Multiple sequence alignment - TraesCS1B01G388100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G388100 chr1B 100.000 5251 0 0 1 5251 622188499 622183249 0.000000e+00 9697
1 TraesCS1B01G388100 chr1B 86.453 2244 268 24 1431 3661 585882356 585884576 0.000000e+00 2427
2 TraesCS1B01G388100 chr1B 84.956 904 99 19 21 911 551720423 551721302 0.000000e+00 881
3 TraesCS1B01G388100 chr1B 81.662 349 50 5 4029 4376 585884753 585885088 1.440000e-70 278
4 TraesCS1B01G388100 chr1B 97.600 125 3 0 4550 4674 137651558 137651682 1.150000e-51 215
5 TraesCS1B01G388100 chr1D 94.635 3840 136 24 23 3820 452340676 452344487 0.000000e+00 5886
6 TraesCS1B01G388100 chr1D 86.448 2258 255 33 1431 3662 433516610 433518842 0.000000e+00 2427
7 TraesCS1B01G388100 chr1D 93.639 676 35 2 3882 4557 452344726 452345393 0.000000e+00 1003
8 TraesCS1B01G388100 chr1D 82.431 831 93 27 90 911 409534822 409535608 0.000000e+00 676
9 TraesCS1B01G388100 chr1D 85.606 264 38 0 4029 4292 433519198 433519461 1.440000e-70 278
10 TraesCS1B01G388100 chr1D 82.544 338 36 15 84 417 453639552 453639870 5.180000e-70 276
11 TraesCS1B01G388100 chr1D 80.702 228 28 8 4668 4883 452345394 452345617 4.210000e-36 163
12 TraesCS1B01G388100 chr1A 96.545 3242 98 6 1321 4562 547255037 547258264 0.000000e+00 5354
13 TraesCS1B01G388100 chr1A 88.018 2003 204 24 1667 3662 532103565 532105538 0.000000e+00 2337
14 TraesCS1B01G388100 chr1A 93.587 1497 64 11 22 1497 547253557 547255042 0.000000e+00 2204
15 TraesCS1B01G388100 chr1A 89.681 659 51 8 22 677 547241451 547242095 0.000000e+00 824
16 TraesCS1B01G388100 chr1A 89.378 659 54 8 22 677 547219560 547220205 0.000000e+00 815
17 TraesCS1B01G388100 chr1A 88.922 334 32 3 4919 5251 547274886 547275215 1.760000e-109 407
18 TraesCS1B01G388100 chr1A 87.591 137 17 0 1010 1146 532102433 532102569 5.440000e-35 159
19 TraesCS1B01G388100 chr3B 91.653 2492 176 12 1278 3753 256786968 256784493 0.000000e+00 3421
20 TraesCS1B01G388100 chr3B 85.801 662 63 11 3897 4554 256784268 256783634 0.000000e+00 673
21 TraesCS1B01G388100 chr3B 85.397 315 35 10 948 1262 256787258 256786955 3.050000e-82 316
22 TraesCS1B01G388100 chr3B 96.000 125 5 0 4554 4678 31105778 31105654 2.480000e-48 204
23 TraesCS1B01G388100 chr3A 91.586 2484 170 11 1278 3742 219800928 219798465 0.000000e+00 3393
24 TraesCS1B01G388100 chr3A 87.543 875 93 10 3685 4554 219798403 219797540 0.000000e+00 998
25 TraesCS1B01G388100 chr3A 84.726 419 46 11 148 563 64286000 64285597 2.280000e-108 403
26 TraesCS1B01G388100 chr3A 86.120 317 33 9 948 1263 219801220 219800914 1.090000e-86 331
27 TraesCS1B01G388100 chr3D 93.360 2214 132 8 1423 3632 178535687 178533485 0.000000e+00 3260
28 TraesCS1B01G388100 chr3D 87.818 747 75 10 3814 4554 178533297 178532561 0.000000e+00 861
29 TraesCS1B01G388100 chr3D 86.728 324 33 8 944 1267 178537124 178536811 8.370000e-93 351
30 TraesCS1B01G388100 chr3D 90.164 122 12 0 4732 4853 2403163 2403042 5.440000e-35 159
31 TraesCS1B01G388100 chr5B 94.274 1013 52 6 914 1922 239396320 239395310 0.000000e+00 1544
32 TraesCS1B01G388100 chr5B 82.270 925 99 38 10 914 472746156 472745277 0.000000e+00 739
33 TraesCS1B01G388100 chr2B 92.998 814 51 4 1049 1856 184125033 184124220 0.000000e+00 1182
34 TraesCS1B01G388100 chr2B 95.000 140 7 0 914 1053 184132847 184132708 2.460000e-53 220
35 TraesCS1B01G388100 chr2B 86.822 129 16 1 4725 4853 458249244 458249371 5.480000e-30 143
36 TraesCS1B01G388100 chr6A 85.083 905 104 20 10 911 579956623 579955747 0.000000e+00 894
37 TraesCS1B01G388100 chr6A 91.549 142 8 4 4550 4691 616748241 616748378 5.370000e-45 193
38 TraesCS1B01G388100 chr6D 84.895 907 103 17 10 911 433769526 433768649 0.000000e+00 885
39 TraesCS1B01G388100 chr2A 90.551 508 40 4 928 1428 203826129 203825623 0.000000e+00 665
40 TraesCS1B01G388100 chr2A 89.516 124 12 1 4726 4849 753527207 753527329 7.040000e-34 156
41 TraesCS1B01G388100 chr7B 80.094 638 103 14 1431 2059 637024839 637025461 2.230000e-123 453
42 TraesCS1B01G388100 chr7B 93.431 137 9 0 4540 4676 179039656 179039792 2.480000e-48 204
43 TraesCS1B01G388100 chr7B 90.000 120 12 0 4733 4852 110875029 110875148 7.040000e-34 156
44 TraesCS1B01G388100 chr7B 88.525 122 14 0 4729 4850 541693450 541693571 1.180000e-31 148
45 TraesCS1B01G388100 chrUn 90.698 301 21 4 22 320 1064701 1064406 1.370000e-105 394
46 TraesCS1B01G388100 chr5D 98.319 119 2 0 4554 4672 532749819 532749701 5.330000e-50 209
47 TraesCS1B01G388100 chr5D 88.430 121 14 0 4730 4850 134475501 134475621 4.240000e-31 147
48 TraesCS1B01G388100 chr7A 93.571 140 7 2 4547 4685 491263286 491263148 1.920000e-49 207
49 TraesCS1B01G388100 chr4B 97.521 121 3 0 4553 4673 15419011 15418891 1.920000e-49 207
50 TraesCS1B01G388100 chr4B 95.161 124 6 0 4553 4676 488345375 488345252 4.150000e-46 196
51 TraesCS1B01G388100 chr6B 94.656 131 6 1 4548 4677 7154319 7154449 8.920000e-48 202
52 TraesCS1B01G388100 chr6B 95.041 121 6 0 4726 4846 542588598 542588718 1.930000e-44 191
53 TraesCS1B01G388100 chr4D 90.164 122 11 1 4733 4854 502404749 502404869 1.960000e-34 158
54 TraesCS1B01G388100 chr4D 88.000 125 14 1 4729 4853 324235223 324235100 4.240000e-31 147


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G388100 chr1B 622183249 622188499 5250 True 9697.000000 9697 100.000000 1 5251 1 chr1B.!!$R1 5250
1 TraesCS1B01G388100 chr1B 585882356 585885088 2732 False 1352.500000 2427 84.057500 1431 4376 2 chr1B.!!$F3 2945
2 TraesCS1B01G388100 chr1B 551720423 551721302 879 False 881.000000 881 84.956000 21 911 1 chr1B.!!$F2 890
3 TraesCS1B01G388100 chr1D 452340676 452345617 4941 False 2350.666667 5886 89.658667 23 4883 3 chr1D.!!$F4 4860
4 TraesCS1B01G388100 chr1D 433516610 433519461 2851 False 1352.500000 2427 86.027000 1431 4292 2 chr1D.!!$F3 2861
5 TraesCS1B01G388100 chr1D 409534822 409535608 786 False 676.000000 676 82.431000 90 911 1 chr1D.!!$F1 821
6 TraesCS1B01G388100 chr1A 547253557 547258264 4707 False 3779.000000 5354 95.066000 22 4562 2 chr1A.!!$F5 4540
7 TraesCS1B01G388100 chr1A 532102433 532105538 3105 False 1248.000000 2337 87.804500 1010 3662 2 chr1A.!!$F4 2652
8 TraesCS1B01G388100 chr1A 547241451 547242095 644 False 824.000000 824 89.681000 22 677 1 chr1A.!!$F2 655
9 TraesCS1B01G388100 chr1A 547219560 547220205 645 False 815.000000 815 89.378000 22 677 1 chr1A.!!$F1 655
10 TraesCS1B01G388100 chr3B 256783634 256787258 3624 True 1470.000000 3421 87.617000 948 4554 3 chr3B.!!$R2 3606
11 TraesCS1B01G388100 chr3A 219797540 219801220 3680 True 1574.000000 3393 88.416333 948 4554 3 chr3A.!!$R2 3606
12 TraesCS1B01G388100 chr3D 178532561 178537124 4563 True 1490.666667 3260 89.302000 944 4554 3 chr3D.!!$R2 3610
13 TraesCS1B01G388100 chr5B 239395310 239396320 1010 True 1544.000000 1544 94.274000 914 1922 1 chr5B.!!$R1 1008
14 TraesCS1B01G388100 chr5B 472745277 472746156 879 True 739.000000 739 82.270000 10 914 1 chr5B.!!$R2 904
15 TraesCS1B01G388100 chr2B 184124220 184125033 813 True 1182.000000 1182 92.998000 1049 1856 1 chr2B.!!$R1 807
16 TraesCS1B01G388100 chr6A 579955747 579956623 876 True 894.000000 894 85.083000 10 911 1 chr6A.!!$R1 901
17 TraesCS1B01G388100 chr6D 433768649 433769526 877 True 885.000000 885 84.895000 10 911 1 chr6D.!!$R1 901
18 TraesCS1B01G388100 chr2A 203825623 203826129 506 True 665.000000 665 90.551000 928 1428 1 chr2A.!!$R1 500
19 TraesCS1B01G388100 chr7B 637024839 637025461 622 False 453.000000 453 80.094000 1431 2059 1 chr7B.!!$F4 628

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
298 322 1.519719 CCCTCTCCTTCCTCTTGCG 59.480 63.158 0.0 0.0 0.0 4.85 F
1186 1308 1.614449 AGCTTCCCTCCCTCTCTCTA 58.386 55.000 0.0 0.0 0.0 2.43 F
2480 4192 0.744771 GGACTGAAAGGATGGACGGC 60.745 60.000 0.0 0.0 39.3 5.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1993 3688 2.502947 AGTGCATCTCCATAGTCTGCAA 59.497 45.455 0.00 0.0 41.07 4.08 R
2554 4266 1.899814 CACAGCACTGAGTACCCCTTA 59.100 52.381 4.31 0.0 0.00 2.69 R
4362 6457 1.267261 AGTCCGAGACACTGAAGAACG 59.733 52.381 6.78 0.0 34.60 3.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
82 83 4.838152 GCCGAATCCTCCGCTGCA 62.838 66.667 0.00 0.00 0.00 4.41
298 322 1.519719 CCCTCTCCTTCCTCTTGCG 59.480 63.158 0.00 0.00 0.00 4.85
348 374 6.263168 CCTGATTTTTGTATGGGATGAGTACC 59.737 42.308 0.00 0.00 0.00 3.34
354 380 2.180946 ATGGGATGAGTACCTGCTGA 57.819 50.000 0.00 0.00 0.00 4.26
364 390 4.125703 GAGTACCTGCTGAAGATTGGATG 58.874 47.826 0.00 0.00 0.00 3.51
440 482 4.460263 TCCAGTGCACATTCAAGTTTACT 58.540 39.130 21.04 0.00 0.00 2.24
441 483 4.887071 TCCAGTGCACATTCAAGTTTACTT 59.113 37.500 21.04 0.00 36.45 2.24
442 484 6.058833 TCCAGTGCACATTCAAGTTTACTTA 58.941 36.000 21.04 0.00 34.28 2.24
443 485 6.017440 TCCAGTGCACATTCAAGTTTACTTAC 60.017 38.462 21.04 0.00 34.28 2.34
455 497 8.149973 TCAAGTTTACTTACATGTGAAAGGAC 57.850 34.615 9.11 6.22 34.28 3.85
563 610 7.784633 AATGTTTTGGTTTGAACATGTTAGG 57.215 32.000 11.95 0.00 43.58 2.69
571 618 5.977129 GGTTTGAACATGTTAGGTGTGAAAG 59.023 40.000 11.95 0.00 0.00 2.62
582 630 7.227873 TGTTAGGTGTGAAAGTTCAATGGATA 58.772 34.615 0.00 0.00 39.21 2.59
589 637 7.903431 GTGTGAAAGTTCAATGGATAACGATAC 59.097 37.037 0.00 0.00 39.21 2.24
651 700 3.436704 TGACCTCAAATCAAAGCTTAGCG 59.563 43.478 0.00 0.00 0.00 4.26
679 728 3.357203 TGCAATTCGAGAGAGTAGGAGT 58.643 45.455 0.00 0.00 43.69 3.85
730 779 7.611213 AATTGGTCAACACATTAGTACTAGC 57.389 36.000 2.23 0.00 0.00 3.42
804 855 5.857471 AGTGGTACTGTTACACTGTGTTA 57.143 39.130 19.73 7.21 32.45 2.41
807 858 7.954835 AGTGGTACTGTTACACTGTGTTATTA 58.045 34.615 19.73 0.00 32.45 0.98
890 966 4.564782 AGCTGATTGATCTTCAGGTTCA 57.435 40.909 18.98 2.47 46.72 3.18
1186 1308 1.614449 AGCTTCCCTCCCTCTCTCTA 58.386 55.000 0.00 0.00 0.00 2.43
1532 2698 3.378112 CACAATTCTCCGGTACATTGCAT 59.622 43.478 16.96 2.53 30.96 3.96
1611 2781 4.008330 TGTTCTGGTTTTACGGTGTTTGA 58.992 39.130 0.00 0.00 0.00 2.69
1652 3324 3.194329 TCTCACTATGTCCTGAGTTGCTG 59.806 47.826 0.00 0.00 36.16 4.41
1770 3445 1.947456 ACTTGGCAACTCGAACCTTTC 59.053 47.619 0.00 0.00 37.61 2.62
1901 3596 5.818336 TCTCTATGTCTTGACTTAGAGGTCG 59.182 44.000 31.13 19.06 41.22 4.79
2265 3977 9.091220 AGAGATATAAAGGGCGTCTAATAGTTT 57.909 33.333 0.00 0.00 0.00 2.66
2480 4192 0.744771 GGACTGAAAGGATGGACGGC 60.745 60.000 0.00 0.00 39.30 5.68
3168 4896 7.099764 TCTGGACAATCAACAAGAAGATAGTC 58.900 38.462 0.00 0.00 0.00 2.59
3273 5001 2.277084 GTTCGAATCTTACCACGGCAT 58.723 47.619 0.00 0.00 0.00 4.40
3731 5568 9.363401 AGATACTTATGTGGCACAGTTACTATA 57.637 33.333 26.04 8.57 41.80 1.31
3738 5575 6.649155 TGTGGCACAGTTACTATATGTTCAT 58.351 36.000 17.96 0.00 41.80 2.57
3740 5577 6.202954 GTGGCACAGTTACTATATGTTCATCC 59.797 42.308 13.86 0.00 41.80 3.51
3744 5581 7.095060 GCACAGTTACTATATGTTCATCCATGG 60.095 40.741 4.97 4.97 0.00 3.66
3835 5672 2.288395 GGAAACTCAACATGGCAACCTG 60.288 50.000 0.00 0.00 38.31 4.00
3930 5990 5.065731 GTGATGATGTTTCCTTGGATGAGTC 59.934 44.000 0.00 0.00 0.00 3.36
3959 6028 4.798574 TCGATCATTATGTCCATGTCTCG 58.201 43.478 0.00 0.00 33.28 4.04
3964 6033 2.454336 TATGTCCATGTCTCGGTCCT 57.546 50.000 0.00 0.00 0.00 3.85
4145 6239 5.187186 AGTTATACAGCTCGAAAGGAAAGGA 59.813 40.000 0.00 0.00 0.00 3.36
4226 6320 0.534412 CAGATGGCCGTCAGAAGTCT 59.466 55.000 26.70 0.89 0.00 3.24
4298 6392 2.416296 GCGGTACCTTTTTGGGCATTAC 60.416 50.000 10.90 0.00 41.11 1.89
4310 6404 0.453390 GGCATTACTGTTGCAGCCTC 59.547 55.000 6.78 0.00 41.95 4.70
4318 6412 1.470098 CTGTTGCAGCCTCATTGGTAC 59.530 52.381 0.00 0.00 38.35 3.34
4362 6457 6.391227 TGAAACCTGGAACTTCAGATTTTC 57.609 37.500 0.00 0.00 31.08 2.29
4384 6479 2.554893 GTTCTTCAGTGTCTCGGACTCT 59.445 50.000 5.77 4.69 36.94 3.24
4399 6494 6.602009 TCTCGGACTCTGTTATTCAGTATCAA 59.398 38.462 0.00 0.00 43.97 2.57
4424 6522 8.721019 ATTATGTATTCCTTTTGCATGTTTGG 57.279 30.769 0.00 0.00 0.00 3.28
4449 6548 0.035056 ATGCCAACTGCTACCAGGAC 60.035 55.000 0.00 0.00 43.53 3.85
4510 6610 5.097742 TGATCAATTCCGTATCTGTGGTT 57.902 39.130 0.00 0.00 0.00 3.67
4521 6621 4.570369 CGTATCTGTGGTTAATGTCATGCA 59.430 41.667 0.00 0.00 0.00 3.96
4524 6624 3.695556 TCTGTGGTTAATGTCATGCATGG 59.304 43.478 25.97 8.24 37.96 3.66
4525 6625 2.759535 TGTGGTTAATGTCATGCATGGG 59.240 45.455 25.97 1.85 37.96 4.00
4562 6662 6.461110 TCCTGTTTAAATACTACTCCCTCG 57.539 41.667 0.00 0.00 0.00 4.63
4563 6663 5.361857 TCCTGTTTAAATACTACTCCCTCGG 59.638 44.000 0.00 0.00 0.00 4.63
4564 6664 5.128335 CCTGTTTAAATACTACTCCCTCGGT 59.872 44.000 0.00 0.00 0.00 4.69
4565 6665 6.212888 TGTTTAAATACTACTCCCTCGGTC 57.787 41.667 0.00 0.00 0.00 4.79
4566 6666 5.954150 TGTTTAAATACTACTCCCTCGGTCT 59.046 40.000 0.00 0.00 0.00 3.85
4567 6667 6.127535 TGTTTAAATACTACTCCCTCGGTCTG 60.128 42.308 0.00 0.00 0.00 3.51
4568 6668 2.660670 ATACTACTCCCTCGGTCTGG 57.339 55.000 0.00 0.00 0.00 3.86
4569 6669 1.588239 TACTACTCCCTCGGTCTGGA 58.412 55.000 0.00 0.00 0.00 3.86
4570 6670 0.702902 ACTACTCCCTCGGTCTGGAA 59.297 55.000 0.00 0.00 0.00 3.53
4571 6671 1.076677 ACTACTCCCTCGGTCTGGAAA 59.923 52.381 0.00 0.00 0.00 3.13
4572 6672 2.292323 ACTACTCCCTCGGTCTGGAAAT 60.292 50.000 0.00 0.00 0.00 2.17
4573 6673 2.544844 ACTCCCTCGGTCTGGAAATA 57.455 50.000 0.00 0.00 0.00 1.40
4574 6674 2.108970 ACTCCCTCGGTCTGGAAATAC 58.891 52.381 0.00 0.00 0.00 1.89
4575 6675 2.292323 ACTCCCTCGGTCTGGAAATACT 60.292 50.000 0.00 0.00 0.00 2.12
4576 6676 2.766828 CTCCCTCGGTCTGGAAATACTT 59.233 50.000 0.00 0.00 0.00 2.24
4577 6677 2.500098 TCCCTCGGTCTGGAAATACTTG 59.500 50.000 0.00 0.00 0.00 3.16
4578 6678 2.236395 CCCTCGGTCTGGAAATACTTGT 59.764 50.000 0.00 0.00 0.00 3.16
4579 6679 3.522553 CCTCGGTCTGGAAATACTTGTC 58.477 50.000 0.00 0.00 0.00 3.18
4580 6680 3.056107 CCTCGGTCTGGAAATACTTGTCA 60.056 47.826 0.00 0.00 0.00 3.58
4581 6681 4.383118 CCTCGGTCTGGAAATACTTGTCAT 60.383 45.833 0.00 0.00 0.00 3.06
4582 6682 4.755411 TCGGTCTGGAAATACTTGTCATC 58.245 43.478 0.00 0.00 0.00 2.92
4583 6683 4.221924 TCGGTCTGGAAATACTTGTCATCA 59.778 41.667 0.00 0.00 0.00 3.07
4584 6684 4.935205 CGGTCTGGAAATACTTGTCATCAA 59.065 41.667 0.00 0.00 0.00 2.57
4585 6685 5.411361 CGGTCTGGAAATACTTGTCATCAAA 59.589 40.000 0.00 0.00 32.87 2.69
4586 6686 6.072728 CGGTCTGGAAATACTTGTCATCAAAA 60.073 38.462 0.00 0.00 32.87 2.44
4587 6687 7.362056 CGGTCTGGAAATACTTGTCATCAAAAT 60.362 37.037 0.00 0.00 32.87 1.82
4588 6688 8.956426 GGTCTGGAAATACTTGTCATCAAAATA 58.044 33.333 0.00 0.00 32.87 1.40
4589 6689 9.994432 GTCTGGAAATACTTGTCATCAAAATAG 57.006 33.333 0.00 0.00 32.87 1.73
4590 6690 9.958180 TCTGGAAATACTTGTCATCAAAATAGA 57.042 29.630 0.00 0.00 32.87 1.98
4645 6745 9.499479 ACATCTAGATACATCCATTTCAATGAC 57.501 33.333 4.54 0.00 38.70 3.06
4646 6746 9.498176 CATCTAGATACATCCATTTCAATGACA 57.502 33.333 4.54 0.00 38.70 3.58
4648 6748 9.551734 TCTAGATACATCCATTTCAATGACAAG 57.448 33.333 0.81 0.00 38.70 3.16
4649 6749 9.334947 CTAGATACATCCATTTCAATGACAAGT 57.665 33.333 0.81 0.00 38.70 3.16
4651 6751 9.857656 AGATACATCCATTTCAATGACAAGTAT 57.142 29.630 0.81 4.50 38.70 2.12
4655 6755 8.253113 ACATCCATTTCAATGACAAGTATTTCC 58.747 33.333 0.81 0.00 38.70 3.13
4656 6756 6.851609 TCCATTTCAATGACAAGTATTTCCG 58.148 36.000 0.81 0.00 38.70 4.30
4657 6757 6.035843 CCATTTCAATGACAAGTATTTCCGG 58.964 40.000 0.00 0.00 38.70 5.14
4658 6758 6.127758 CCATTTCAATGACAAGTATTTCCGGA 60.128 38.462 0.00 0.00 38.70 5.14
4659 6759 5.873179 TTCAATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 0.00 4.79
4660 6760 3.930229 TCAATGACAAGTATTTCCGGACG 59.070 43.478 1.83 0.00 0.00 4.79
4661 6761 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
4662 6762 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
4663 6763 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
4664 6764 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
4665 6765 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
4666 6766 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
4667 6767 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
4668 6768 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
4669 6769 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
4670 6770 0.967380 TTTCCGGACGGAGGGAGTAC 60.967 60.000 13.64 0.00 46.06 2.73
4677 6777 3.056607 CGGACGGAGGGAGTACTTTTTAA 60.057 47.826 0.00 0.00 0.00 1.52
4701 6801 6.431198 TTTATCTGTATTGCGGTCCTTTTC 57.569 37.500 0.00 0.00 0.00 2.29
4704 6804 0.730840 GTATTGCGGTCCTTTTCGGG 59.269 55.000 0.00 0.00 0.00 5.14
4747 6847 1.455217 ATGTACTCCCTCCGTCCGG 60.455 63.158 0.00 0.00 0.00 5.14
4753 6853 1.339097 CTCCCTCCGTCCGGAAATAT 58.661 55.000 5.23 0.00 44.66 1.28
4754 6854 1.692519 CTCCCTCCGTCCGGAAATATT 59.307 52.381 5.23 0.00 44.66 1.28
4755 6855 1.690352 TCCCTCCGTCCGGAAATATTC 59.310 52.381 5.23 0.00 44.66 1.75
4759 6859 1.126079 CCGTCCGGAAATATTCGTCG 58.874 55.000 5.23 1.25 37.50 5.12
4760 6860 1.126079 CGTCCGGAAATATTCGTCGG 58.874 55.000 5.23 14.22 41.80 4.79
4761 6861 1.268692 CGTCCGGAAATATTCGTCGGA 60.269 52.381 5.23 17.28 46.06 4.55
4762 6862 2.787601 TCCGGAAATATTCGTCGGAG 57.212 50.000 17.28 1.97 43.84 4.63
4766 6866 4.056050 CCGGAAATATTCGTCGGAGAAAT 58.944 43.478 14.89 0.00 42.94 2.17
4768 6868 4.743151 CGGAAATATTCGTCGGAGAAATGA 59.257 41.667 0.00 0.00 39.69 2.57
4774 6884 8.833231 AATATTCGTCGGAGAAATGAATGTAT 57.167 30.769 0.00 0.00 39.69 2.29
4780 6890 6.579292 CGTCGGAGAAATGAATGTATCTAGAC 59.421 42.308 0.00 0.00 39.69 2.59
4781 6891 7.426410 GTCGGAGAAATGAATGTATCTAGACA 58.574 38.462 0.00 0.00 39.69 3.41
4784 6894 9.914131 CGGAGAAATGAATGTATCTAGACATAA 57.086 33.333 0.00 0.00 39.16 1.90
4820 6931 8.796475 AGATACATTTATTTTCATCCATTCCCG 58.204 33.333 0.00 0.00 0.00 5.14
4821 6932 5.600696 ACATTTATTTTCATCCATTCCCGC 58.399 37.500 0.00 0.00 0.00 6.13
4827 6938 0.035915 TCATCCATTCCCGCGACAAA 60.036 50.000 8.23 0.00 0.00 2.83
4830 6941 2.404923 TCCATTCCCGCGACAAATAA 57.595 45.000 8.23 0.00 0.00 1.40
4833 6944 3.314080 TCCATTCCCGCGACAAATAATTC 59.686 43.478 8.23 0.00 0.00 2.17
4834 6945 3.550030 CCATTCCCGCGACAAATAATTCC 60.550 47.826 8.23 0.00 0.00 3.01
4839 6950 1.331680 CGCGACAAATAATTCCGGACG 60.332 52.381 1.83 1.53 0.00 4.79
4847 6958 0.032813 TAATTCCGGACGGAGGGAGT 60.033 55.000 13.64 1.45 46.06 3.85
4848 6959 0.032813 AATTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
4849 6960 0.754587 ATTCCGGACGGAGGGAGTAC 60.755 60.000 13.64 0.00 46.06 2.73
4858 6969 4.004982 GACGGAGGGAGTACTATCAGATC 58.995 52.174 0.00 0.00 0.00 2.75
4865 6976 5.364157 AGGGAGTACTATCAGATCAAACACC 59.636 44.000 0.00 0.00 0.00 4.16
4868 6979 2.906354 ACTATCAGATCAAACACCGGC 58.094 47.619 0.00 0.00 0.00 6.13
4883 6994 0.957395 CCGGCTGATCTGCTGTGTTT 60.957 55.000 26.10 0.00 37.61 2.83
4884 6995 0.877071 CGGCTGATCTGCTGTGTTTT 59.123 50.000 21.77 0.00 34.82 2.43
4885 6996 1.267806 CGGCTGATCTGCTGTGTTTTT 59.732 47.619 21.77 0.00 34.82 1.94
4886 6997 2.669364 GGCTGATCTGCTGTGTTTTTG 58.331 47.619 21.99 0.00 0.00 2.44
4887 6998 2.056577 GCTGATCTGCTGTGTTTTTGC 58.943 47.619 16.60 0.00 0.00 3.68
4888 6999 2.544277 GCTGATCTGCTGTGTTTTTGCA 60.544 45.455 16.60 0.00 35.30 4.08
4897 7008 4.959631 CTGTGTTTTTGCAGCATAACAG 57.040 40.909 18.88 13.47 31.75 3.16
4898 7009 4.362279 CTGTGTTTTTGCAGCATAACAGT 58.638 39.130 18.88 0.00 31.75 3.55
4899 7010 4.111198 TGTGTTTTTGCAGCATAACAGTG 58.889 39.130 18.88 0.00 31.75 3.66
4900 7011 3.490526 GTGTTTTTGCAGCATAACAGTGG 59.509 43.478 18.88 0.00 31.75 4.00
4901 7012 3.059166 GTTTTTGCAGCATAACAGTGGG 58.941 45.455 13.40 0.00 0.00 4.61
4902 7013 1.993956 TTTGCAGCATAACAGTGGGT 58.006 45.000 0.00 0.00 0.00 4.51
4903 7014 1.993956 TTGCAGCATAACAGTGGGTT 58.006 45.000 0.00 0.00 43.62 4.11
4904 7015 1.993956 TGCAGCATAACAGTGGGTTT 58.006 45.000 0.00 0.00 40.96 3.27
4905 7016 3.147553 TGCAGCATAACAGTGGGTTTA 57.852 42.857 0.00 0.00 40.96 2.01
4906 7017 3.081061 TGCAGCATAACAGTGGGTTTAG 58.919 45.455 0.00 0.00 40.96 1.85
4907 7018 3.081804 GCAGCATAACAGTGGGTTTAGT 58.918 45.455 0.00 0.00 40.96 2.24
4908 7019 4.258543 GCAGCATAACAGTGGGTTTAGTA 58.741 43.478 0.00 0.00 40.96 1.82
4909 7020 4.698304 GCAGCATAACAGTGGGTTTAGTAA 59.302 41.667 0.00 0.00 40.96 2.24
4910 7021 5.182380 GCAGCATAACAGTGGGTTTAGTAAA 59.818 40.000 0.00 0.00 40.96 2.01
4911 7022 6.127730 GCAGCATAACAGTGGGTTTAGTAAAT 60.128 38.462 0.00 0.00 40.96 1.40
4912 7023 7.576856 GCAGCATAACAGTGGGTTTAGTAAATT 60.577 37.037 0.00 0.00 40.96 1.82
4913 7024 8.303876 CAGCATAACAGTGGGTTTAGTAAATTT 58.696 33.333 0.00 0.00 40.96 1.82
4914 7025 8.303876 AGCATAACAGTGGGTTTAGTAAATTTG 58.696 33.333 0.00 0.00 40.96 2.32
4915 7026 7.544217 GCATAACAGTGGGTTTAGTAAATTTGG 59.456 37.037 0.00 0.00 40.96 3.28
4916 7027 8.581578 CATAACAGTGGGTTTAGTAAATTTGGT 58.418 33.333 0.00 0.00 40.96 3.67
4917 7028 6.644248 ACAGTGGGTTTAGTAAATTTGGTC 57.356 37.500 0.00 0.00 0.00 4.02
4918 7029 6.370453 ACAGTGGGTTTAGTAAATTTGGTCT 58.630 36.000 0.00 0.00 0.00 3.85
4919 7030 6.489022 ACAGTGGGTTTAGTAAATTTGGTCTC 59.511 38.462 0.00 0.00 0.00 3.36
4920 7031 6.715264 CAGTGGGTTTAGTAAATTTGGTCTCT 59.285 38.462 0.00 0.00 0.00 3.10
4921 7032 6.940867 AGTGGGTTTAGTAAATTTGGTCTCTC 59.059 38.462 0.00 0.00 0.00 3.20
4922 7033 6.940867 GTGGGTTTAGTAAATTTGGTCTCTCT 59.059 38.462 0.00 0.00 0.00 3.10
4923 7034 8.098912 GTGGGTTTAGTAAATTTGGTCTCTCTA 58.901 37.037 0.00 0.00 0.00 2.43
4924 7035 8.319146 TGGGTTTAGTAAATTTGGTCTCTCTAG 58.681 37.037 0.00 0.00 0.00 2.43
4925 7036 8.537858 GGGTTTAGTAAATTTGGTCTCTCTAGA 58.462 37.037 0.00 0.00 0.00 2.43
4926 7037 9.589111 GGTTTAGTAAATTTGGTCTCTCTAGAG 57.411 37.037 13.98 13.98 43.36 2.43
4929 7040 7.176589 AGTAAATTTGGTCTCTCTAGAGTGG 57.823 40.000 19.21 13.10 42.60 4.00
4930 7041 6.954684 AGTAAATTTGGTCTCTCTAGAGTGGA 59.045 38.462 19.21 15.01 42.60 4.02
4931 7042 5.930837 AATTTGGTCTCTCTAGAGTGGAG 57.069 43.478 19.21 10.08 42.60 3.86
4932 7043 4.390129 TTTGGTCTCTCTAGAGTGGAGT 57.610 45.455 19.21 0.00 42.60 3.85
4933 7044 5.516059 TTTGGTCTCTCTAGAGTGGAGTA 57.484 43.478 19.21 8.09 42.60 2.59
4934 7045 5.718801 TTGGTCTCTCTAGAGTGGAGTAT 57.281 43.478 19.21 0.00 42.60 2.12
4935 7046 6.826632 TTGGTCTCTCTAGAGTGGAGTATA 57.173 41.667 19.21 0.00 42.60 1.47
4936 7047 7.395525 TTGGTCTCTCTAGAGTGGAGTATAT 57.604 40.000 19.21 0.00 42.60 0.86
4937 7048 7.395525 TGGTCTCTCTAGAGTGGAGTATATT 57.604 40.000 19.21 0.00 42.60 1.28
4938 7049 7.817440 TGGTCTCTCTAGAGTGGAGTATATTT 58.183 38.462 19.21 0.00 42.60 1.40
4939 7050 8.282982 TGGTCTCTCTAGAGTGGAGTATATTTT 58.717 37.037 19.21 0.00 42.60 1.82
4940 7051 8.573035 GGTCTCTCTAGAGTGGAGTATATTTTG 58.427 40.741 19.21 0.00 42.60 2.44
4941 7052 9.127277 GTCTCTCTAGAGTGGAGTATATTTTGT 57.873 37.037 19.21 0.00 42.60 2.83
4942 7053 9.344772 TCTCTCTAGAGTGGAGTATATTTTGTC 57.655 37.037 19.21 0.00 42.60 3.18
4943 7054 8.466617 TCTCTAGAGTGGAGTATATTTTGTCC 57.533 38.462 19.21 0.00 33.06 4.02
4944 7055 8.059461 TCTCTAGAGTGGAGTATATTTTGTCCA 58.941 37.037 19.21 0.00 36.72 4.02
4945 7056 8.603898 TCTAGAGTGGAGTATATTTTGTCCAA 57.396 34.615 0.00 0.00 40.79 3.53
4946 7057 8.696374 TCTAGAGTGGAGTATATTTTGTCCAAG 58.304 37.037 0.00 0.00 40.79 3.61
4947 7058 6.653989 AGAGTGGAGTATATTTTGTCCAAGG 58.346 40.000 0.00 0.00 40.79 3.61
4948 7059 6.443849 AGAGTGGAGTATATTTTGTCCAAGGA 59.556 38.462 0.00 0.00 40.79 3.36
4949 7060 6.415573 AGTGGAGTATATTTTGTCCAAGGAC 58.584 40.000 12.30 12.30 40.79 3.85
4950 7061 5.589050 GTGGAGTATATTTTGTCCAAGGACC 59.411 44.000 16.18 0.00 43.97 4.46
4951 7062 5.491078 TGGAGTATATTTTGTCCAAGGACCT 59.509 40.000 16.18 3.72 43.97 3.85
4952 7063 5.823045 GGAGTATATTTTGTCCAAGGACCTG 59.177 44.000 16.18 0.00 43.97 4.00
4953 7064 6.388619 AGTATATTTTGTCCAAGGACCTGT 57.611 37.500 16.18 3.34 43.97 4.00
4954 7065 6.790319 AGTATATTTTGTCCAAGGACCTGTT 58.210 36.000 16.18 2.58 43.97 3.16
4955 7066 7.238710 AGTATATTTTGTCCAAGGACCTGTTT 58.761 34.615 16.18 1.29 43.97 2.83
4956 7067 4.937201 ATTTTGTCCAAGGACCTGTTTC 57.063 40.909 16.18 0.00 43.97 2.78
4957 7068 1.961793 TTGTCCAAGGACCTGTTTCG 58.038 50.000 16.18 0.00 43.97 3.46
4958 7069 0.534203 TGTCCAAGGACCTGTTTCGC 60.534 55.000 16.18 0.00 43.97 4.70
4959 7070 1.072505 TCCAAGGACCTGTTTCGCC 59.927 57.895 0.00 0.00 0.00 5.54
4960 7071 2.325082 CCAAGGACCTGTTTCGCCG 61.325 63.158 0.00 0.00 0.00 6.46
4961 7072 1.597027 CAAGGACCTGTTTCGCCGT 60.597 57.895 0.00 0.00 0.00 5.68
4962 7073 1.597027 AAGGACCTGTTTCGCCGTG 60.597 57.895 0.00 0.00 0.00 4.94
4963 7074 2.029964 GGACCTGTTTCGCCGTGA 59.970 61.111 0.00 0.00 0.00 4.35
4964 7075 1.595929 GGACCTGTTTCGCCGTGAA 60.596 57.895 0.00 0.00 33.85 3.18
4965 7076 1.566018 GGACCTGTTTCGCCGTGAAG 61.566 60.000 0.00 0.00 37.99 3.02
4966 7077 1.566018 GACCTGTTTCGCCGTGAAGG 61.566 60.000 0.00 0.00 44.97 3.46
4967 7078 2.325082 CCTGTTTCGCCGTGAAGGG 61.325 63.158 0.00 0.00 41.48 3.95
4968 7079 1.597027 CTGTTTCGCCGTGAAGGGT 60.597 57.895 0.00 0.00 41.48 4.34
4969 7080 1.841663 CTGTTTCGCCGTGAAGGGTG 61.842 60.000 0.00 0.00 41.48 4.61
4970 7081 1.595929 GTTTCGCCGTGAAGGGTGA 60.596 57.895 1.27 1.27 44.51 4.02
4971 7082 1.595929 TTTCGCCGTGAAGGGTGAC 60.596 57.895 4.84 0.00 45.77 3.67
4972 7083 2.035237 TTTCGCCGTGAAGGGTGACT 62.035 55.000 4.84 0.00 45.77 3.41
4973 7084 2.430382 TTCGCCGTGAAGGGTGACTC 62.430 60.000 4.84 0.00 45.77 3.36
4974 7085 2.932234 CGCCGTGAAGGGTGACTCT 61.932 63.158 0.00 0.00 40.04 3.24
4975 7086 1.374758 GCCGTGAAGGGTGACTCTG 60.375 63.158 0.00 0.00 41.48 3.35
4976 7087 1.816863 GCCGTGAAGGGTGACTCTGA 61.817 60.000 0.00 0.00 41.48 3.27
4977 7088 0.898320 CCGTGAAGGGTGACTCTGAT 59.102 55.000 0.00 0.00 35.97 2.90
4978 7089 1.276421 CCGTGAAGGGTGACTCTGATT 59.724 52.381 0.00 0.00 35.97 2.57
4979 7090 2.289694 CCGTGAAGGGTGACTCTGATTT 60.290 50.000 0.00 0.00 35.97 2.17
4980 7091 2.738846 CGTGAAGGGTGACTCTGATTTG 59.261 50.000 0.00 0.00 0.00 2.32
4981 7092 3.077359 GTGAAGGGTGACTCTGATTTGG 58.923 50.000 0.00 0.00 0.00 3.28
4982 7093 2.087646 GAAGGGTGACTCTGATTTGGC 58.912 52.381 0.00 0.00 0.00 4.52
4983 7094 0.329596 AGGGTGACTCTGATTTGGCC 59.670 55.000 0.00 0.00 0.00 5.36
4984 7095 1.026718 GGGTGACTCTGATTTGGCCG 61.027 60.000 0.00 0.00 0.00 6.13
4985 7096 0.036388 GGTGACTCTGATTTGGCCGA 60.036 55.000 0.00 0.00 0.00 5.54
4986 7097 1.407437 GGTGACTCTGATTTGGCCGAT 60.407 52.381 0.00 0.00 0.00 4.18
4987 7098 2.359900 GTGACTCTGATTTGGCCGATT 58.640 47.619 0.00 0.00 0.00 3.34
4988 7099 2.749621 GTGACTCTGATTTGGCCGATTT 59.250 45.455 0.00 0.00 0.00 2.17
4989 7100 3.191371 GTGACTCTGATTTGGCCGATTTT 59.809 43.478 0.00 0.00 0.00 1.82
4990 7101 3.826157 TGACTCTGATTTGGCCGATTTTT 59.174 39.130 0.00 0.00 0.00 1.94
4991 7102 5.007034 TGACTCTGATTTGGCCGATTTTTA 58.993 37.500 0.00 0.00 0.00 1.52
4992 7103 5.123820 TGACTCTGATTTGGCCGATTTTTAG 59.876 40.000 0.00 0.00 0.00 1.85
4993 7104 5.253330 ACTCTGATTTGGCCGATTTTTAGA 58.747 37.500 0.00 0.00 0.00 2.10
4994 7105 5.355350 ACTCTGATTTGGCCGATTTTTAGAG 59.645 40.000 13.91 13.91 35.35 2.43
4995 7106 4.640201 TCTGATTTGGCCGATTTTTAGAGG 59.360 41.667 0.00 0.00 0.00 3.69
4996 7107 4.594970 TGATTTGGCCGATTTTTAGAGGA 58.405 39.130 0.00 0.00 0.00 3.71
4997 7108 4.398044 TGATTTGGCCGATTTTTAGAGGAC 59.602 41.667 0.00 0.00 0.00 3.85
4998 7109 3.426787 TTGGCCGATTTTTAGAGGACA 57.573 42.857 0.00 0.00 40.58 4.02
4999 7110 2.706890 TGGCCGATTTTTAGAGGACAC 58.293 47.619 0.00 0.00 36.75 3.67
5000 7111 1.664151 GGCCGATTTTTAGAGGACACG 59.336 52.381 0.00 0.00 0.00 4.49
5001 7112 1.062148 GCCGATTTTTAGAGGACACGC 59.938 52.381 0.00 0.00 0.00 5.34
5002 7113 1.664151 CCGATTTTTAGAGGACACGCC 59.336 52.381 0.00 0.00 0.00 5.68
5003 7114 2.343101 CGATTTTTAGAGGACACGCCA 58.657 47.619 0.00 0.00 40.02 5.69
5004 7115 2.936498 CGATTTTTAGAGGACACGCCAT 59.064 45.455 0.00 0.00 40.02 4.40
5005 7116 3.242413 CGATTTTTAGAGGACACGCCATG 60.242 47.826 0.00 0.00 40.02 3.66
5015 7126 3.566273 CACGCCATGTGCAAGAAAA 57.434 47.368 0.00 0.00 42.70 2.29
5016 7127 2.068837 CACGCCATGTGCAAGAAAAT 57.931 45.000 0.00 0.00 42.70 1.82
5017 7128 2.406130 CACGCCATGTGCAAGAAAATT 58.594 42.857 0.00 0.00 42.70 1.82
5018 7129 2.156117 CACGCCATGTGCAAGAAAATTG 59.844 45.455 0.00 0.00 42.70 2.32
5019 7130 1.727880 CGCCATGTGCAAGAAAATTGG 59.272 47.619 0.00 0.00 41.33 3.16
5020 7131 2.769893 GCCATGTGCAAGAAAATTGGT 58.230 42.857 0.00 0.00 40.77 3.67
5021 7132 2.481185 GCCATGTGCAAGAAAATTGGTG 59.519 45.455 0.00 0.00 40.77 4.17
5022 7133 3.803021 GCCATGTGCAAGAAAATTGGTGA 60.803 43.478 0.00 0.00 40.77 4.02
5023 7134 3.742369 CCATGTGCAAGAAAATTGGTGAC 59.258 43.478 0.00 0.00 0.00 3.67
5024 7135 4.370049 CATGTGCAAGAAAATTGGTGACA 58.630 39.130 0.00 0.00 39.83 3.58
5038 7149 3.741805 GGTGACAACCTTCGCTAATTC 57.258 47.619 0.00 0.00 43.84 2.17
5039 7150 3.071479 GGTGACAACCTTCGCTAATTCA 58.929 45.455 0.00 0.00 43.84 2.57
5040 7151 3.500680 GGTGACAACCTTCGCTAATTCAA 59.499 43.478 0.00 0.00 43.84 2.69
5041 7152 4.378459 GGTGACAACCTTCGCTAATTCAAG 60.378 45.833 0.00 0.00 43.84 3.02
5042 7153 4.451096 GTGACAACCTTCGCTAATTCAAGA 59.549 41.667 0.00 0.00 0.00 3.02
5043 7154 5.122396 GTGACAACCTTCGCTAATTCAAGAT 59.878 40.000 0.00 0.00 0.00 2.40
5044 7155 5.705441 TGACAACCTTCGCTAATTCAAGATT 59.295 36.000 0.00 0.00 0.00 2.40
5045 7156 6.128282 TGACAACCTTCGCTAATTCAAGATTC 60.128 38.462 0.00 0.00 0.00 2.52
5046 7157 5.123979 ACAACCTTCGCTAATTCAAGATTCC 59.876 40.000 0.00 0.00 0.00 3.01
5047 7158 3.871594 ACCTTCGCTAATTCAAGATTCCG 59.128 43.478 0.00 0.00 0.00 4.30
5048 7159 3.303395 CCTTCGCTAATTCAAGATTCCGC 60.303 47.826 0.00 0.00 0.00 5.54
5049 7160 2.210116 TCGCTAATTCAAGATTCCGCC 58.790 47.619 0.00 0.00 0.00 6.13
5050 7161 1.939934 CGCTAATTCAAGATTCCGCCA 59.060 47.619 0.00 0.00 0.00 5.69
5051 7162 2.286418 CGCTAATTCAAGATTCCGCCAC 60.286 50.000 0.00 0.00 0.00 5.01
5052 7163 2.286418 GCTAATTCAAGATTCCGCCACG 60.286 50.000 0.00 0.00 0.00 4.94
5062 7173 3.548280 CCGCCACGGCAAATTTTG 58.452 55.556 9.11 4.72 41.17 2.44
5063 7174 2.026520 CCGCCACGGCAAATTTTGG 61.027 57.895 9.11 2.73 41.17 3.28
5073 7184 3.745332 GCAAATTTTGGCATAACAGGC 57.255 42.857 10.96 0.00 0.00 4.85
5074 7185 3.072944 GCAAATTTTGGCATAACAGGCA 58.927 40.909 10.96 0.00 42.83 4.75
5075 7186 3.690628 GCAAATTTTGGCATAACAGGCAT 59.309 39.130 10.96 0.00 44.02 4.40
5076 7187 4.201841 GCAAATTTTGGCATAACAGGCATC 60.202 41.667 10.96 0.00 44.02 3.91
5077 7188 4.822685 AATTTTGGCATAACAGGCATCA 57.177 36.364 0.00 0.00 44.02 3.07
5078 7189 4.822685 ATTTTGGCATAACAGGCATCAA 57.177 36.364 0.00 0.00 44.02 2.57
5079 7190 4.613925 TTTTGGCATAACAGGCATCAAA 57.386 36.364 0.00 0.00 44.02 2.69
5080 7191 3.591196 TTGGCATAACAGGCATCAAAC 57.409 42.857 0.00 0.00 44.02 2.93
5081 7192 1.824230 TGGCATAACAGGCATCAAACC 59.176 47.619 0.00 0.00 39.34 3.27
5082 7193 1.824230 GGCATAACAGGCATCAAACCA 59.176 47.619 0.00 0.00 0.00 3.67
5083 7194 2.233431 GGCATAACAGGCATCAAACCAA 59.767 45.455 0.00 0.00 0.00 3.67
5084 7195 3.306641 GGCATAACAGGCATCAAACCAAA 60.307 43.478 0.00 0.00 0.00 3.28
5085 7196 3.679502 GCATAACAGGCATCAAACCAAAC 59.320 43.478 0.00 0.00 0.00 2.93
5086 7197 2.507339 AACAGGCATCAAACCAAACG 57.493 45.000 0.00 0.00 0.00 3.60
5087 7198 1.686355 ACAGGCATCAAACCAAACGA 58.314 45.000 0.00 0.00 0.00 3.85
5088 7199 1.608590 ACAGGCATCAAACCAAACGAG 59.391 47.619 0.00 0.00 0.00 4.18
5089 7200 0.598065 AGGCATCAAACCAAACGAGC 59.402 50.000 0.00 0.00 0.00 5.03
5090 7201 0.313672 GGCATCAAACCAAACGAGCA 59.686 50.000 0.00 0.00 0.00 4.26
5091 7202 1.067635 GGCATCAAACCAAACGAGCAT 60.068 47.619 0.00 0.00 0.00 3.79
5092 7203 2.163412 GGCATCAAACCAAACGAGCATA 59.837 45.455 0.00 0.00 0.00 3.14
5093 7204 3.429085 GCATCAAACCAAACGAGCATAG 58.571 45.455 0.00 0.00 0.00 2.23
5094 7205 3.119849 GCATCAAACCAAACGAGCATAGT 60.120 43.478 0.00 0.00 0.00 2.12
5095 7206 4.615912 GCATCAAACCAAACGAGCATAGTT 60.616 41.667 0.00 0.00 34.62 2.24
5096 7207 4.742438 TCAAACCAAACGAGCATAGTTC 57.258 40.909 0.00 0.00 30.85 3.01
5097 7208 4.130857 TCAAACCAAACGAGCATAGTTCA 58.869 39.130 0.00 0.00 30.85 3.18
5098 7209 4.759693 TCAAACCAAACGAGCATAGTTCAT 59.240 37.500 0.00 0.00 30.85 2.57
5099 7210 4.685169 AACCAAACGAGCATAGTTCATG 57.315 40.909 0.00 0.00 30.85 3.07
5100 7211 3.937814 ACCAAACGAGCATAGTTCATGA 58.062 40.909 0.00 0.00 36.69 3.07
5101 7212 4.517285 ACCAAACGAGCATAGTTCATGAT 58.483 39.130 0.00 0.00 36.69 2.45
5102 7213 4.333649 ACCAAACGAGCATAGTTCATGATG 59.666 41.667 0.00 0.00 36.69 3.07
5103 7214 4.260907 CCAAACGAGCATAGTTCATGATGG 60.261 45.833 0.00 0.00 36.69 3.51
5104 7215 4.406648 AACGAGCATAGTTCATGATGGA 57.593 40.909 0.00 0.00 36.69 3.41
5105 7216 4.613925 ACGAGCATAGTTCATGATGGAT 57.386 40.909 0.00 0.00 36.69 3.41
5106 7217 4.564041 ACGAGCATAGTTCATGATGGATC 58.436 43.478 0.00 0.00 36.69 3.36
5107 7218 4.039609 ACGAGCATAGTTCATGATGGATCA 59.960 41.667 0.00 0.00 41.70 2.92
5108 7219 4.388165 CGAGCATAGTTCATGATGGATCAC 59.612 45.833 0.00 0.00 40.03 3.06
5109 7220 4.649692 AGCATAGTTCATGATGGATCACC 58.350 43.478 0.00 0.00 40.03 4.02
5110 7221 3.434641 GCATAGTTCATGATGGATCACCG 59.565 47.826 0.00 0.00 40.03 4.94
5111 7222 4.800582 GCATAGTTCATGATGGATCACCGA 60.801 45.833 0.00 0.00 40.03 4.69
5112 7223 5.485620 CATAGTTCATGATGGATCACCGAT 58.514 41.667 0.00 0.00 40.03 4.18
5113 7224 6.633856 CATAGTTCATGATGGATCACCGATA 58.366 40.000 0.00 0.00 40.03 2.92
5114 7225 4.887748 AGTTCATGATGGATCACCGATAC 58.112 43.478 0.00 0.00 40.03 2.24
5115 7226 4.344968 AGTTCATGATGGATCACCGATACA 59.655 41.667 0.00 0.00 40.03 2.29
5116 7227 4.953940 TCATGATGGATCACCGATACAA 57.046 40.909 0.00 0.00 36.39 2.41
5117 7228 4.886579 TCATGATGGATCACCGATACAAG 58.113 43.478 0.00 0.00 36.39 3.16
5118 7229 3.111853 TGATGGATCACCGATACAAGC 57.888 47.619 0.00 0.00 36.39 4.01
5119 7230 2.433970 TGATGGATCACCGATACAAGCA 59.566 45.455 0.00 0.00 36.39 3.91
5120 7231 2.602257 TGGATCACCGATACAAGCAG 57.398 50.000 0.00 0.00 39.42 4.24
5121 7232 2.107366 TGGATCACCGATACAAGCAGA 58.893 47.619 0.00 0.00 39.42 4.26
5122 7233 2.101415 TGGATCACCGATACAAGCAGAG 59.899 50.000 0.00 0.00 39.42 3.35
5123 7234 2.362397 GGATCACCGATACAAGCAGAGA 59.638 50.000 0.00 0.00 0.00 3.10
5124 7235 2.941453 TCACCGATACAAGCAGAGAC 57.059 50.000 0.00 0.00 0.00 3.36
5125 7236 2.447443 TCACCGATACAAGCAGAGACT 58.553 47.619 0.00 0.00 0.00 3.24
5126 7237 2.164422 TCACCGATACAAGCAGAGACTG 59.836 50.000 0.00 0.00 34.12 3.51
5127 7238 2.164422 CACCGATACAAGCAGAGACTGA 59.836 50.000 2.81 0.00 32.44 3.41
5128 7239 2.826128 ACCGATACAAGCAGAGACTGAA 59.174 45.455 2.81 0.00 32.44 3.02
5129 7240 3.449018 ACCGATACAAGCAGAGACTGAAT 59.551 43.478 2.81 0.00 32.44 2.57
5130 7241 4.081420 ACCGATACAAGCAGAGACTGAATT 60.081 41.667 2.81 0.00 32.44 2.17
5131 7242 4.505922 CCGATACAAGCAGAGACTGAATTC 59.494 45.833 0.00 0.00 32.44 2.17
5132 7243 5.105063 CGATACAAGCAGAGACTGAATTCA 58.895 41.667 8.12 8.12 32.44 2.57
5133 7244 5.578336 CGATACAAGCAGAGACTGAATTCAA 59.422 40.000 9.88 0.00 32.44 2.69
5134 7245 6.237781 CGATACAAGCAGAGACTGAATTCAAG 60.238 42.308 9.88 6.49 32.44 3.02
5135 7246 4.712476 ACAAGCAGAGACTGAATTCAAGT 58.288 39.130 9.88 9.61 32.44 3.16
5136 7247 5.858381 ACAAGCAGAGACTGAATTCAAGTA 58.142 37.500 9.88 0.00 32.44 2.24
5137 7248 6.291377 ACAAGCAGAGACTGAATTCAAGTAA 58.709 36.000 9.88 0.00 32.44 2.24
5138 7249 6.767902 ACAAGCAGAGACTGAATTCAAGTAAA 59.232 34.615 9.88 0.00 32.44 2.01
5139 7250 7.283127 ACAAGCAGAGACTGAATTCAAGTAAAA 59.717 33.333 9.88 0.00 32.44 1.52
5140 7251 7.992754 AGCAGAGACTGAATTCAAGTAAAAT 57.007 32.000 9.88 0.00 32.44 1.82
5141 7252 9.507329 AAGCAGAGACTGAATTCAAGTAAAATA 57.493 29.630 9.88 0.00 32.44 1.40
5142 7253 9.507329 AGCAGAGACTGAATTCAAGTAAAATAA 57.493 29.630 9.88 0.00 32.44 1.40
5143 7254 9.766277 GCAGAGACTGAATTCAAGTAAAATAAG 57.234 33.333 9.88 0.00 32.44 1.73
5155 7266 9.996554 TTCAAGTAAAATAAGATCACAGACTCA 57.003 29.630 0.00 0.00 0.00 3.41
5172 7283 3.010624 CTCATCTGAGTAGCACCATCG 57.989 52.381 0.00 0.00 37.40 3.84
5173 7284 2.360483 CTCATCTGAGTAGCACCATCGT 59.640 50.000 0.00 0.00 37.40 3.73
5174 7285 2.359214 TCATCTGAGTAGCACCATCGTC 59.641 50.000 0.00 0.00 0.00 4.20
5175 7286 1.834188 TCTGAGTAGCACCATCGTCA 58.166 50.000 0.00 0.00 0.00 4.35
5176 7287 2.167662 TCTGAGTAGCACCATCGTCAA 58.832 47.619 0.00 0.00 0.00 3.18
5177 7288 2.094700 TCTGAGTAGCACCATCGTCAAC 60.095 50.000 0.00 0.00 0.00 3.18
5178 7289 1.067142 TGAGTAGCACCATCGTCAACC 60.067 52.381 0.00 0.00 0.00 3.77
5179 7290 1.204941 GAGTAGCACCATCGTCAACCT 59.795 52.381 0.00 0.00 0.00 3.50
5180 7291 1.623811 AGTAGCACCATCGTCAACCTT 59.376 47.619 0.00 0.00 0.00 3.50
5181 7292 2.038557 AGTAGCACCATCGTCAACCTTT 59.961 45.455 0.00 0.00 0.00 3.11
5182 7293 1.981256 AGCACCATCGTCAACCTTTT 58.019 45.000 0.00 0.00 0.00 2.27
5183 7294 2.306847 AGCACCATCGTCAACCTTTTT 58.693 42.857 0.00 0.00 0.00 1.94
5207 7318 6.598753 TTTTTCTCAAAGACTACCAACTCG 57.401 37.500 0.00 0.00 0.00 4.18
5208 7319 4.931661 TTCTCAAAGACTACCAACTCGT 57.068 40.909 0.00 0.00 0.00 4.18
5209 7320 4.238761 TCTCAAAGACTACCAACTCGTG 57.761 45.455 0.00 0.00 0.00 4.35
5210 7321 3.887110 TCTCAAAGACTACCAACTCGTGA 59.113 43.478 0.00 0.00 0.00 4.35
5211 7322 4.340097 TCTCAAAGACTACCAACTCGTGAA 59.660 41.667 0.00 0.00 0.00 3.18
5212 7323 5.010719 TCTCAAAGACTACCAACTCGTGAAT 59.989 40.000 0.00 0.00 0.00 2.57
5213 7324 4.988540 TCAAAGACTACCAACTCGTGAATG 59.011 41.667 0.00 0.00 0.00 2.67
5214 7325 2.960819 AGACTACCAACTCGTGAATGC 58.039 47.619 0.00 0.00 0.00 3.56
5215 7326 2.000447 GACTACCAACTCGTGAATGCC 59.000 52.381 0.00 0.00 0.00 4.40
5216 7327 1.346395 ACTACCAACTCGTGAATGCCA 59.654 47.619 0.00 0.00 0.00 4.92
5217 7328 2.027192 ACTACCAACTCGTGAATGCCAT 60.027 45.455 0.00 0.00 0.00 4.40
5218 7329 2.779755 ACCAACTCGTGAATGCCATA 57.220 45.000 0.00 0.00 0.00 2.74
5219 7330 3.281727 ACCAACTCGTGAATGCCATAT 57.718 42.857 0.00 0.00 0.00 1.78
5220 7331 3.620488 ACCAACTCGTGAATGCCATATT 58.380 40.909 0.00 0.00 0.00 1.28
5221 7332 4.776349 ACCAACTCGTGAATGCCATATTA 58.224 39.130 0.00 0.00 0.00 0.98
5222 7333 4.816385 ACCAACTCGTGAATGCCATATTAG 59.184 41.667 0.00 0.00 0.00 1.73
5223 7334 4.319766 CCAACTCGTGAATGCCATATTAGC 60.320 45.833 0.00 0.00 0.00 3.09
5224 7335 4.071961 ACTCGTGAATGCCATATTAGCA 57.928 40.909 0.00 0.00 45.94 3.49
5225 7336 4.060900 ACTCGTGAATGCCATATTAGCAG 58.939 43.478 3.73 0.00 44.90 4.24
5226 7337 4.060900 CTCGTGAATGCCATATTAGCAGT 58.939 43.478 3.73 0.71 44.90 4.40
5227 7338 4.450976 TCGTGAATGCCATATTAGCAGTT 58.549 39.130 3.73 0.00 44.90 3.16
5228 7339 5.606505 TCGTGAATGCCATATTAGCAGTTA 58.393 37.500 3.73 0.00 44.90 2.24
5229 7340 6.230472 TCGTGAATGCCATATTAGCAGTTAT 58.770 36.000 3.73 0.00 44.90 1.89
5230 7341 6.710295 TCGTGAATGCCATATTAGCAGTTATT 59.290 34.615 3.73 0.00 44.90 1.40
5231 7342 7.017645 CGTGAATGCCATATTAGCAGTTATTC 58.982 38.462 3.73 3.47 44.90 1.75
5232 7343 7.095060 CGTGAATGCCATATTAGCAGTTATTCT 60.095 37.037 3.73 0.00 44.90 2.40
5233 7344 8.233190 GTGAATGCCATATTAGCAGTTATTCTC 58.767 37.037 3.73 1.12 44.90 2.87
5234 7345 7.391554 TGAATGCCATATTAGCAGTTATTCTCC 59.608 37.037 3.73 0.00 44.90 3.71
5235 7346 6.439636 TGCCATATTAGCAGTTATTCTCCT 57.560 37.500 0.00 0.00 34.69 3.69
5236 7347 6.467677 TGCCATATTAGCAGTTATTCTCCTC 58.532 40.000 0.00 0.00 34.69 3.71
5237 7348 6.043127 TGCCATATTAGCAGTTATTCTCCTCA 59.957 38.462 0.00 0.00 34.69 3.86
5238 7349 6.593382 GCCATATTAGCAGTTATTCTCCTCAG 59.407 42.308 0.00 0.00 0.00 3.35
5239 7350 7.526192 GCCATATTAGCAGTTATTCTCCTCAGA 60.526 40.741 0.00 0.00 0.00 3.27
5240 7351 8.034215 CCATATTAGCAGTTATTCTCCTCAGAG 58.966 40.741 0.00 0.00 41.93 3.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.461431 CGGCTAGGAACCCTAATTGTTTTT 59.539 41.667 0.00 0.00 35.49 1.94
1 2 4.014406 CGGCTAGGAACCCTAATTGTTTT 58.986 43.478 0.00 0.00 35.49 2.43
2 3 3.617284 CGGCTAGGAACCCTAATTGTTT 58.383 45.455 0.00 0.00 35.49 2.83
3 4 2.682858 GCGGCTAGGAACCCTAATTGTT 60.683 50.000 0.00 0.00 35.49 2.83
4 5 1.134189 GCGGCTAGGAACCCTAATTGT 60.134 52.381 0.00 0.00 35.49 2.71
5 6 1.594331 GCGGCTAGGAACCCTAATTG 58.406 55.000 0.00 0.00 35.49 2.32
6 7 0.472898 GGCGGCTAGGAACCCTAATT 59.527 55.000 0.00 0.00 35.49 1.40
7 8 1.755393 CGGCGGCTAGGAACCCTAAT 61.755 60.000 7.61 0.00 35.49 1.73
8 9 2.428925 CGGCGGCTAGGAACCCTAA 61.429 63.158 7.61 0.00 35.49 2.69
106 115 2.507854 GGGAGGCGCTGCTGGTATA 61.508 63.158 7.64 0.00 0.00 1.47
224 240 0.391793 GAGTGGTTGCTACCTGCCTC 60.392 60.000 18.31 15.25 45.27 4.70
236 252 1.192803 GGGAGGACGAAGGAGTGGTT 61.193 60.000 0.00 0.00 0.00 3.67
298 322 6.136541 ACAAAAATTGAACAGACAGAGGAC 57.863 37.500 0.00 0.00 0.00 3.85
348 374 3.754850 TCACAACATCCAATCTTCAGCAG 59.245 43.478 0.00 0.00 0.00 4.24
413 450 4.432712 ACTTGAATGTGCACTGGAAAAAC 58.567 39.130 19.41 1.94 0.00 2.43
428 466 9.349713 TCCTTTCACATGTAAGTAAACTTGAAT 57.650 29.630 0.00 0.00 37.40 2.57
440 482 5.221224 CCAAGCAAAGTCCTTTCACATGTAA 60.221 40.000 0.00 0.00 0.00 2.41
441 483 4.278170 CCAAGCAAAGTCCTTTCACATGTA 59.722 41.667 0.00 0.00 0.00 2.29
442 484 3.068590 CCAAGCAAAGTCCTTTCACATGT 59.931 43.478 0.00 0.00 0.00 3.21
443 485 3.318839 TCCAAGCAAAGTCCTTTCACATG 59.681 43.478 0.00 0.00 0.00 3.21
455 497 3.119173 TCACAAACACCTTCCAAGCAAAG 60.119 43.478 0.00 0.00 0.00 2.77
563 610 6.236017 TCGTTATCCATTGAACTTTCACAC 57.764 37.500 0.00 0.00 36.83 3.82
571 618 9.438291 CTTTTCATGTATCGTTATCCATTGAAC 57.562 33.333 0.00 0.00 0.00 3.18
651 700 4.184629 ACTCTCTCGAATTGCATGTAACC 58.815 43.478 0.00 0.00 0.00 2.85
679 728 6.094325 CGGCCAGTATAATAACCAAGACAAAA 59.906 38.462 2.24 0.00 0.00 2.44
730 779 4.756642 ACATCTATCATGCCAACAATACCG 59.243 41.667 0.00 0.00 0.00 4.02
890 966 5.771666 CCAGCATGACATAATATGGAAGGTT 59.228 40.000 5.16 0.00 39.69 3.50
1214 1337 8.592998 GGTAATAAAGTGTCGATAGTTCTTGTG 58.407 37.037 2.46 0.00 37.40 3.33
1286 1417 5.304614 TCTTCAGAGCCAACTACAGTAACTT 59.695 40.000 0.00 0.00 0.00 2.66
1532 2698 3.418022 TGGAAACAGATGCAGCACA 57.582 47.368 4.07 0.00 35.01 4.57
1652 3324 5.458779 GTCAACCTACAGATTTGCAAACAAC 59.541 40.000 15.41 9.20 34.87 3.32
1770 3445 3.576078 TGATAGGCCATAACCAACCAG 57.424 47.619 5.01 0.00 0.00 4.00
1901 3596 4.261363 CCAGTTCCTGAAGAAAAGAGTTGC 60.261 45.833 0.00 0.00 35.85 4.17
1993 3688 2.502947 AGTGCATCTCCATAGTCTGCAA 59.497 45.455 0.00 0.00 41.07 4.08
2480 4192 4.487948 TGTTCCTACGTTTAGATTCCACG 58.512 43.478 0.00 0.00 39.86 4.94
2554 4266 1.899814 CACAGCACTGAGTACCCCTTA 59.100 52.381 4.31 0.00 0.00 2.69
3273 5001 2.169769 CCCAGCACCCTCGTATTTCTTA 59.830 50.000 0.00 0.00 0.00 2.10
3595 5325 2.304092 CATGTGATTGCATGCCTACCT 58.696 47.619 16.68 0.00 39.59 3.08
3675 5489 2.229784 GTCCAAGTGAAAAGGCATCCAG 59.770 50.000 0.00 0.00 0.00 3.86
3678 5492 4.327680 ACTAGTCCAAGTGAAAAGGCATC 58.672 43.478 0.00 0.00 0.00 3.91
3930 5990 6.872547 ACATGGACATAATGATCGAAGAGATG 59.127 38.462 0.00 0.00 43.63 2.90
3959 6028 7.120923 TGTAGATACCACTTAATGAAGGACC 57.879 40.000 0.00 0.00 36.95 4.46
4088 6182 1.511318 CGTTCCGCATGTTTGGGTCA 61.511 55.000 0.00 0.00 34.12 4.02
4217 6311 2.747989 AGCAATCGACGTAGACTTCTGA 59.252 45.455 0.00 0.00 0.00 3.27
4298 6392 1.470098 GTACCAATGAGGCTGCAACAG 59.530 52.381 0.50 0.00 43.14 3.16
4318 6412 1.868469 CCATTGCAACACCAGTTTGG 58.132 50.000 0.00 0.00 45.02 3.28
4362 6457 1.267261 AGTCCGAGACACTGAAGAACG 59.733 52.381 6.78 0.00 34.60 3.95
4399 6494 8.538701 TCCAAACATGCAAAAGGAATACATAAT 58.461 29.630 0.00 0.00 0.00 1.28
4449 6548 5.418524 TGATATTTGTTCCACAATCCACAGG 59.581 40.000 0.00 0.00 38.00 4.00
4521 6621 4.019174 CAGGAACATTCTTTAGTGCCCAT 58.981 43.478 0.00 0.00 33.61 4.00
4524 6624 5.453567 AAACAGGAACATTCTTTAGTGCC 57.546 39.130 0.00 0.00 33.29 5.01
4562 6662 6.817765 TTTGATGACAAGTATTTCCAGACC 57.182 37.500 0.00 0.00 37.32 3.85
4563 6663 9.994432 CTATTTTGATGACAAGTATTTCCAGAC 57.006 33.333 0.00 0.00 37.32 3.51
4564 6664 9.958180 TCTATTTTGATGACAAGTATTTCCAGA 57.042 29.630 0.00 0.00 37.32 3.86
4619 6719 9.499479 GTCATTGAAATGGATGTATCTAGATGT 57.501 33.333 15.79 1.25 37.03 3.06
4620 6720 9.498176 TGTCATTGAAATGGATGTATCTAGATG 57.502 33.333 15.79 0.00 37.03 2.90
4622 6722 9.551734 CTTGTCATTGAAATGGATGTATCTAGA 57.448 33.333 0.00 0.00 37.03 2.43
4623 6723 9.334947 ACTTGTCATTGAAATGGATGTATCTAG 57.665 33.333 3.31 0.00 37.03 2.43
4625 6725 9.857656 ATACTTGTCATTGAAATGGATGTATCT 57.142 29.630 3.31 0.00 37.03 1.98
4629 6729 8.253113 GGAAATACTTGTCATTGAAATGGATGT 58.747 33.333 3.31 2.77 37.03 3.06
4630 6730 7.433131 CGGAAATACTTGTCATTGAAATGGATG 59.567 37.037 3.31 0.00 37.03 3.51
4631 6731 7.416664 CCGGAAATACTTGTCATTGAAATGGAT 60.417 37.037 0.00 0.00 37.03 3.41
4632 6732 6.127758 CCGGAAATACTTGTCATTGAAATGGA 60.128 38.462 0.00 0.00 37.03 3.41
4633 6733 6.035843 CCGGAAATACTTGTCATTGAAATGG 58.964 40.000 0.00 0.00 37.03 3.16
4634 6734 6.747280 GTCCGGAAATACTTGTCATTGAAATG 59.253 38.462 5.23 0.00 37.75 2.32
4635 6735 6.403200 CGTCCGGAAATACTTGTCATTGAAAT 60.403 38.462 5.23 0.00 0.00 2.17
4636 6736 5.106869 CGTCCGGAAATACTTGTCATTGAAA 60.107 40.000 5.23 0.00 0.00 2.69
4637 6737 4.390603 CGTCCGGAAATACTTGTCATTGAA 59.609 41.667 5.23 0.00 0.00 2.69
4638 6738 3.930229 CGTCCGGAAATACTTGTCATTGA 59.070 43.478 5.23 0.00 0.00 2.57
4639 6739 3.063452 CCGTCCGGAAATACTTGTCATTG 59.937 47.826 5.23 0.00 37.50 2.82
4640 6740 3.055675 TCCGTCCGGAAATACTTGTCATT 60.056 43.478 5.23 0.00 42.05 2.57
4641 6741 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
4642 6742 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
4643 6743 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
4644 6744 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
4645 6745 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
4646 6746 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
4647 6747 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
4648 6748 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
4649 6749 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
4650 6750 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
4651 6751 0.967380 GTACTCCCTCCGTCCGGAAA 60.967 60.000 5.23 0.00 44.66 3.13
4652 6752 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
4653 6753 1.856539 AAGTACTCCCTCCGTCCGGA 61.857 60.000 0.00 0.00 42.90 5.14
4654 6754 0.969409 AAAGTACTCCCTCCGTCCGG 60.969 60.000 0.00 0.00 0.00 5.14
4655 6755 0.893447 AAAAGTACTCCCTCCGTCCG 59.107 55.000 0.00 0.00 0.00 4.79
4656 6756 4.541973 TTAAAAAGTACTCCCTCCGTCC 57.458 45.455 0.00 0.00 0.00 4.79
4657 6757 8.728337 ATAAATTAAAAAGTACTCCCTCCGTC 57.272 34.615 0.00 0.00 0.00 4.79
4658 6758 8.546322 AGATAAATTAAAAAGTACTCCCTCCGT 58.454 33.333 0.00 0.00 0.00 4.69
4659 6759 8.827677 CAGATAAATTAAAAAGTACTCCCTCCG 58.172 37.037 0.00 0.00 0.00 4.63
4660 6760 9.682465 ACAGATAAATTAAAAAGTACTCCCTCC 57.318 33.333 0.00 0.00 0.00 4.30
4669 6769 9.783256 GACCGCAATACAGATAAATTAAAAAGT 57.217 29.630 0.00 0.00 0.00 2.66
4670 6770 9.233232 GGACCGCAATACAGATAAATTAAAAAG 57.767 33.333 0.00 0.00 0.00 2.27
4677 6777 6.238374 CGAAAAGGACCGCAATACAGATAAAT 60.238 38.462 0.00 0.00 0.00 1.40
4692 6792 1.071857 AGTTCACTCCCGAAAAGGACC 59.928 52.381 0.00 0.00 45.00 4.46
4701 6801 1.341531 ACAGAACTGAGTTCACTCCCG 59.658 52.381 25.45 9.88 44.11 5.14
4704 6804 5.112686 ACAAGAACAGAACTGAGTTCACTC 58.887 41.667 25.45 17.49 44.11 3.51
4747 6847 7.630924 ACATTCATTTCTCCGACGAATATTTC 58.369 34.615 0.00 0.00 0.00 2.17
4753 6853 5.902681 AGATACATTCATTTCTCCGACGAA 58.097 37.500 0.00 0.00 0.00 3.85
4754 6854 5.515797 AGATACATTCATTTCTCCGACGA 57.484 39.130 0.00 0.00 0.00 4.20
4755 6855 6.579292 GTCTAGATACATTCATTTCTCCGACG 59.421 42.308 0.00 0.00 0.00 5.12
4802 6912 3.314080 GTCGCGGGAATGGATGAAAATAA 59.686 43.478 6.13 0.00 0.00 1.40
4804 6914 1.676006 GTCGCGGGAATGGATGAAAAT 59.324 47.619 6.13 0.00 0.00 1.82
4809 6919 1.024271 ATTTGTCGCGGGAATGGATG 58.976 50.000 6.13 0.00 0.00 3.51
4812 6923 3.550030 GGAATTATTTGTCGCGGGAATGG 60.550 47.826 6.13 0.00 0.00 3.16
4817 6928 0.306533 CCGGAATTATTTGTCGCGGG 59.693 55.000 6.13 0.00 0.00 6.13
4818 6929 1.004292 GTCCGGAATTATTTGTCGCGG 60.004 52.381 5.23 0.00 0.00 6.46
4819 6930 1.331680 CGTCCGGAATTATTTGTCGCG 60.332 52.381 5.23 0.00 0.00 5.87
4820 6931 1.004292 CCGTCCGGAATTATTTGTCGC 60.004 52.381 5.23 0.00 37.50 5.19
4821 6932 2.538449 CTCCGTCCGGAATTATTTGTCG 59.462 50.000 5.23 1.25 44.66 4.35
4827 6938 1.339097 CTCCCTCCGTCCGGAATTAT 58.661 55.000 5.23 0.00 44.66 1.28
4830 6941 0.754587 GTACTCCCTCCGTCCGGAAT 60.755 60.000 5.23 0.00 44.66 3.01
4833 6944 0.110104 ATAGTACTCCCTCCGTCCGG 59.890 60.000 0.00 0.00 0.00 5.14
4834 6945 1.202734 TGATAGTACTCCCTCCGTCCG 60.203 57.143 0.00 0.00 0.00 4.79
4839 6950 5.598830 TGTTTGATCTGATAGTACTCCCTCC 59.401 44.000 0.00 0.00 0.00 4.30
4847 6958 3.704566 AGCCGGTGTTTGATCTGATAGTA 59.295 43.478 1.90 0.00 0.00 1.82
4848 6959 2.501723 AGCCGGTGTTTGATCTGATAGT 59.498 45.455 1.90 0.00 0.00 2.12
4849 6960 2.868583 CAGCCGGTGTTTGATCTGATAG 59.131 50.000 1.90 0.00 0.00 2.08
4858 6969 0.957395 AGCAGATCAGCCGGTGTTTG 60.957 55.000 6.46 0.00 34.23 2.93
4865 6976 0.877071 AAAACACAGCAGATCAGCCG 59.123 50.000 6.46 0.00 34.23 5.52
4868 6979 3.358707 TGCAAAAACACAGCAGATCAG 57.641 42.857 0.00 0.00 33.75 2.90
4883 6994 1.993956 ACCCACTGTTATGCTGCAAA 58.006 45.000 6.36 0.00 0.00 3.68
4884 6995 1.993956 AACCCACTGTTATGCTGCAA 58.006 45.000 6.36 0.00 34.69 4.08
4885 6996 1.993956 AAACCCACTGTTATGCTGCA 58.006 45.000 4.13 4.13 35.67 4.41
4886 6997 3.081804 ACTAAACCCACTGTTATGCTGC 58.918 45.455 0.00 0.00 35.67 5.25
4887 6998 6.811253 TTTACTAAACCCACTGTTATGCTG 57.189 37.500 0.00 0.00 35.67 4.41
4888 6999 8.303876 CAAATTTACTAAACCCACTGTTATGCT 58.696 33.333 0.00 0.00 35.67 3.79
4889 7000 7.544217 CCAAATTTACTAAACCCACTGTTATGC 59.456 37.037 0.00 0.00 35.67 3.14
4890 7001 8.581578 ACCAAATTTACTAAACCCACTGTTATG 58.418 33.333 0.00 0.00 35.67 1.90
4891 7002 8.715190 ACCAAATTTACTAAACCCACTGTTAT 57.285 30.769 0.00 0.00 35.67 1.89
4892 7003 8.000127 AGACCAAATTTACTAAACCCACTGTTA 59.000 33.333 0.00 0.00 35.67 2.41
4893 7004 6.837048 AGACCAAATTTACTAAACCCACTGTT 59.163 34.615 0.00 0.00 39.43 3.16
4894 7005 6.370453 AGACCAAATTTACTAAACCCACTGT 58.630 36.000 0.00 0.00 0.00 3.55
4895 7006 6.715264 AGAGACCAAATTTACTAAACCCACTG 59.285 38.462 0.00 0.00 0.00 3.66
4896 7007 6.849151 AGAGACCAAATTTACTAAACCCACT 58.151 36.000 0.00 0.00 0.00 4.00
4897 7008 6.940867 AGAGAGACCAAATTTACTAAACCCAC 59.059 38.462 0.00 0.00 0.00 4.61
4898 7009 7.086685 AGAGAGACCAAATTTACTAAACCCA 57.913 36.000 0.00 0.00 0.00 4.51
4899 7010 8.537858 TCTAGAGAGACCAAATTTACTAAACCC 58.462 37.037 0.00 0.00 0.00 4.11
4900 7011 9.589111 CTCTAGAGAGACCAAATTTACTAAACC 57.411 37.037 15.05 0.00 44.74 3.27
4903 7014 8.750298 CCACTCTAGAGAGACCAAATTTACTAA 58.250 37.037 26.57 0.00 44.74 2.24
4904 7015 8.114102 TCCACTCTAGAGAGACCAAATTTACTA 58.886 37.037 26.57 0.00 44.74 1.82
4905 7016 6.954684 TCCACTCTAGAGAGACCAAATTTACT 59.045 38.462 26.57 0.00 44.74 2.24
4906 7017 7.093684 ACTCCACTCTAGAGAGACCAAATTTAC 60.094 40.741 26.57 0.00 44.74 2.01
4907 7018 6.954684 ACTCCACTCTAGAGAGACCAAATTTA 59.045 38.462 26.57 0.00 44.74 1.40
4908 7019 5.782845 ACTCCACTCTAGAGAGACCAAATTT 59.217 40.000 26.57 0.00 44.74 1.82
4909 7020 5.337788 ACTCCACTCTAGAGAGACCAAATT 58.662 41.667 26.57 0.00 44.74 1.82
4910 7021 4.941713 ACTCCACTCTAGAGAGACCAAAT 58.058 43.478 26.57 0.00 44.74 2.32
4911 7022 4.390129 ACTCCACTCTAGAGAGACCAAA 57.610 45.455 26.57 3.62 44.74 3.28
4912 7023 5.718801 ATACTCCACTCTAGAGAGACCAA 57.281 43.478 26.57 7.75 44.74 3.67
4913 7024 7.395525 AATATACTCCACTCTAGAGAGACCA 57.604 40.000 26.57 10.28 44.74 4.02
4914 7025 8.573035 CAAAATATACTCCACTCTAGAGAGACC 58.427 40.741 26.57 0.00 44.74 3.85
4915 7026 9.127277 ACAAAATATACTCCACTCTAGAGAGAC 57.873 37.037 26.57 0.00 44.74 3.36
4916 7027 9.344772 GACAAAATATACTCCACTCTAGAGAGA 57.655 37.037 26.57 19.21 44.74 3.10
4918 7029 8.059461 TGGACAAAATATACTCCACTCTAGAGA 58.941 37.037 26.57 2.68 35.27 3.10
4919 7030 8.239038 TGGACAAAATATACTCCACTCTAGAG 57.761 38.462 18.49 18.49 37.39 2.43
4920 7031 8.603898 TTGGACAAAATATACTCCACTCTAGA 57.396 34.615 0.00 0.00 32.33 2.43
4921 7032 7.928706 CCTTGGACAAAATATACTCCACTCTAG 59.071 40.741 0.00 0.00 32.33 2.43
4922 7033 7.622081 TCCTTGGACAAAATATACTCCACTCTA 59.378 37.037 0.00 0.00 32.33 2.43
4923 7034 6.443849 TCCTTGGACAAAATATACTCCACTCT 59.556 38.462 0.00 0.00 32.33 3.24
4924 7035 6.539103 GTCCTTGGACAAAATATACTCCACTC 59.461 42.308 14.34 0.00 32.33 3.51
4925 7036 6.415573 GTCCTTGGACAAAATATACTCCACT 58.584 40.000 14.34 0.00 32.33 4.00
4926 7037 5.589050 GGTCCTTGGACAAAATATACTCCAC 59.411 44.000 19.90 0.00 32.33 4.02
4927 7038 5.491078 AGGTCCTTGGACAAAATATACTCCA 59.509 40.000 19.90 0.00 0.00 3.86
4928 7039 5.823045 CAGGTCCTTGGACAAAATATACTCC 59.177 44.000 19.90 0.05 0.00 3.85
4929 7040 6.415573 ACAGGTCCTTGGACAAAATATACTC 58.584 40.000 19.90 0.63 0.00 2.59
4930 7041 6.388619 ACAGGTCCTTGGACAAAATATACT 57.611 37.500 19.90 4.06 0.00 2.12
4931 7042 7.462571 AAACAGGTCCTTGGACAAAATATAC 57.537 36.000 19.90 1.93 0.00 1.47
4932 7043 6.373216 CGAAACAGGTCCTTGGACAAAATATA 59.627 38.462 19.90 0.00 0.00 0.86
4933 7044 5.183140 CGAAACAGGTCCTTGGACAAAATAT 59.817 40.000 19.90 3.16 0.00 1.28
4934 7045 4.517453 CGAAACAGGTCCTTGGACAAAATA 59.483 41.667 19.90 0.00 0.00 1.40
4935 7046 3.317993 CGAAACAGGTCCTTGGACAAAAT 59.682 43.478 19.90 3.62 0.00 1.82
4936 7047 2.685897 CGAAACAGGTCCTTGGACAAAA 59.314 45.455 19.90 0.00 0.00 2.44
4937 7048 2.294074 CGAAACAGGTCCTTGGACAAA 58.706 47.619 19.90 0.00 0.00 2.83
4938 7049 1.961793 CGAAACAGGTCCTTGGACAA 58.038 50.000 19.90 0.00 0.00 3.18
4939 7050 0.534203 GCGAAACAGGTCCTTGGACA 60.534 55.000 19.90 0.00 0.00 4.02
4940 7051 1.235281 GGCGAAACAGGTCCTTGGAC 61.235 60.000 11.13 11.13 0.00 4.02
4941 7052 1.072505 GGCGAAACAGGTCCTTGGA 59.927 57.895 0.00 0.00 0.00 3.53
4942 7053 2.325082 CGGCGAAACAGGTCCTTGG 61.325 63.158 0.00 0.00 0.00 3.61
4943 7054 1.597027 ACGGCGAAACAGGTCCTTG 60.597 57.895 16.62 0.00 0.00 3.61
4944 7055 1.597027 CACGGCGAAACAGGTCCTT 60.597 57.895 16.62 0.00 0.00 3.36
4945 7056 2.030562 CACGGCGAAACAGGTCCT 59.969 61.111 16.62 0.00 0.00 3.85
4946 7057 1.566018 CTTCACGGCGAAACAGGTCC 61.566 60.000 16.62 0.00 31.71 4.46
4947 7058 1.566018 CCTTCACGGCGAAACAGGTC 61.566 60.000 16.62 0.00 31.71 3.85
4948 7059 1.597027 CCTTCACGGCGAAACAGGT 60.597 57.895 16.62 0.00 31.71 4.00
4949 7060 2.325082 CCCTTCACGGCGAAACAGG 61.325 63.158 16.62 12.79 31.71 4.00
4950 7061 1.597027 ACCCTTCACGGCGAAACAG 60.597 57.895 16.62 3.39 31.71 3.16
4951 7062 1.890041 CACCCTTCACGGCGAAACA 60.890 57.895 16.62 0.00 31.71 2.83
4952 7063 1.595929 TCACCCTTCACGGCGAAAC 60.596 57.895 16.62 0.00 31.71 2.78
4953 7064 1.595929 GTCACCCTTCACGGCGAAA 60.596 57.895 16.62 6.60 31.71 3.46
4954 7065 2.029964 GTCACCCTTCACGGCGAA 59.970 61.111 16.62 0.00 0.00 4.70
4955 7066 2.915659 AGTCACCCTTCACGGCGA 60.916 61.111 16.62 0.00 0.00 5.54
4956 7067 2.432628 GAGTCACCCTTCACGGCG 60.433 66.667 4.80 4.80 0.00 6.46
4957 7068 1.374758 CAGAGTCACCCTTCACGGC 60.375 63.158 0.00 0.00 0.00 5.68
4958 7069 0.898320 ATCAGAGTCACCCTTCACGG 59.102 55.000 0.00 0.00 0.00 4.94
4959 7070 2.738846 CAAATCAGAGTCACCCTTCACG 59.261 50.000 0.00 0.00 0.00 4.35
4960 7071 3.077359 CCAAATCAGAGTCACCCTTCAC 58.923 50.000 0.00 0.00 0.00 3.18
4961 7072 2.553028 GCCAAATCAGAGTCACCCTTCA 60.553 50.000 0.00 0.00 0.00 3.02
4962 7073 2.087646 GCCAAATCAGAGTCACCCTTC 58.912 52.381 0.00 0.00 0.00 3.46
4963 7074 1.272147 GGCCAAATCAGAGTCACCCTT 60.272 52.381 0.00 0.00 0.00 3.95
4964 7075 0.329596 GGCCAAATCAGAGTCACCCT 59.670 55.000 0.00 0.00 0.00 4.34
4965 7076 1.026718 CGGCCAAATCAGAGTCACCC 61.027 60.000 2.24 0.00 0.00 4.61
4966 7077 0.036388 TCGGCCAAATCAGAGTCACC 60.036 55.000 2.24 0.00 0.00 4.02
4967 7078 2.029838 ATCGGCCAAATCAGAGTCAC 57.970 50.000 2.24 0.00 0.00 3.67
4968 7079 2.787473 AATCGGCCAAATCAGAGTCA 57.213 45.000 2.24 0.00 0.00 3.41
4969 7080 4.440839 AAAAATCGGCCAAATCAGAGTC 57.559 40.909 2.24 0.00 0.00 3.36
4970 7081 5.253330 TCTAAAAATCGGCCAAATCAGAGT 58.747 37.500 2.24 0.00 0.00 3.24
4971 7082 5.220931 CCTCTAAAAATCGGCCAAATCAGAG 60.221 44.000 2.24 5.24 0.00 3.35
4972 7083 4.640201 CCTCTAAAAATCGGCCAAATCAGA 59.360 41.667 2.24 0.00 0.00 3.27
4973 7084 4.640201 TCCTCTAAAAATCGGCCAAATCAG 59.360 41.667 2.24 0.00 0.00 2.90
4974 7085 4.398044 GTCCTCTAAAAATCGGCCAAATCA 59.602 41.667 2.24 0.00 0.00 2.57
4975 7086 4.398044 TGTCCTCTAAAAATCGGCCAAATC 59.602 41.667 2.24 0.00 0.00 2.17
4976 7087 4.157840 GTGTCCTCTAAAAATCGGCCAAAT 59.842 41.667 2.24 0.00 0.00 2.32
4977 7088 3.504520 GTGTCCTCTAAAAATCGGCCAAA 59.495 43.478 2.24 0.00 0.00 3.28
4978 7089 3.078837 GTGTCCTCTAAAAATCGGCCAA 58.921 45.455 2.24 0.00 0.00 4.52
4979 7090 2.706890 GTGTCCTCTAAAAATCGGCCA 58.293 47.619 2.24 0.00 0.00 5.36
4980 7091 1.664151 CGTGTCCTCTAAAAATCGGCC 59.336 52.381 0.00 0.00 0.00 6.13
4981 7092 1.062148 GCGTGTCCTCTAAAAATCGGC 59.938 52.381 0.00 0.00 0.00 5.54
4982 7093 1.664151 GGCGTGTCCTCTAAAAATCGG 59.336 52.381 0.00 0.00 0.00 4.18
4983 7094 2.343101 TGGCGTGTCCTCTAAAAATCG 58.657 47.619 0.00 0.00 35.26 3.34
4984 7095 3.689649 ACATGGCGTGTCCTCTAAAAATC 59.310 43.478 6.51 0.00 35.77 2.17
4985 7096 3.440173 CACATGGCGTGTCCTCTAAAAAT 59.560 43.478 9.92 0.00 39.62 1.82
4986 7097 2.811431 CACATGGCGTGTCCTCTAAAAA 59.189 45.455 9.92 0.00 39.62 1.94
4987 7098 2.422597 CACATGGCGTGTCCTCTAAAA 58.577 47.619 9.92 0.00 39.62 1.52
4988 7099 2.093306 CACATGGCGTGTCCTCTAAA 57.907 50.000 9.92 0.00 39.62 1.85
4989 7100 3.832704 CACATGGCGTGTCCTCTAA 57.167 52.632 9.92 0.00 39.62 2.10
5000 7111 2.481185 CACCAATTTTCTTGCACATGGC 59.519 45.455 0.00 0.00 45.13 4.40
5001 7112 3.742369 GTCACCAATTTTCTTGCACATGG 59.258 43.478 0.00 0.00 0.00 3.66
5002 7113 4.370049 TGTCACCAATTTTCTTGCACATG 58.630 39.130 0.00 0.00 0.00 3.21
5003 7114 4.669206 TGTCACCAATTTTCTTGCACAT 57.331 36.364 0.00 0.00 0.00 3.21
5004 7115 4.180057 GTTGTCACCAATTTTCTTGCACA 58.820 39.130 0.00 0.00 32.11 4.57
5005 7116 3.555547 GGTTGTCACCAATTTTCTTGCAC 59.444 43.478 0.00 0.00 43.61 4.57
5006 7117 3.791245 GGTTGTCACCAATTTTCTTGCA 58.209 40.909 0.00 0.00 43.61 4.08
5018 7129 3.071479 TGAATTAGCGAAGGTTGTCACC 58.929 45.455 0.00 0.00 44.67 4.02
5019 7130 4.451096 TCTTGAATTAGCGAAGGTTGTCAC 59.549 41.667 0.00 0.00 40.68 3.67
5020 7131 4.637276 TCTTGAATTAGCGAAGGTTGTCA 58.363 39.130 0.00 0.00 40.68 3.58
5021 7132 5.803020 ATCTTGAATTAGCGAAGGTTGTC 57.197 39.130 0.00 0.00 40.68 3.18
5022 7133 5.123979 GGAATCTTGAATTAGCGAAGGTTGT 59.876 40.000 0.00 0.00 40.68 3.32
5023 7134 5.573146 GGAATCTTGAATTAGCGAAGGTTG 58.427 41.667 0.00 0.00 40.68 3.77
5024 7135 4.332819 CGGAATCTTGAATTAGCGAAGGTT 59.667 41.667 0.00 0.00 40.68 3.50
5025 7136 3.871594 CGGAATCTTGAATTAGCGAAGGT 59.128 43.478 0.00 0.00 44.89 3.50
5026 7137 3.303395 GCGGAATCTTGAATTAGCGAAGG 60.303 47.826 0.00 0.00 0.00 3.46
5027 7138 3.303395 GGCGGAATCTTGAATTAGCGAAG 60.303 47.826 0.00 0.00 0.00 3.79
5028 7139 2.612212 GGCGGAATCTTGAATTAGCGAA 59.388 45.455 0.00 0.00 0.00 4.70
5029 7140 2.210116 GGCGGAATCTTGAATTAGCGA 58.790 47.619 0.00 0.00 0.00 4.93
5030 7141 1.939934 TGGCGGAATCTTGAATTAGCG 59.060 47.619 0.00 0.00 0.00 4.26
5031 7142 2.286418 CGTGGCGGAATCTTGAATTAGC 60.286 50.000 0.00 0.00 0.00 3.09
5032 7143 3.592381 CGTGGCGGAATCTTGAATTAG 57.408 47.619 0.00 0.00 0.00 1.73
5046 7157 2.666356 GCCAAAATTTGCCGTGGCG 61.666 57.895 14.22 0.00 46.48 5.69
5048 7159 2.376808 TATGCCAAAATTTGCCGTGG 57.623 45.000 0.00 2.73 0.00 4.94
5049 7160 3.062763 TGTTATGCCAAAATTTGCCGTG 58.937 40.909 0.00 0.00 0.00 4.94
5050 7161 3.324993 CTGTTATGCCAAAATTTGCCGT 58.675 40.909 0.00 0.00 0.00 5.68
5051 7162 2.672381 CCTGTTATGCCAAAATTTGCCG 59.328 45.455 0.00 0.00 0.00 5.69
5052 7163 2.419673 GCCTGTTATGCCAAAATTTGCC 59.580 45.455 0.00 0.00 0.00 4.52
5053 7164 3.072944 TGCCTGTTATGCCAAAATTTGC 58.927 40.909 0.00 0.00 0.00 3.68
5054 7165 4.936411 TGATGCCTGTTATGCCAAAATTTG 59.064 37.500 0.00 0.00 0.00 2.32
5055 7166 5.163281 TGATGCCTGTTATGCCAAAATTT 57.837 34.783 0.00 0.00 0.00 1.82
5056 7167 4.822685 TGATGCCTGTTATGCCAAAATT 57.177 36.364 0.00 0.00 0.00 1.82
5057 7168 4.822685 TTGATGCCTGTTATGCCAAAAT 57.177 36.364 0.00 0.00 0.00 1.82
5058 7169 4.314121 GTTTGATGCCTGTTATGCCAAAA 58.686 39.130 0.00 0.00 0.00 2.44
5059 7170 3.306641 GGTTTGATGCCTGTTATGCCAAA 60.307 43.478 0.00 0.00 0.00 3.28
5060 7171 2.233431 GGTTTGATGCCTGTTATGCCAA 59.767 45.455 0.00 0.00 0.00 4.52
5061 7172 1.824230 GGTTTGATGCCTGTTATGCCA 59.176 47.619 0.00 0.00 0.00 4.92
5062 7173 1.824230 TGGTTTGATGCCTGTTATGCC 59.176 47.619 0.00 0.00 0.00 4.40
5063 7174 3.591196 TTGGTTTGATGCCTGTTATGC 57.409 42.857 0.00 0.00 0.00 3.14
5064 7175 3.919804 CGTTTGGTTTGATGCCTGTTATG 59.080 43.478 0.00 0.00 0.00 1.90
5065 7176 3.823873 TCGTTTGGTTTGATGCCTGTTAT 59.176 39.130 0.00 0.00 0.00 1.89
5066 7177 3.215151 TCGTTTGGTTTGATGCCTGTTA 58.785 40.909 0.00 0.00 0.00 2.41
5067 7178 2.028130 TCGTTTGGTTTGATGCCTGTT 58.972 42.857 0.00 0.00 0.00 3.16
5068 7179 1.608590 CTCGTTTGGTTTGATGCCTGT 59.391 47.619 0.00 0.00 0.00 4.00
5069 7180 1.666888 GCTCGTTTGGTTTGATGCCTG 60.667 52.381 0.00 0.00 0.00 4.85
5070 7181 0.598065 GCTCGTTTGGTTTGATGCCT 59.402 50.000 0.00 0.00 0.00 4.75
5071 7182 0.313672 TGCTCGTTTGGTTTGATGCC 59.686 50.000 0.00 0.00 0.00 4.40
5072 7183 2.352503 ATGCTCGTTTGGTTTGATGC 57.647 45.000 0.00 0.00 0.00 3.91
5073 7184 4.685169 ACTATGCTCGTTTGGTTTGATG 57.315 40.909 0.00 0.00 0.00 3.07
5074 7185 4.759693 TGAACTATGCTCGTTTGGTTTGAT 59.240 37.500 0.00 0.00 0.00 2.57
5075 7186 4.130857 TGAACTATGCTCGTTTGGTTTGA 58.869 39.130 0.00 0.00 0.00 2.69
5076 7187 4.481930 TGAACTATGCTCGTTTGGTTTG 57.518 40.909 0.00 0.00 0.00 2.93
5077 7188 4.759693 TCATGAACTATGCTCGTTTGGTTT 59.240 37.500 0.00 0.00 36.70 3.27
5078 7189 4.323417 TCATGAACTATGCTCGTTTGGTT 58.677 39.130 0.00 0.00 36.70 3.67
5079 7190 3.937814 TCATGAACTATGCTCGTTTGGT 58.062 40.909 0.00 0.00 36.70 3.67
5080 7191 4.260907 CCATCATGAACTATGCTCGTTTGG 60.261 45.833 0.00 0.00 36.70 3.28
5081 7192 4.571984 TCCATCATGAACTATGCTCGTTTG 59.428 41.667 0.00 0.00 36.70 2.93
5082 7193 4.769688 TCCATCATGAACTATGCTCGTTT 58.230 39.130 0.00 0.00 36.70 3.60
5083 7194 4.406648 TCCATCATGAACTATGCTCGTT 57.593 40.909 0.00 0.00 36.70 3.85
5084 7195 4.039609 TGATCCATCATGAACTATGCTCGT 59.960 41.667 0.00 0.00 36.70 4.18
5085 7196 4.388165 GTGATCCATCATGAACTATGCTCG 59.612 45.833 0.00 0.00 39.30 5.03
5086 7197 4.694509 GGTGATCCATCATGAACTATGCTC 59.305 45.833 0.00 0.00 39.30 4.26
5087 7198 4.649692 GGTGATCCATCATGAACTATGCT 58.350 43.478 0.00 0.00 39.30 3.79
5088 7199 3.434641 CGGTGATCCATCATGAACTATGC 59.565 47.826 0.00 0.00 39.30 3.14
5089 7200 4.886579 TCGGTGATCCATCATGAACTATG 58.113 43.478 0.00 0.00 39.30 2.23
5090 7201 5.752036 ATCGGTGATCCATCATGAACTAT 57.248 39.130 0.00 0.00 39.30 2.12
5091 7202 5.538433 TGTATCGGTGATCCATCATGAACTA 59.462 40.000 0.00 0.00 39.30 2.24
5092 7203 4.344968 TGTATCGGTGATCCATCATGAACT 59.655 41.667 0.00 0.00 39.30 3.01
5093 7204 4.631131 TGTATCGGTGATCCATCATGAAC 58.369 43.478 0.00 0.00 39.30 3.18
5094 7205 4.953940 TGTATCGGTGATCCATCATGAA 57.046 40.909 0.00 0.00 39.30 2.57
5095 7206 4.800582 GCTTGTATCGGTGATCCATCATGA 60.801 45.833 0.00 0.00 39.30 3.07
5096 7207 3.434641 GCTTGTATCGGTGATCCATCATG 59.565 47.826 0.00 0.00 39.30 3.07
5097 7208 3.071457 TGCTTGTATCGGTGATCCATCAT 59.929 43.478 0.00 0.00 39.30 2.45
5098 7209 2.433970 TGCTTGTATCGGTGATCCATCA 59.566 45.455 0.00 0.00 0.00 3.07
5099 7210 3.062763 CTGCTTGTATCGGTGATCCATC 58.937 50.000 0.00 0.00 0.00 3.51
5100 7211 2.700371 TCTGCTTGTATCGGTGATCCAT 59.300 45.455 0.00 0.00 0.00 3.41
5101 7212 2.101415 CTCTGCTTGTATCGGTGATCCA 59.899 50.000 0.00 0.00 0.00 3.41
5102 7213 2.362397 TCTCTGCTTGTATCGGTGATCC 59.638 50.000 0.00 0.00 0.00 3.36
5103 7214 3.067461 AGTCTCTGCTTGTATCGGTGATC 59.933 47.826 0.00 0.00 0.00 2.92
5104 7215 3.027412 AGTCTCTGCTTGTATCGGTGAT 58.973 45.455 0.00 0.00 0.00 3.06
5105 7216 2.164422 CAGTCTCTGCTTGTATCGGTGA 59.836 50.000 0.00 0.00 0.00 4.02
5106 7217 2.164422 TCAGTCTCTGCTTGTATCGGTG 59.836 50.000 0.00 0.00 0.00 4.94
5107 7218 2.447443 TCAGTCTCTGCTTGTATCGGT 58.553 47.619 0.00 0.00 0.00 4.69
5108 7219 3.510388 TTCAGTCTCTGCTTGTATCGG 57.490 47.619 0.00 0.00 0.00 4.18
5109 7220 5.105063 TGAATTCAGTCTCTGCTTGTATCG 58.895 41.667 3.38 0.00 0.00 2.92
5110 7221 6.593382 ACTTGAATTCAGTCTCTGCTTGTATC 59.407 38.462 8.41 0.00 0.00 2.24
5111 7222 6.471146 ACTTGAATTCAGTCTCTGCTTGTAT 58.529 36.000 8.41 0.00 0.00 2.29
5112 7223 5.858381 ACTTGAATTCAGTCTCTGCTTGTA 58.142 37.500 8.41 0.00 0.00 2.41
5113 7224 4.712476 ACTTGAATTCAGTCTCTGCTTGT 58.288 39.130 8.41 0.00 0.00 3.16
5114 7225 6.791887 TTACTTGAATTCAGTCTCTGCTTG 57.208 37.500 8.41 0.00 0.00 4.01
5115 7226 7.807977 TTTTACTTGAATTCAGTCTCTGCTT 57.192 32.000 8.41 0.00 0.00 3.91
5116 7227 7.992754 ATTTTACTTGAATTCAGTCTCTGCT 57.007 32.000 8.41 0.00 0.00 4.24
5117 7228 9.766277 CTTATTTTACTTGAATTCAGTCTCTGC 57.234 33.333 8.41 0.00 0.00 4.26
5129 7240 9.996554 TGAGTCTGTGATCTTATTTTACTTGAA 57.003 29.630 0.00 0.00 0.00 2.69
5133 7244 9.814899 CAGATGAGTCTGTGATCTTATTTTACT 57.185 33.333 0.00 0.00 45.51 2.24
5153 7264 2.359214 GACGATGGTGCTACTCAGATGA 59.641 50.000 0.00 0.00 0.00 2.92
5154 7265 2.099756 TGACGATGGTGCTACTCAGATG 59.900 50.000 0.00 0.00 0.00 2.90
5155 7266 2.379005 TGACGATGGTGCTACTCAGAT 58.621 47.619 0.00 0.00 0.00 2.90
5156 7267 1.834188 TGACGATGGTGCTACTCAGA 58.166 50.000 0.00 0.00 0.00 3.27
5157 7268 2.263077 GTTGACGATGGTGCTACTCAG 58.737 52.381 0.00 0.00 0.00 3.35
5158 7269 1.067142 GGTTGACGATGGTGCTACTCA 60.067 52.381 0.00 0.00 0.00 3.41
5159 7270 1.204941 AGGTTGACGATGGTGCTACTC 59.795 52.381 0.00 0.00 0.00 2.59
5160 7271 1.267121 AGGTTGACGATGGTGCTACT 58.733 50.000 0.00 0.00 0.00 2.57
5161 7272 2.094762 AAGGTTGACGATGGTGCTAC 57.905 50.000 0.00 0.00 0.00 3.58
5162 7273 2.851263 AAAGGTTGACGATGGTGCTA 57.149 45.000 0.00 0.00 0.00 3.49
5163 7274 1.981256 AAAAGGTTGACGATGGTGCT 58.019 45.000 0.00 0.00 0.00 4.40
5164 7275 2.793278 AAAAAGGTTGACGATGGTGC 57.207 45.000 0.00 0.00 0.00 5.01
5184 7295 6.036735 CACGAGTTGGTAGTCTTTGAGAAAAA 59.963 38.462 0.00 0.00 0.00 1.94
5185 7296 5.522460 CACGAGTTGGTAGTCTTTGAGAAAA 59.478 40.000 0.00 0.00 0.00 2.29
5186 7297 5.047847 CACGAGTTGGTAGTCTTTGAGAAA 58.952 41.667 0.00 0.00 0.00 2.52
5187 7298 4.340097 TCACGAGTTGGTAGTCTTTGAGAA 59.660 41.667 0.00 0.00 0.00 2.87
5188 7299 3.887110 TCACGAGTTGGTAGTCTTTGAGA 59.113 43.478 0.00 0.00 0.00 3.27
5189 7300 4.238761 TCACGAGTTGGTAGTCTTTGAG 57.761 45.455 0.00 0.00 0.00 3.02
5190 7301 4.659111 TTCACGAGTTGGTAGTCTTTGA 57.341 40.909 0.00 0.00 0.00 2.69
5191 7302 4.377431 GCATTCACGAGTTGGTAGTCTTTG 60.377 45.833 0.00 0.00 0.00 2.77
5192 7303 3.746492 GCATTCACGAGTTGGTAGTCTTT 59.254 43.478 0.00 0.00 0.00 2.52
5193 7304 3.326747 GCATTCACGAGTTGGTAGTCTT 58.673 45.455 0.00 0.00 0.00 3.01
5194 7305 2.353803 GGCATTCACGAGTTGGTAGTCT 60.354 50.000 0.00 0.00 0.00 3.24
5195 7306 2.000447 GGCATTCACGAGTTGGTAGTC 59.000 52.381 0.00 0.00 0.00 2.59
5196 7307 1.346395 TGGCATTCACGAGTTGGTAGT 59.654 47.619 0.00 0.00 0.00 2.73
5197 7308 2.093306 TGGCATTCACGAGTTGGTAG 57.907 50.000 0.00 0.00 0.00 3.18
5198 7309 2.779755 ATGGCATTCACGAGTTGGTA 57.220 45.000 0.00 0.00 0.00 3.25
5199 7310 2.779755 TATGGCATTCACGAGTTGGT 57.220 45.000 4.78 0.00 0.00 3.67
5200 7311 4.319766 GCTAATATGGCATTCACGAGTTGG 60.320 45.833 4.78 0.00 0.00 3.77
5201 7312 4.273235 TGCTAATATGGCATTCACGAGTTG 59.727 41.667 4.78 0.00 34.56 3.16
5202 7313 4.450976 TGCTAATATGGCATTCACGAGTT 58.549 39.130 4.78 0.00 34.56 3.01
5203 7314 4.060900 CTGCTAATATGGCATTCACGAGT 58.939 43.478 4.78 0.00 39.07 4.18
5204 7315 4.060900 ACTGCTAATATGGCATTCACGAG 58.939 43.478 4.78 0.00 39.07 4.18
5205 7316 4.071961 ACTGCTAATATGGCATTCACGA 57.928 40.909 4.78 0.00 39.07 4.35
5206 7317 4.818534 AACTGCTAATATGGCATTCACG 57.181 40.909 4.78 0.00 39.07 4.35
5207 7318 8.103948 AGAATAACTGCTAATATGGCATTCAC 57.896 34.615 4.78 0.00 39.07 3.18
5208 7319 7.391554 GGAGAATAACTGCTAATATGGCATTCA 59.608 37.037 4.78 0.00 39.07 2.57
5209 7320 7.609532 AGGAGAATAACTGCTAATATGGCATTC 59.390 37.037 4.78 5.80 45.22 2.67
5210 7321 7.465116 AGGAGAATAACTGCTAATATGGCATT 58.535 34.615 4.78 0.00 45.22 3.56
5211 7322 7.025520 AGGAGAATAACTGCTAATATGGCAT 57.974 36.000 4.88 4.88 45.22 4.40
5212 7323 6.043127 TGAGGAGAATAACTGCTAATATGGCA 59.957 38.462 0.00 0.00 46.95 4.92
5213 7324 6.467677 TGAGGAGAATAACTGCTAATATGGC 58.532 40.000 0.00 0.00 46.95 4.40
5214 7325 7.901029 TCTGAGGAGAATAACTGCTAATATGG 58.099 38.462 0.00 0.00 46.95 2.74
5215 7326 8.801299 TCTCTGAGGAGAATAACTGCTAATATG 58.199 37.037 4.59 0.00 46.95 1.78
5216 7327 8.948401 TCTCTGAGGAGAATAACTGCTAATAT 57.052 34.615 4.59 0.00 46.95 1.28
5217 7328 8.221251 TCTCTCTGAGGAGAATAACTGCTAATA 58.779 37.037 4.59 0.00 46.95 0.98
5218 7329 7.066142 TCTCTCTGAGGAGAATAACTGCTAAT 58.934 38.462 4.59 0.00 46.95 1.73
5219 7330 6.427441 TCTCTCTGAGGAGAATAACTGCTAA 58.573 40.000 4.59 0.00 46.95 3.09
5220 7331 6.007485 TCTCTCTGAGGAGAATAACTGCTA 57.993 41.667 4.59 0.00 46.95 3.49
5222 7333 5.301551 TGATCTCTCTGAGGAGAATAACTGC 59.698 44.000 4.59 0.00 46.50 4.40
5223 7334 6.957920 TGATCTCTCTGAGGAGAATAACTG 57.042 41.667 4.59 0.00 46.50 3.16
5224 7335 6.550854 CCTTGATCTCTCTGAGGAGAATAACT 59.449 42.308 4.59 0.00 46.50 2.24
5225 7336 6.549364 TCCTTGATCTCTCTGAGGAGAATAAC 59.451 42.308 4.59 2.50 46.50 1.89
5226 7337 6.677552 TCCTTGATCTCTCTGAGGAGAATAA 58.322 40.000 4.59 5.83 46.50 1.40
5227 7338 6.272953 TCCTTGATCTCTCTGAGGAGAATA 57.727 41.667 4.59 0.00 46.50 1.75
5228 7339 5.141455 TCCTTGATCTCTCTGAGGAGAAT 57.859 43.478 4.59 0.00 46.50 2.40
5229 7340 4.599720 TCCTTGATCTCTCTGAGGAGAA 57.400 45.455 4.59 0.00 46.50 2.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.