57.808 36.000 11.05 1.79 0.00 2.83
210 212 8.419442 AGTACTCCCTACGTTCCTAAATATTTG 58.581 37.037 11.05 1.40 0.00 2.32
211 213 8.544687 AGTACTCCCTACGTTCCTAAATATTT 57.455 34.615 5.89 5.89 0.00 1.40
212 214 9.294614 CTAGTACTCCCTACGTTCCTAAATATT 57.705 37.037 0.00 0.00 0.00 1.28
213 215 8.664079 TCTAGTACTCCCTACGTTCCTAAATAT 58.336 37.037 0.00 0.00 0.00 1.28
214 216 8.034313 TCTAGTACTCCCTACGTTCCTAAATA 57.966 38.462 0.00 0.00 0.00 1.40
215 217 6.904626 TCTAGTACTCCCTACGTTCCTAAAT 58.095 40.000 0.00 0.00 0.00 1.40
216 218 6.313519 TCTAGTACTCCCTACGTTCCTAAA 57.686 41.667 0.00 0.00 0.00 1.85
217 219 5.957771 TCTAGTACTCCCTACGTTCCTAA 57.042 43.478 0.00 0.00 0.00 2.69
218 220 6.126652 ACAATCTAGTACTCCCTACGTTCCTA 60.127 42.308 0.00 0.00 0.00 2.94
219 221 5.131784 CAATCTAGTACTCCCTACGTTCCT 58.868 45.833 0.00 0.00 0.00 3.36
220 222 4.886489 ACAATCTAGTACTCCCTACGTTCC 59.114 45.833 0.00 0.00 0.00 3.62
221 223 7.281999 ACTTACAATCTAGTACTCCCTACGTTC 59.718 40.741 0.00 0.00 0.00 3.95
222 224 7.115414 ACTTACAATCTAGTACTCCCTACGTT 58.885 38.462 0.00 0.00 0.00 3.99
223 225 6.657875 ACTTACAATCTAGTACTCCCTACGT 58.342 40.000 0.00 0.00 0.00 3.57
224 226 7.565323 AACTTACAATCTAGTACTCCCTACG 57.435 40.000 0.00 0.00 0.00 3.51
225 227 9.844257 TCTAACTTACAATCTAGTACTCCCTAC 57.156 37.037 0.00 0.00 0.00 3.18
227 229 9.187996 GTTCTAACTTACAATCTAGTACTCCCT 57.812 37.037 0.00 0.00 0.00 4.20
228 230 8.964772 TGTTCTAACTTACAATCTAGTACTCCC 58.035 37.037 0.00 0.00 0.00 4.30
270 274 4.651778 TCGGGATTTATATGGCCTCTTTG 58.348 43.478 3.32 0.00 0.00 2.77
290 294 4.685169 AGTGATACCAACAATGCTTTCG 57.315 40.909 0.00 0.00 0.00 3.46
295 299 5.163754 GGTGTAGAAGTGATACCAACAATGC 60.164 44.000 0.00 0.00 0.00 3.56
306 310 8.299570 GTGATTTGATTTTGGTGTAGAAGTGAT 58.700 33.333 0.00 0.00 0.00 3.06
313 317 7.017645 CGAGAAGTGATTTGATTTTGGTGTAG 58.982 38.462 0.00 0.00 0.00 2.74
315 319 5.762045 CGAGAAGTGATTTGATTTTGGTGT 58.238 37.500 0.00 0.00 0.00 4.16
318 323 4.797471 TGCGAGAAGTGATTTGATTTTGG 58.203 39.130 0.00 0.00 0.00 3.28
337 342 6.650807 ACTTACACCCATCATATTCTAATGCG 59.349 38.462 0.00 0.00 0.00 4.73
338 343 7.986085 ACTTACACCCATCATATTCTAATGC 57.014 36.000 0.00 0.00 0.00 3.56
343 452 9.920946 AAATGTAACTTACACCCATCATATTCT 57.079 29.630 3.67 0.00 42.23 2.40
354 463 6.237313 GGTGTCTGAAATGTAACTTACACC 57.763 41.667 3.67 0.00 46.10 4.16
362 471 9.072375 TCAACATTAATGGTGTCTGAAATGTAA 57.928 29.630 28.20 6.24 45.50 2.41
371 480 8.862325 TTAGTGATTCAACATTAATGGTGTCT 57.138 30.769 28.20 18.45 45.50 3.41
483 592 8.717821 CCTTCGTCTGAAATTACTTGTCATAAA 58.282 33.333 0.00 0.00 32.66 1.40
484 593 7.333423 CCCTTCGTCTGAAATTACTTGTCATAA 59.667 37.037 0.00 0.00 32.66 1.90
485 594 6.816640 CCCTTCGTCTGAAATTACTTGTCATA 59.183 38.462 0.00 0.00 32.66 2.15
486 595 5.643777 CCCTTCGTCTGAAATTACTTGTCAT 59.356 40.000 0.00 0.00 32.66 3.06
487 596 4.994852 CCCTTCGTCTGAAATTACTTGTCA 59.005 41.667 0.00 0.00 32.66 3.58
488 597 5.235516 TCCCTTCGTCTGAAATTACTTGTC 58.764 41.667 0.00 0.00 32.66 3.18
489 598 5.221661 ACTCCCTTCGTCTGAAATTACTTGT 60.222 40.000 0.00 0.00 32.66 3.16
490 599 5.238583 ACTCCCTTCGTCTGAAATTACTTG 58.761 41.667 0.00 0.00 32.66 3.16
491 600 5.485209 ACTCCCTTCGTCTGAAATTACTT 57.515 39.130 0.00 0.00 32.66 2.24
492 601 5.105432 GGTACTCCCTTCGTCTGAAATTACT 60.105 44.000 0.00 0.00 32.66 2.24
493 602 5.105432 AGGTACTCCCTTCGTCTGAAATTAC 60.105 44.000 0.00 0.00 42.73 1.89
494 603 5.021458 AGGTACTCCCTTCGTCTGAAATTA 58.979 41.667 0.00 0.00 42.73 1.40
495 604 3.838903 AGGTACTCCCTTCGTCTGAAATT 59.161 43.478 0.00 0.00 42.73 1.82
496 605 3.442076 AGGTACTCCCTTCGTCTGAAAT 58.558 45.455 0.00 0.00 42.73 2.17
497 606 2.885616 AGGTACTCCCTTCGTCTGAAA 58.114 47.619 0.00 0.00 42.73 2.69
498 607 2.599408 AGGTACTCCCTTCGTCTGAA 57.401 50.000 0.00 0.00 42.73 3.02
510 619 5.296035 CAAATATTTGGGAACGGAGGTACTC 59.704 44.000 18.72 0.00 43.79 2.59
511 620 5.190677 CAAATATTTGGGAACGGAGGTACT 58.809 41.667 18.72 0.00 36.34 2.73
512 621 4.945543 ACAAATATTTGGGAACGGAGGTAC 59.054 41.667 27.43 0.00 42.34 3.34
513 622 5.045432 AGACAAATATTTGGGAACGGAGGTA 60.045 40.000 27.43 0.00 42.34 3.08
514 623 4.014406 GACAAATATTTGGGAACGGAGGT 58.986 43.478 27.43 6.71 42.34 3.85
515 624 4.270008 AGACAAATATTTGGGAACGGAGG 58.730 43.478 27.43 3.68 42.34 4.30
516 625 5.897377 AAGACAAATATTTGGGAACGGAG 57.103 39.130 27.43 4.34 42.34 4.63
517 626 6.007703 AGAAAGACAAATATTTGGGAACGGA 58.992 36.000 27.43 0.00 42.34 4.69
518 627 6.267496 AGAAAGACAAATATTTGGGAACGG 57.733 37.500 27.43 5.66 42.34 4.44
519 628 8.263940 TCTAGAAAGACAAATATTTGGGAACG 57.736 34.615 27.43 11.14 42.34 3.95
520 629 9.449719 TCTCTAGAAAGACAAATATTTGGGAAC 57.550 33.333 27.43 16.80 42.34 3.62
547 656 9.595823 CGTTCCCTAATATTTGTCTTTCTAGAA 57.404 33.333 0.00 0.00 30.65 2.10
548 657 8.202137 CCGTTCCCTAATATTTGTCTTTCTAGA 58.798 37.037 0.00 0.00 0.00 2.43
549 658 8.202137 TCCGTTCCCTAATATTTGTCTTTCTAG 58.798 37.037 0.00 0.00 0.00 2.43
550 659 8.081517 TCCGTTCCCTAATATTTGTCTTTCTA 57.918 34.615 0.00 0.00 0.00 2.10
551 660 6.954232 TCCGTTCCCTAATATTTGTCTTTCT 58.046 36.000 0.00 0.00 0.00 2.52
552 661 6.260271 CCTCCGTTCCCTAATATTTGTCTTTC 59.740 42.308 0.00 0.00 0.00 2.62
553 662 6.120220 CCTCCGTTCCCTAATATTTGTCTTT 58.880 40.000 0.00 0.00 0.00 2.52
554 663 5.397559 CCCTCCGTTCCCTAATATTTGTCTT 60.398 44.000 0.00 0.00 0.00 3.01
555 664 4.102681 CCCTCCGTTCCCTAATATTTGTCT 59.897 45.833 0.00 0.00 0.00 3.41
556 665 4.102054 TCCCTCCGTTCCCTAATATTTGTC 59.898 45.833 0.00 0.00 0.00 3.18
557 666 4.042174 TCCCTCCGTTCCCTAATATTTGT 58.958 43.478 0.00 0.00 0.00 2.83
558 667 4.102681 ACTCCCTCCGTTCCCTAATATTTG 59.897 45.833 0.00 0.00 0.00 2.32
559 668 4.304659 ACTCCCTCCGTTCCCTAATATTT 58.695 43.478 0.00 0.00 0.00 1.40
560 669 3.937751 ACTCCCTCCGTTCCCTAATATT 58.062 45.455 0.00 0.00 0.00 1.28
561 670 3.632420 ACTCCCTCCGTTCCCTAATAT 57.368 47.619 0.00 0.00 0.00 1.28
562 671 4.754411 ATACTCCCTCCGTTCCCTAATA 57.246 45.455 0.00 0.00 0.00 0.98
563 672 3.632420 ATACTCCCTCCGTTCCCTAAT 57.368 47.619 0.00 0.00 0.00 1.73
564 673 3.409804 AATACTCCCTCCGTTCCCTAA 57.590 47.619 0.00 0.00 0.00 2.69
565 674 3.036091 CAAATACTCCCTCCGTTCCCTA 58.964 50.000 0.00 0.00 0.00 3.53
566 675 1.838077 CAAATACTCCCTCCGTTCCCT 59.162 52.381 0.00 0.00 0.00 4.20
567 676 1.835531 TCAAATACTCCCTCCGTTCCC 59.164 52.381 0.00 0.00 0.00 3.97
568 677 3.840124 ATCAAATACTCCCTCCGTTCC 57.160 47.619 0.00 0.00 0.00 3.62
569 678 6.258068 CAGTTTATCAAATACTCCCTCCGTTC 59.742 42.308 0.00 0.00 0.00 3.95
570 679 6.113411 CAGTTTATCAAATACTCCCTCCGTT 58.887 40.000 0.00 0.00 0.00 4.44
571 680 5.671493 CAGTTTATCAAATACTCCCTCCGT 58.329 41.667 0.00 0.00 0.00 4.69
572 681 4.511826 GCAGTTTATCAAATACTCCCTCCG 59.488 45.833 0.00 0.00 0.00 4.63
573 682 4.822350 GGCAGTTTATCAAATACTCCCTCC 59.178 45.833 0.00 0.00 0.00 4.30
574 683 5.437060 TGGCAGTTTATCAAATACTCCCTC 58.563 41.667 0.00 0.00 0.00 4.30
575 684 5.450818 TGGCAGTTTATCAAATACTCCCT 57.549 39.130 0.00 0.00 0.00 4.20
576 685 6.524101 TTTGGCAGTTTATCAAATACTCCC 57.476 37.500 0.00 0.00 0.00 4.30
577 686 6.526674 CGTTTTGGCAGTTTATCAAATACTCC 59.473 38.462 0.00 0.00 31.60 3.85
580 689 5.061684 GGCGTTTTGGCAGTTTATCAAATAC 59.938 40.000 0.00 0.00 44.08 1.89
596 705 4.154556 TCCGTTCCTAAATAAGGCGTTTTG 59.845 41.667 0.00 0.00 46.10 2.44
602 711 2.172082 ACCCTCCGTTCCTAAATAAGGC 59.828 50.000 0.00 0.00 46.10 4.35
613 724 4.460731 ACTTTAGTAGTACACCCTCCGTTC 59.539 45.833 2.52 0.00 34.56 3.95
661 772 8.166422 ACTAGCTAATTGCAGTTACACTTTTT 57.834 30.769 0.00 0.00 45.94 1.94
662 773 7.745620 ACTAGCTAATTGCAGTTACACTTTT 57.254 32.000 0.00 0.00 45.94 2.27
673 784 9.834628 GTAAATTTGTGTTACTAGCTAATTGCA 57.165 29.630 0.00 0.00 45.94 4.08
700 814 3.246112 TGGGACCCCCTGTCAACG 61.246 66.667 8.45 0.00 46.38 4.10
843 959 2.561037 GGAAAGTTGGCGTGGGGTG 61.561 63.158 0.00 0.00 0.00 4.61
844 960 2.203437 GGAAAGTTGGCGTGGGGT 60.203 61.111 0.00 0.00 0.00 4.95
845 961 1.395826 TTTGGAAAGTTGGCGTGGGG 61.396 55.000 0.00 0.00 0.00 4.96
859 975 1.529713 GTCCGGGGTGCTTTTTGGA 60.530 57.895 0.00 0.00 0.00 3.53
916 1032 2.108157 TGACAGTGCGTGTGACCC 59.892 61.111 0.00 0.00 40.56 4.46
919 1035 1.520564 GGTGTGACAGTGCGTGTGA 60.521 57.895 0.00 0.00 40.56 3.58
999 1128 1.488957 GCTCGCTGTGTCGTCTTTG 59.511 57.895 0.00 0.00 0.00 2.77
1045 1174 3.005540 GCCATTTTCGTGCCCCTGG 62.006 63.158 0.00 0.00 0.00 4.45
1046 1175 2.573340 GCCATTTTCGTGCCCCTG 59.427 61.111 0.00 0.00 0.00 4.45
1425 1665 5.179555 GGATTACTCTAAATTAGGCCAAGCG 59.820 44.000 5.01 0.00 0.00 4.68
1449 1689 3.254060 CACGATCTAATTATGAGCCCCG 58.746 50.000 0.00 0.00 0.00 5.73
1660 2533 3.505680 TGAAGCTTACAATCCAATTGCGT 59.494 39.130 0.00 0.00 43.98 5.24
1695 2568 4.305989 ACGCAACATCATGAAAACAGTT 57.694 36.364 0.00 0.00 0.00 3.16
1715 2588 6.712547 AGCCAGTAATAAAGCTATCATCCAAC 59.287 38.462 0.00 0.00 32.73 3.77
1820 2693 1.981256 ACAACCAATCTGGGTCACAC 58.019 50.000 0.00 0.00 43.37 3.82
1978 2854 1.039068 CACCACACATTTGGCTCCAA 58.961 50.000 0.00 0.00 40.77 3.53
2230 3126 3.058016 TCAGTGCTACCTGTACGTTACAC 60.058 47.826 0.00 0.00 36.37 2.90
2495 3397 3.211045 TCTTTCCTCCAAAAACTGACCG 58.789 45.455 0.00 0.00 0.00 4.79
2621 3523 9.778741 TTTGATACTCAAAACTACTGATCTGTT 57.221 29.630 10.76 0.00 42.72 3.16
2678 3580 6.882656 AGCATTAGTTGAAGCAGAGATTAGA 58.117 36.000 0.00 0.00 0.00 2.10
2708 3694 4.499183 GTTCTACTGTGTCCCTGATGAAG 58.501 47.826 0.00 0.00 0.00 3.02
2844 3831 7.879677 TGAAAGAAACTGAGAGATTCTTGCATA 59.120 33.333 11.19 0.00 43.48 3.14
2985 3979 2.159382 AGGGCACAAACAAATCTACGG 58.841 47.619 0.00 0.00 0.00 4.02
3172 4166 2.122768 CTCCTCCAAGGTCCAGCTAAT 58.877 52.381 0.00 0.00 36.53 1.73
3186 4180 2.328099 CGTTGGTTGCAGCTCCTCC 61.328 63.158 0.00 0.22 0.00 4.30
3187 4181 2.328099 CCGTTGGTTGCAGCTCCTC 61.328 63.158 0.00 0.00 0.00 3.71
3188 4182 2.281761 CCGTTGGTTGCAGCTCCT 60.282 61.111 0.00 0.00 0.00 3.69
3283 4282 0.183492 AGAAAGGCAAGGCACAGACA 59.817 50.000 0.00 0.00 0.00 3.41
3289 4288 4.588528 AGAAACAATTAGAAAGGCAAGGCA 59.411 37.500 0.00 0.00 0.00 4.75
3540 4541 7.094762 GCTACACAAAACAGGAATACTAAAGCT 60.095 37.037 0.00 0.00 0.00 3.74
3623 4624 5.878669 TCATTCACTCCATCAGTCAAATCAG 59.121 40.000 0.00 0.00 30.26 2.90
3977 4981 0.798776 CTGCATCAACGAACCAGACC 59.201 55.000 0.00 0.00 0.00 3.85
4317 5322 8.686334 CCCTAAACTACAAGATGCAAATAACAT 58.314 33.333 0.00 0.00 0.00 2.71
4382 5387 3.499338 TGAAACAGGCTCATCACCAAAT 58.501 40.909 0.00 0.00 0.00 2.32
4422 5427 1.688772 ACTGCAGATTGGATCATGCC 58.311 50.000 23.35 0.00 34.61 4.40
4453 5458 5.455392 GCATGCATTTGTATCACACCTATC 58.545 41.667 14.21 0.00 0.00 2.08
4522 5527 7.118723 TCTCCTGCACATCCACTAAAATTATT 58.881 34.615 0.00 0.00 0.00 1.40
4544 5549 6.094048 TGCTGAAATTACAGTAGCCATTTCTC 59.906 38.462 13.70 8.58 39.73 2.87
4545 5550 5.945784 TGCTGAAATTACAGTAGCCATTTCT 59.054 36.000 13.70 0.00 39.73 2.52
4799 5804 6.264744 GCAGTGTAGTGGGTTATATAGTCTCA 59.735 42.308 0.00 0.00 0.00 3.27
5009 6254 5.270853 ACAACTAAACAGCAAAAGCTAACG 58.729 37.500 0.00 0.00 0.00 3.18
5040 6285 7.455447 CGCAAAAATTTATGAATTGACTTCCC 58.545 34.615 4.16 0.00 35.69 3.97
5148 6393 1.014564 GTGGCCTTTCCTCTTCGACG 61.015 60.000 3.32 0.00 35.26 5.12
5202 6447 3.714798 TGGTAGGAGGTGAAACAACTTCT 59.285 43.478 3.08 3.08 40.58 2.85
5227 6472 1.699634 ACCAGTATCAGCCACAACAGT 59.300 47.619 0.00 0.00 0.00 3.55
5432 6677 7.022979 TGATTAAGCAACATCATTGAAAGTCG 58.977 34.615 0.00 0.00 0.00 4.18
5463 6708 8.454106 ACATACAGATGCAAAAAGAACTATCAC 58.546 33.333 0.00 0.00 36.43 3.06
5472 6717 7.584123 GCGTCTAATACATACAGATGCAAAAAG 59.416 37.037 9.52 0.00 46.13 2.27
5799 7046 3.258228 CAATCAATACAAAAACGCCCCC 58.742 45.455 0.00 0.00 0.00 5.40
5909 7157 4.027437 ACAACAAAGCCTTTAGTCCCAAA 58.973 39.130 0.00 0.00 0.00 3.28
5917 7165 6.038936 GGTTCTCTACAACAACAAAGCCTTTA 59.961 38.462 0.00 0.00 0.00 1.85
6011 7259 7.011950 TGCGTCAAACTAACAGAATAATATGGG 59.988 37.037 0.00 0.00 0.00 4.00
6035 7296 3.495001 GTGTACTTTCAGAGGAGTTGTGC 59.505 47.826 0.00 0.00 0.00 4.57
6055 7324 8.545420 ACAGTTTTCTAACTTGTTATACACGTG 58.455 33.333 15.48 15.48 41.85 4.49
6057 7326 9.365311 CAACAGTTTTCTAACTTGTTATACACG 57.635 33.333 0.00 0.00 41.85 4.49
6100 7369 5.007385 ACTCACCGTCCTCACAAATATAC 57.993 43.478 0.00 0.00 0.00 1.47
6153 7422 3.009723 CACAACCTAACATGCCTACTGG 58.990 50.000 0.00 0.00 0.00 4.00
6190 7865 4.220693 TCTGCATGGTAAATGTAGTGCT 57.779 40.909 0.00 0.00 34.15 4.40
6287 7962 3.423206 CAGAGCAAAGCATCAACGAAAAC 59.577 43.478 0.00 0.00 0.00 2.43
6304 7979 3.667960 CGGAACAGCAACAATTACAGAGC 60.668 47.826 0.00 0.00 0.00 4.09
6320 7995 1.116308 TGGTGACTCAAGACGGAACA 58.884 50.000 0.00 0.00 0.00 3.18
6373 8048 3.221771 GTCATGGGTATAATGCAGGCAA 58.778 45.455 0.00 0.00 0.00 4.52
6389 8064 3.827008 ACCACACTAGCCTATGTCATG 57.173 47.619 0.00 0.00 0.00 3.07
6532 8214 3.117512 CCCCATACCCTTGCATTCTTAGT 60.118 47.826 0.00 0.00 0.00 2.24
6586 8268 6.183360 GGGATATAAATAGACATGCGCAGTTC 60.183 42.308 18.32 14.68 0.00 3.01
6620 8302 0.044855 ACCCCACTGGCTAGAGGAAT 59.955 55.000 15.18 0.00 36.86 3.01
6706 8389 1.710013 ACACTTACAATCGGCGACTG 58.290 50.000 17.57 17.57 0.00 3.51
6711 8394 3.871594 AGATGCTTACACTTACAATCGGC 59.128 43.478 0.00 0.00 0.00 5.54
6738 8421 0.526211 ACGAGAACATAGAGCACGCA 59.474 50.000 0.00 0.00 0.00 5.24
6744 8427 1.776662 TGGGGGACGAGAACATAGAG 58.223 55.000 0.00 0.00 0.00 2.43
6748 8431 0.620410 TGGATGGGGGACGAGAACAT 60.620 55.000 0.00 0.00 0.00 2.71
6757 8440 0.417437 TCTGACTCTTGGATGGGGGA 59.583 55.000 0.00 0.00 0.00 4.81
6770 8453 5.207354 TCTGAATCTATTGGAGCTCTGACT 58.793 41.667 14.64 0.00 0.00 3.41
6822 8505 5.604231 TGTGCTCTTAATATCACTCAGGGAT 59.396 40.000 0.00 0.00 0.00 3.85
6823 8506 4.962362 TGTGCTCTTAATATCACTCAGGGA 59.038 41.667 0.00 0.00 0.00 4.20
6847 8530 6.972901 GGGCATAGAAGTTTACACATTAAAGC 59.027 38.462 0.00 0.00 0.00 3.51
6851 8534 5.588648 GCAGGGCATAGAAGTTTACACATTA 59.411 40.000 0.00 0.00 0.00 1.90
6852 8535 4.399303 GCAGGGCATAGAAGTTTACACATT 59.601 41.667 0.00 0.00 0.00 2.71
6869 8576 4.488790 CCATACTGATGGCAGGGC 57.511 61.111 0.00 0.00 46.30 5.19
6878 8585 0.894835 TCGCACAAGCTCCATACTGA 59.105 50.000 0.00 0.00 39.10 3.41
6919 8626 5.413523 GGAATGCACACATCATAGCATCATA 59.586 40.000 0.00 0.00 46.10 2.15
6925 8632 2.300433 TGGGAATGCACACATCATAGC 58.700 47.619 0.00 0.00 34.62 2.97
6971 8680 4.504461 CAGTAAATGAGACATACGCCAGAC 59.496 45.833 0.00 0.00 0.00 3.51
6993 8702 7.836842 ACACAGTGTAATGACTATACATGACA 58.163 34.615 3.69 0.00 38.75 3.58
6994 8703 8.703604 AACACAGTGTAATGACTATACATGAC 57.296 34.615 6.63 0.00 35.84 3.06
7042 8752 2.100087 GCCTACTGAGAGAGTACAAGGC 59.900 54.545 0.00 0.00 43.57 4.35
7055 8765 5.358442 GAATCTACTTCAGACAGCCTACTGA 59.642 44.000 0.00 0.00 39.76 3.41
7056 8766 5.126222 TGAATCTACTTCAGACAGCCTACTG 59.874 44.000 0.00 0.00 43.17 2.74
7057 8767 5.265191 TGAATCTACTTCAGACAGCCTACT 58.735 41.667 0.00 0.00 38.97 2.57
7058 8768 5.584253 TGAATCTACTTCAGACAGCCTAC 57.416 43.478 0.00 0.00 38.97 3.18
7116 8829 2.033299 ACACTTTCAACTGCATGGAACG 59.967 45.455 0.00 0.00 0.00 3.95
7163 8876 8.035394 GTGGAAGACTATCAAGACAGATTAACA 58.965 37.037 0.00 0.00 0.00 2.41
7195 8908 6.419710 CCGGTTTAAAATCCTTTGTCAAGAAC 59.580 38.462 0.00 0.00 30.57 3.01
7198 8911 6.079424 TCCGGTTTAAAATCCTTTGTCAAG 57.921 37.500 0.00 0.00 0.00 3.02
7200 8913 5.536916 ACATCCGGTTTAAAATCCTTTGTCA 59.463 36.000 0.00 0.00 0.00 3.58
7201 8914 6.020971 ACATCCGGTTTAAAATCCTTTGTC 57.979 37.500 0.00 0.00 0.00 3.18
7266 8980 5.880054 ACTAATACAATCAACAGTGCACC 57.120 39.130 14.63 0.00 0.00 5.01
7269 8983 9.289303 CCATAAAACTAATACAATCAACAGTGC 57.711 33.333 0.00 0.00 0.00 4.40
7302 9016 6.976934 AAATAAGGGCTCAAGAGAAAAACA 57.023 33.333 0.32 0.00 0.00 2.83
7329 9043 5.489249 TGATAATGCCTTACGTTGTTACCA 58.511 37.500 0.00 0.00 0.00 3.25
7357 9071 9.023962 TGCTAACAATCCAAAGAAACTGATAAT 57.976 29.630 0.00 0.00 0.00 1.28
7359 9073 7.994425 TGCTAACAATCCAAAGAAACTGATA 57.006 32.000 0.00 0.00 0.00 2.15
7360 9074 6.899393 TGCTAACAATCCAAAGAAACTGAT 57.101 33.333 0.00 0.00 0.00 2.90
7361 9075 6.707440 TTGCTAACAATCCAAAGAAACTGA 57.293 33.333 0.00 0.00 0.00 3.41
7362 9076 7.769272 TTTTGCTAACAATCCAAAGAAACTG 57.231 32.000 0.00 0.00 35.21 3.16
7364 9078 7.440856 TCCATTTTGCTAACAATCCAAAGAAAC 59.559 33.333 0.00 0.00 35.21 2.78
7365 9079 7.504403 TCCATTTTGCTAACAATCCAAAGAAA 58.496 30.769 0.00 0.00 35.21 2.52
7367 9081 6.662865 TCCATTTTGCTAACAATCCAAAGA 57.337 33.333 0.00 0.00 35.21 2.52
7368 9082 7.910441 AATCCATTTTGCTAACAATCCAAAG 57.090 32.000 0.00 0.00 35.21 2.77
7369 9083 8.156165 AGAAATCCATTTTGCTAACAATCCAAA 58.844 29.630 0.00 0.00 35.21 3.28
7370 9084 7.678837 AGAAATCCATTTTGCTAACAATCCAA 58.321 30.769 0.00 0.00 35.21 3.53
7371 9085 7.243604 AGAAATCCATTTTGCTAACAATCCA 57.756 32.000 0.00 0.00 35.21 3.41
7372 9086 8.470002 AGTAGAAATCCATTTTGCTAACAATCC 58.530 33.333 0.00 0.00 35.21 3.01
7373 9087 9.860898 AAGTAGAAATCCATTTTGCTAACAATC 57.139 29.630 0.00 0.00 35.21 2.67
7389 9103 9.914131 AGCTTTTCACCAAATAAAGTAGAAATC 57.086 29.630 0.00 0.00 32.75 2.17
7426 9140 7.386025 AGAGTTGATGAAATTTAAGGCTTTTGC 59.614 33.333 4.45 0.00 46.64 3.68
7427 9141 8.822652 AGAGTTGATGAAATTTAAGGCTTTTG 57.177 30.769 4.45 0.00 0.00 2.44
7432 9146 7.486232 GCAAGTAGAGTTGATGAAATTTAAGGC 59.514 37.037 1.16 0.00 0.00 4.35
7433 9147 8.514594 TGCAAGTAGAGTTGATGAAATTTAAGG 58.485 33.333 1.16 0.00 0.00 2.69
7444 9158 2.026822 CCACCCTGCAAGTAGAGTTGAT 60.027 50.000 1.16 0.00 0.00 2.57
7445 9159 1.347707 CCACCCTGCAAGTAGAGTTGA 59.652 52.381 1.16 0.00 0.00 3.18
7448 9162 0.687354 CACCACCCTGCAAGTAGAGT 59.313 55.000 0.00 0.00 0.00 3.24
7454 9168 4.290622 AGCCCACCACCCTGCAAG 62.291 66.667 0.00 0.00 0.00 4.01
7573 9287 0.999406 CGACATCGCAAAAGGATCGT 59.001 50.000 0.00 0.00 0.00 3.73
7583 9297 1.131618 CGACGTGATTCGACATCGCA 61.132 55.000 16.12 0.00 41.78 5.10
7719 9433 2.769652 TTTACTGCTGCAGGGCCAGG 62.770 60.000 31.00 7.89 35.51 4.45
7720 9434 1.303561 TTTACTGCTGCAGGGCCAG 60.304 57.895 31.00 16.29 35.51 4.85
7721 9435 1.603455 GTTTACTGCTGCAGGGCCA 60.603 57.895 31.00 12.22 35.51 5.36
7830 9547 6.205270 GGTATACTATTAGCTCCTCGCCTATC 59.795 46.154 2.25 0.00 40.39 2.08
8055 9773 0.385473 CGAAATGCTCGCCGTTTTGT 60.385 50.000 0.00 0.00 41.49 2.83
8056 9774 2.339047 CGAAATGCTCGCCGTTTTG 58.661 52.632 0.00 0.00 41.49 2.44
8057 9775 4.838959 CGAAATGCTCGCCGTTTT 57.161 50.000 0.00 0.00 41.49 2.43
8068 9789 3.872354 TGACAAAAGAACGAGCGAAATG 58.128 40.909 0.00 0.00 0.00 2.32
8084 9805 3.029320 GCAATTGAACAGCCATGACAA 57.971 42.857 10.34 0.00 33.62 3.18
8098 9819 3.028850 AGAATGTGGGAGATGGCAATTG 58.971 45.455 0.00 0.00 0.00 2.32
8132 9853 7.391554 AGTGTGCAAGAGATAACATGTTAACAT 59.608 33.333 21.57 15.47 36.96 2.71
8133 9854 6.710295 AGTGTGCAAGAGATAACATGTTAACA 59.290 34.615 21.57 11.41 0.00 2.41
8134 9855 7.133891 AGTGTGCAAGAGATAACATGTTAAC 57.866 36.000 21.57 18.56 0.00 2.01
8135 9856 7.228507 ACAAGTGTGCAAGAGATAACATGTTAA 59.771 33.333 21.57 6.33 0.00 2.01
8136 9857 6.710295 ACAAGTGTGCAAGAGATAACATGTTA 59.290 34.615 20.14 20.14 0.00 2.41
8137 9858 5.532406 ACAAGTGTGCAAGAGATAACATGTT 59.468 36.000 16.68 16.68 0.00 2.71
8138 9859 5.065914 ACAAGTGTGCAAGAGATAACATGT 58.934 37.500 0.00 0.00 0.00 3.21
8139 9860 5.410746 AGACAAGTGTGCAAGAGATAACATG 59.589 40.000 0.00 0.00 0.00 3.21
8140 9861 5.555017 AGACAAGTGTGCAAGAGATAACAT 58.445 37.500 0.00 0.00 0.00 2.71
8141 9862 4.960938 AGACAAGTGTGCAAGAGATAACA 58.039 39.130 0.00 0.00 0.00 2.41
8142 9863 7.459486 CATTAGACAAGTGTGCAAGAGATAAC 58.541 38.462 0.00 0.00 0.00 1.89
8143 9864 6.092670 GCATTAGACAAGTGTGCAAGAGATAA 59.907 38.462 0.00 0.00 35.93 1.75
8144 9865 5.582269 GCATTAGACAAGTGTGCAAGAGATA 59.418 40.000 0.00 0.00 35.93 1.98
8145 9866 4.394300 GCATTAGACAAGTGTGCAAGAGAT 59.606 41.667 0.00 0.00 35.93 2.75
8146 9867 3.748048 GCATTAGACAAGTGTGCAAGAGA 59.252 43.478 0.00 0.00 35.93 3.10
8147 9868 3.120060 GGCATTAGACAAGTGTGCAAGAG 60.120 47.826 0.00 0.00 37.53 2.85
8148 9869 2.813754 GGCATTAGACAAGTGTGCAAGA 59.186 45.455 0.00 0.00 37.53 3.02
8149 9870 2.553602 TGGCATTAGACAAGTGTGCAAG 59.446 45.455 0.00 0.00 37.53 4.01
8150 9871 2.580962 TGGCATTAGACAAGTGTGCAA 58.419 42.857 0.00 0.00 37.53 4.08
8151 9872 2.268762 TGGCATTAGACAAGTGTGCA 57.731 45.000 0.00 0.00 37.53 4.57
8152 9873 2.098117 GGATGGCATTAGACAAGTGTGC 59.902 50.000 0.00 0.00 35.50 4.57
8153 9874 3.614092 AGGATGGCATTAGACAAGTGTG 58.386 45.455 0.00 0.00 35.50 3.82
8154 9875 3.370953 GGAGGATGGCATTAGACAAGTGT 60.371 47.826 0.00 0.00 35.50 3.55
8155 9876 3.118112 AGGAGGATGGCATTAGACAAGTG 60.118 47.826 0.00 0.00 35.50 3.16
8156 9877 3.118112 CAGGAGGATGGCATTAGACAAGT 60.118 47.826 0.00 0.00 35.50 3.16
8157 9878 3.474600 CAGGAGGATGGCATTAGACAAG 58.525 50.000 0.00 0.00 35.50 3.16
8158 9879 2.173356 CCAGGAGGATGGCATTAGACAA 59.827 50.000 0.00 0.00 35.50 3.18
8159 9880 1.770658 CCAGGAGGATGGCATTAGACA 59.229 52.381 0.00 0.00 37.03 3.41
8160 9881 2.557920 CCAGGAGGATGGCATTAGAC 57.442 55.000 0.00 0.00 36.89 2.59
8246 10028 4.275936 ACAGTTCAGCCATCAAAGTGTAAC 59.724 41.667 0.00 0.00 35.39 2.50
8248 10030 4.065088 GACAGTTCAGCCATCAAAGTGTA 58.935 43.478 0.00 0.00 36.85 2.90
8249 10031 2.880890 GACAGTTCAGCCATCAAAGTGT 59.119 45.455 0.00 0.00 38.82 3.55
8250 10032 2.227388 GGACAGTTCAGCCATCAAAGTG 59.773 50.000 0.00 0.00 0.00 3.16
8254 10036 1.271543 CCAGGACAGTTCAGCCATCAA 60.272 52.381 0.00 0.00 0.00 2.57
8268 10050 3.133003 TCAGCAAGTAGATTAGCCAGGAC 59.867 47.826 0.00 0.00 0.00 3.85
8291 10073 6.094464 GGACAGCCGGTAAAAGTTTACATAAT 59.906 38.462 14.23 0.00 43.64 1.28
8305 10087 4.004982 GAGTTTATTTTGGACAGCCGGTA 58.995 43.478 1.90 0.00 36.79 4.02
8440 10222 0.317160 TACAGTCACTGGTCCTTGCG 59.683 55.000 10.28 0.00 35.51 4.85
8499 10281 2.148558 GATCAGCTCCCGTCGATCCC 62.149 65.000 0.00 0.00 0.00 3.85
8566 10348 6.099125 TGAGATATTGTAATTTGAGACCCGGA 59.901 38.462 0.73 0.00 0.00 5.14
8630 10412 0.881796 TGAGACGAGACGACAAGCAT 59.118 50.000 0.00 0.00 0.00 3.79
8644 10426 5.705609 TGCTTTTCTTTAACCCATGAGAC 57.294 39.130 0.00 0.00 0.00 3.36
8672 10464 5.300752 TGGTGTTGAAGATTCTTCTGTCTC 58.699 41.667 23.29 14.54 30.72 3.36
8733 10531 1.802365 GTTACGCTAGGTTGTGGGTTG 59.198 52.381 0.00 0.00 0.00 3.77
8735 10533 1.050204 TGTTACGCTAGGTTGTGGGT 58.950 50.000 0.00 0.00 0.00 4.51
8737 10535 2.006888 CCATGTTACGCTAGGTTGTGG 58.993 52.381 0.00 0.00 0.00 4.17
8738 10536 1.396996 GCCATGTTACGCTAGGTTGTG 59.603 52.381 0.00 0.00 0.00 3.33
8739 10537 1.278127 AGCCATGTTACGCTAGGTTGT 59.722 47.619 0.00 0.00 32.26 3.32
8741 10539 2.498481 TGTAGCCATGTTACGCTAGGTT 59.502 45.455 2.10 0.00 38.23 3.50
8743 10541 2.470821 GTGTAGCCATGTTACGCTAGG 58.529 52.381 2.10 0.00 38.23 3.02
8745 10543 1.473677 ACGTGTAGCCATGTTACGCTA 59.526 47.619 13.17 6.88 37.55 4.26
8746 10544 0.245539 ACGTGTAGCCATGTTACGCT 59.754 50.000 13.17 7.70 37.55 5.07
8747 10545 1.585214 GTACGTGTAGCCATGTTACGC 59.415 52.381 0.00 7.68 41.12 4.42
8748 10546 1.841944 CGTACGTGTAGCCATGTTACG 59.158 52.381 7.22 0.00 41.12 3.18
8749 10547 3.135414 TCGTACGTGTAGCCATGTTAC 57.865 47.619 16.05 0.00 41.12 2.50
8771 10569 2.955660 CCTACAGAAGCTAGGAGGACAG 59.044 54.545 6.20 0.00 33.65 3.51
8783 10581 1.131883 CCCACGTACGACCTACAGAAG 59.868 57.143 24.41 0.00 0.00 2.85
8786 10584 0.169672 CACCCACGTACGACCTACAG 59.830 60.000 24.41 5.53 0.00 2.74
8792 10590 2.570181 CTCCCACCCACGTACGAC 59.430 66.667 24.41 0.00 0.00 4.34
8793 10591 2.677524 CCTCCCACCCACGTACGA 60.678 66.667 24.41 0.00 0.00 3.43
8795 10593 2.605601 ACCCTCCCACCCACGTAC 60.606 66.667 0.00 0.00 0.00 3.67
8796 10594 2.605295 CACCCTCCCACCCACGTA 60.605 66.667 0.00 0.00 0.00 3.57
8800 10598 2.286121 GATCCACCCTCCCACCCA 60.286 66.667 0.00 0.00 0.00 4.51
8801 10599 2.042930 AGATCCACCCTCCCACCC 59.957 66.667 0.00 0.00 0.00 4.61
8828 10641 4.254709 ACCTGCTCACCTGCGCAA 62.255 61.111 13.05 0.00 35.16 4.85
8829 10642 4.994471 CACCTGCTCACCTGCGCA 62.994 66.667 10.98 10.98 34.31 6.09
8830 10643 4.687215 TCACCTGCTCACCTGCGC 62.687 66.667 0.00 0.00 35.36 6.09
8831 10644 1.364626 GATTCACCTGCTCACCTGCG 61.365 60.000 0.00 0.00 35.36 5.18
8832 10645 0.035630 AGATTCACCTGCTCACCTGC 60.036 55.000 0.00 0.00 0.00 4.85
8833 10646 1.406614 GGAGATTCACCTGCTCACCTG 60.407 57.143 0.00 0.00 0.00 4.00
8834 10647 0.908198 GGAGATTCACCTGCTCACCT 59.092 55.000 0.00 0.00 0.00 4.00
8835 10648 0.908198 AGGAGATTCACCTGCTCACC 59.092 55.000 1.44 0.00 36.30 4.02
8868 10681 1.146263 GGAGTTACCGGATGCCTGG 59.854 63.158 9.46 0.00 44.64 4.45
8869 10682 0.541863 AAGGAGTTACCGGATGCCTG 59.458 55.000 9.46 0.00 44.74 4.85
8870 10683 0.541863 CAAGGAGTTACCGGATGCCT 59.458 55.000 9.46 4.20 44.74 4.75
8871 10684 0.539986 TCAAGGAGTTACCGGATGCC 59.460 55.000 9.46 1.49 44.74 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.