Multiple sequence alignment - TraesCS1B01G387400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G387400 chr1B 100.000 7724 0 0 1 7724 621630202 621637925 0.000000e+00 14264.0
1 TraesCS1B01G387400 chr1D 97.655 6867 108 22 1 6860 451874902 451881722 0.000000e+00 11740.0
2 TraesCS1B01G387400 chr1D 95.276 381 16 2 6871 7251 451881907 451882285 3.080000e-168 603.0
3 TraesCS1B01G387400 chr1A 97.850 5441 101 10 1423 6857 546322887 546328317 0.000000e+00 9385.0
4 TraesCS1B01G387400 chr1A 96.723 1373 39 2 68 1440 546321369 546322735 0.000000e+00 2281.0
5 TraesCS1B01G387400 chr1A 88.020 409 24 14 6867 7251 546328498 546328905 1.960000e-125 460.0
6 TraesCS1B01G387400 chr4D 90.704 398 35 2 7329 7724 62712293 62712690 5.310000e-146 529.0
7 TraesCS1B01G387400 chr5D 80.315 127 25 0 7598 7724 409286118 409285992 6.380000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G387400 chr1B 621630202 621637925 7723 False 14264.0 14264 100.000000 1 7724 1 chr1B.!!$F1 7723
1 TraesCS1B01G387400 chr1D 451874902 451882285 7383 False 6171.5 11740 96.465500 1 7251 2 chr1D.!!$F1 7250
2 TraesCS1B01G387400 chr1A 546321369 546328905 7536 False 4042.0 9385 94.197667 68 7251 3 chr1A.!!$F1 7183

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
350 354 0.106769 TTGCAGGACAAAGACAGCCA 60.107 50.0 0.00 0.00 34.56 4.75 F
979 983 0.815734 ATAGACACACGGCGCTAGTT 59.184 50.0 6.90 0.00 0.00 2.24 F
1609 1781 0.373716 GTATCTTCGCGTGGCCTTTG 59.626 55.0 5.77 0.00 0.00 2.77 F
2881 3056 1.987080 AGGAAGGGGCTATTCAAGGT 58.013 50.0 4.97 0.00 0.00 3.50 F
3702 3877 1.164411 ACGCGGCAAGATTCATTGAA 58.836 45.0 12.47 0.75 31.55 2.69 F
4991 5166 1.229428 TTGCAGACTGGAAGCTTTCG 58.771 50.0 5.14 0.00 37.60 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1247 1251 2.190578 CTCGGGGAAGGATGGTGC 59.809 66.667 0.00 0.00 0.0 5.01 R
2881 3056 1.765904 GAAAGGAAACCCAGGCCAAAA 59.234 47.619 5.01 0.00 0.0 2.44 R
3543 3718 3.645212 TCCCTCTCATCCATTCTAGCTTG 59.355 47.826 0.00 0.00 0.0 4.01 R
3911 4086 0.647410 CCAATGCACTAGTCGCTTCG 59.353 55.000 15.28 2.86 0.0 3.79 R
5350 5528 1.069636 GCCACTTGACTTGCTTCTTCG 60.070 52.381 0.00 0.00 0.0 3.79 R
6884 7246 0.179000 ACCACCATCTCCTGCGAATC 59.821 55.000 0.00 0.00 0.0 2.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 2.113774 CCACTGCCAGGCAAGACA 59.886 61.111 17.03 0.00 38.41 3.41
47 48 1.818785 CTGCTAAGCTCCTGCCAGC 60.819 63.158 0.00 0.00 43.74 4.85
48 49 2.515757 GCTAAGCTCCTGCCAGCC 60.516 66.667 0.00 0.00 40.65 4.85
230 234 3.548014 CGCATTAAAATTACCGGCAGAGG 60.548 47.826 0.00 0.00 37.30 3.69
270 274 3.497942 GCTGTCAAGGAAGAGGGGTTTTA 60.498 47.826 0.00 0.00 0.00 1.52
271 275 4.811063 GCTGTCAAGGAAGAGGGGTTTTAT 60.811 45.833 0.00 0.00 0.00 1.40
331 335 5.128499 TCACAATGTTGAATCAGTTTGGGTT 59.872 36.000 0.00 0.00 0.00 4.11
350 354 0.106769 TTGCAGGACAAAGACAGCCA 60.107 50.000 0.00 0.00 34.56 4.75
370 374 4.277476 CCATTAATTAAGGGTGCACTCCA 58.723 43.478 18.68 0.00 32.77 3.86
400 404 2.556286 GGCACTTTCTACTGGTGGC 58.444 57.895 0.00 0.00 46.00 5.01
424 428 1.673626 GGCACTGAAACGGATCGGTAA 60.674 52.381 6.32 0.00 36.80 2.85
577 581 8.563732 AGAGAAAAACTTGAGAAGCAATAGAAC 58.436 33.333 0.00 0.00 35.59 3.01
767 771 6.659668 AGCGAATAGGATATGTAGCTCTTGTA 59.340 38.462 0.00 0.00 0.00 2.41
769 773 7.148222 GCGAATAGGATATGTAGCTCTTGTAGA 60.148 40.741 0.00 0.00 0.00 2.59
775 779 7.013846 AGGATATGTAGCTCTTGTAGACAGTTC 59.986 40.741 0.00 0.00 0.00 3.01
904 908 3.674997 TCTTGTGAATGGACTTACCTGC 58.325 45.455 0.00 0.00 39.86 4.85
979 983 0.815734 ATAGACACACGGCGCTAGTT 59.184 50.000 6.90 0.00 0.00 2.24
1129 1133 3.793775 TTCAAGAACGCGGACGCCA 62.794 57.895 12.47 0.00 45.53 5.69
1158 1162 2.270257 GCTGATGCTGGTTGGCACA 61.270 57.895 0.00 0.00 45.36 4.57
1266 1270 1.991230 CACCATCCTTCCCCGAGTT 59.009 57.895 0.00 0.00 0.00 3.01
1332 1336 3.003275 ACGCCACTGAAACTTGTTACATG 59.997 43.478 0.00 0.00 0.00 3.21
1609 1781 0.373716 GTATCTTCGCGTGGCCTTTG 59.626 55.000 5.77 0.00 0.00 2.77
1860 2034 7.971168 CGAGTATGTCTTTGATAGTTCAACTCT 59.029 37.037 0.00 0.00 41.50 3.24
1974 2148 4.199432 ACTCAATATCAGATCGCCCATC 57.801 45.455 0.00 0.00 0.00 3.51
2159 2333 7.486647 ACATGGCATTCTTTGATACAGAAATC 58.513 34.615 0.00 0.00 33.94 2.17
2222 2396 7.283127 ACAATACTAATTCAAGATGCGATTGGT 59.717 33.333 0.00 0.00 0.00 3.67
2486 2661 8.490311 TGTTTTACATTTTCCCATTCCTTTTCT 58.510 29.630 0.00 0.00 0.00 2.52
2800 2975 2.299867 ACAGGTGGTTTCATTCAATGGC 59.700 45.455 0.00 0.00 0.00 4.40
2812 2987 3.724508 TTCAATGGCGAAAAGAAAGCA 57.275 38.095 0.00 0.00 0.00 3.91
2881 3056 1.987080 AGGAAGGGGCTATTCAAGGT 58.013 50.000 4.97 0.00 0.00 3.50
3170 3345 8.986477 AAATATGTGTCCTAACTTTGCAAATC 57.014 30.769 13.23 0.00 0.00 2.17
3537 3712 6.150809 TGTTGATCGATGGAATGAACATCAAA 59.849 34.615 0.54 0.00 43.75 2.69
3543 3718 7.083858 TCGATGGAATGAACATCAAAAGTTTC 58.916 34.615 6.28 0.00 43.75 2.78
3702 3877 1.164411 ACGCGGCAAGATTCATTGAA 58.836 45.000 12.47 0.75 31.55 2.69
3911 4086 2.482721 TCCGAAAATCCTTTTGCTCGAC 59.517 45.455 0.00 0.00 30.28 4.20
4208 4383 5.221263 GGAGCATACTCTCAACTTATTCGGA 60.221 44.000 0.00 0.00 42.98 4.55
4264 4439 1.901591 ATGCTGGATTATCAAGCCCG 58.098 50.000 17.96 0.00 35.65 6.13
4294 4469 9.985730 TCTAAAAGAAATCAAGCACAATCAATT 57.014 25.926 0.00 0.00 0.00 2.32
4408 4583 1.873591 GGTGAGAAAGCAAGCGAGAAA 59.126 47.619 0.00 0.00 0.00 2.52
4714 4889 4.515432 GGAAACTTATAGAACGCATTCGC 58.485 43.478 0.00 0.00 40.04 4.70
4991 5166 1.229428 TTGCAGACTGGAAGCTTTCG 58.771 50.000 5.14 0.00 37.60 3.46
5070 5245 5.866207 AGTTCCTACAAGGGTTTAGTCAAG 58.134 41.667 0.00 0.00 35.59 3.02
5276 5454 7.333528 TGTCAACAGTGCTTTCTTTCTTATT 57.666 32.000 0.00 0.00 0.00 1.40
5350 5528 8.887036 TGAATATGTGATAACAGACCATGTAC 57.113 34.615 0.00 0.00 43.00 2.90
5377 5555 1.268743 GCAAGTCAAGTGGCAACTGAC 60.269 52.381 18.01 18.01 36.51 3.51
5545 5723 4.134563 TGCTATATGTCACGTCTGCTCTA 58.865 43.478 0.00 0.00 0.00 2.43
5563 5741 4.209288 GCTCTATGTTACTATGTTGGTGCG 59.791 45.833 0.00 0.00 0.00 5.34
5931 6109 6.017605 GTCCAGATGTTCAAATATTCAGCGAT 60.018 38.462 0.00 0.00 0.00 4.58
6029 6208 9.620259 ATTCTGAGAGGGTTCAATTTACTATTC 57.380 33.333 0.00 0.00 0.00 1.75
6204 6383 6.515832 AGTGGAAATCAAAAACCTAAAGCTG 58.484 36.000 0.00 0.00 0.00 4.24
6324 6503 0.107993 CCGAGGAAGAGATTGCTGCA 60.108 55.000 0.00 0.00 0.00 4.41
6380 6559 1.304052 GCATGCCACAGGGGTACAA 60.304 57.895 6.36 0.00 39.65 2.41
6521 6700 0.871163 GATGCAGAGTCAGAGAGCGC 60.871 60.000 0.00 0.00 0.00 5.92
6726 6905 3.495331 TCGCCCCAATGCAACATAATAT 58.505 40.909 0.00 0.00 0.00 1.28
6727 6906 3.255395 TCGCCCCAATGCAACATAATATG 59.745 43.478 0.00 0.00 0.00 1.78
6758 6939 3.313526 ACAATGCATCGATTTGAGCTACC 59.686 43.478 13.80 0.00 0.00 3.18
6775 6956 6.037940 TGAGCTACCGAATTGTACTAGTACTG 59.962 42.308 28.56 15.28 37.00 2.74
6860 7042 9.638300 GCGCTTATCGAAATATATAAGAAATGG 57.362 33.333 0.00 0.00 41.67 3.16
7002 7370 0.737715 ACCGAACGAATCTGCTCTGC 60.738 55.000 0.00 0.00 0.00 4.26
7008 7377 4.845580 AATCTGCTCTGCCGGCGG 62.846 66.667 30.18 30.18 37.41 6.13
7191 7578 1.539124 AGGGGAGGGATATTCGGCC 60.539 63.158 0.00 0.00 0.00 6.13
7221 7608 0.983378 GATGGGCTGGACTAGGTGGT 60.983 60.000 0.00 0.00 0.00 4.16
7226 7613 1.282157 GGCTGGACTAGGTGGTGAAAT 59.718 52.381 0.00 0.00 0.00 2.17
7230 7617 2.983192 TGGACTAGGTGGTGAAATGGAA 59.017 45.455 0.00 0.00 0.00 3.53
7232 7619 3.610911 GACTAGGTGGTGAAATGGAAGG 58.389 50.000 0.00 0.00 0.00 3.46
7234 7621 0.251787 AGGTGGTGAAATGGAAGGGC 60.252 55.000 0.00 0.00 0.00 5.19
7251 7638 3.043419 CTCGGCCCATCTAGACCG 58.957 66.667 12.15 12.15 46.97 4.79
7252 7639 2.520982 TCGGCCCATCTAGACCGG 60.521 66.667 16.82 0.00 45.65 5.28
7253 7640 3.616721 CGGCCCATCTAGACCGGG 61.617 72.222 20.55 20.55 41.95 5.73
7254 7641 3.242291 GGCCCATCTAGACCGGGG 61.242 72.222 24.26 21.04 43.72 5.73
7256 7643 3.616721 CCCATCTAGACCGGGGCG 61.617 72.222 18.04 0.00 36.21 6.13
7266 7653 2.492560 CCGGGGCGGTTTATTTGC 59.507 61.111 0.00 0.00 42.73 3.68
7273 7660 3.322526 CGGTTTATTTGCCGCTTCC 57.677 52.632 0.00 0.00 41.53 3.46
7274 7661 0.808755 CGGTTTATTTGCCGCTTCCT 59.191 50.000 0.00 0.00 41.53 3.36
7275 7662 2.011222 CGGTTTATTTGCCGCTTCCTA 58.989 47.619 0.00 0.00 41.53 2.94
7276 7663 2.616842 CGGTTTATTTGCCGCTTCCTAT 59.383 45.455 0.00 0.00 41.53 2.57
7277 7664 3.066203 CGGTTTATTTGCCGCTTCCTATT 59.934 43.478 0.00 0.00 41.53 1.73
7278 7665 4.439563 CGGTTTATTTGCCGCTTCCTATTT 60.440 41.667 0.00 0.00 41.53 1.40
7279 7666 5.041287 GGTTTATTTGCCGCTTCCTATTTC 58.959 41.667 0.00 0.00 0.00 2.17
7280 7667 4.545823 TTATTTGCCGCTTCCTATTTCG 57.454 40.909 0.00 0.00 0.00 3.46
7281 7668 0.450184 TTTGCCGCTTCCTATTTCGC 59.550 50.000 0.00 0.00 0.00 4.70
7282 7669 1.701545 TTGCCGCTTCCTATTTCGCG 61.702 55.000 0.00 0.00 44.69 5.87
7283 7670 2.171725 GCCGCTTCCTATTTCGCGT 61.172 57.895 5.77 0.00 43.70 6.01
7284 7671 1.702491 GCCGCTTCCTATTTCGCGTT 61.702 55.000 5.77 0.00 43.70 4.84
7285 7672 0.725117 CCGCTTCCTATTTCGCGTTT 59.275 50.000 5.77 0.00 43.70 3.60
7286 7673 1.928503 CCGCTTCCTATTTCGCGTTTA 59.071 47.619 5.77 0.00 43.70 2.01
7287 7674 2.349275 CCGCTTCCTATTTCGCGTTTAA 59.651 45.455 5.77 0.00 43.70 1.52
7288 7675 3.543460 CCGCTTCCTATTTCGCGTTTAAG 60.543 47.826 5.77 0.00 43.70 1.85
7289 7676 3.543460 CGCTTCCTATTTCGCGTTTAAGG 60.543 47.826 5.77 9.89 40.64 2.69
7290 7677 3.787805 GCTTCCTATTTCGCGTTTAAGGC 60.788 47.826 5.77 0.00 0.00 4.35
7291 7678 2.975266 TCCTATTTCGCGTTTAAGGCA 58.025 42.857 5.77 0.00 0.00 4.75
7292 7679 3.537580 TCCTATTTCGCGTTTAAGGCAT 58.462 40.909 5.77 0.00 0.00 4.40
7293 7680 3.558418 TCCTATTTCGCGTTTAAGGCATC 59.442 43.478 5.77 0.00 0.00 3.91
7294 7681 3.311322 CCTATTTCGCGTTTAAGGCATCA 59.689 43.478 5.77 0.00 0.00 3.07
7295 7682 3.840890 ATTTCGCGTTTAAGGCATCAA 57.159 38.095 5.77 0.00 0.00 2.57
7296 7683 3.627732 TTTCGCGTTTAAGGCATCAAA 57.372 38.095 5.77 3.05 0.00 2.69
7297 7684 3.840890 TTCGCGTTTAAGGCATCAAAT 57.159 38.095 5.77 0.00 0.00 2.32
7298 7685 4.948608 TTCGCGTTTAAGGCATCAAATA 57.051 36.364 5.77 0.00 0.00 1.40
7299 7686 4.267357 TCGCGTTTAAGGCATCAAATAC 57.733 40.909 5.77 0.00 0.00 1.89
7300 7687 3.685272 TCGCGTTTAAGGCATCAAATACA 59.315 39.130 5.77 0.00 0.00 2.29
7301 7688 4.028383 CGCGTTTAAGGCATCAAATACAG 58.972 43.478 10.25 0.00 0.00 2.74
7302 7689 3.791353 GCGTTTAAGGCATCAAATACAGC 59.209 43.478 4.67 0.00 0.00 4.40
7303 7690 4.028383 CGTTTAAGGCATCAAATACAGCG 58.972 43.478 0.00 0.00 0.00 5.18
7304 7691 4.351192 GTTTAAGGCATCAAATACAGCGG 58.649 43.478 0.00 0.00 0.00 5.52
7305 7692 1.392589 AAGGCATCAAATACAGCGGG 58.607 50.000 0.00 0.00 0.00 6.13
7306 7693 1.103398 AGGCATCAAATACAGCGGGC 61.103 55.000 0.00 0.00 0.00 6.13
7307 7694 1.383456 GGCATCAAATACAGCGGGCA 61.383 55.000 0.00 0.00 0.00 5.36
7308 7695 0.455410 GCATCAAATACAGCGGGCAA 59.545 50.000 0.00 0.00 0.00 4.52
7309 7696 1.798813 GCATCAAATACAGCGGGCAAC 60.799 52.381 0.00 0.00 0.00 4.17
7310 7697 1.745087 CATCAAATACAGCGGGCAACT 59.255 47.619 0.00 0.00 0.00 3.16
7311 7698 2.772077 TCAAATACAGCGGGCAACTA 57.228 45.000 0.00 0.00 0.00 2.24
7312 7699 3.060736 TCAAATACAGCGGGCAACTAA 57.939 42.857 0.00 0.00 0.00 2.24
7313 7700 3.616219 TCAAATACAGCGGGCAACTAAT 58.384 40.909 0.00 0.00 0.00 1.73
7314 7701 4.013728 TCAAATACAGCGGGCAACTAATT 58.986 39.130 0.00 0.00 0.00 1.40
7315 7702 5.186942 TCAAATACAGCGGGCAACTAATTA 58.813 37.500 0.00 0.00 0.00 1.40
7316 7703 5.648526 TCAAATACAGCGGGCAACTAATTAA 59.351 36.000 0.00 0.00 0.00 1.40
7317 7704 5.751243 AATACAGCGGGCAACTAATTAAG 57.249 39.130 0.00 0.00 0.00 1.85
7318 7705 2.365582 ACAGCGGGCAACTAATTAAGG 58.634 47.619 0.00 0.00 0.00 2.69
7319 7706 2.026636 ACAGCGGGCAACTAATTAAGGA 60.027 45.455 0.00 0.00 0.00 3.36
7320 7707 2.614057 CAGCGGGCAACTAATTAAGGAG 59.386 50.000 0.00 0.00 0.00 3.69
7321 7708 2.238898 AGCGGGCAACTAATTAAGGAGT 59.761 45.455 0.00 0.00 0.00 3.85
7322 7709 2.354821 GCGGGCAACTAATTAAGGAGTG 59.645 50.000 0.00 0.00 0.00 3.51
7323 7710 2.354821 CGGGCAACTAATTAAGGAGTGC 59.645 50.000 0.00 0.00 33.28 4.40
7324 7711 2.354821 GGGCAACTAATTAAGGAGTGCG 59.645 50.000 0.00 0.00 34.27 5.34
7325 7712 2.354821 GGCAACTAATTAAGGAGTGCGG 59.645 50.000 0.00 0.00 34.27 5.69
7326 7713 2.354821 GCAACTAATTAAGGAGTGCGGG 59.645 50.000 0.00 0.00 0.00 6.13
7327 7714 3.606687 CAACTAATTAAGGAGTGCGGGT 58.393 45.455 0.00 0.00 0.00 5.28
7328 7715 3.994931 ACTAATTAAGGAGTGCGGGTT 57.005 42.857 0.00 0.00 0.00 4.11
7329 7716 3.870274 ACTAATTAAGGAGTGCGGGTTC 58.130 45.455 0.00 0.00 0.00 3.62
7330 7717 2.124277 AATTAAGGAGTGCGGGTTCC 57.876 50.000 0.00 0.00 0.00 3.62
7331 7718 0.255033 ATTAAGGAGTGCGGGTTCCC 59.745 55.000 0.00 0.00 33.83 3.97
7332 7719 1.844544 TTAAGGAGTGCGGGTTCCCC 61.845 60.000 1.93 0.00 41.09 4.81
7333 7720 2.758852 TAAGGAGTGCGGGTTCCCCT 62.759 60.000 1.93 0.00 42.67 4.79
7334 7721 4.097361 GGAGTGCGGGTTCCCCTC 62.097 72.222 1.93 3.56 42.67 4.30
7335 7722 3.003763 GAGTGCGGGTTCCCCTCT 61.004 66.667 1.93 2.17 42.67 3.69
7336 7723 3.003763 AGTGCGGGTTCCCCTCTC 61.004 66.667 1.93 0.00 42.67 3.20
7337 7724 4.452733 GTGCGGGTTCCCCTCTCG 62.453 72.222 1.93 0.00 42.67 4.04
7339 7726 3.703127 GCGGGTTCCCCTCTCGTT 61.703 66.667 1.93 0.00 42.67 3.85
7340 7727 2.353610 GCGGGTTCCCCTCTCGTTA 61.354 63.158 1.93 0.00 42.67 3.18
7341 7728 1.814527 CGGGTTCCCCTCTCGTTAG 59.185 63.158 1.93 0.00 42.67 2.34
7342 7729 1.673808 CGGGTTCCCCTCTCGTTAGG 61.674 65.000 1.93 0.00 42.67 2.69
7353 7740 4.439968 CCTCTCGTTAGGGTTTATGTTCC 58.560 47.826 0.00 0.00 32.55 3.62
7354 7741 4.161754 CCTCTCGTTAGGGTTTATGTTCCT 59.838 45.833 0.00 0.00 32.55 3.36
7355 7742 5.334724 TCTCGTTAGGGTTTATGTTCCTC 57.665 43.478 0.00 0.00 32.46 3.71
7356 7743 5.021458 TCTCGTTAGGGTTTATGTTCCTCT 58.979 41.667 0.00 0.00 32.46 3.69
7357 7744 5.126707 TCTCGTTAGGGTTTATGTTCCTCTC 59.873 44.000 0.00 0.00 32.46 3.20
7358 7745 4.110482 CGTTAGGGTTTATGTTCCTCTCG 58.890 47.826 0.00 0.00 32.46 4.04
7359 7746 4.381292 CGTTAGGGTTTATGTTCCTCTCGT 60.381 45.833 0.00 0.00 32.46 4.18
7360 7747 3.889520 AGGGTTTATGTTCCTCTCGTC 57.110 47.619 0.00 0.00 0.00 4.20
7361 7748 2.165845 AGGGTTTATGTTCCTCTCGTCG 59.834 50.000 0.00 0.00 0.00 5.12
7362 7749 1.925185 GGTTTATGTTCCTCTCGTCGC 59.075 52.381 0.00 0.00 0.00 5.19
7363 7750 1.925185 GTTTATGTTCCTCTCGTCGCC 59.075 52.381 0.00 0.00 0.00 5.54
7364 7751 0.099968 TTATGTTCCTCTCGTCGCCG 59.900 55.000 0.00 0.00 0.00 6.46
7365 7752 2.332362 TATGTTCCTCTCGTCGCCGC 62.332 60.000 0.00 0.00 0.00 6.53
7382 7769 2.668212 CCGGCGCTGTGGAGAAAA 60.668 61.111 16.49 0.00 0.00 2.29
7383 7770 2.040544 CCGGCGCTGTGGAGAAAAT 61.041 57.895 16.49 0.00 0.00 1.82
7384 7771 1.425428 CGGCGCTGTGGAGAAAATC 59.575 57.895 8.45 0.00 0.00 2.17
7385 7772 1.021390 CGGCGCTGTGGAGAAAATCT 61.021 55.000 8.45 0.00 0.00 2.40
7386 7773 1.168714 GGCGCTGTGGAGAAAATCTT 58.831 50.000 7.64 0.00 0.00 2.40
7387 7774 1.131315 GGCGCTGTGGAGAAAATCTTC 59.869 52.381 7.64 0.00 0.00 2.87
7388 7775 1.131315 GCGCTGTGGAGAAAATCTTCC 59.869 52.381 0.00 0.00 31.28 3.46
7389 7776 2.704572 CGCTGTGGAGAAAATCTTCCT 58.295 47.619 0.00 0.00 31.28 3.36
7390 7777 3.077359 CGCTGTGGAGAAAATCTTCCTT 58.923 45.455 0.00 0.00 31.28 3.36
7391 7778 3.126000 CGCTGTGGAGAAAATCTTCCTTC 59.874 47.826 0.00 0.00 31.28 3.46
7392 7779 3.441922 GCTGTGGAGAAAATCTTCCTTCC 59.558 47.826 0.00 0.00 31.28 3.46
7393 7780 4.013050 CTGTGGAGAAAATCTTCCTTCCC 58.987 47.826 0.00 0.00 28.86 3.97
7394 7781 3.657727 TGTGGAGAAAATCTTCCTTCCCT 59.342 43.478 0.00 0.00 28.86 4.20
7395 7782 4.263506 TGTGGAGAAAATCTTCCTTCCCTC 60.264 45.833 0.00 0.00 28.86 4.30
7396 7783 3.267031 TGGAGAAAATCTTCCTTCCCTCC 59.733 47.826 0.00 0.00 39.38 4.30
7397 7784 3.267031 GGAGAAAATCTTCCTTCCCTCCA 59.733 47.826 0.00 0.00 38.91 3.86
7398 7785 4.079500 GGAGAAAATCTTCCTTCCCTCCAT 60.080 45.833 0.00 0.00 38.91 3.41
7399 7786 5.122707 AGAAAATCTTCCTTCCCTCCATC 57.877 43.478 0.00 0.00 31.28 3.51
7400 7787 3.567478 AAATCTTCCTTCCCTCCATCG 57.433 47.619 0.00 0.00 0.00 3.84
7401 7788 2.182516 ATCTTCCTTCCCTCCATCGT 57.817 50.000 0.00 0.00 0.00 3.73
7402 7789 1.952621 TCTTCCTTCCCTCCATCGTT 58.047 50.000 0.00 0.00 0.00 3.85
7403 7790 1.831736 TCTTCCTTCCCTCCATCGTTC 59.168 52.381 0.00 0.00 0.00 3.95
7404 7791 1.834263 CTTCCTTCCCTCCATCGTTCT 59.166 52.381 0.00 0.00 0.00 3.01
7405 7792 1.486211 TCCTTCCCTCCATCGTTCTC 58.514 55.000 0.00 0.00 0.00 2.87
7406 7793 1.007238 TCCTTCCCTCCATCGTTCTCT 59.993 52.381 0.00 0.00 0.00 3.10
7407 7794 1.137872 CCTTCCCTCCATCGTTCTCTG 59.862 57.143 0.00 0.00 0.00 3.35
7408 7795 1.137872 CTTCCCTCCATCGTTCTCTGG 59.862 57.143 0.00 0.00 0.00 3.86
7409 7796 0.041238 TCCCTCCATCGTTCTCTGGT 59.959 55.000 0.00 0.00 34.03 4.00
7410 7797 0.905357 CCCTCCATCGTTCTCTGGTT 59.095 55.000 0.00 0.00 34.03 3.67
7411 7798 1.134670 CCCTCCATCGTTCTCTGGTTC 60.135 57.143 0.00 0.00 34.03 3.62
7412 7799 1.134670 CCTCCATCGTTCTCTGGTTCC 60.135 57.143 0.00 0.00 34.03 3.62
7413 7800 1.827969 CTCCATCGTTCTCTGGTTCCT 59.172 52.381 0.00 0.00 34.03 3.36
7414 7801 2.234908 CTCCATCGTTCTCTGGTTCCTT 59.765 50.000 0.00 0.00 34.03 3.36
7415 7802 2.637872 TCCATCGTTCTCTGGTTCCTTT 59.362 45.455 0.00 0.00 34.03 3.11
7416 7803 2.744202 CCATCGTTCTCTGGTTCCTTTG 59.256 50.000 0.00 0.00 0.00 2.77
7417 7804 2.543777 TCGTTCTCTGGTTCCTTTGG 57.456 50.000 0.00 0.00 0.00 3.28
7418 7805 0.875059 CGTTCTCTGGTTCCTTTGGC 59.125 55.000 0.00 0.00 0.00 4.52
7419 7806 1.543429 CGTTCTCTGGTTCCTTTGGCT 60.543 52.381 0.00 0.00 0.00 4.75
7420 7807 1.882623 GTTCTCTGGTTCCTTTGGCTG 59.117 52.381 0.00 0.00 0.00 4.85
7421 7808 0.401738 TCTCTGGTTCCTTTGGCTGG 59.598 55.000 0.00 0.00 0.00 4.85
7422 7809 0.610232 CTCTGGTTCCTTTGGCTGGG 60.610 60.000 0.00 0.00 0.00 4.45
7423 7810 1.065410 TCTGGTTCCTTTGGCTGGGA 61.065 55.000 0.00 0.00 0.00 4.37
7424 7811 0.895559 CTGGTTCCTTTGGCTGGGAC 60.896 60.000 0.00 0.00 32.34 4.46
7425 7812 1.971695 GGTTCCTTTGGCTGGGACG 60.972 63.158 0.00 0.00 33.91 4.79
7426 7813 1.971695 GTTCCTTTGGCTGGGACGG 60.972 63.158 0.00 0.00 38.10 4.79
7427 7814 2.150719 TTCCTTTGGCTGGGACGGA 61.151 57.895 0.00 0.00 36.31 4.69
7428 7815 1.497309 TTCCTTTGGCTGGGACGGAT 61.497 55.000 0.00 0.00 36.31 4.18
7429 7816 1.452108 CCTTTGGCTGGGACGGATC 60.452 63.158 0.00 0.00 36.31 3.36
7430 7817 1.452108 CTTTGGCTGGGACGGATCC 60.452 63.158 0.00 0.00 45.42 3.36
7434 7821 2.190578 GCTGGGACGGATCCAAGG 59.809 66.667 13.41 0.00 45.54 3.61
7435 7822 3.406595 GCTGGGACGGATCCAAGGG 62.407 68.421 13.41 0.00 45.54 3.95
7439 7826 1.446366 GGACGGATCCAAGGGTAGC 59.554 63.158 13.41 0.00 45.47 3.58
7440 7827 1.049289 GGACGGATCCAAGGGTAGCT 61.049 60.000 13.41 0.00 45.47 3.32
7441 7828 0.389757 GACGGATCCAAGGGTAGCTC 59.610 60.000 13.41 0.00 0.00 4.09
7442 7829 1.364171 CGGATCCAAGGGTAGCTCG 59.636 63.158 13.41 0.00 0.00 5.03
7443 7830 1.392710 CGGATCCAAGGGTAGCTCGT 61.393 60.000 13.41 0.00 0.00 4.18
7444 7831 0.105039 GGATCCAAGGGTAGCTCGTG 59.895 60.000 6.95 0.00 0.00 4.35
7445 7832 0.530870 GATCCAAGGGTAGCTCGTGC 60.531 60.000 0.07 0.07 40.05 5.34
7455 7842 4.208686 GCTCGTGCTACTCCCCGG 62.209 72.222 1.41 0.00 36.03 5.73
7456 7843 4.208686 CTCGTGCTACTCCCCGGC 62.209 72.222 0.00 0.00 0.00 6.13
7462 7849 3.155167 CTACTCCCCGGCCCTGAC 61.155 72.222 0.00 0.00 0.00 3.51
7463 7850 3.680196 TACTCCCCGGCCCTGACT 61.680 66.667 0.00 0.00 0.00 3.41
7464 7851 2.294170 CTACTCCCCGGCCCTGACTA 62.294 65.000 0.00 0.00 0.00 2.59
7465 7852 2.294170 TACTCCCCGGCCCTGACTAG 62.294 65.000 0.00 0.00 0.00 2.57
7466 7853 4.475444 TCCCCGGCCCTGACTAGG 62.475 72.222 0.00 0.00 44.18 3.02
7467 7854 4.798682 CCCCGGCCCTGACTAGGT 62.799 72.222 0.00 0.00 42.96 3.08
7468 7855 2.687566 CCCGGCCCTGACTAGGTT 60.688 66.667 0.00 0.00 42.96 3.50
7469 7856 2.298661 CCCGGCCCTGACTAGGTTT 61.299 63.158 0.00 0.00 42.96 3.27
7470 7857 1.221021 CCGGCCCTGACTAGGTTTC 59.779 63.158 0.00 0.00 42.96 2.78
7471 7858 1.550130 CCGGCCCTGACTAGGTTTCA 61.550 60.000 0.00 0.00 42.96 2.69
7472 7859 0.108138 CGGCCCTGACTAGGTTTCAG 60.108 60.000 0.00 0.00 42.96 3.02
7473 7860 1.276622 GGCCCTGACTAGGTTTCAGA 58.723 55.000 9.78 0.00 42.81 3.27
7474 7861 1.840635 GGCCCTGACTAGGTTTCAGAT 59.159 52.381 9.78 0.00 42.81 2.90
7475 7862 2.239907 GGCCCTGACTAGGTTTCAGATT 59.760 50.000 9.78 0.00 42.81 2.40
7476 7863 3.274288 GCCCTGACTAGGTTTCAGATTG 58.726 50.000 9.78 1.33 42.81 2.67
7477 7864 3.307762 GCCCTGACTAGGTTTCAGATTGT 60.308 47.826 9.78 0.00 42.81 2.71
7478 7865 4.256920 CCCTGACTAGGTTTCAGATTGTG 58.743 47.826 9.78 0.00 42.81 3.33
7479 7866 4.256920 CCTGACTAGGTTTCAGATTGTGG 58.743 47.826 9.78 0.00 42.81 4.17
7480 7867 4.256920 CTGACTAGGTTTCAGATTGTGGG 58.743 47.826 3.31 0.00 42.81 4.61
7481 7868 3.009033 TGACTAGGTTTCAGATTGTGGGG 59.991 47.826 0.00 0.00 0.00 4.96
7482 7869 2.308866 ACTAGGTTTCAGATTGTGGGGG 59.691 50.000 0.00 0.00 0.00 5.40
7483 7870 1.158007 AGGTTTCAGATTGTGGGGGT 58.842 50.000 0.00 0.00 0.00 4.95
7484 7871 1.503347 AGGTTTCAGATTGTGGGGGTT 59.497 47.619 0.00 0.00 0.00 4.11
7485 7872 2.090775 AGGTTTCAGATTGTGGGGGTTT 60.091 45.455 0.00 0.00 0.00 3.27
7486 7873 2.703536 GGTTTCAGATTGTGGGGGTTTT 59.296 45.455 0.00 0.00 0.00 2.43
7487 7874 3.244078 GGTTTCAGATTGTGGGGGTTTTC 60.244 47.826 0.00 0.00 0.00 2.29
7488 7875 3.611025 TTCAGATTGTGGGGGTTTTCT 57.389 42.857 0.00 0.00 0.00 2.52
7489 7876 4.733077 TTCAGATTGTGGGGGTTTTCTA 57.267 40.909 0.00 0.00 0.00 2.10
7490 7877 4.301072 TCAGATTGTGGGGGTTTTCTAG 57.699 45.455 0.00 0.00 0.00 2.43
7491 7878 3.010138 TCAGATTGTGGGGGTTTTCTAGG 59.990 47.826 0.00 0.00 0.00 3.02
7492 7879 2.311841 AGATTGTGGGGGTTTTCTAGGG 59.688 50.000 0.00 0.00 0.00 3.53
7493 7880 1.536644 TTGTGGGGGTTTTCTAGGGT 58.463 50.000 0.00 0.00 0.00 4.34
7494 7881 1.536644 TGTGGGGGTTTTCTAGGGTT 58.463 50.000 0.00 0.00 0.00 4.11
7495 7882 1.860906 TGTGGGGGTTTTCTAGGGTTT 59.139 47.619 0.00 0.00 0.00 3.27
7496 7883 2.158430 TGTGGGGGTTTTCTAGGGTTTC 60.158 50.000 0.00 0.00 0.00 2.78
7497 7884 1.430075 TGGGGGTTTTCTAGGGTTTCC 59.570 52.381 0.00 0.00 0.00 3.13
7498 7885 1.714787 GGGGGTTTTCTAGGGTTTCCT 59.285 52.381 0.00 0.00 46.96 3.36
7499 7886 2.291411 GGGGGTTTTCTAGGGTTTCCTC 60.291 54.545 0.00 0.00 43.66 3.71
7500 7887 2.617276 GGGGTTTTCTAGGGTTTCCTCG 60.617 54.545 0.00 0.00 43.66 4.63
7501 7888 2.039480 GGGTTTTCTAGGGTTTCCTCGT 59.961 50.000 0.00 0.00 43.66 4.18
7502 7889 3.497405 GGGTTTTCTAGGGTTTCCTCGTT 60.497 47.826 0.00 0.00 43.66 3.85
7503 7890 3.750130 GGTTTTCTAGGGTTTCCTCGTTC 59.250 47.826 0.00 0.00 43.66 3.95
7504 7891 4.383173 GTTTTCTAGGGTTTCCTCGTTCA 58.617 43.478 0.00 0.00 43.66 3.18
7505 7892 4.693042 TTTCTAGGGTTTCCTCGTTCAA 57.307 40.909 0.00 0.00 43.66 2.69
7506 7893 3.672767 TCTAGGGTTTCCTCGTTCAAC 57.327 47.619 0.00 0.00 43.66 3.18
7507 7894 3.236896 TCTAGGGTTTCCTCGTTCAACT 58.763 45.455 0.00 0.00 43.66 3.16
7508 7895 4.410099 TCTAGGGTTTCCTCGTTCAACTA 58.590 43.478 0.00 0.00 43.66 2.24
7509 7896 3.679824 AGGGTTTCCTCGTTCAACTAG 57.320 47.619 0.00 0.00 39.80 2.57
7510 7897 2.970640 AGGGTTTCCTCGTTCAACTAGT 59.029 45.455 0.00 0.00 39.80 2.57
7511 7898 3.006644 AGGGTTTCCTCGTTCAACTAGTC 59.993 47.826 0.00 0.00 39.80 2.59
7512 7899 3.324117 GGTTTCCTCGTTCAACTAGTCC 58.676 50.000 0.00 0.00 0.00 3.85
7513 7900 3.006644 GGTTTCCTCGTTCAACTAGTCCT 59.993 47.826 0.00 0.00 0.00 3.85
7514 7901 4.236147 GTTTCCTCGTTCAACTAGTCCTC 58.764 47.826 0.00 0.00 0.00 3.71
7515 7902 3.436577 TCCTCGTTCAACTAGTCCTCT 57.563 47.619 0.00 0.00 0.00 3.69
7516 7903 3.345414 TCCTCGTTCAACTAGTCCTCTC 58.655 50.000 0.00 0.00 0.00 3.20
7517 7904 3.009253 TCCTCGTTCAACTAGTCCTCTCT 59.991 47.826 0.00 0.00 0.00 3.10
7518 7905 3.759618 CCTCGTTCAACTAGTCCTCTCTT 59.240 47.826 0.00 0.00 0.00 2.85
7519 7906 4.142556 CCTCGTTCAACTAGTCCTCTCTTC 60.143 50.000 0.00 0.00 0.00 2.87
7520 7907 4.653868 TCGTTCAACTAGTCCTCTCTTCT 58.346 43.478 0.00 0.00 0.00 2.85
7521 7908 4.456222 TCGTTCAACTAGTCCTCTCTTCTG 59.544 45.833 0.00 0.00 0.00 3.02
7522 7909 4.380023 CGTTCAACTAGTCCTCTCTTCTGG 60.380 50.000 0.00 0.00 0.00 3.86
7523 7910 3.702792 TCAACTAGTCCTCTCTTCTGGG 58.297 50.000 0.00 0.00 0.00 4.45
7524 7911 2.763448 CAACTAGTCCTCTCTTCTGGGG 59.237 54.545 0.00 0.00 0.00 4.96
7525 7912 1.289530 ACTAGTCCTCTCTTCTGGGGG 59.710 57.143 0.00 0.00 0.00 5.40
7526 7913 0.032017 TAGTCCTCTCTTCTGGGGGC 60.032 60.000 0.00 0.00 0.00 5.80
7527 7914 1.306568 GTCCTCTCTTCTGGGGGCT 60.307 63.158 0.00 0.00 0.00 5.19
7528 7915 1.306482 TCCTCTCTTCTGGGGGCTG 60.306 63.158 0.00 0.00 0.00 4.85
7529 7916 2.373707 CCTCTCTTCTGGGGGCTGG 61.374 68.421 0.00 0.00 0.00 4.85
7530 7917 1.614824 CTCTCTTCTGGGGGCTGGT 60.615 63.158 0.00 0.00 0.00 4.00
7531 7918 0.325671 CTCTCTTCTGGGGGCTGGTA 60.326 60.000 0.00 0.00 0.00 3.25
7532 7919 0.325671 TCTCTTCTGGGGGCTGGTAG 60.326 60.000 0.00 0.00 0.00 3.18
7533 7920 0.325671 CTCTTCTGGGGGCTGGTAGA 60.326 60.000 0.00 0.00 0.00 2.59
7534 7921 0.343372 TCTTCTGGGGGCTGGTAGAT 59.657 55.000 0.00 0.00 0.00 1.98
7535 7922 0.761802 CTTCTGGGGGCTGGTAGATC 59.238 60.000 0.00 0.00 0.00 2.75
7536 7923 1.048724 TTCTGGGGGCTGGTAGATCG 61.049 60.000 0.00 0.00 0.00 3.69
7537 7924 1.457643 CTGGGGGCTGGTAGATCGA 60.458 63.158 0.00 0.00 0.00 3.59
7538 7925 0.833834 CTGGGGGCTGGTAGATCGAT 60.834 60.000 0.00 0.00 0.00 3.59
7539 7926 0.832135 TGGGGGCTGGTAGATCGATC 60.832 60.000 17.91 17.91 0.00 3.69
7540 7927 0.543174 GGGGGCTGGTAGATCGATCT 60.543 60.000 29.58 29.58 40.86 2.75
7541 7928 0.605589 GGGGCTGGTAGATCGATCTG 59.394 60.000 33.22 19.64 37.76 2.90
7542 7929 0.037790 GGGCTGGTAGATCGATCTGC 60.038 60.000 33.22 31.09 37.76 4.26
7549 7936 3.684103 GTAGATCGATCTGCCCTATCG 57.316 52.381 33.22 6.19 45.88 2.92
7550 7937 2.208132 AGATCGATCTGCCCTATCGT 57.792 50.000 26.78 0.00 45.01 3.73
7551 7938 3.351794 AGATCGATCTGCCCTATCGTA 57.648 47.619 26.78 1.63 45.01 3.43
7552 7939 3.687125 AGATCGATCTGCCCTATCGTAA 58.313 45.455 26.78 0.00 45.01 3.18
7553 7940 3.692101 AGATCGATCTGCCCTATCGTAAG 59.308 47.826 26.78 0.00 45.01 2.34
7554 7941 2.160205 TCGATCTGCCCTATCGTAAGG 58.840 52.381 10.88 0.00 45.01 2.69
7555 7942 2.160205 CGATCTGCCCTATCGTAAGGA 58.840 52.381 7.29 0.00 40.97 3.36
7556 7943 2.755655 CGATCTGCCCTATCGTAAGGAT 59.244 50.000 7.29 0.00 40.97 3.24
7557 7944 3.428180 CGATCTGCCCTATCGTAAGGATG 60.428 52.174 7.29 0.00 40.97 3.51
7558 7945 2.248248 TCTGCCCTATCGTAAGGATGG 58.752 52.381 7.29 0.00 39.15 3.51
7559 7946 0.685097 TGCCCTATCGTAAGGATGGC 59.315 55.000 7.29 0.00 42.05 4.40
7560 7947 0.685097 GCCCTATCGTAAGGATGGCA 59.315 55.000 7.29 0.00 41.58 4.92
7561 7948 1.338200 GCCCTATCGTAAGGATGGCAG 60.338 57.143 7.29 0.00 41.58 4.85
7562 7949 1.338200 CCCTATCGTAAGGATGGCAGC 60.338 57.143 0.00 0.00 39.15 5.25
7563 7950 1.344438 CCTATCGTAAGGATGGCAGCA 59.656 52.381 4.64 0.00 39.15 4.41
7564 7951 2.408050 CTATCGTAAGGATGGCAGCAC 58.592 52.381 4.64 0.00 36.55 4.40
7565 7952 0.530650 ATCGTAAGGATGGCAGCACG 60.531 55.000 4.64 6.41 32.92 5.34
7566 7953 2.813179 CGTAAGGATGGCAGCACGC 61.813 63.158 4.64 0.00 41.28 5.34
7567 7954 2.511373 TAAGGATGGCAGCACGCG 60.511 61.111 3.53 3.53 43.84 6.01
7585 7972 3.564027 GCGGGTCTTCGGCATTCG 61.564 66.667 0.00 0.00 40.82 3.34
7586 7973 2.890474 CGGGTCTTCGGCATTCGG 60.890 66.667 0.00 0.00 39.77 4.30
7587 7974 3.202706 GGGTCTTCGGCATTCGGC 61.203 66.667 0.00 0.00 43.74 5.54
7596 7983 4.576993 GCATTCGGCAACAAAGGG 57.423 55.556 0.00 0.00 43.97 3.95
7597 7984 1.963679 GCATTCGGCAACAAAGGGA 59.036 52.632 0.00 0.00 43.97 4.20
7598 7985 0.316841 GCATTCGGCAACAAAGGGAA 59.683 50.000 0.00 0.00 43.97 3.97
7599 7986 1.669795 GCATTCGGCAACAAAGGGAAG 60.670 52.381 0.00 0.00 43.97 3.46
7600 7987 1.067635 CATTCGGCAACAAAGGGAAGG 60.068 52.381 0.00 0.00 0.00 3.46
7601 7988 0.825840 TTCGGCAACAAAGGGAAGGG 60.826 55.000 0.00 0.00 0.00 3.95
7602 7989 2.275380 CGGCAACAAAGGGAAGGGG 61.275 63.158 0.00 0.00 0.00 4.79
7603 7990 1.155155 GGCAACAAAGGGAAGGGGA 59.845 57.895 0.00 0.00 0.00 4.81
7604 7991 0.471022 GGCAACAAAGGGAAGGGGAA 60.471 55.000 0.00 0.00 0.00 3.97
7605 7992 0.969149 GCAACAAAGGGAAGGGGAAG 59.031 55.000 0.00 0.00 0.00 3.46
7606 7993 1.480498 GCAACAAAGGGAAGGGGAAGA 60.480 52.381 0.00 0.00 0.00 2.87
7607 7994 2.823152 GCAACAAAGGGAAGGGGAAGAT 60.823 50.000 0.00 0.00 0.00 2.40
7608 7995 3.092301 CAACAAAGGGAAGGGGAAGATC 58.908 50.000 0.00 0.00 0.00 2.75
7609 7996 1.282157 ACAAAGGGAAGGGGAAGATCG 59.718 52.381 0.00 0.00 0.00 3.69
7610 7997 1.559682 CAAAGGGAAGGGGAAGATCGA 59.440 52.381 0.00 0.00 0.00 3.59
7611 7998 1.501582 AAGGGAAGGGGAAGATCGAG 58.498 55.000 0.00 0.00 0.00 4.04
7612 7999 0.399233 AGGGAAGGGGAAGATCGAGG 60.399 60.000 0.00 0.00 0.00 4.63
7613 8000 0.398664 GGGAAGGGGAAGATCGAGGA 60.399 60.000 0.00 0.00 0.00 3.71
7614 8001 1.723288 GGAAGGGGAAGATCGAGGAT 58.277 55.000 0.00 0.00 0.00 3.24
7615 8002 1.621317 GGAAGGGGAAGATCGAGGATC 59.379 57.143 0.00 0.00 39.17 3.36
7627 8014 5.841810 AGATCGAGGATCTCATGAAAGAAC 58.158 41.667 2.36 0.00 45.03 3.01
7628 8015 5.598005 AGATCGAGGATCTCATGAAAGAACT 59.402 40.000 2.36 0.00 45.03 3.01
7629 8016 5.667539 TCGAGGATCTCATGAAAGAACTT 57.332 39.130 0.00 0.00 0.00 2.66
7630 8017 5.414360 TCGAGGATCTCATGAAAGAACTTG 58.586 41.667 0.00 0.00 0.00 3.16
7631 8018 5.185828 TCGAGGATCTCATGAAAGAACTTGA 59.814 40.000 0.00 2.11 30.45 3.02
7632 8019 5.290643 CGAGGATCTCATGAAAGAACTTGAC 59.709 44.000 0.00 0.00 0.00 3.18
7633 8020 5.495640 AGGATCTCATGAAAGAACTTGACC 58.504 41.667 0.00 0.00 0.00 4.02
7634 8021 5.250313 AGGATCTCATGAAAGAACTTGACCT 59.750 40.000 0.00 0.00 0.00 3.85
7635 8022 5.353678 GGATCTCATGAAAGAACTTGACCTG 59.646 44.000 0.00 0.00 0.00 4.00
7636 8023 5.551305 TCTCATGAAAGAACTTGACCTGA 57.449 39.130 0.00 0.00 0.00 3.86
7637 8024 5.928976 TCTCATGAAAGAACTTGACCTGAA 58.071 37.500 0.00 0.00 0.00 3.02
7638 8025 5.994054 TCTCATGAAAGAACTTGACCTGAAG 59.006 40.000 0.00 0.00 0.00 3.02
7639 8026 5.065914 TCATGAAAGAACTTGACCTGAAGG 58.934 41.667 0.00 0.00 42.17 3.46
7640 8027 4.771114 TGAAAGAACTTGACCTGAAGGA 57.229 40.909 2.62 0.00 38.94 3.36
7641 8028 4.708177 TGAAAGAACTTGACCTGAAGGAG 58.292 43.478 2.62 0.00 38.94 3.69
7643 8030 2.977808 AGAACTTGACCTGAAGGAGGA 58.022 47.619 2.62 0.00 46.33 3.71
7644 8031 3.525862 AGAACTTGACCTGAAGGAGGAT 58.474 45.455 2.62 0.00 46.33 3.24
7645 8032 3.262915 AGAACTTGACCTGAAGGAGGATG 59.737 47.826 2.62 0.00 46.33 3.51
7646 8033 2.907892 ACTTGACCTGAAGGAGGATGA 58.092 47.619 2.62 0.00 46.33 2.92
7647 8034 3.458831 ACTTGACCTGAAGGAGGATGAT 58.541 45.455 2.62 0.00 46.33 2.45
7648 8035 3.454082 ACTTGACCTGAAGGAGGATGATC 59.546 47.826 2.62 0.00 46.33 2.92
7649 8036 3.411454 TGACCTGAAGGAGGATGATCT 57.589 47.619 2.62 0.00 46.33 2.75
7650 8037 3.729108 TGACCTGAAGGAGGATGATCTT 58.271 45.455 2.62 0.00 46.33 2.40
7651 8038 3.453717 TGACCTGAAGGAGGATGATCTTG 59.546 47.826 2.62 0.00 46.33 3.02
7652 8039 3.708631 GACCTGAAGGAGGATGATCTTGA 59.291 47.826 2.62 0.00 46.33 3.02
7653 8040 4.305524 ACCTGAAGGAGGATGATCTTGAT 58.694 43.478 2.62 0.00 46.33 2.57
7654 8041 4.102838 ACCTGAAGGAGGATGATCTTGATG 59.897 45.833 2.62 0.00 46.33 3.07
7655 8042 4.347292 CCTGAAGGAGGATGATCTTGATGA 59.653 45.833 0.00 0.00 46.33 2.92
7656 8043 5.013287 CCTGAAGGAGGATGATCTTGATGAT 59.987 44.000 0.00 0.00 46.33 2.45
7657 8044 5.866207 TGAAGGAGGATGATCTTGATGATG 58.134 41.667 0.00 0.00 35.14 3.07
7658 8045 5.368816 TGAAGGAGGATGATCTTGATGATGT 59.631 40.000 0.00 0.00 35.14 3.06
7659 8046 5.230323 AGGAGGATGATCTTGATGATGTG 57.770 43.478 0.00 0.00 35.14 3.21
7660 8047 4.041815 AGGAGGATGATCTTGATGATGTGG 59.958 45.833 0.00 0.00 35.14 4.17
7661 8048 4.202440 GGAGGATGATCTTGATGATGTGGT 60.202 45.833 0.00 0.00 35.14 4.16
7662 8049 4.715713 AGGATGATCTTGATGATGTGGTG 58.284 43.478 0.00 0.00 35.14 4.17
7663 8050 4.165565 AGGATGATCTTGATGATGTGGTGT 59.834 41.667 0.00 0.00 35.14 4.16
7664 8051 4.885907 GGATGATCTTGATGATGTGGTGTT 59.114 41.667 0.00 0.00 35.14 3.32
7665 8052 5.359009 GGATGATCTTGATGATGTGGTGTTT 59.641 40.000 0.00 0.00 35.14 2.83
7666 8053 5.632244 TGATCTTGATGATGTGGTGTTTG 57.368 39.130 0.00 0.00 35.14 2.93
7667 8054 5.315348 TGATCTTGATGATGTGGTGTTTGA 58.685 37.500 0.00 0.00 35.14 2.69
7668 8055 5.413523 TGATCTTGATGATGTGGTGTTTGAG 59.586 40.000 0.00 0.00 35.14 3.02
7669 8056 4.074259 TCTTGATGATGTGGTGTTTGAGG 58.926 43.478 0.00 0.00 0.00 3.86
7670 8057 3.786368 TGATGATGTGGTGTTTGAGGA 57.214 42.857 0.00 0.00 0.00 3.71
7671 8058 3.678289 TGATGATGTGGTGTTTGAGGAG 58.322 45.455 0.00 0.00 0.00 3.69
7672 8059 2.566833 TGATGTGGTGTTTGAGGAGG 57.433 50.000 0.00 0.00 0.00 4.30
7673 8060 2.054021 TGATGTGGTGTTTGAGGAGGA 58.946 47.619 0.00 0.00 0.00 3.71
7674 8061 2.038952 TGATGTGGTGTTTGAGGAGGAG 59.961 50.000 0.00 0.00 0.00 3.69
7675 8062 0.764890 TGTGGTGTTTGAGGAGGAGG 59.235 55.000 0.00 0.00 0.00 4.30
7676 8063 1.056660 GTGGTGTTTGAGGAGGAGGA 58.943 55.000 0.00 0.00 0.00 3.71
7677 8064 1.630878 GTGGTGTTTGAGGAGGAGGAT 59.369 52.381 0.00 0.00 0.00 3.24
7678 8065 1.630369 TGGTGTTTGAGGAGGAGGATG 59.370 52.381 0.00 0.00 0.00 3.51
7679 8066 1.680249 GGTGTTTGAGGAGGAGGATGC 60.680 57.143 0.00 0.00 0.00 3.91
7680 8067 0.620556 TGTTTGAGGAGGAGGATGCC 59.379 55.000 0.00 0.00 0.00 4.40
7681 8068 0.106967 GTTTGAGGAGGAGGATGCCC 60.107 60.000 0.00 0.00 0.00 5.36
7682 8069 1.281925 TTTGAGGAGGAGGATGCCCC 61.282 60.000 0.00 0.00 0.00 5.80
7683 8070 3.237741 GAGGAGGAGGATGCCCCG 61.238 72.222 0.00 0.00 40.87 5.73
7684 8071 4.095400 AGGAGGAGGATGCCCCGT 62.095 66.667 0.00 0.00 40.87 5.28
7685 8072 3.551407 GGAGGAGGATGCCCCGTC 61.551 72.222 0.00 0.00 40.87 4.79
7686 8073 2.764128 GAGGAGGATGCCCCGTCA 60.764 66.667 0.00 0.00 40.87 4.35
7687 8074 2.765807 AGGAGGATGCCCCGTCAG 60.766 66.667 0.00 0.00 40.87 3.51
7688 8075 2.764128 GGAGGATGCCCCGTCAGA 60.764 66.667 0.00 0.00 40.87 3.27
7689 8076 2.367202 GGAGGATGCCCCGTCAGAA 61.367 63.158 0.00 0.00 40.87 3.02
7690 8077 1.602237 GAGGATGCCCCGTCAGAAA 59.398 57.895 0.00 0.00 40.87 2.52
7691 8078 0.035439 GAGGATGCCCCGTCAGAAAA 60.035 55.000 0.00 0.00 40.87 2.29
7692 8079 0.035056 AGGATGCCCCGTCAGAAAAG 60.035 55.000 0.00 0.00 40.87 2.27
7693 8080 0.035439 GGATGCCCCGTCAGAAAAGA 60.035 55.000 0.00 0.00 0.00 2.52
7694 8081 1.613255 GGATGCCCCGTCAGAAAAGAA 60.613 52.381 0.00 0.00 0.00 2.52
7695 8082 1.468914 GATGCCCCGTCAGAAAAGAAC 59.531 52.381 0.00 0.00 0.00 3.01
7696 8083 0.536460 TGCCCCGTCAGAAAAGAACC 60.536 55.000 0.00 0.00 0.00 3.62
7697 8084 0.250770 GCCCCGTCAGAAAAGAACCT 60.251 55.000 0.00 0.00 0.00 3.50
7698 8085 1.809684 CCCCGTCAGAAAAGAACCTC 58.190 55.000 0.00 0.00 0.00 3.85
7699 8086 1.429463 CCCGTCAGAAAAGAACCTCG 58.571 55.000 0.00 0.00 0.00 4.63
7700 8087 1.429463 CCGTCAGAAAAGAACCTCGG 58.571 55.000 0.00 0.00 0.00 4.63
7701 8088 1.429463 CGTCAGAAAAGAACCTCGGG 58.571 55.000 0.00 0.00 0.00 5.14
7702 8089 1.270147 CGTCAGAAAAGAACCTCGGGT 60.270 52.381 0.00 0.00 37.65 5.28
7703 8090 2.143925 GTCAGAAAAGAACCTCGGGTG 58.856 52.381 0.00 0.00 35.34 4.61
7704 8091 1.071699 TCAGAAAAGAACCTCGGGTGG 59.928 52.381 0.00 0.00 35.34 4.61
7705 8092 1.071699 CAGAAAAGAACCTCGGGTGGA 59.928 52.381 0.00 0.00 35.34 4.02
7706 8093 1.985895 AGAAAAGAACCTCGGGTGGAT 59.014 47.619 0.00 0.00 35.34 3.41
7707 8094 2.084546 GAAAAGAACCTCGGGTGGATG 58.915 52.381 0.00 0.00 35.34 3.51
7708 8095 1.358152 AAAGAACCTCGGGTGGATGA 58.642 50.000 0.00 0.00 35.34 2.92
7709 8096 1.584724 AAGAACCTCGGGTGGATGAT 58.415 50.000 0.00 0.00 35.34 2.45
7710 8097 1.123928 AGAACCTCGGGTGGATGATC 58.876 55.000 0.00 0.00 35.34 2.92
7711 8098 1.123928 GAACCTCGGGTGGATGATCT 58.876 55.000 0.00 0.00 35.34 2.75
7712 8099 1.486726 GAACCTCGGGTGGATGATCTT 59.513 52.381 0.00 0.00 35.34 2.40
7713 8100 0.833287 ACCTCGGGTGGATGATCTTG 59.167 55.000 0.00 0.00 32.98 3.02
7714 8101 0.107456 CCTCGGGTGGATGATCTTGG 59.893 60.000 0.00 0.00 0.00 3.61
7715 8102 0.833287 CTCGGGTGGATGATCTTGGT 59.167 55.000 0.00 0.00 0.00 3.67
7716 8103 0.541392 TCGGGTGGATGATCTTGGTG 59.459 55.000 0.00 0.00 0.00 4.17
7717 8104 1.097547 CGGGTGGATGATCTTGGTGC 61.098 60.000 0.00 0.00 0.00 5.01
7718 8105 1.097547 GGGTGGATGATCTTGGTGCG 61.098 60.000 0.00 0.00 0.00 5.34
7719 8106 1.097547 GGTGGATGATCTTGGTGCGG 61.098 60.000 0.00 0.00 0.00 5.69
7720 8107 1.097547 GTGGATGATCTTGGTGCGGG 61.098 60.000 0.00 0.00 0.00 6.13
7721 8108 1.224592 GGATGATCTTGGTGCGGGT 59.775 57.895 0.00 0.00 0.00 5.28
7722 8109 0.394352 GGATGATCTTGGTGCGGGTT 60.394 55.000 0.00 0.00 0.00 4.11
7723 8110 1.017387 GATGATCTTGGTGCGGGTTC 58.983 55.000 0.00 0.00 0.00 3.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 1.606531 CAGGAGCTTAGCAGGCCTT 59.393 57.895 0.00 0.00 0.00 4.35
31 32 2.515757 GGCTGGCAGGAGCTTAGC 60.516 66.667 17.64 0.00 44.44 3.09
47 48 2.178912 TGTTAAGTTCGCCTCCTTGG 57.821 50.000 0.00 0.00 39.35 3.61
48 49 4.332819 CCTAATGTTAAGTTCGCCTCCTTG 59.667 45.833 0.00 0.00 0.00 3.61
56 59 9.708222 CTGATCATTTTCCTAATGTTAAGTTCG 57.292 33.333 0.00 0.00 0.00 3.95
123 126 4.541482 TCGGTCGTACGCATCGGC 62.541 66.667 11.24 0.00 0.00 5.54
270 274 2.818274 GGAAAGCGACGGCCGAAT 60.818 61.111 35.90 11.07 41.76 3.34
331 335 0.106769 TGGCTGTCTTTGTCCTGCAA 60.107 50.000 0.00 0.00 34.87 4.08
350 354 5.777732 TGTTTGGAGTGCACCCTTAATTAAT 59.222 36.000 14.63 0.00 0.00 1.40
370 374 6.006449 AGTAGAAAGTGCCTGAATGATGTTT 58.994 36.000 0.00 0.00 0.00 2.83
400 404 0.798776 GATCCGTTTCAGTGCCAGTG 59.201 55.000 0.00 0.00 0.00 3.66
577 581 8.840321 TCTTTTTCTTTGTTCACTATCCTCTTG 58.160 33.333 0.00 0.00 0.00 3.02
767 771 5.254901 ACGAGTAGGATAACAGAACTGTCT 58.745 41.667 7.93 3.96 44.13 3.41
775 779 5.613329 ACCTAGAGACGAGTAGGATAACAG 58.387 45.833 2.39 0.00 38.54 3.16
904 908 5.907197 AGTGTCATTGTCTTGTTAGTTCG 57.093 39.130 0.00 0.00 0.00 3.95
979 983 5.280470 CCATGCTATGCCTACCAGGTAATTA 60.280 44.000 0.00 0.00 37.80 1.40
1129 1133 0.327259 AGCATCAGCACCACATCAGT 59.673 50.000 0.00 0.00 45.49 3.41
1247 1251 2.190578 CTCGGGGAAGGATGGTGC 59.809 66.667 0.00 0.00 0.00 5.01
1332 1336 6.668323 TGTAAGCAAGTTCTTATCAGCAAAC 58.332 36.000 0.00 0.00 31.92 2.93
1588 1760 2.901051 AAGGCCACGCGAAGATACCG 62.901 60.000 15.93 0.00 0.00 4.02
1609 1781 9.476202 GTTTCTGGGAAATACATAAATAATGGC 57.524 33.333 0.00 0.00 40.16 4.40
1834 2008 7.971168 AGAGTTGAACTATCAAAGACATACTCG 59.029 37.037 0.00 0.00 46.66 4.18
1921 2095 8.826765 CCTGTGGTATTCCTAGGTATTATGATT 58.173 37.037 9.08 0.00 35.54 2.57
2159 2333 2.930826 ACACTACCTGTCCACCTTTG 57.069 50.000 0.00 0.00 0.00 2.77
2222 2396 3.753272 GCTGCATTCTTTGTACCTTCTCA 59.247 43.478 0.00 0.00 0.00 3.27
2486 2661 4.954826 GCTGTAGAAACTTCCCTACCTAGA 59.045 45.833 0.00 0.00 35.57 2.43
2800 2975 3.004734 ACTGGTCCATTGCTTTCTTTTCG 59.995 43.478 0.00 0.00 0.00 3.46
2812 2987 5.241403 TGAGATTGTTGTACTGGTCCATT 57.759 39.130 0.00 0.00 0.00 3.16
2881 3056 1.765904 GAAAGGAAACCCAGGCCAAAA 59.234 47.619 5.01 0.00 0.00 2.44
3155 3330 7.951530 ACAATTGAAGATTTGCAAAGTTAGG 57.048 32.000 18.19 3.67 0.00 2.69
3162 3337 5.435291 ACCCAAACAATTGAAGATTTGCAA 58.565 33.333 13.59 0.00 38.94 4.08
3170 3345 5.452078 TGCTCTAACCCAAACAATTGAAG 57.548 39.130 13.59 1.02 38.94 3.02
3537 3712 6.715280 TCTCATCCATTCTAGCTTGAAACTT 58.285 36.000 14.51 0.00 0.00 2.66
3543 3718 3.645212 TCCCTCTCATCCATTCTAGCTTG 59.355 47.826 0.00 0.00 0.00 4.01
3681 3856 1.539388 TCAATGAATCTTGCCGCGTTT 59.461 42.857 4.92 0.00 0.00 3.60
3911 4086 0.647410 CCAATGCACTAGTCGCTTCG 59.353 55.000 15.28 2.86 0.00 3.79
4126 4301 8.526147 CCTGAGTGGATCATTTCAAATTAGTTT 58.474 33.333 0.00 0.00 37.28 2.66
4208 4383 5.930135 AGTTTCTTGGTGTGTCTCTTGTAT 58.070 37.500 0.00 0.00 0.00 2.29
4294 4469 2.233922 GCTCCCAGCTGAACTTGTACTA 59.766 50.000 17.39 0.00 38.45 1.82
4408 4583 4.792068 TCTTGGAAACCTTGACATCTGTT 58.208 39.130 0.00 0.00 0.00 3.16
4714 4889 8.280909 ACACTATGTTTTTAAATGTGAAAGCG 57.719 30.769 0.00 0.00 0.00 4.68
4991 5166 7.923414 AGGAACTACAATTAAGATGACCAAC 57.077 36.000 0.00 0.00 36.02 3.77
5070 5245 2.627515 TCATGGCTCACCTTAGCATC 57.372 50.000 0.00 0.00 44.64 3.91
5159 5335 6.693545 GTGTATCGAGTCTACCTTTCAAGATG 59.306 42.308 0.00 0.00 0.00 2.90
5239 5415 5.170748 CACTGTTGACATCATAGTAGCACA 58.829 41.667 0.00 0.00 0.00 4.57
5240 5416 4.033358 GCACTGTTGACATCATAGTAGCAC 59.967 45.833 0.00 0.00 0.00 4.40
5276 5454 7.609918 ACAAGTGTCACCAATATAGCAATGTTA 59.390 33.333 0.00 0.00 0.00 2.41
5350 5528 1.069636 GCCACTTGACTTGCTTCTTCG 60.070 52.381 0.00 0.00 0.00 3.79
5377 5555 2.805671 TGTTCTCATGTTACCAACTGCG 59.194 45.455 0.00 0.00 0.00 5.18
5545 5723 4.575885 ACTTCGCACCAACATAGTAACAT 58.424 39.130 0.00 0.00 0.00 2.71
5563 5741 6.402226 CGGAGTTGCCTTGACTAATAAACTTC 60.402 42.308 0.00 0.00 0.00 3.01
5805 5983 5.299279 GCTGGAATCGATTTGGGATTTTCTA 59.701 40.000 12.81 0.00 34.41 2.10
5931 6109 4.453480 AGAGGGAATGTTCAAGGTGAAA 57.547 40.909 0.00 0.00 38.22 2.69
6380 6559 1.883275 CTCTCTCTCCAACTGACGTGT 59.117 52.381 0.00 0.00 0.00 4.49
6417 6596 1.002746 TATGCGCTGTTTCTGCCCA 60.003 52.632 9.73 0.00 0.00 5.36
6726 6905 1.665169 CGATGCATTGTCGAATCACCA 59.335 47.619 0.00 0.00 41.40 4.17
6727 6906 1.933181 TCGATGCATTGTCGAATCACC 59.067 47.619 13.73 0.00 44.25 4.02
6734 6913 2.031314 AGCTCAAATCGATGCATTGTCG 59.969 45.455 13.73 7.85 40.30 4.35
6736 6915 3.313526 GGTAGCTCAAATCGATGCATTGT 59.686 43.478 13.73 0.00 0.00 2.71
6737 6916 3.605461 CGGTAGCTCAAATCGATGCATTG 60.605 47.826 7.70 7.70 0.00 2.82
6738 6917 2.545526 CGGTAGCTCAAATCGATGCATT 59.454 45.455 0.00 0.00 0.00 3.56
6740 6919 1.136110 TCGGTAGCTCAAATCGATGCA 59.864 47.619 0.00 0.00 0.00 3.96
6775 6956 2.235402 TGCCTAAGCCAACTGTACTACC 59.765 50.000 0.00 0.00 38.69 3.18
6860 7042 4.458829 GCTTTAGCCCCCACCCCC 62.459 72.222 0.00 0.00 34.31 5.40
6884 7246 0.179000 ACCACCATCTCCTGCGAATC 59.821 55.000 0.00 0.00 0.00 2.52
7191 7578 4.292178 GCCCATCCTCTCTCGCGG 62.292 72.222 6.13 0.00 0.00 6.46
7221 7608 1.378514 GCCGAGCCCTTCCATTTCA 60.379 57.895 0.00 0.00 0.00 2.69
7234 7621 2.565645 CCGGTCTAGATGGGCCGAG 61.566 68.421 18.35 7.17 46.33 4.63
7251 7638 2.492560 CGGCAAATAAACCGCCCC 59.507 61.111 0.00 0.00 43.44 5.80
7256 7643 4.649088 AATAGGAAGCGGCAAATAAACC 57.351 40.909 1.45 0.00 0.00 3.27
7257 7644 4.733405 CGAAATAGGAAGCGGCAAATAAAC 59.267 41.667 1.45 0.00 0.00 2.01
7258 7645 4.732355 GCGAAATAGGAAGCGGCAAATAAA 60.732 41.667 1.45 0.00 0.00 1.40
7259 7646 3.242936 GCGAAATAGGAAGCGGCAAATAA 60.243 43.478 1.45 0.00 0.00 1.40
7260 7647 2.289547 GCGAAATAGGAAGCGGCAAATA 59.710 45.455 1.45 0.00 0.00 1.40
7261 7648 1.065551 GCGAAATAGGAAGCGGCAAAT 59.934 47.619 1.45 0.00 0.00 2.32
7262 7649 0.450184 GCGAAATAGGAAGCGGCAAA 59.550 50.000 1.45 0.00 0.00 3.68
7263 7650 2.094904 GCGAAATAGGAAGCGGCAA 58.905 52.632 1.45 0.00 0.00 4.52
7264 7651 3.808036 GCGAAATAGGAAGCGGCA 58.192 55.556 1.45 0.00 0.00 5.69
7268 7655 3.787805 GCCTTAAACGCGAAATAGGAAGC 60.788 47.826 15.93 0.04 0.00 3.86
7269 7656 3.372822 TGCCTTAAACGCGAAATAGGAAG 59.627 43.478 15.93 5.93 0.00 3.46
7270 7657 3.336468 TGCCTTAAACGCGAAATAGGAA 58.664 40.909 15.93 5.85 0.00 3.36
7271 7658 2.975266 TGCCTTAAACGCGAAATAGGA 58.025 42.857 15.93 0.00 0.00 2.94
7272 7659 3.311322 TGATGCCTTAAACGCGAAATAGG 59.689 43.478 15.93 15.02 0.00 2.57
7273 7660 4.530094 TGATGCCTTAAACGCGAAATAG 57.470 40.909 15.93 4.50 0.00 1.73
7274 7661 4.948608 TTGATGCCTTAAACGCGAAATA 57.051 36.364 15.93 0.00 0.00 1.40
7275 7662 3.840890 TTGATGCCTTAAACGCGAAAT 57.159 38.095 15.93 0.00 0.00 2.17
7276 7663 3.627732 TTTGATGCCTTAAACGCGAAA 57.372 38.095 15.93 2.79 0.00 3.46
7277 7664 3.840890 ATTTGATGCCTTAAACGCGAA 57.159 38.095 15.93 0.00 0.00 4.70
7278 7665 3.685272 TGTATTTGATGCCTTAAACGCGA 59.315 39.130 15.93 0.00 0.00 5.87
7279 7666 4.009798 TGTATTTGATGCCTTAAACGCG 57.990 40.909 3.53 3.53 0.00 6.01
7280 7667 3.791353 GCTGTATTTGATGCCTTAAACGC 59.209 43.478 0.00 0.00 0.00 4.84
7281 7668 4.028383 CGCTGTATTTGATGCCTTAAACG 58.972 43.478 0.00 0.00 0.00 3.60
7282 7669 4.351192 CCGCTGTATTTGATGCCTTAAAC 58.649 43.478 0.00 0.00 0.00 2.01
7283 7670 3.380004 CCCGCTGTATTTGATGCCTTAAA 59.620 43.478 0.00 0.00 0.00 1.52
7284 7671 2.948979 CCCGCTGTATTTGATGCCTTAA 59.051 45.455 0.00 0.00 0.00 1.85
7285 7672 2.571212 CCCGCTGTATTTGATGCCTTA 58.429 47.619 0.00 0.00 0.00 2.69
7286 7673 1.392589 CCCGCTGTATTTGATGCCTT 58.607 50.000 0.00 0.00 0.00 4.35
7287 7674 1.103398 GCCCGCTGTATTTGATGCCT 61.103 55.000 0.00 0.00 0.00 4.75
7288 7675 1.360192 GCCCGCTGTATTTGATGCC 59.640 57.895 0.00 0.00 0.00 4.40
7289 7676 0.455410 TTGCCCGCTGTATTTGATGC 59.545 50.000 0.00 0.00 0.00 3.91
7290 7677 1.745087 AGTTGCCCGCTGTATTTGATG 59.255 47.619 0.00 0.00 0.00 3.07
7291 7678 2.128771 AGTTGCCCGCTGTATTTGAT 57.871 45.000 0.00 0.00 0.00 2.57
7292 7679 2.772077 TAGTTGCCCGCTGTATTTGA 57.228 45.000 0.00 0.00 0.00 2.69
7293 7680 4.370364 AATTAGTTGCCCGCTGTATTTG 57.630 40.909 0.00 0.00 0.00 2.32
7294 7681 5.067283 CCTTAATTAGTTGCCCGCTGTATTT 59.933 40.000 0.00 0.00 0.00 1.40
7295 7682 4.578928 CCTTAATTAGTTGCCCGCTGTATT 59.421 41.667 0.00 0.00 0.00 1.89
7296 7683 4.134563 CCTTAATTAGTTGCCCGCTGTAT 58.865 43.478 0.00 0.00 0.00 2.29
7297 7684 3.198200 TCCTTAATTAGTTGCCCGCTGTA 59.802 43.478 0.00 0.00 0.00 2.74
7298 7685 2.026636 TCCTTAATTAGTTGCCCGCTGT 60.027 45.455 0.00 0.00 0.00 4.40
7299 7686 2.614057 CTCCTTAATTAGTTGCCCGCTG 59.386 50.000 0.00 0.00 0.00 5.18
7300 7687 2.238898 ACTCCTTAATTAGTTGCCCGCT 59.761 45.455 0.00 0.00 0.00 5.52
7301 7688 2.354821 CACTCCTTAATTAGTTGCCCGC 59.645 50.000 0.00 0.00 0.00 6.13
7302 7689 2.354821 GCACTCCTTAATTAGTTGCCCG 59.645 50.000 0.00 0.00 0.00 6.13
7303 7690 2.354821 CGCACTCCTTAATTAGTTGCCC 59.645 50.000 0.00 0.00 0.00 5.36
7304 7691 2.354821 CCGCACTCCTTAATTAGTTGCC 59.645 50.000 0.00 0.00 0.00 4.52
7305 7692 2.354821 CCCGCACTCCTTAATTAGTTGC 59.645 50.000 0.00 0.00 0.00 4.17
7306 7693 3.606687 ACCCGCACTCCTTAATTAGTTG 58.393 45.455 0.00 0.00 0.00 3.16
7307 7694 3.994931 ACCCGCACTCCTTAATTAGTT 57.005 42.857 0.00 0.00 0.00 2.24
7308 7695 3.370209 GGAACCCGCACTCCTTAATTAGT 60.370 47.826 0.00 0.00 0.00 2.24
7309 7696 3.203716 GGAACCCGCACTCCTTAATTAG 58.796 50.000 0.00 0.00 0.00 1.73
7310 7697 3.271055 GGAACCCGCACTCCTTAATTA 57.729 47.619 0.00 0.00 0.00 1.40
7311 7698 2.124277 GGAACCCGCACTCCTTAATT 57.876 50.000 0.00 0.00 0.00 1.40
7312 7699 3.875865 GGAACCCGCACTCCTTAAT 57.124 52.632 0.00 0.00 0.00 1.40
7331 7718 4.161754 AGGAACATAAACCCTAACGAGAGG 59.838 45.833 0.00 0.00 36.23 3.69
7332 7719 5.127356 AGAGGAACATAAACCCTAACGAGAG 59.873 44.000 0.00 0.00 0.00 3.20
7333 7720 5.021458 AGAGGAACATAAACCCTAACGAGA 58.979 41.667 0.00 0.00 0.00 4.04
7334 7721 5.340439 AGAGGAACATAAACCCTAACGAG 57.660 43.478 0.00 0.00 0.00 4.18
7335 7722 4.142315 CGAGAGGAACATAAACCCTAACGA 60.142 45.833 0.00 0.00 33.70 3.85
7336 7723 4.110482 CGAGAGGAACATAAACCCTAACG 58.890 47.826 0.00 0.00 0.00 3.18
7337 7724 5.082251 ACGAGAGGAACATAAACCCTAAC 57.918 43.478 0.00 0.00 0.00 2.34
7338 7725 4.142315 CGACGAGAGGAACATAAACCCTAA 60.142 45.833 0.00 0.00 0.00 2.69
7339 7726 3.379372 CGACGAGAGGAACATAAACCCTA 59.621 47.826 0.00 0.00 0.00 3.53
7340 7727 2.165845 CGACGAGAGGAACATAAACCCT 59.834 50.000 0.00 0.00 0.00 4.34
7341 7728 2.537401 CGACGAGAGGAACATAAACCC 58.463 52.381 0.00 0.00 0.00 4.11
7342 7729 1.925185 GCGACGAGAGGAACATAAACC 59.075 52.381 0.00 0.00 0.00 3.27
7343 7730 1.925185 GGCGACGAGAGGAACATAAAC 59.075 52.381 0.00 0.00 0.00 2.01
7344 7731 2.288961 GGCGACGAGAGGAACATAAA 57.711 50.000 0.00 0.00 0.00 1.40
7365 7752 1.982073 GATTTTCTCCACAGCGCCGG 61.982 60.000 2.29 1.97 0.00 6.13
7366 7753 1.021390 AGATTTTCTCCACAGCGCCG 61.021 55.000 2.29 0.00 0.00 6.46
7367 7754 1.131315 GAAGATTTTCTCCACAGCGCC 59.869 52.381 2.29 0.00 0.00 6.53
7368 7755 1.131315 GGAAGATTTTCTCCACAGCGC 59.869 52.381 0.00 0.00 33.68 5.92
7369 7756 2.704572 AGGAAGATTTTCTCCACAGCG 58.295 47.619 0.00 0.00 33.68 5.18
7370 7757 3.441922 GGAAGGAAGATTTTCTCCACAGC 59.558 47.826 0.00 0.00 31.30 4.40
7371 7758 4.013050 GGGAAGGAAGATTTTCTCCACAG 58.987 47.826 6.61 0.00 32.12 3.66
7372 7759 3.657727 AGGGAAGGAAGATTTTCTCCACA 59.342 43.478 6.61 0.00 32.12 4.17
7373 7760 4.265893 GAGGGAAGGAAGATTTTCTCCAC 58.734 47.826 6.61 0.00 32.12 4.02
7374 7761 3.267031 GGAGGGAAGGAAGATTTTCTCCA 59.733 47.826 6.61 0.00 39.30 3.86
7375 7762 3.267031 TGGAGGGAAGGAAGATTTTCTCC 59.733 47.826 0.00 0.00 39.77 3.71
7376 7763 4.576330 TGGAGGGAAGGAAGATTTTCTC 57.424 45.455 0.00 0.00 33.68 2.87
7377 7764 4.384647 CGATGGAGGGAAGGAAGATTTTCT 60.385 45.833 0.00 0.00 33.68 2.52
7378 7765 3.879892 CGATGGAGGGAAGGAAGATTTTC 59.120 47.826 0.00 0.00 0.00 2.29
7379 7766 3.267031 ACGATGGAGGGAAGGAAGATTTT 59.733 43.478 0.00 0.00 0.00 1.82
7380 7767 2.846827 ACGATGGAGGGAAGGAAGATTT 59.153 45.455 0.00 0.00 0.00 2.17
7381 7768 2.482494 ACGATGGAGGGAAGGAAGATT 58.518 47.619 0.00 0.00 0.00 2.40
7382 7769 2.182516 ACGATGGAGGGAAGGAAGAT 57.817 50.000 0.00 0.00 0.00 2.40
7383 7770 1.831736 GAACGATGGAGGGAAGGAAGA 59.168 52.381 0.00 0.00 0.00 2.87
7384 7771 1.834263 AGAACGATGGAGGGAAGGAAG 59.166 52.381 0.00 0.00 0.00 3.46
7385 7772 1.831736 GAGAACGATGGAGGGAAGGAA 59.168 52.381 0.00 0.00 0.00 3.36
7386 7773 1.007238 AGAGAACGATGGAGGGAAGGA 59.993 52.381 0.00 0.00 0.00 3.36
7387 7774 1.137872 CAGAGAACGATGGAGGGAAGG 59.862 57.143 0.00 0.00 0.00 3.46
7388 7775 1.137872 CCAGAGAACGATGGAGGGAAG 59.862 57.143 0.00 0.00 39.02 3.46
7389 7776 1.195115 CCAGAGAACGATGGAGGGAA 58.805 55.000 0.00 0.00 39.02 3.97
7390 7777 0.041238 ACCAGAGAACGATGGAGGGA 59.959 55.000 0.00 0.00 39.02 4.20
7391 7778 0.905357 AACCAGAGAACGATGGAGGG 59.095 55.000 0.00 0.00 39.02 4.30
7392 7779 1.134670 GGAACCAGAGAACGATGGAGG 60.135 57.143 0.00 0.00 39.02 4.30
7393 7780 1.827969 AGGAACCAGAGAACGATGGAG 59.172 52.381 0.00 0.00 39.02 3.86
7394 7781 1.938585 AGGAACCAGAGAACGATGGA 58.061 50.000 0.00 0.00 39.02 3.41
7395 7782 2.744202 CAAAGGAACCAGAGAACGATGG 59.256 50.000 0.00 0.00 42.60 3.51
7396 7783 2.744202 CCAAAGGAACCAGAGAACGATG 59.256 50.000 0.00 0.00 0.00 3.84
7397 7784 2.876079 GCCAAAGGAACCAGAGAACGAT 60.876 50.000 0.00 0.00 0.00 3.73
7398 7785 1.542547 GCCAAAGGAACCAGAGAACGA 60.543 52.381 0.00 0.00 0.00 3.85
7399 7786 0.875059 GCCAAAGGAACCAGAGAACG 59.125 55.000 0.00 0.00 0.00 3.95
7400 7787 1.882623 CAGCCAAAGGAACCAGAGAAC 59.117 52.381 0.00 0.00 0.00 3.01
7401 7788 1.202927 CCAGCCAAAGGAACCAGAGAA 60.203 52.381 0.00 0.00 0.00 2.87
7402 7789 0.401738 CCAGCCAAAGGAACCAGAGA 59.598 55.000 0.00 0.00 0.00 3.10
7403 7790 0.610232 CCCAGCCAAAGGAACCAGAG 60.610 60.000 0.00 0.00 0.00 3.35
7404 7791 1.065410 TCCCAGCCAAAGGAACCAGA 61.065 55.000 0.00 0.00 0.00 3.86
7405 7792 0.895559 GTCCCAGCCAAAGGAACCAG 60.896 60.000 0.00 0.00 32.81 4.00
7406 7793 1.152830 GTCCCAGCCAAAGGAACCA 59.847 57.895 0.00 0.00 32.81 3.67
7407 7794 1.971695 CGTCCCAGCCAAAGGAACC 60.972 63.158 0.00 0.00 32.81 3.62
7408 7795 1.971695 CCGTCCCAGCCAAAGGAAC 60.972 63.158 0.00 0.00 32.81 3.62
7409 7796 1.497309 ATCCGTCCCAGCCAAAGGAA 61.497 55.000 0.00 0.00 32.81 3.36
7410 7797 1.910580 GATCCGTCCCAGCCAAAGGA 61.911 60.000 0.00 0.00 0.00 3.36
7411 7798 1.452108 GATCCGTCCCAGCCAAAGG 60.452 63.158 0.00 0.00 0.00 3.11
7412 7799 1.452108 GGATCCGTCCCAGCCAAAG 60.452 63.158 0.00 0.00 38.69 2.77
7413 7800 1.784301 TTGGATCCGTCCCAGCCAAA 61.784 55.000 7.39 0.00 44.41 3.28
7414 7801 2.196997 CTTGGATCCGTCCCAGCCAA 62.197 60.000 7.39 0.00 44.41 4.52
7415 7802 2.609299 TTGGATCCGTCCCAGCCA 60.609 61.111 7.39 0.00 44.41 4.75
7416 7803 2.190578 CTTGGATCCGTCCCAGCC 59.809 66.667 7.39 0.00 44.41 4.85
7417 7804 2.190578 CCTTGGATCCGTCCCAGC 59.809 66.667 7.39 0.00 44.41 4.85
7418 7805 0.689745 TACCCTTGGATCCGTCCCAG 60.690 60.000 7.39 0.00 44.41 4.45
7419 7806 0.689745 CTACCCTTGGATCCGTCCCA 60.690 60.000 7.39 0.00 44.41 4.37
7420 7807 2.041206 GCTACCCTTGGATCCGTCCC 62.041 65.000 7.39 0.00 44.41 4.46
7421 7808 1.049289 AGCTACCCTTGGATCCGTCC 61.049 60.000 7.39 0.00 45.31 4.79
7422 7809 0.389757 GAGCTACCCTTGGATCCGTC 59.610 60.000 7.39 0.00 0.00 4.79
7423 7810 1.392710 CGAGCTACCCTTGGATCCGT 61.393 60.000 7.39 0.89 0.00 4.69
7424 7811 1.364171 CGAGCTACCCTTGGATCCG 59.636 63.158 7.39 0.00 0.00 4.18
7425 7812 0.105039 CACGAGCTACCCTTGGATCC 59.895 60.000 4.20 4.20 0.00 3.36
7426 7813 0.530870 GCACGAGCTACCCTTGGATC 60.531 60.000 0.00 0.00 37.91 3.36
7427 7814 1.522569 GCACGAGCTACCCTTGGAT 59.477 57.895 0.00 0.00 37.91 3.41
7428 7815 2.978824 GCACGAGCTACCCTTGGA 59.021 61.111 0.00 0.00 37.91 3.53
7438 7825 4.208686 CCGGGGAGTAGCACGAGC 62.209 72.222 0.00 0.00 42.56 5.03
7439 7826 4.208686 GCCGGGGAGTAGCACGAG 62.209 72.222 2.18 0.00 0.00 4.18
7445 7832 2.294170 TAGTCAGGGCCGGGGAGTAG 62.294 65.000 2.18 0.00 0.00 2.57
7446 7833 2.294170 CTAGTCAGGGCCGGGGAGTA 62.294 65.000 2.18 7.01 0.00 2.59
7447 7834 3.680196 TAGTCAGGGCCGGGGAGT 61.680 66.667 2.18 6.17 0.00 3.85
7448 7835 2.840102 CTAGTCAGGGCCGGGGAG 60.840 72.222 2.18 0.00 0.00 4.30
7449 7836 4.475444 CCTAGTCAGGGCCGGGGA 62.475 72.222 2.18 0.00 38.41 4.81
7458 7845 4.256920 CCCACAATCTGAAACCTAGTCAG 58.743 47.826 3.05 3.05 43.28 3.51
7459 7846 3.009033 CCCCACAATCTGAAACCTAGTCA 59.991 47.826 0.00 0.00 0.00 3.41
7460 7847 3.610911 CCCCACAATCTGAAACCTAGTC 58.389 50.000 0.00 0.00 0.00 2.59
7461 7848 2.308866 CCCCCACAATCTGAAACCTAGT 59.691 50.000 0.00 0.00 0.00 2.57
7462 7849 2.308866 ACCCCCACAATCTGAAACCTAG 59.691 50.000 0.00 0.00 0.00 3.02
7463 7850 2.354328 ACCCCCACAATCTGAAACCTA 58.646 47.619 0.00 0.00 0.00 3.08
7464 7851 1.158007 ACCCCCACAATCTGAAACCT 58.842 50.000 0.00 0.00 0.00 3.50
7465 7852 2.009681 AACCCCCACAATCTGAAACC 57.990 50.000 0.00 0.00 0.00 3.27
7466 7853 3.641436 AGAAAACCCCCACAATCTGAAAC 59.359 43.478 0.00 0.00 0.00 2.78
7467 7854 3.922375 AGAAAACCCCCACAATCTGAAA 58.078 40.909 0.00 0.00 0.00 2.69
7468 7855 3.611025 AGAAAACCCCCACAATCTGAA 57.389 42.857 0.00 0.00 0.00 3.02
7469 7856 3.010138 CCTAGAAAACCCCCACAATCTGA 59.990 47.826 0.00 0.00 0.00 3.27
7470 7857 3.356290 CCTAGAAAACCCCCACAATCTG 58.644 50.000 0.00 0.00 0.00 2.90
7471 7858 2.311841 CCCTAGAAAACCCCCACAATCT 59.688 50.000 0.00 0.00 0.00 2.40
7472 7859 2.042569 ACCCTAGAAAACCCCCACAATC 59.957 50.000 0.00 0.00 0.00 2.67
7473 7860 2.078611 ACCCTAGAAAACCCCCACAAT 58.921 47.619 0.00 0.00 0.00 2.71
7474 7861 1.536644 ACCCTAGAAAACCCCCACAA 58.463 50.000 0.00 0.00 0.00 3.33
7475 7862 1.536644 AACCCTAGAAAACCCCCACA 58.463 50.000 0.00 0.00 0.00 4.17
7476 7863 2.522185 GAAACCCTAGAAAACCCCCAC 58.478 52.381 0.00 0.00 0.00 4.61
7477 7864 1.430075 GGAAACCCTAGAAAACCCCCA 59.570 52.381 0.00 0.00 0.00 4.96
7478 7865 1.714787 AGGAAACCCTAGAAAACCCCC 59.285 52.381 0.00 0.00 30.72 5.40
7479 7866 2.617276 CGAGGAAACCCTAGAAAACCCC 60.617 54.545 0.00 0.00 33.25 4.95
7480 7867 2.039480 ACGAGGAAACCCTAGAAAACCC 59.961 50.000 0.00 0.00 33.25 4.11
7481 7868 3.413846 ACGAGGAAACCCTAGAAAACC 57.586 47.619 0.00 0.00 33.25 3.27
7482 7869 4.383173 TGAACGAGGAAACCCTAGAAAAC 58.617 43.478 0.00 0.00 33.25 2.43
7483 7870 4.693042 TGAACGAGGAAACCCTAGAAAA 57.307 40.909 0.00 0.00 33.25 2.29
7484 7871 4.102054 AGTTGAACGAGGAAACCCTAGAAA 59.898 41.667 0.00 0.00 33.25 2.52
7485 7872 3.644738 AGTTGAACGAGGAAACCCTAGAA 59.355 43.478 0.00 0.00 33.25 2.10
7486 7873 3.236896 AGTTGAACGAGGAAACCCTAGA 58.763 45.455 0.00 0.00 33.25 2.43
7487 7874 3.679824 AGTTGAACGAGGAAACCCTAG 57.320 47.619 0.00 0.00 33.25 3.02
7488 7875 4.154942 ACTAGTTGAACGAGGAAACCCTA 58.845 43.478 10.14 0.00 33.25 3.53
7489 7876 2.970640 ACTAGTTGAACGAGGAAACCCT 59.029 45.455 10.14 0.00 36.57 4.34
7490 7877 3.324117 GACTAGTTGAACGAGGAAACCC 58.676 50.000 10.14 0.00 0.00 4.11
7491 7878 3.006644 AGGACTAGTTGAACGAGGAAACC 59.993 47.826 10.14 7.50 0.00 3.27
7492 7879 4.022155 AGAGGACTAGTTGAACGAGGAAAC 60.022 45.833 10.14 0.00 0.00 2.78
7493 7880 4.150359 AGAGGACTAGTTGAACGAGGAAA 58.850 43.478 10.14 0.00 0.00 3.13
7494 7881 3.757493 GAGAGGACTAGTTGAACGAGGAA 59.243 47.826 10.14 0.00 0.00 3.36
7495 7882 3.009253 AGAGAGGACTAGTTGAACGAGGA 59.991 47.826 10.14 0.00 0.00 3.71
7496 7883 3.349022 AGAGAGGACTAGTTGAACGAGG 58.651 50.000 10.14 0.00 0.00 4.63
7497 7884 4.698304 AGAAGAGAGGACTAGTTGAACGAG 59.302 45.833 3.84 3.84 0.00 4.18
7498 7885 4.456222 CAGAAGAGAGGACTAGTTGAACGA 59.544 45.833 0.00 0.00 0.00 3.85
7499 7886 4.380023 CCAGAAGAGAGGACTAGTTGAACG 60.380 50.000 0.00 0.00 0.00 3.95
7500 7887 4.081917 CCCAGAAGAGAGGACTAGTTGAAC 60.082 50.000 0.00 0.00 0.00 3.18
7501 7888 4.090090 CCCAGAAGAGAGGACTAGTTGAA 58.910 47.826 0.00 0.00 0.00 2.69
7502 7889 3.564571 CCCCAGAAGAGAGGACTAGTTGA 60.565 52.174 0.00 0.00 0.00 3.18
7503 7890 2.763448 CCCCAGAAGAGAGGACTAGTTG 59.237 54.545 0.00 0.00 0.00 3.16
7504 7891 2.292587 CCCCCAGAAGAGAGGACTAGTT 60.293 54.545 0.00 0.00 0.00 2.24
7505 7892 1.289530 CCCCCAGAAGAGAGGACTAGT 59.710 57.143 0.00 0.00 0.00 2.57
7506 7893 2.032151 GCCCCCAGAAGAGAGGACTAG 61.032 61.905 0.00 0.00 0.00 2.57
7507 7894 0.032017 GCCCCCAGAAGAGAGGACTA 60.032 60.000 0.00 0.00 0.00 2.59
7508 7895 1.306568 GCCCCCAGAAGAGAGGACT 60.307 63.158 0.00 0.00 0.00 3.85
7509 7896 1.306568 AGCCCCCAGAAGAGAGGAC 60.307 63.158 0.00 0.00 0.00 3.85
7510 7897 1.306482 CAGCCCCCAGAAGAGAGGA 60.306 63.158 0.00 0.00 0.00 3.71
7511 7898 2.373707 CCAGCCCCCAGAAGAGAGG 61.374 68.421 0.00 0.00 0.00 3.69
7512 7899 0.325671 TACCAGCCCCCAGAAGAGAG 60.326 60.000 0.00 0.00 0.00 3.20
7513 7900 0.325671 CTACCAGCCCCCAGAAGAGA 60.326 60.000 0.00 0.00 0.00 3.10
7514 7901 0.325671 TCTACCAGCCCCCAGAAGAG 60.326 60.000 0.00 0.00 0.00 2.85
7515 7902 0.343372 ATCTACCAGCCCCCAGAAGA 59.657 55.000 0.00 0.00 0.00 2.87
7516 7903 0.761802 GATCTACCAGCCCCCAGAAG 59.238 60.000 0.00 0.00 0.00 2.85
7517 7904 1.048724 CGATCTACCAGCCCCCAGAA 61.049 60.000 0.00 0.00 0.00 3.02
7518 7905 1.457643 CGATCTACCAGCCCCCAGA 60.458 63.158 0.00 0.00 0.00 3.86
7519 7906 0.833834 ATCGATCTACCAGCCCCCAG 60.834 60.000 0.00 0.00 0.00 4.45
7520 7907 0.832135 GATCGATCTACCAGCCCCCA 60.832 60.000 18.29 0.00 0.00 4.96
7521 7908 0.543174 AGATCGATCTACCAGCCCCC 60.543 60.000 26.27 0.00 34.85 5.40
7522 7909 0.605589 CAGATCGATCTACCAGCCCC 59.394 60.000 26.87 0.00 34.85 5.80
7523 7910 0.037790 GCAGATCGATCTACCAGCCC 60.038 60.000 26.87 6.69 34.85 5.19
7524 7911 0.037790 GGCAGATCGATCTACCAGCC 60.038 60.000 31.58 29.98 39.65 4.85
7525 7912 0.037790 GGGCAGATCGATCTACCAGC 60.038 60.000 35.03 28.25 41.29 4.85
7526 7913 1.626686 AGGGCAGATCGATCTACCAG 58.373 55.000 35.03 21.84 41.29 4.00
7527 7914 2.971901 TAGGGCAGATCGATCTACCA 57.028 50.000 35.03 19.95 41.29 3.25
7536 7923 3.118956 CCATCCTTACGATAGGGCAGATC 60.119 52.174 7.54 0.00 43.77 2.75
7537 7924 2.834549 CCATCCTTACGATAGGGCAGAT 59.165 50.000 7.54 0.00 43.77 2.90
7538 7925 2.248248 CCATCCTTACGATAGGGCAGA 58.752 52.381 7.54 0.00 43.77 4.26
7539 7926 1.338200 GCCATCCTTACGATAGGGCAG 60.338 57.143 7.54 0.00 39.05 4.85
7540 7927 0.685097 GCCATCCTTACGATAGGGCA 59.315 55.000 7.54 0.00 39.05 5.36
7541 7928 0.685097 TGCCATCCTTACGATAGGGC 59.315 55.000 7.54 0.00 39.47 5.19
7542 7929 1.338200 GCTGCCATCCTTACGATAGGG 60.338 57.143 7.54 0.00 43.77 3.53
7543 7930 1.344438 TGCTGCCATCCTTACGATAGG 59.656 52.381 0.00 0.00 43.77 2.57
7544 7931 2.408050 GTGCTGCCATCCTTACGATAG 58.592 52.381 0.00 0.00 46.19 2.08
7545 7932 1.269569 CGTGCTGCCATCCTTACGATA 60.270 52.381 0.00 0.00 33.78 2.92
7546 7933 0.530650 CGTGCTGCCATCCTTACGAT 60.531 55.000 0.00 0.00 33.78 3.73
7547 7934 1.153647 CGTGCTGCCATCCTTACGA 60.154 57.895 0.00 0.00 33.78 3.43
7548 7935 2.813179 GCGTGCTGCCATCCTTACG 61.813 63.158 0.00 0.00 37.76 3.18
7549 7936 2.813179 CGCGTGCTGCCATCCTTAC 61.813 63.158 0.00 0.00 42.08 2.34
7550 7937 2.511373 CGCGTGCTGCCATCCTTA 60.511 61.111 0.00 0.00 42.08 2.69
7567 7954 3.202706 GAATGCCGAAGACCCGCC 61.203 66.667 0.00 0.00 0.00 6.13
7568 7955 3.564027 CGAATGCCGAAGACCCGC 61.564 66.667 0.00 0.00 41.76 6.13
7569 7956 2.890474 CCGAATGCCGAAGACCCG 60.890 66.667 0.00 0.00 41.76 5.28
7570 7957 3.202706 GCCGAATGCCGAAGACCC 61.203 66.667 0.00 0.00 41.76 4.46
7571 7958 2.038269 TTGCCGAATGCCGAAGACC 61.038 57.895 0.00 0.00 41.76 3.85
7572 7959 1.134694 GTTGCCGAATGCCGAAGAC 59.865 57.895 0.00 0.00 41.76 3.01
7573 7960 0.886938 TTGTTGCCGAATGCCGAAGA 60.887 50.000 0.00 0.00 41.76 2.87
7574 7961 0.039617 TTTGTTGCCGAATGCCGAAG 60.040 50.000 0.00 0.00 41.76 3.79
7575 7962 0.039617 CTTTGTTGCCGAATGCCGAA 60.040 50.000 0.00 0.00 41.76 4.30
7576 7963 1.578926 CTTTGTTGCCGAATGCCGA 59.421 52.632 0.00 0.00 41.76 5.54
7577 7964 1.444212 CCTTTGTTGCCGAATGCCG 60.444 57.895 0.00 0.00 40.16 5.69
7578 7965 1.079888 CCCTTTGTTGCCGAATGCC 60.080 57.895 0.00 0.00 40.16 4.40
7579 7966 0.316841 TTCCCTTTGTTGCCGAATGC 59.683 50.000 0.00 0.00 41.77 3.56
7580 7967 1.067635 CCTTCCCTTTGTTGCCGAATG 60.068 52.381 0.00 0.00 0.00 2.67
7581 7968 1.256812 CCTTCCCTTTGTTGCCGAAT 58.743 50.000 0.00 0.00 0.00 3.34
7582 7969 0.825840 CCCTTCCCTTTGTTGCCGAA 60.826 55.000 0.00 0.00 0.00 4.30
7583 7970 1.228429 CCCTTCCCTTTGTTGCCGA 60.228 57.895 0.00 0.00 0.00 5.54
7584 7971 2.275380 CCCCTTCCCTTTGTTGCCG 61.275 63.158 0.00 0.00 0.00 5.69
7585 7972 0.471022 TTCCCCTTCCCTTTGTTGCC 60.471 55.000 0.00 0.00 0.00 4.52
7586 7973 0.969149 CTTCCCCTTCCCTTTGTTGC 59.031 55.000 0.00 0.00 0.00 4.17
7587 7974 2.675658 TCTTCCCCTTCCCTTTGTTG 57.324 50.000 0.00 0.00 0.00 3.33
7588 7975 2.290960 CGATCTTCCCCTTCCCTTTGTT 60.291 50.000 0.00 0.00 0.00 2.83
7589 7976 1.282157 CGATCTTCCCCTTCCCTTTGT 59.718 52.381 0.00 0.00 0.00 2.83
7590 7977 1.559682 TCGATCTTCCCCTTCCCTTTG 59.440 52.381 0.00 0.00 0.00 2.77
7591 7978 1.840635 CTCGATCTTCCCCTTCCCTTT 59.159 52.381 0.00 0.00 0.00 3.11
7592 7979 1.501582 CTCGATCTTCCCCTTCCCTT 58.498 55.000 0.00 0.00 0.00 3.95
7593 7980 0.399233 CCTCGATCTTCCCCTTCCCT 60.399 60.000 0.00 0.00 0.00 4.20
7594 7981 0.398664 TCCTCGATCTTCCCCTTCCC 60.399 60.000 0.00 0.00 0.00 3.97
7595 7982 1.621317 GATCCTCGATCTTCCCCTTCC 59.379 57.143 0.00 0.00 36.27 3.46
7596 7983 2.604139 AGATCCTCGATCTTCCCCTTC 58.396 52.381 0.00 0.00 45.86 3.46
7597 7984 2.785357 AGATCCTCGATCTTCCCCTT 57.215 50.000 0.00 0.00 45.86 3.95
7605 7992 5.841810 AGTTCTTTCATGAGATCCTCGATC 58.158 41.667 0.00 0.00 39.17 3.69
7606 7993 5.867903 AGTTCTTTCATGAGATCCTCGAT 57.132 39.130 0.00 0.00 32.35 3.59
7607 7994 5.185828 TCAAGTTCTTTCATGAGATCCTCGA 59.814 40.000 0.00 0.00 32.35 4.04
7608 7995 5.290643 GTCAAGTTCTTTCATGAGATCCTCG 59.709 44.000 0.00 0.00 32.35 4.63
7609 7996 5.584251 GGTCAAGTTCTTTCATGAGATCCTC 59.416 44.000 0.00 0.00 0.00 3.71
7610 7997 5.250313 AGGTCAAGTTCTTTCATGAGATCCT 59.750 40.000 0.00 0.00 0.00 3.24
7611 7998 5.353678 CAGGTCAAGTTCTTTCATGAGATCC 59.646 44.000 0.00 0.00 0.00 3.36
7612 7999 6.169094 TCAGGTCAAGTTCTTTCATGAGATC 58.831 40.000 0.00 0.00 0.00 2.75
7613 8000 6.119240 TCAGGTCAAGTTCTTTCATGAGAT 57.881 37.500 0.00 0.00 0.00 2.75
7614 8001 5.551305 TCAGGTCAAGTTCTTTCATGAGA 57.449 39.130 0.00 0.00 0.00 3.27
7615 8002 5.180868 CCTTCAGGTCAAGTTCTTTCATGAG 59.819 44.000 0.00 0.00 0.00 2.90
7616 8003 5.065914 CCTTCAGGTCAAGTTCTTTCATGA 58.934 41.667 0.00 0.00 0.00 3.07
7617 8004 5.065914 TCCTTCAGGTCAAGTTCTTTCATG 58.934 41.667 0.00 0.00 36.34 3.07
7618 8005 5.310409 TCCTTCAGGTCAAGTTCTTTCAT 57.690 39.130 0.00 0.00 36.34 2.57
7619 8006 4.444876 CCTCCTTCAGGTCAAGTTCTTTCA 60.445 45.833 0.00 0.00 37.53 2.69
7620 8007 4.068599 CCTCCTTCAGGTCAAGTTCTTTC 58.931 47.826 0.00 0.00 37.53 2.62
7621 8008 3.716872 TCCTCCTTCAGGTCAAGTTCTTT 59.283 43.478 0.00 0.00 43.95 2.52
7622 8009 3.318313 TCCTCCTTCAGGTCAAGTTCTT 58.682 45.455 0.00 0.00 43.95 2.52
7623 8010 2.977808 TCCTCCTTCAGGTCAAGTTCT 58.022 47.619 0.00 0.00 43.95 3.01
7624 8011 3.261897 TCATCCTCCTTCAGGTCAAGTTC 59.738 47.826 0.00 0.00 43.95 3.01
7625 8012 3.251484 TCATCCTCCTTCAGGTCAAGTT 58.749 45.455 0.00 0.00 43.95 2.66
7626 8013 2.907892 TCATCCTCCTTCAGGTCAAGT 58.092 47.619 0.00 0.00 43.95 3.16
7627 8014 3.710677 AGATCATCCTCCTTCAGGTCAAG 59.289 47.826 0.00 0.00 43.95 3.02
7628 8015 3.729108 AGATCATCCTCCTTCAGGTCAA 58.271 45.455 0.00 0.00 43.95 3.18
7629 8016 3.411454 AGATCATCCTCCTTCAGGTCA 57.589 47.619 0.00 0.00 43.95 4.02
7630 8017 3.708631 TCAAGATCATCCTCCTTCAGGTC 59.291 47.826 0.00 0.00 43.95 3.85
7631 8018 3.729108 TCAAGATCATCCTCCTTCAGGT 58.271 45.455 0.00 0.00 43.95 4.00
7632 8019 4.347292 TCATCAAGATCATCCTCCTTCAGG 59.653 45.833 0.00 0.00 45.15 3.86
7633 8020 5.548181 TCATCAAGATCATCCTCCTTCAG 57.452 43.478 0.00 0.00 0.00 3.02
7634 8021 5.368816 ACATCATCAAGATCATCCTCCTTCA 59.631 40.000 0.00 0.00 33.72 3.02
7635 8022 5.701750 CACATCATCAAGATCATCCTCCTTC 59.298 44.000 0.00 0.00 33.72 3.46
7636 8023 5.456330 CCACATCATCAAGATCATCCTCCTT 60.456 44.000 0.00 0.00 33.72 3.36
7637 8024 4.041815 CCACATCATCAAGATCATCCTCCT 59.958 45.833 0.00 0.00 33.72 3.69
7638 8025 4.202440 ACCACATCATCAAGATCATCCTCC 60.202 45.833 0.00 0.00 33.72 4.30
7639 8026 4.755629 CACCACATCATCAAGATCATCCTC 59.244 45.833 0.00 0.00 33.72 3.71
7640 8027 4.165565 ACACCACATCATCAAGATCATCCT 59.834 41.667 0.00 0.00 33.72 3.24
7641 8028 4.458397 ACACCACATCATCAAGATCATCC 58.542 43.478 0.00 0.00 33.72 3.51
7642 8029 6.094464 TCAAACACCACATCATCAAGATCATC 59.906 38.462 0.00 0.00 33.72 2.92
7643 8030 5.947566 TCAAACACCACATCATCAAGATCAT 59.052 36.000 0.00 0.00 33.72 2.45
7644 8031 5.315348 TCAAACACCACATCATCAAGATCA 58.685 37.500 0.00 0.00 33.72 2.92
7645 8032 5.163683 CCTCAAACACCACATCATCAAGATC 60.164 44.000 0.00 0.00 33.72 2.75
7646 8033 4.703575 CCTCAAACACCACATCATCAAGAT 59.296 41.667 0.00 0.00 37.48 2.40
7647 8034 4.074259 CCTCAAACACCACATCATCAAGA 58.926 43.478 0.00 0.00 0.00 3.02
7648 8035 4.074259 TCCTCAAACACCACATCATCAAG 58.926 43.478 0.00 0.00 0.00 3.02
7649 8036 4.074259 CTCCTCAAACACCACATCATCAA 58.926 43.478 0.00 0.00 0.00 2.57
7650 8037 3.559811 CCTCCTCAAACACCACATCATCA 60.560 47.826 0.00 0.00 0.00 3.07
7651 8038 3.012518 CCTCCTCAAACACCACATCATC 58.987 50.000 0.00 0.00 0.00 2.92
7652 8039 2.644299 TCCTCCTCAAACACCACATCAT 59.356 45.455 0.00 0.00 0.00 2.45
7653 8040 2.038952 CTCCTCCTCAAACACCACATCA 59.961 50.000 0.00 0.00 0.00 3.07
7654 8041 2.616510 CCTCCTCCTCAAACACCACATC 60.617 54.545 0.00 0.00 0.00 3.06
7655 8042 1.352352 CCTCCTCCTCAAACACCACAT 59.648 52.381 0.00 0.00 0.00 3.21
7656 8043 0.764890 CCTCCTCCTCAAACACCACA 59.235 55.000 0.00 0.00 0.00 4.17
7657 8044 1.056660 TCCTCCTCCTCAAACACCAC 58.943 55.000 0.00 0.00 0.00 4.16
7658 8045 1.630369 CATCCTCCTCCTCAAACACCA 59.370 52.381 0.00 0.00 0.00 4.17
7659 8046 1.680249 GCATCCTCCTCCTCAAACACC 60.680 57.143 0.00 0.00 0.00 4.16
7660 8047 1.680249 GGCATCCTCCTCCTCAAACAC 60.680 57.143 0.00 0.00 0.00 3.32
7661 8048 0.620556 GGCATCCTCCTCCTCAAACA 59.379 55.000 0.00 0.00 0.00 2.83
7662 8049 0.106967 GGGCATCCTCCTCCTCAAAC 60.107 60.000 0.00 0.00 0.00 2.93
7663 8050 1.281925 GGGGCATCCTCCTCCTCAAA 61.282 60.000 0.00 0.00 0.00 2.69
7664 8051 1.694169 GGGGCATCCTCCTCCTCAA 60.694 63.158 0.00 0.00 0.00 3.02
7665 8052 2.040464 GGGGCATCCTCCTCCTCA 60.040 66.667 0.00 0.00 0.00 3.86
7666 8053 3.237741 CGGGGCATCCTCCTCCTC 61.238 72.222 0.00 0.00 0.00 3.71
7667 8054 4.095400 ACGGGGCATCCTCCTCCT 62.095 66.667 0.00 0.00 0.00 3.69
7668 8055 3.551407 GACGGGGCATCCTCCTCC 61.551 72.222 0.00 0.00 0.00 4.30
7669 8056 2.764128 TGACGGGGCATCCTCCTC 60.764 66.667 0.00 0.00 0.00 3.71
7670 8057 2.765807 CTGACGGGGCATCCTCCT 60.766 66.667 0.00 0.00 0.00 3.69
7671 8058 1.910580 TTTCTGACGGGGCATCCTCC 61.911 60.000 0.00 0.00 0.00 4.30
7672 8059 0.035439 TTTTCTGACGGGGCATCCTC 60.035 55.000 0.00 0.00 0.00 3.71
7673 8060 0.035056 CTTTTCTGACGGGGCATCCT 60.035 55.000 0.00 0.00 0.00 3.24
7674 8061 0.035439 TCTTTTCTGACGGGGCATCC 60.035 55.000 0.00 0.00 0.00 3.51
7675 8062 1.468914 GTTCTTTTCTGACGGGGCATC 59.531 52.381 0.00 0.00 0.00 3.91
7676 8063 1.534729 GTTCTTTTCTGACGGGGCAT 58.465 50.000 0.00 0.00 0.00 4.40
7677 8064 0.536460 GGTTCTTTTCTGACGGGGCA 60.536 55.000 0.00 0.00 0.00 5.36
7678 8065 0.250770 AGGTTCTTTTCTGACGGGGC 60.251 55.000 0.00 0.00 0.00 5.80
7679 8066 1.809684 GAGGTTCTTTTCTGACGGGG 58.190 55.000 0.00 0.00 0.00 5.73
7680 8067 1.429463 CGAGGTTCTTTTCTGACGGG 58.571 55.000 0.00 0.00 0.00 5.28
7681 8068 1.429463 CCGAGGTTCTTTTCTGACGG 58.571 55.000 0.00 0.00 0.00 4.79
7682 8069 1.270147 ACCCGAGGTTCTTTTCTGACG 60.270 52.381 0.00 0.00 27.29 4.35
7683 8070 2.143925 CACCCGAGGTTCTTTTCTGAC 58.856 52.381 0.00 0.00 31.02 3.51
7684 8071 1.071699 CCACCCGAGGTTCTTTTCTGA 59.928 52.381 0.00 0.00 31.02 3.27
7685 8072 1.071699 TCCACCCGAGGTTCTTTTCTG 59.928 52.381 0.00 0.00 31.02 3.02
7686 8073 1.430992 TCCACCCGAGGTTCTTTTCT 58.569 50.000 0.00 0.00 31.02 2.52
7687 8074 2.084546 CATCCACCCGAGGTTCTTTTC 58.915 52.381 0.00 0.00 31.02 2.29
7688 8075 1.702957 TCATCCACCCGAGGTTCTTTT 59.297 47.619 0.00 0.00 31.02 2.27
7689 8076 1.358152 TCATCCACCCGAGGTTCTTT 58.642 50.000 0.00 0.00 31.02 2.52
7690 8077 1.486726 GATCATCCACCCGAGGTTCTT 59.513 52.381 0.00 0.00 31.02 2.52
7691 8078 1.123928 GATCATCCACCCGAGGTTCT 58.876 55.000 0.00 0.00 31.02 3.01
7692 8079 1.123928 AGATCATCCACCCGAGGTTC 58.876 55.000 0.00 0.00 31.02 3.62
7693 8080 1.210478 CAAGATCATCCACCCGAGGTT 59.790 52.381 0.00 0.00 31.02 3.50
7694 8081 0.833287 CAAGATCATCCACCCGAGGT 59.167 55.000 0.00 0.00 35.62 3.85
7695 8082 0.107456 CCAAGATCATCCACCCGAGG 59.893 60.000 0.00 0.00 0.00 4.63
7696 8083 0.833287 ACCAAGATCATCCACCCGAG 59.167 55.000 0.00 0.00 0.00 4.63
7697 8084 0.541392 CACCAAGATCATCCACCCGA 59.459 55.000 0.00 0.00 0.00 5.14
7698 8085 1.097547 GCACCAAGATCATCCACCCG 61.098 60.000 0.00 0.00 0.00 5.28
7699 8086 1.097547 CGCACCAAGATCATCCACCC 61.098 60.000 0.00 0.00 0.00 4.61
7700 8087 1.097547 CCGCACCAAGATCATCCACC 61.098 60.000 0.00 0.00 0.00 4.61
7701 8088 1.097547 CCCGCACCAAGATCATCCAC 61.098 60.000 0.00 0.00 0.00 4.02
7702 8089 1.224315 CCCGCACCAAGATCATCCA 59.776 57.895 0.00 0.00 0.00 3.41
7703 8090 0.394352 AACCCGCACCAAGATCATCC 60.394 55.000 0.00 0.00 0.00 3.51
7704 8091 1.017387 GAACCCGCACCAAGATCATC 58.983 55.000 0.00 0.00 0.00 2.92
7705 8092 3.175133 GAACCCGCACCAAGATCAT 57.825 52.632 0.00 0.00 0.00 2.45
7706 8093 4.713946 GAACCCGCACCAAGATCA 57.286 55.556 0.00 0.00 0.00 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.