Multiple sequence alignment - TraesCS1B01G386000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G386000 chr1B 100.000 3149 0 0 1 3149 619535111 619538259 0.000000e+00 5816.0
1 TraesCS1B01G386000 chr1B 89.130 1380 146 4 776 2151 619430629 619432008 0.000000e+00 1714.0
2 TraesCS1B01G386000 chr1B 88.325 1242 139 4 721 1956 619544943 619546184 0.000000e+00 1485.0
3 TraesCS1B01G386000 chr1B 82.057 1410 232 18 761 2158 619529573 619530973 0.000000e+00 1182.0
4 TraesCS1B01G386000 chr1B 94.613 724 33 3 1952 2672 619550240 619550960 0.000000e+00 1116.0
5 TraesCS1B01G386000 chr1B 89.676 494 33 5 2665 3140 619581979 619582472 5.770000e-172 614.0
6 TraesCS1B01G386000 chr1B 88.479 434 44 5 90 521 619528848 619529277 1.290000e-143 520.0
7 TraesCS1B01G386000 chr1B 88.451 381 44 0 90 470 619430154 619430534 7.960000e-126 460.0
8 TraesCS1B01G386000 chr1B 85.185 432 64 0 90 521 658915611 658915180 8.010000e-121 444.0
9 TraesCS1B01G386000 chr1B 78.868 265 35 11 596 845 619543485 619543743 3.250000e-35 159.0
10 TraesCS1B01G386000 chr1B 91.262 103 9 0 596 698 619585819 619585921 1.180000e-29 141.0
11 TraesCS1B01G386000 chr1B 96.875 32 0 1 666 696 619544520 619544551 6.000000e-03 52.8
12 TraesCS1B01G386000 chr1A 86.728 2170 207 41 33 2158 545907456 545909588 0.000000e+00 2337.0
13 TraesCS1B01G386000 chr1A 81.871 1208 202 14 962 2158 545897060 545898261 0.000000e+00 1002.0
14 TraesCS1B01G386000 chr1A 90.741 432 40 0 90 521 545896246 545896677 7.570000e-161 577.0
15 TraesCS1B01G386000 chr1A 84.954 432 65 0 90 521 568109046 568108615 3.730000e-119 438.0
16 TraesCS1B01G386000 chr1A 89.427 227 24 0 295 521 516149412 516149186 1.430000e-73 287.0
17 TraesCS1B01G386000 chr1A 87.755 196 13 6 2154 2344 545909628 545909817 5.290000e-53 219.0
18 TraesCS1B01G386000 chr1D 85.917 2187 215 46 1 2151 451194507 451196636 0.000000e+00 2246.0
19 TraesCS1B01G386000 chr1D 83.627 1588 228 23 596 2158 451244086 451245666 0.000000e+00 1463.0
20 TraesCS1B01G386000 chr1D 83.357 1394 218 13 774 2158 451140974 451142362 0.000000e+00 1277.0
21 TraesCS1B01G386000 chr1D 89.815 432 44 0 90 521 451140249 451140680 3.550000e-154 555.0
22 TraesCS1B01G386000 chr1D 84.491 432 67 0 90 521 473863187 473862756 8.070000e-116 427.0
23 TraesCS1B01G386000 chr6D 89.868 227 23 0 295 521 318999484 318999258 3.070000e-75 292.0
24 TraesCS1B01G386000 chr2B 77.193 342 67 10 1817 2151 517746628 517746965 4.150000e-44 189.0
25 TraesCS1B01G386000 chrUn 77.778 297 57 8 1861 2151 444720202 444719909 1.160000e-39 174.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G386000 chr1B 619535111 619538259 3148 False 5816.0 5816 100.000000 1 3149 1 chr1B.!!$F1 3148
1 TraesCS1B01G386000 chr1B 619550240 619550960 720 False 1116.0 1116 94.613000 1952 2672 1 chr1B.!!$F2 720
2 TraesCS1B01G386000 chr1B 619430154 619432008 1854 False 1087.0 1714 88.790500 90 2151 2 chr1B.!!$F3 2061
3 TraesCS1B01G386000 chr1B 619528848 619530973 2125 False 851.0 1182 85.268000 90 2158 2 chr1B.!!$F4 2068
4 TraesCS1B01G386000 chr1B 619543485 619546184 2699 False 565.6 1485 88.022667 596 1956 3 chr1B.!!$F5 1360
5 TraesCS1B01G386000 chr1B 619581979 619585921 3942 False 377.5 614 90.469000 596 3140 2 chr1B.!!$F6 2544
6 TraesCS1B01G386000 chr1A 545907456 545909817 2361 False 1278.0 2337 87.241500 33 2344 2 chr1A.!!$F2 2311
7 TraesCS1B01G386000 chr1A 545896246 545898261 2015 False 789.5 1002 86.306000 90 2158 2 chr1A.!!$F1 2068
8 TraesCS1B01G386000 chr1D 451194507 451196636 2129 False 2246.0 2246 85.917000 1 2151 1 chr1D.!!$F1 2150
9 TraesCS1B01G386000 chr1D 451244086 451245666 1580 False 1463.0 1463 83.627000 596 2158 1 chr1D.!!$F2 1562
10 TraesCS1B01G386000 chr1D 451140249 451142362 2113 False 916.0 1277 86.586000 90 2158 2 chr1D.!!$F3 2068

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
547 570 0.094901 AACGACGACGACGAGATGAG 59.905 55.0 25.15 1.18 42.66 2.90 F
1379 5452 0.322546 ATTCGTCCAGGGAAAGGTGC 60.323 55.0 0.00 0.00 0.00 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1731 5815 0.753262 ATGTAGCGCCCTCGAGAATT 59.247 50.0 15.71 0.0 38.1 2.17 R
2748 6884 0.032540 GTACGGACGTTGTGGGAGTT 59.967 55.0 1.57 0.0 0.0 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 3.842923 CGGCGACAGAGATGCCCT 61.843 66.667 0.00 0.00 46.12 5.19
29 30 2.107953 GGCGACAGAGATGCCCTC 59.892 66.667 0.00 0.00 43.06 4.30
31 32 1.227205 GCGACAGAGATGCCCTCAG 60.227 63.158 6.08 0.98 44.40 3.35
84 85 9.868277 CATGGTAAATAAAATTAAGAGTTGCCA 57.132 29.630 6.62 6.62 34.48 4.92
97 103 1.037579 GTTGCCATACTCCCTTGGGC 61.038 60.000 0.00 0.00 44.82 5.36
223 229 4.250305 ACGTGGAAGGCGGCAACT 62.250 61.111 13.08 0.00 0.00 3.16
243 249 2.503061 CCTGGAGTCCATGAGCCG 59.497 66.667 13.56 0.00 30.82 5.52
521 544 1.171308 GTGGTAGTACTCGTCCTGCA 58.829 55.000 0.00 0.00 0.00 4.41
522 545 1.135460 GTGGTAGTACTCGTCCTGCAC 60.135 57.143 0.00 0.00 0.00 4.57
530 553 3.041940 CGTCCTGCACGGGTCAAC 61.042 66.667 0.00 0.00 45.46 3.18
531 554 3.041940 GTCCTGCACGGGTCAACG 61.042 66.667 0.00 0.00 40.31 4.10
532 555 3.228017 TCCTGCACGGGTCAACGA 61.228 61.111 0.00 0.00 37.61 3.85
533 556 3.041940 CCTGCACGGGTCAACGAC 61.042 66.667 0.00 0.00 37.61 4.34
534 557 3.403057 CTGCACGGGTCAACGACG 61.403 66.667 0.00 0.00 37.61 5.12
535 558 3.834447 CTGCACGGGTCAACGACGA 62.834 63.158 0.00 0.00 37.61 4.20
536 559 3.400590 GCACGGGTCAACGACGAC 61.401 66.667 0.00 0.00 37.61 4.34
537 560 3.095278 CACGGGTCAACGACGACG 61.095 66.667 5.58 5.58 45.75 5.12
539 562 2.798262 CGGGTCAACGACGACGAC 60.798 66.667 15.32 7.36 42.66 4.34
540 563 2.798262 GGGTCAACGACGACGACG 60.798 66.667 17.60 17.60 42.66 5.12
542 565 1.791283 GGTCAACGACGACGACGAG 60.791 63.158 25.15 16.38 42.66 4.18
543 566 1.202568 GTCAACGACGACGACGAGA 59.797 57.895 25.15 18.18 42.66 4.04
544 567 0.179230 GTCAACGACGACGACGAGAT 60.179 55.000 25.15 8.82 42.66 2.75
547 570 0.094901 AACGACGACGACGAGATGAG 59.905 55.000 25.15 1.18 42.66 2.90
549 572 1.648756 GACGACGACGAGATGAGCG 60.649 63.158 15.32 0.00 42.66 5.03
550 573 2.021964 GACGACGACGAGATGAGCGA 62.022 60.000 15.32 0.00 42.66 4.93
551 574 1.277142 CGACGACGAGATGAGCGAT 59.723 57.895 0.00 0.00 42.66 4.58
553 576 0.719846 GACGACGAGATGAGCGATCG 60.720 60.000 11.69 11.69 42.04 3.69
556 579 2.099143 ACGAGATGAGCGATCGTGT 58.901 52.632 17.81 0.00 46.99 4.49
557 580 0.452184 ACGAGATGAGCGATCGTGTT 59.548 50.000 17.81 2.62 46.99 3.32
559 582 1.253800 CGAGATGAGCGATCGTGTTTG 59.746 52.381 17.81 0.00 36.04 2.93
560 583 2.530177 GAGATGAGCGATCGTGTTTGA 58.470 47.619 17.81 0.00 36.04 2.69
561 584 3.119291 GAGATGAGCGATCGTGTTTGAT 58.881 45.455 17.81 0.01 36.04 2.57
564 587 1.731709 TGAGCGATCGTGTTTGATTGG 59.268 47.619 17.81 0.00 31.51 3.16
565 588 1.062587 GAGCGATCGTGTTTGATTGGG 59.937 52.381 17.81 0.00 31.51 4.12
567 590 1.086696 CGATCGTGTTTGATTGGGCT 58.913 50.000 7.03 0.00 0.00 5.19
568 591 1.062587 CGATCGTGTTTGATTGGGCTC 59.937 52.381 7.03 0.00 0.00 4.70
569 592 1.062587 GATCGTGTTTGATTGGGCTCG 59.937 52.381 0.00 0.00 0.00 5.03
570 593 1.154225 CGTGTTTGATTGGGCTCGC 60.154 57.895 0.00 0.00 0.00 5.03
571 594 1.154225 GTGTTTGATTGGGCTCGCG 60.154 57.895 0.00 0.00 0.00 5.87
572 595 2.202479 GTTTGATTGGGCTCGCGC 60.202 61.111 0.00 0.00 0.00 6.86
573 596 3.798650 TTTGATTGGGCTCGCGCG 61.799 61.111 26.76 26.76 36.88 6.86
587 610 2.731721 CGCGTCGGTGCAACAGTA 60.732 61.111 0.98 0.00 39.98 2.74
590 613 1.850640 CGTCGGTGCAACAGTACAC 59.149 57.895 0.98 0.00 39.98 2.90
591 614 1.850640 GTCGGTGCAACAGTACACG 59.149 57.895 0.98 0.00 39.98 4.49
592 615 1.300311 TCGGTGCAACAGTACACGG 60.300 57.895 0.98 7.52 39.98 4.94
593 616 1.593209 CGGTGCAACAGTACACGGT 60.593 57.895 0.98 0.00 39.98 4.83
594 617 1.155424 CGGTGCAACAGTACACGGTT 61.155 55.000 0.98 0.00 39.98 4.44
632 4245 0.599204 TGCGACTCAAACTCGGGAAC 60.599 55.000 0.00 0.00 0.00 3.62
710 4705 6.323225 CCAACCTATCCTTATATACGTAGGGG 59.677 46.154 0.08 0.00 34.41 4.79
808 4866 2.137528 TGGTCAGAACTCCCGCACA 61.138 57.895 0.00 0.00 0.00 4.57
825 4883 2.351157 GCACAACGTACTAGACCTCGTT 60.351 50.000 0.00 5.09 45.16 3.85
837 4895 1.299165 CCTCGTTATCGACCGCCTG 60.299 63.158 0.00 0.00 41.35 4.85
853 4911 1.307343 CTGGTGTCCTCCCCTCCAT 60.307 63.158 0.00 0.00 0.00 3.41
875 4933 2.585876 GAGGCTTCTTCTCCTCGGT 58.414 57.895 0.00 0.00 39.43 4.69
889 4947 4.337060 CGGTGTGGTCGCGAGTCA 62.337 66.667 10.24 8.76 0.00 3.41
891 4949 2.430921 GTGTGGTCGCGAGTCAGG 60.431 66.667 10.24 0.00 0.00 3.86
893 4951 4.357947 GTGGTCGCGAGTCAGGCA 62.358 66.667 10.24 0.00 0.00 4.75
897 4955 3.684990 TCGCGAGTCAGGCAGCTT 61.685 61.111 3.71 0.00 0.00 3.74
903 4961 1.303155 AGTCAGGCAGCTTCTTGGC 60.303 57.895 0.00 0.00 43.41 4.52
908 4966 2.651071 GGCAGCTTCTTGGCTTCTT 58.349 52.632 0.00 0.00 41.00 2.52
914 4981 0.801251 CTTCTTGGCTTCTTCGCTGG 59.199 55.000 0.00 0.00 0.00 4.85
916 4983 2.672996 TTGGCTTCTTCGCTGGCC 60.673 61.111 0.00 0.00 44.31 5.36
920 4987 2.510238 CTTCTTCGCTGGCCTCGG 60.510 66.667 15.91 2.81 0.00 4.63
921 4988 2.994995 TTCTTCGCTGGCCTCGGA 60.995 61.111 15.91 8.22 0.00 4.55
951 5021 4.436998 GACCGACACTGGGCCTCG 62.437 72.222 4.53 5.38 0.00 4.63
952 5025 4.988716 ACCGACACTGGGCCTCGA 62.989 66.667 13.81 0.00 0.00 4.04
953 5026 3.461773 CCGACACTGGGCCTCGAT 61.462 66.667 13.81 0.00 0.00 3.59
957 5030 2.105128 CACTGGGCCTCGATCGAC 59.895 66.667 15.15 5.35 0.00 4.20
959 5032 3.147595 CTGGGCCTCGATCGACCA 61.148 66.667 22.09 21.46 0.00 4.02
960 5033 3.432051 CTGGGCCTCGATCGACCAC 62.432 68.421 22.09 14.62 0.00 4.16
969 5042 1.805945 GATCGACCACGCTCGCTTT 60.806 57.895 0.00 0.00 39.58 3.51
970 5043 2.014093 GATCGACCACGCTCGCTTTG 62.014 60.000 0.00 0.00 39.58 2.77
992 5065 2.860293 GGTGTGTCGTTCATGGCG 59.140 61.111 0.00 0.00 0.00 5.69
996 5069 0.599060 TGTGTCGTTCATGGCGTCTA 59.401 50.000 9.65 0.00 0.00 2.59
1030 5103 1.944024 ACGTTTTGATTTCACGGCAGA 59.056 42.857 0.00 0.00 38.26 4.26
1050 5123 4.509230 CAGATACCTTGGATTGTCATGTCG 59.491 45.833 0.00 0.00 0.00 4.35
1053 5126 2.239654 ACCTTGGATTGTCATGTCGGAT 59.760 45.455 0.00 0.00 0.00 4.18
1064 5137 0.537188 ATGTCGGATGGCTCGTTCTT 59.463 50.000 0.00 0.00 0.00 2.52
1075 5148 1.602165 GCTCGTTCTTCACACCTTCGA 60.602 52.381 0.00 0.00 0.00 3.71
1095 5168 1.815421 CGCTATTTGCACCTCGCCT 60.815 57.895 0.00 0.00 43.06 5.52
1106 5179 4.824515 CTCGCCTCCCCGTCTCCT 62.825 72.222 0.00 0.00 0.00 3.69
1118 5191 1.761174 GTCTCCTCACCTTGCCCAA 59.239 57.895 0.00 0.00 0.00 4.12
1136 5209 2.032722 CCAACAACACAACATGCATTGC 60.033 45.455 0.00 0.46 32.47 3.56
1143 5216 0.457166 CAACATGCATTGCCTCCACG 60.457 55.000 6.12 0.00 0.00 4.94
1197 5270 3.986572 CCAAGAAGATGCATAGCTACTCG 59.013 47.826 0.00 0.00 0.00 4.18
1231 5304 2.261361 CTGGCATCACCGTGTCGA 59.739 61.111 0.00 0.00 43.94 4.20
1247 5320 2.567169 TGTCGATTCCTGAGTTGGATGT 59.433 45.455 0.00 0.00 35.83 3.06
1254 5327 5.497464 TTCCTGAGTTGGATGTTGTCATA 57.503 39.130 0.00 0.00 35.83 2.15
1320 5393 1.005394 AACGCCTTCGGACATCGTT 60.005 52.632 5.03 5.03 40.69 3.85
1362 5435 4.482025 TGGAATCACCCCCTCATCTTAATT 59.518 41.667 0.00 0.00 38.00 1.40
1379 5452 0.322546 ATTCGTCCAGGGAAAGGTGC 60.323 55.000 0.00 0.00 0.00 5.01
1419 5492 3.340814 AGTGCTCCTTTCATCGACATT 57.659 42.857 0.00 0.00 0.00 2.71
1475 5548 1.326213 ATCACTGAGGCAGAGGACCG 61.326 60.000 0.82 0.00 35.18 4.79
1477 5550 0.965866 CACTGAGGCAGAGGACCGTA 60.966 60.000 0.82 0.00 35.18 4.02
1556 5637 1.613928 TCATTAGGCACCCACCGGA 60.614 57.895 9.46 0.00 33.69 5.14
1613 5694 5.106555 ACGATAACTTTGATTCCAGCAACAG 60.107 40.000 0.00 0.00 0.00 3.16
1623 5704 1.985159 TCCAGCAACAGTGATAAGGGT 59.015 47.619 0.00 0.00 0.00 4.34
1624 5705 2.375174 TCCAGCAACAGTGATAAGGGTT 59.625 45.455 0.00 0.00 0.00 4.11
1629 5710 5.240623 CAGCAACAGTGATAAGGGTTGTAAA 59.759 40.000 0.00 0.00 41.89 2.01
1634 5715 6.779860 ACAGTGATAAGGGTTGTAAAGATGT 58.220 36.000 0.00 0.00 0.00 3.06
1731 5815 4.681744 GAAAGAAAATTGGCGATGGCATA 58.318 39.130 0.00 0.00 42.47 3.14
1794 5878 8.328758 GTTCCATATGAACCCAAGGATATCATA 58.671 37.037 3.65 9.36 46.35 2.15
1805 5889 6.240263 CCCAAGGATATCATAACCCTCATTCA 60.240 42.308 4.83 0.00 0.00 2.57
1840 5925 2.040145 TCACATGGGAAACTGCTCATGA 59.960 45.455 10.87 0.00 39.27 3.07
1890 5975 9.764363 CCATATAGTATCAACTTCACTAGCAAA 57.236 33.333 0.00 0.00 37.15 3.68
1935 6020 3.806591 CGATGACGTACACTGGGTT 57.193 52.632 0.00 0.00 34.56 4.11
2151 6236 2.693591 TCCGGAGCTAGTGGTTTGATAG 59.306 50.000 0.00 0.00 0.00 2.08
2234 6366 0.584876 ACGACAAGGCGTGCTTTTAC 59.415 50.000 0.00 0.00 43.79 2.01
2311 6444 4.573607 TGCTTCATGTAGAGTTGATGCATC 59.426 41.667 20.14 20.14 43.72 3.91
2329 6462 5.771469 TGCATCTTTCAAACGATCAACAAT 58.229 33.333 0.00 0.00 0.00 2.71
2364 6497 2.355946 TCTGAAAGAGCTCGCTGGT 58.644 52.632 8.37 0.00 38.67 4.00
2447 6582 8.351495 CACTTTTGTGTTTAACATGCTAATGT 57.649 30.769 0.00 0.00 45.70 2.71
2522 6658 9.877178 CTACCTTTATGAACTCAGATTGTAAGT 57.123 33.333 0.00 0.00 0.00 2.24
2525 6661 7.010552 CCTTTATGAACTCAGATTGTAAGTCCG 59.989 40.741 0.00 0.00 0.00 4.79
2548 6684 6.183360 CCGTTGAGTAAGTGCCATGATTTTAT 60.183 38.462 0.00 0.00 0.00 1.40
2587 6723 9.233232 CTAAAACCACAACACTTATCTTGAAAC 57.767 33.333 0.00 0.00 0.00 2.78
2588 6724 6.767524 AACCACAACACTTATCTTGAAACA 57.232 33.333 0.00 0.00 0.00 2.83
2593 6729 5.765182 ACAACACTTATCTTGAAACAGAGGG 59.235 40.000 0.00 0.00 0.00 4.30
2648 6784 6.737720 AGTCTGATAATACTCCAGCATCAA 57.262 37.500 0.00 0.00 0.00 2.57
2650 6786 7.215789 AGTCTGATAATACTCCAGCATCAAAG 58.784 38.462 0.00 0.00 0.00 2.77
2672 6808 4.645136 AGCAGTAGAACATGGTCGATCTAA 59.355 41.667 4.80 0.00 0.00 2.10
2673 6809 5.303078 AGCAGTAGAACATGGTCGATCTAAT 59.697 40.000 4.80 0.00 0.00 1.73
2674 6810 5.986135 GCAGTAGAACATGGTCGATCTAATT 59.014 40.000 4.80 0.00 0.00 1.40
2675 6811 6.074088 GCAGTAGAACATGGTCGATCTAATTG 60.074 42.308 4.80 4.77 0.00 2.32
2676 6812 7.203218 CAGTAGAACATGGTCGATCTAATTGA 58.797 38.462 4.80 0.00 0.00 2.57
2677 6813 7.706607 CAGTAGAACATGGTCGATCTAATTGAA 59.293 37.037 4.80 0.00 0.00 2.69
2678 6814 8.258007 AGTAGAACATGGTCGATCTAATTGAAA 58.742 33.333 4.80 0.00 0.00 2.69
2679 6815 7.308782 AGAACATGGTCGATCTAATTGAAAC 57.691 36.000 4.80 0.00 0.00 2.78
2680 6816 6.316390 AGAACATGGTCGATCTAATTGAAACC 59.684 38.462 4.80 0.00 0.00 3.27
2681 6817 4.881850 ACATGGTCGATCTAATTGAAACCC 59.118 41.667 0.00 0.00 0.00 4.11
2682 6818 4.561500 TGGTCGATCTAATTGAAACCCA 57.438 40.909 0.00 0.00 0.00 4.51
2683 6819 4.912586 TGGTCGATCTAATTGAAACCCAA 58.087 39.130 0.00 0.00 39.41 4.12
2684 6820 4.698304 TGGTCGATCTAATTGAAACCCAAC 59.302 41.667 0.00 0.00 37.63 3.77
2685 6821 4.201783 GGTCGATCTAATTGAAACCCAACG 60.202 45.833 0.00 0.00 37.63 4.10
2686 6822 3.372822 TCGATCTAATTGAAACCCAACGC 59.627 43.478 0.00 0.00 37.63 4.84
2687 6823 3.374058 CGATCTAATTGAAACCCAACGCT 59.626 43.478 0.00 0.00 37.63 5.07
2688 6824 4.494199 CGATCTAATTGAAACCCAACGCTC 60.494 45.833 0.00 0.00 37.63 5.03
2689 6825 3.078837 TCTAATTGAAACCCAACGCTCC 58.921 45.455 0.00 0.00 37.63 4.70
2690 6826 1.698506 AATTGAAACCCAACGCTCCA 58.301 45.000 0.00 0.00 37.63 3.86
2691 6827 1.247567 ATTGAAACCCAACGCTCCAG 58.752 50.000 0.00 0.00 37.63 3.86
2692 6828 0.181587 TTGAAACCCAACGCTCCAGA 59.818 50.000 0.00 0.00 0.00 3.86
2693 6829 0.250295 TGAAACCCAACGCTCCAGAG 60.250 55.000 0.00 0.00 0.00 3.35
2694 6830 0.250338 GAAACCCAACGCTCCAGAGT 60.250 55.000 0.00 0.00 0.00 3.24
2695 6831 0.250338 AAACCCAACGCTCCAGAGTC 60.250 55.000 0.00 0.00 0.00 3.36
2696 6832 2.125912 CCCAACGCTCCAGAGTCG 60.126 66.667 9.06 9.06 35.30 4.18
2697 6833 2.651361 CCAACGCTCCAGAGTCGT 59.349 61.111 10.09 10.09 40.75 4.34
2698 6834 1.444553 CCAACGCTCCAGAGTCGTC 60.445 63.158 14.40 0.00 39.13 4.20
2699 6835 1.444553 CAACGCTCCAGAGTCGTCC 60.445 63.158 14.40 0.00 39.13 4.79
2700 6836 1.604023 AACGCTCCAGAGTCGTCCT 60.604 57.895 14.40 1.99 39.13 3.85
2701 6837 1.179814 AACGCTCCAGAGTCGTCCTT 61.180 55.000 14.40 1.45 39.13 3.36
2702 6838 1.137825 CGCTCCAGAGTCGTCCTTC 59.862 63.158 0.00 0.00 0.00 3.46
2703 6839 1.309499 CGCTCCAGAGTCGTCCTTCT 61.309 60.000 0.00 0.00 0.00 2.85
2704 6840 0.892063 GCTCCAGAGTCGTCCTTCTT 59.108 55.000 0.00 0.00 0.00 2.52
2705 6841 1.273886 GCTCCAGAGTCGTCCTTCTTT 59.726 52.381 0.00 0.00 0.00 2.52
2706 6842 2.289133 GCTCCAGAGTCGTCCTTCTTTT 60.289 50.000 0.00 0.00 0.00 2.27
2707 6843 3.321497 CTCCAGAGTCGTCCTTCTTTTG 58.679 50.000 0.00 0.00 0.00 2.44
2708 6844 2.037251 TCCAGAGTCGTCCTTCTTTTGG 59.963 50.000 0.00 0.00 0.00 3.28
2709 6845 2.037251 CCAGAGTCGTCCTTCTTTTGGA 59.963 50.000 0.00 0.00 0.00 3.53
2710 6846 3.494398 CCAGAGTCGTCCTTCTTTTGGAA 60.494 47.826 0.00 0.00 35.10 3.53
2711 6847 4.127171 CAGAGTCGTCCTTCTTTTGGAAA 58.873 43.478 0.00 0.00 35.10 3.13
2712 6848 4.757149 CAGAGTCGTCCTTCTTTTGGAAAT 59.243 41.667 0.00 0.00 35.10 2.17
2713 6849 5.932303 CAGAGTCGTCCTTCTTTTGGAAATA 59.068 40.000 0.00 0.00 35.10 1.40
2714 6850 6.426937 CAGAGTCGTCCTTCTTTTGGAAATAA 59.573 38.462 0.00 0.00 35.10 1.40
2715 6851 7.119846 CAGAGTCGTCCTTCTTTTGGAAATAAT 59.880 37.037 0.00 0.00 35.10 1.28
2716 6852 7.119846 AGAGTCGTCCTTCTTTTGGAAATAATG 59.880 37.037 0.00 0.00 35.10 1.90
2717 6853 6.940298 AGTCGTCCTTCTTTTGGAAATAATGA 59.060 34.615 0.00 0.00 35.10 2.57
2718 6854 7.447238 AGTCGTCCTTCTTTTGGAAATAATGAA 59.553 33.333 0.00 0.00 35.10 2.57
2719 6855 8.079809 GTCGTCCTTCTTTTGGAAATAATGAAA 58.920 33.333 0.00 0.00 35.10 2.69
2720 6856 8.802267 TCGTCCTTCTTTTGGAAATAATGAAAT 58.198 29.630 0.00 0.00 35.10 2.17
2744 6880 9.425248 AATAATAAAGAAATCAATCAGCAGGGA 57.575 29.630 0.00 0.00 0.00 4.20
2745 6881 6.956202 ATAAAGAAATCAATCAGCAGGGAG 57.044 37.500 0.00 0.00 0.00 4.30
2746 6882 2.652590 AGAAATCAATCAGCAGGGAGC 58.347 47.619 0.00 0.00 46.19 4.70
2761 6897 3.908737 GAGCTAACTCCCACAACGT 57.091 52.632 0.00 0.00 36.90 3.99
2762 6898 1.711206 GAGCTAACTCCCACAACGTC 58.289 55.000 0.00 0.00 36.90 4.34
2763 6899 0.320697 AGCTAACTCCCACAACGTCC 59.679 55.000 0.00 0.00 0.00 4.79
2764 6900 1.012486 GCTAACTCCCACAACGTCCG 61.012 60.000 0.00 0.00 0.00 4.79
2765 6901 0.316204 CTAACTCCCACAACGTCCGT 59.684 55.000 0.00 0.00 0.00 4.69
2766 6902 1.541147 CTAACTCCCACAACGTCCGTA 59.459 52.381 0.00 0.00 0.00 4.02
2767 6903 0.032540 AACTCCCACAACGTCCGTAC 59.967 55.000 0.00 0.00 0.00 3.67
2780 6916 4.047030 CGTACGTACGTGTGGAGC 57.953 61.111 33.95 11.86 44.13 4.70
2781 6917 1.499056 CGTACGTACGTGTGGAGCT 59.501 57.895 33.95 3.43 44.13 4.09
2782 6918 0.519999 CGTACGTACGTGTGGAGCTC 60.520 60.000 33.95 4.71 44.13 4.09
2783 6919 0.801251 GTACGTACGTGTGGAGCTCT 59.199 55.000 30.25 1.85 0.00 4.09
2784 6920 1.198637 GTACGTACGTGTGGAGCTCTT 59.801 52.381 30.25 1.29 0.00 2.85
2785 6921 0.240411 ACGTACGTGTGGAGCTCTTC 59.760 55.000 22.14 7.66 0.00 2.87
2786 6922 0.456312 CGTACGTGTGGAGCTCTTCC 60.456 60.000 14.64 0.00 46.98 3.46
2787 6923 0.889306 GTACGTGTGGAGCTCTTCCT 59.111 55.000 14.64 0.00 46.92 3.36
2788 6924 1.135344 GTACGTGTGGAGCTCTTCCTC 60.135 57.143 14.64 0.00 46.92 3.71
2795 6931 3.851051 GAGCTCTTCCTCCACCTTG 57.149 57.895 6.43 0.00 0.00 3.61
2796 6932 1.270907 GAGCTCTTCCTCCACCTTGA 58.729 55.000 6.43 0.00 0.00 3.02
2797 6933 1.206849 GAGCTCTTCCTCCACCTTGAG 59.793 57.143 6.43 0.00 0.00 3.02
2798 6934 0.392327 GCTCTTCCTCCACCTTGAGC 60.392 60.000 0.00 0.00 39.74 4.26
2799 6935 0.108424 CTCTTCCTCCACCTTGAGCG 60.108 60.000 0.00 0.00 0.00 5.03
2800 6936 1.743252 CTTCCTCCACCTTGAGCGC 60.743 63.158 0.00 0.00 0.00 5.92
2801 6937 2.454832 CTTCCTCCACCTTGAGCGCA 62.455 60.000 11.47 0.00 0.00 6.09
2802 6938 2.731691 TTCCTCCACCTTGAGCGCAC 62.732 60.000 11.47 3.13 0.00 5.34
2803 6939 2.743928 CTCCACCTTGAGCGCACC 60.744 66.667 11.47 0.50 0.00 5.01
2804 6940 4.329545 TCCACCTTGAGCGCACCC 62.330 66.667 11.47 0.00 0.00 4.61
2805 6941 4.641645 CCACCTTGAGCGCACCCA 62.642 66.667 11.47 0.76 0.00 4.51
2806 6942 3.052082 CACCTTGAGCGCACCCAG 61.052 66.667 11.47 1.76 0.00 4.45
2824 6960 4.441695 CTCGCTCGCCTTGCCTCA 62.442 66.667 0.00 0.00 0.00 3.86
2825 6961 3.939837 CTCGCTCGCCTTGCCTCAA 62.940 63.158 0.00 0.00 0.00 3.02
2826 6962 3.793144 CGCTCGCCTTGCCTCAAC 61.793 66.667 0.00 0.00 0.00 3.18
2827 6963 3.793144 GCTCGCCTTGCCTCAACG 61.793 66.667 0.00 0.00 0.00 4.10
2828 6964 3.121030 CTCGCCTTGCCTCAACGG 61.121 66.667 0.00 0.00 0.00 4.44
2829 6965 3.589654 CTCGCCTTGCCTCAACGGA 62.590 63.158 0.00 0.00 33.16 4.69
2830 6966 3.423154 CGCCTTGCCTCAACGGAC 61.423 66.667 0.00 0.00 33.16 4.79
2831 6967 3.056328 GCCTTGCCTCAACGGACC 61.056 66.667 0.00 0.00 33.16 4.46
2832 6968 2.359975 CCTTGCCTCAACGGACCC 60.360 66.667 0.00 0.00 33.16 4.46
2833 6969 2.750350 CTTGCCTCAACGGACCCT 59.250 61.111 0.00 0.00 33.16 4.34
2834 6970 1.376037 CTTGCCTCAACGGACCCTC 60.376 63.158 0.00 0.00 33.16 4.30
2835 6971 1.831652 CTTGCCTCAACGGACCCTCT 61.832 60.000 0.00 0.00 33.16 3.69
2836 6972 1.415672 TTGCCTCAACGGACCCTCTT 61.416 55.000 0.00 0.00 33.16 2.85
2837 6973 1.375326 GCCTCAACGGACCCTCTTT 59.625 57.895 0.00 0.00 33.16 2.52
2838 6974 0.673956 GCCTCAACGGACCCTCTTTC 60.674 60.000 0.00 0.00 33.16 2.62
2839 6975 0.036294 CCTCAACGGACCCTCTTTCC 60.036 60.000 0.00 0.00 33.16 3.13
2840 6976 0.685097 CTCAACGGACCCTCTTTCCA 59.315 55.000 0.00 0.00 31.94 3.53
2841 6977 0.395312 TCAACGGACCCTCTTTCCAC 59.605 55.000 0.00 0.00 31.94 4.02
2842 6978 0.605589 CAACGGACCCTCTTTCCACC 60.606 60.000 0.00 0.00 31.94 4.61
2843 6979 0.767060 AACGGACCCTCTTTCCACCT 60.767 55.000 0.00 0.00 31.94 4.00
2844 6980 0.767060 ACGGACCCTCTTTCCACCTT 60.767 55.000 0.00 0.00 31.94 3.50
2845 6981 0.036294 CGGACCCTCTTTCCACCTTC 60.036 60.000 0.00 0.00 31.94 3.46
2846 6982 1.363246 GGACCCTCTTTCCACCTTCT 58.637 55.000 0.00 0.00 32.82 2.85
2847 6983 1.279558 GGACCCTCTTTCCACCTTCTC 59.720 57.143 0.00 0.00 32.82 2.87
2848 6984 1.279558 GACCCTCTTTCCACCTTCTCC 59.720 57.143 0.00 0.00 0.00 3.71
2849 6985 1.132365 ACCCTCTTTCCACCTTCTCCT 60.132 52.381 0.00 0.00 0.00 3.69
2850 6986 1.988846 CCCTCTTTCCACCTTCTCCTT 59.011 52.381 0.00 0.00 0.00 3.36
2851 6987 2.026729 CCCTCTTTCCACCTTCTCCTTC 60.027 54.545 0.00 0.00 0.00 3.46
2852 6988 2.909662 CCTCTTTCCACCTTCTCCTTCT 59.090 50.000 0.00 0.00 0.00 2.85
2853 6989 3.055458 CCTCTTTCCACCTTCTCCTTCTC 60.055 52.174 0.00 0.00 0.00 2.87
2854 6990 3.837731 CTCTTTCCACCTTCTCCTTCTCT 59.162 47.826 0.00 0.00 0.00 3.10
2855 6991 3.835395 TCTTTCCACCTTCTCCTTCTCTC 59.165 47.826 0.00 0.00 0.00 3.20
2856 6992 2.239681 TCCACCTTCTCCTTCTCTCC 57.760 55.000 0.00 0.00 0.00 3.71
2857 6993 1.719378 TCCACCTTCTCCTTCTCTCCT 59.281 52.381 0.00 0.00 0.00 3.69
2858 6994 2.107366 CCACCTTCTCCTTCTCTCCTC 58.893 57.143 0.00 0.00 0.00 3.71
2859 6995 2.292192 CCACCTTCTCCTTCTCTCCTCT 60.292 54.545 0.00 0.00 0.00 3.69
2860 6996 3.023832 CACCTTCTCCTTCTCTCCTCTC 58.976 54.545 0.00 0.00 0.00 3.20
2861 6997 2.926329 ACCTTCTCCTTCTCTCCTCTCT 59.074 50.000 0.00 0.00 0.00 3.10
2862 6998 3.336694 ACCTTCTCCTTCTCTCCTCTCTT 59.663 47.826 0.00 0.00 0.00 2.85
2863 6999 3.954258 CCTTCTCCTTCTCTCCTCTCTTC 59.046 52.174 0.00 0.00 0.00 2.87
2864 7000 3.275617 TCTCCTTCTCTCCTCTCTTCG 57.724 52.381 0.00 0.00 0.00 3.79
2865 7001 2.574369 TCTCCTTCTCTCCTCTCTTCGT 59.426 50.000 0.00 0.00 0.00 3.85
2866 7002 2.943033 CTCCTTCTCTCCTCTCTTCGTC 59.057 54.545 0.00 0.00 0.00 4.20
2867 7003 2.021457 CCTTCTCTCCTCTCTTCGTCC 58.979 57.143 0.00 0.00 0.00 4.79
2868 7004 2.619332 CCTTCTCTCCTCTCTTCGTCCA 60.619 54.545 0.00 0.00 0.00 4.02
2869 7005 2.411628 TCTCTCCTCTCTTCGTCCAG 57.588 55.000 0.00 0.00 0.00 3.86
2870 7006 0.738389 CTCTCCTCTCTTCGTCCAGC 59.262 60.000 0.00 0.00 0.00 4.85
2871 7007 0.038310 TCTCCTCTCTTCGTCCAGCA 59.962 55.000 0.00 0.00 0.00 4.41
2872 7008 0.455410 CTCCTCTCTTCGTCCAGCAG 59.545 60.000 0.00 0.00 0.00 4.24
2873 7009 1.153667 CCTCTCTTCGTCCAGCAGC 60.154 63.158 0.00 0.00 0.00 5.25
2874 7010 1.588597 CTCTCTTCGTCCAGCAGCA 59.411 57.895 0.00 0.00 0.00 4.41
2875 7011 0.735632 CTCTCTTCGTCCAGCAGCAC 60.736 60.000 0.00 0.00 0.00 4.40
2876 7012 1.005748 CTCTTCGTCCAGCAGCACA 60.006 57.895 0.00 0.00 0.00 4.57
2877 7013 1.005748 TCTTCGTCCAGCAGCACAG 60.006 57.895 0.00 0.00 0.00 3.66
2878 7014 2.666190 TTCGTCCAGCAGCACAGC 60.666 61.111 0.00 0.00 0.00 4.40
2879 7015 4.687215 TCGTCCAGCAGCACAGCC 62.687 66.667 0.00 0.00 34.23 4.85
2880 7016 4.994471 CGTCCAGCAGCACAGCCA 62.994 66.667 0.00 0.00 34.23 4.75
2881 7017 3.054503 GTCCAGCAGCACAGCCAG 61.055 66.667 0.00 0.00 34.23 4.85
2884 7020 3.432588 CAGCAGCACAGCCAGCTC 61.433 66.667 0.00 0.00 41.14 4.09
2885 7021 3.949980 AGCAGCACAGCCAGCTCA 61.950 61.111 0.00 0.00 41.14 4.26
2886 7022 3.735029 GCAGCACAGCCAGCTCAC 61.735 66.667 0.00 0.00 41.14 3.51
2887 7023 3.054503 CAGCACAGCCAGCTCACC 61.055 66.667 0.00 0.00 41.14 4.02
2888 7024 4.694233 AGCACAGCCAGCTCACCG 62.694 66.667 0.00 0.00 38.01 4.94
2922 7058 4.880537 CGCGCGCTCCTCCTTCAT 62.881 66.667 30.48 0.00 0.00 2.57
2923 7059 2.964389 GCGCGCTCCTCCTTCATC 60.964 66.667 26.67 0.00 0.00 2.92
2924 7060 2.496341 CGCGCTCCTCCTTCATCA 59.504 61.111 5.56 0.00 0.00 3.07
2925 7061 1.153568 CGCGCTCCTCCTTCATCAA 60.154 57.895 5.56 0.00 0.00 2.57
2926 7062 1.150567 CGCGCTCCTCCTTCATCAAG 61.151 60.000 5.56 0.00 0.00 3.02
2927 7063 1.435408 GCGCTCCTCCTTCATCAAGC 61.435 60.000 0.00 0.00 0.00 4.01
2928 7064 0.107993 CGCTCCTCCTTCATCAAGCA 60.108 55.000 0.00 0.00 0.00 3.91
2929 7065 1.474677 CGCTCCTCCTTCATCAAGCAT 60.475 52.381 0.00 0.00 0.00 3.79
2930 7066 2.220313 GCTCCTCCTTCATCAAGCATC 58.780 52.381 0.00 0.00 0.00 3.91
2931 7067 2.848691 CTCCTCCTTCATCAAGCATCC 58.151 52.381 0.00 0.00 0.00 3.51
2932 7068 1.492176 TCCTCCTTCATCAAGCATCCC 59.508 52.381 0.00 0.00 0.00 3.85
2933 7069 1.590932 CTCCTTCATCAAGCATCCCG 58.409 55.000 0.00 0.00 0.00 5.14
2934 7070 0.181114 TCCTTCATCAAGCATCCCGG 59.819 55.000 0.00 0.00 0.00 5.73
2935 7071 0.820891 CCTTCATCAAGCATCCCGGG 60.821 60.000 16.85 16.85 0.00 5.73
2936 7072 1.450531 CTTCATCAAGCATCCCGGGC 61.451 60.000 18.49 3.80 0.00 6.13
2937 7073 2.124193 CATCAAGCATCCCGGGCA 60.124 61.111 18.49 5.14 0.00 5.36
2938 7074 2.124151 ATCAAGCATCCCGGGCAC 60.124 61.111 18.49 7.46 0.00 5.01
2951 7087 2.692368 GGCACCCCATCCTCCAGA 60.692 66.667 0.00 0.00 0.00 3.86
2952 7088 2.081161 GGCACCCCATCCTCCAGAT 61.081 63.158 0.00 0.00 34.66 2.90
2953 7089 1.649271 GGCACCCCATCCTCCAGATT 61.649 60.000 0.00 0.00 30.59 2.40
2954 7090 1.140312 GCACCCCATCCTCCAGATTA 58.860 55.000 0.00 0.00 30.59 1.75
2955 7091 1.072965 GCACCCCATCCTCCAGATTAG 59.927 57.143 0.00 0.00 30.59 1.73
2956 7092 2.694397 CACCCCATCCTCCAGATTAGA 58.306 52.381 0.00 0.00 30.59 2.10
2957 7093 2.370189 CACCCCATCCTCCAGATTAGAC 59.630 54.545 0.00 0.00 30.59 2.59
2958 7094 1.981495 CCCCATCCTCCAGATTAGACC 59.019 57.143 0.00 0.00 30.59 3.85
2959 7095 2.694397 CCCATCCTCCAGATTAGACCA 58.306 52.381 0.00 0.00 30.59 4.02
2960 7096 3.048600 CCCATCCTCCAGATTAGACCAA 58.951 50.000 0.00 0.00 30.59 3.67
2961 7097 3.181450 CCCATCCTCCAGATTAGACCAAC 60.181 52.174 0.00 0.00 30.59 3.77
2962 7098 3.493350 CCATCCTCCAGATTAGACCAACG 60.493 52.174 0.00 0.00 30.59 4.10
2963 7099 2.108168 TCCTCCAGATTAGACCAACGG 58.892 52.381 0.00 0.00 0.00 4.44
2964 7100 1.831736 CCTCCAGATTAGACCAACGGT 59.168 52.381 0.00 0.00 39.44 4.83
2965 7101 2.418746 CCTCCAGATTAGACCAACGGTG 60.419 54.545 0.00 0.00 35.25 4.94
2975 7111 2.033602 CAACGGTGGAGGAACCCC 59.966 66.667 0.00 0.00 36.84 4.95
2976 7112 2.448931 AACGGTGGAGGAACCCCA 60.449 61.111 0.00 0.00 36.84 4.96
2977 7113 1.850755 AACGGTGGAGGAACCCCAT 60.851 57.895 4.82 0.00 39.51 4.00
2978 7114 2.137177 AACGGTGGAGGAACCCCATG 62.137 60.000 4.82 0.00 39.51 3.66
2979 7115 2.683475 GGTGGAGGAACCCCATGG 59.317 66.667 4.14 4.14 39.51 3.66
2980 7116 2.043953 GTGGAGGAACCCCATGGC 60.044 66.667 6.09 0.00 39.51 4.40
2981 7117 2.534011 TGGAGGAACCCCATGGCA 60.534 61.111 6.09 0.00 23.65 4.92
2982 7118 1.935400 TGGAGGAACCCCATGGCAT 60.935 57.895 6.09 0.00 23.65 4.40
2983 7119 1.311059 GGAGGAACCCCATGGCATT 59.689 57.895 6.09 1.74 33.59 3.56
2984 7120 0.555769 GGAGGAACCCCATGGCATTA 59.444 55.000 6.09 0.00 33.59 1.90
2985 7121 1.147817 GGAGGAACCCCATGGCATTAT 59.852 52.381 6.09 0.00 33.59 1.28
2986 7122 2.426268 GGAGGAACCCCATGGCATTATT 60.426 50.000 6.09 0.00 33.59 1.40
2987 7123 3.308401 GAGGAACCCCATGGCATTATTT 58.692 45.455 6.09 0.00 33.59 1.40
2988 7124 4.479158 GAGGAACCCCATGGCATTATTTA 58.521 43.478 6.09 0.00 33.59 1.40
2989 7125 4.889780 AGGAACCCCATGGCATTATTTAA 58.110 39.130 6.09 0.00 33.59 1.52
2990 7126 5.284582 AGGAACCCCATGGCATTATTTAAA 58.715 37.500 6.09 0.00 33.59 1.52
2991 7127 5.366477 AGGAACCCCATGGCATTATTTAAAG 59.634 40.000 6.09 0.00 33.59 1.85
2992 7128 5.365314 GGAACCCCATGGCATTATTTAAAGA 59.635 40.000 6.09 0.00 33.59 2.52
2993 7129 6.462909 GGAACCCCATGGCATTATTTAAAGAG 60.463 42.308 6.09 0.00 33.59 2.85
2994 7130 5.776358 ACCCCATGGCATTATTTAAAGAGA 58.224 37.500 6.09 0.00 33.59 3.10
2995 7131 5.835280 ACCCCATGGCATTATTTAAAGAGAG 59.165 40.000 6.09 0.00 33.59 3.20
2996 7132 6.070656 CCCCATGGCATTATTTAAAGAGAGA 58.929 40.000 6.09 0.00 0.00 3.10
2997 7133 6.550854 CCCCATGGCATTATTTAAAGAGAGAA 59.449 38.462 6.09 0.00 0.00 2.87
2998 7134 7.234166 CCCCATGGCATTATTTAAAGAGAGAAT 59.766 37.037 6.09 0.00 0.00 2.40
2999 7135 8.086522 CCCATGGCATTATTTAAAGAGAGAATG 58.913 37.037 6.09 0.71 0.00 2.67
3000 7136 8.636213 CCATGGCATTATTTAAAGAGAGAATGT 58.364 33.333 0.00 0.00 0.00 2.71
3001 7137 9.459640 CATGGCATTATTTAAAGAGAGAATGTG 57.540 33.333 0.00 0.00 0.00 3.21
3002 7138 8.806429 TGGCATTATTTAAAGAGAGAATGTGA 57.194 30.769 0.00 0.00 0.00 3.58
3003 7139 8.896744 TGGCATTATTTAAAGAGAGAATGTGAG 58.103 33.333 0.00 0.00 0.00 3.51
3004 7140 9.113838 GGCATTATTTAAAGAGAGAATGTGAGA 57.886 33.333 0.00 0.00 0.00 3.27
3005 7141 9.928236 GCATTATTTAAAGAGAGAATGTGAGAC 57.072 33.333 0.00 0.00 0.00 3.36
3019 7155 4.908601 TGTGAGACACATAATTGGACCT 57.091 40.909 0.25 0.00 39.62 3.85
3021 7157 6.367374 TGTGAGACACATAATTGGACCTAA 57.633 37.500 0.25 0.00 39.62 2.69
3022 7158 6.406370 TGTGAGACACATAATTGGACCTAAG 58.594 40.000 0.25 0.00 39.62 2.18
3023 7159 6.212589 TGTGAGACACATAATTGGACCTAAGA 59.787 38.462 0.25 0.00 39.62 2.10
3024 7160 6.758886 GTGAGACACATAATTGGACCTAAGAG 59.241 42.308 0.00 0.00 34.08 2.85
3025 7161 6.127054 TGAGACACATAATTGGACCTAAGAGG 60.127 42.308 0.00 0.00 42.49 3.69
3026 7162 5.131142 AGACACATAATTGGACCTAAGAGGG 59.869 44.000 0.00 0.00 40.58 4.30
3027 7163 4.166144 ACACATAATTGGACCTAAGAGGGG 59.834 45.833 0.00 0.00 40.58 4.79
3028 7164 4.166144 CACATAATTGGACCTAAGAGGGGT 59.834 45.833 0.00 0.00 40.58 4.95
3029 7165 4.794067 ACATAATTGGACCTAAGAGGGGTT 59.206 41.667 0.00 0.00 40.58 4.11
3030 7166 3.739401 AATTGGACCTAAGAGGGGTTG 57.261 47.619 0.00 0.00 40.58 3.77
3031 7167 2.426431 TTGGACCTAAGAGGGGTTGA 57.574 50.000 0.00 0.00 40.58 3.18
3032 7168 2.426431 TGGACCTAAGAGGGGTTGAA 57.574 50.000 0.00 0.00 40.58 2.69
3033 7169 2.708759 TGGACCTAAGAGGGGTTGAAA 58.291 47.619 0.00 0.00 40.58 2.69
3034 7170 2.374170 TGGACCTAAGAGGGGTTGAAAC 59.626 50.000 0.00 0.00 40.58 2.78
3035 7171 2.643304 GGACCTAAGAGGGGTTGAAACT 59.357 50.000 0.00 0.00 40.58 2.66
3036 7172 3.307550 GGACCTAAGAGGGGTTGAAACTC 60.308 52.174 0.00 0.00 40.58 3.01
3037 7173 3.323775 ACCTAAGAGGGGTTGAAACTCA 58.676 45.455 0.00 0.00 40.58 3.41
3038 7174 3.328050 ACCTAAGAGGGGTTGAAACTCAG 59.672 47.826 0.00 0.00 40.58 3.35
3039 7175 2.959465 AAGAGGGGTTGAAACTCAGG 57.041 50.000 0.00 0.00 33.76 3.86
3040 7176 1.821088 AGAGGGGTTGAAACTCAGGT 58.179 50.000 0.00 0.00 33.76 4.00
3041 7177 1.700186 AGAGGGGTTGAAACTCAGGTC 59.300 52.381 0.00 0.00 33.76 3.85
3042 7178 1.420138 GAGGGGTTGAAACTCAGGTCA 59.580 52.381 0.00 0.00 0.00 4.02
3043 7179 1.421646 AGGGGTTGAAACTCAGGTCAG 59.578 52.381 0.00 0.00 0.00 3.51
3044 7180 1.239347 GGGTTGAAACTCAGGTCAGC 58.761 55.000 0.00 0.00 0.00 4.26
3045 7181 1.202818 GGGTTGAAACTCAGGTCAGCT 60.203 52.381 0.00 0.00 0.00 4.24
3046 7182 2.038557 GGGTTGAAACTCAGGTCAGCTA 59.961 50.000 0.00 0.00 0.00 3.32
3047 7183 3.330267 GGTTGAAACTCAGGTCAGCTAG 58.670 50.000 0.00 0.00 0.00 3.42
3048 7184 3.330267 GTTGAAACTCAGGTCAGCTAGG 58.670 50.000 0.00 0.00 0.00 3.02
3049 7185 1.276421 TGAAACTCAGGTCAGCTAGGC 59.724 52.381 0.00 0.00 0.00 3.93
3050 7186 0.247736 AAACTCAGGTCAGCTAGGCG 59.752 55.000 0.00 0.00 0.00 5.52
3051 7187 0.612174 AACTCAGGTCAGCTAGGCGA 60.612 55.000 0.00 0.00 0.00 5.54
3052 7188 0.612174 ACTCAGGTCAGCTAGGCGAA 60.612 55.000 0.00 0.00 0.00 4.70
3053 7189 0.532573 CTCAGGTCAGCTAGGCGAAA 59.467 55.000 0.00 0.00 0.00 3.46
3054 7190 0.532573 TCAGGTCAGCTAGGCGAAAG 59.467 55.000 0.00 0.00 0.00 2.62
3068 7204 2.133249 GAAAGCAAAACGCCTTCGC 58.867 52.632 0.00 0.00 44.04 4.70
3069 7205 1.275471 GAAAGCAAAACGCCTTCGCC 61.275 55.000 0.00 0.00 44.04 5.54
3070 7206 2.010582 AAAGCAAAACGCCTTCGCCA 62.011 50.000 0.00 0.00 44.04 5.69
3071 7207 2.677573 AAGCAAAACGCCTTCGCCAC 62.678 55.000 0.00 0.00 44.04 5.01
3072 7208 3.030652 CAAAACGCCTTCGCCACT 58.969 55.556 0.00 0.00 39.84 4.00
3073 7209 1.370414 CAAAACGCCTTCGCCACTG 60.370 57.895 0.00 0.00 39.84 3.66
3074 7210 3.194272 AAAACGCCTTCGCCACTGC 62.194 57.895 0.00 0.00 39.84 4.40
3086 7222 4.435436 CACTGCGCTACGAGCCCA 62.435 66.667 9.73 0.00 38.18 5.36
3087 7223 3.461773 ACTGCGCTACGAGCCCAT 61.462 61.111 9.73 0.00 38.18 4.00
3088 7224 2.202932 CTGCGCTACGAGCCCATT 60.203 61.111 9.73 0.00 38.18 3.16
3089 7225 1.067416 CTGCGCTACGAGCCCATTA 59.933 57.895 9.73 0.00 38.18 1.90
3090 7226 0.319900 CTGCGCTACGAGCCCATTAT 60.320 55.000 9.73 0.00 38.18 1.28
3091 7227 0.105964 TGCGCTACGAGCCCATTATT 59.894 50.000 9.73 0.00 38.18 1.40
3092 7228 1.226746 GCGCTACGAGCCCATTATTT 58.773 50.000 0.00 0.00 38.18 1.40
3093 7229 1.602377 GCGCTACGAGCCCATTATTTT 59.398 47.619 0.00 0.00 38.18 1.82
3094 7230 2.032924 GCGCTACGAGCCCATTATTTTT 59.967 45.455 0.00 0.00 38.18 1.94
3095 7231 3.617669 CGCTACGAGCCCATTATTTTTG 58.382 45.455 0.00 0.00 38.18 2.44
3096 7232 3.372060 GCTACGAGCCCATTATTTTTGC 58.628 45.455 0.00 0.00 34.48 3.68
3097 7233 3.181491 GCTACGAGCCCATTATTTTTGCA 60.181 43.478 0.00 0.00 34.48 4.08
3098 7234 3.951775 ACGAGCCCATTATTTTTGCAA 57.048 38.095 0.00 0.00 0.00 4.08
3099 7235 3.584834 ACGAGCCCATTATTTTTGCAAC 58.415 40.909 0.00 0.00 0.00 4.17
3100 7236 2.598192 CGAGCCCATTATTTTTGCAACG 59.402 45.455 0.00 0.00 0.00 4.10
3101 7237 2.345876 AGCCCATTATTTTTGCAACGC 58.654 42.857 0.00 0.00 0.00 4.84
3102 7238 2.072298 GCCCATTATTTTTGCAACGCA 58.928 42.857 0.00 0.00 36.47 5.24
3117 7253 7.881643 TTGCAACGCAATATTGTTTCTAATT 57.118 28.000 16.61 0.00 43.99 1.40
3118 7254 7.504922 TGCAACGCAATATTGTTTCTAATTC 57.495 32.000 16.61 0.00 34.76 2.17
3119 7255 7.087007 TGCAACGCAATATTGTTTCTAATTCA 58.913 30.769 16.61 2.12 34.76 2.57
3120 7256 7.758980 TGCAACGCAATATTGTTTCTAATTCAT 59.241 29.630 16.61 0.00 34.76 2.57
3121 7257 8.261908 GCAACGCAATATTGTTTCTAATTCATC 58.738 33.333 16.61 0.00 0.00 2.92
3122 7258 8.745837 CAACGCAATATTGTTTCTAATTCATCC 58.254 33.333 16.61 0.00 0.00 3.51
3123 7259 7.995289 ACGCAATATTGTTTCTAATTCATCCA 58.005 30.769 16.61 0.00 0.00 3.41
3124 7260 8.131100 ACGCAATATTGTTTCTAATTCATCCAG 58.869 33.333 16.61 0.00 0.00 3.86
3125 7261 7.113965 CGCAATATTGTTTCTAATTCATCCAGC 59.886 37.037 16.61 0.00 0.00 4.85
3126 7262 7.922278 GCAATATTGTTTCTAATTCATCCAGCA 59.078 33.333 16.61 0.00 0.00 4.41
3127 7263 9.806203 CAATATTGTTTCTAATTCATCCAGCAA 57.194 29.630 7.32 0.00 0.00 3.91
3128 7264 9.807649 AATATTGTTTCTAATTCATCCAGCAAC 57.192 29.630 0.00 0.00 0.00 4.17
3129 7265 6.899393 TTGTTTCTAATTCATCCAGCAACT 57.101 33.333 0.00 0.00 0.00 3.16
3130 7266 6.899393 TGTTTCTAATTCATCCAGCAACTT 57.101 33.333 0.00 0.00 0.00 2.66
3131 7267 7.994425 TGTTTCTAATTCATCCAGCAACTTA 57.006 32.000 0.00 0.00 0.00 2.24
3132 7268 8.579850 TGTTTCTAATTCATCCAGCAACTTAT 57.420 30.769 0.00 0.00 0.00 1.73
3133 7269 9.023962 TGTTTCTAATTCATCCAGCAACTTATT 57.976 29.630 0.00 0.00 0.00 1.40
3134 7270 9.294030 GTTTCTAATTCATCCAGCAACTTATTG 57.706 33.333 0.00 0.00 38.99 1.90
3135 7271 8.806429 TTCTAATTCATCCAGCAACTTATTGA 57.194 30.769 0.00 0.00 38.15 2.57
3136 7272 8.985315 TCTAATTCATCCAGCAACTTATTGAT 57.015 30.769 0.00 0.00 38.15 2.57
3137 7273 9.412460 TCTAATTCATCCAGCAACTTATTGATT 57.588 29.630 0.00 0.00 38.15 2.57
3138 7274 9.459640 CTAATTCATCCAGCAACTTATTGATTG 57.540 33.333 0.00 0.00 38.15 2.67
3139 7275 6.839124 TTCATCCAGCAACTTATTGATTGT 57.161 33.333 0.00 0.00 38.15 2.71
3140 7276 7.936496 TTCATCCAGCAACTTATTGATTGTA 57.064 32.000 0.00 0.00 38.15 2.41
3141 7277 7.558161 TCATCCAGCAACTTATTGATTGTAG 57.442 36.000 0.00 0.00 38.15 2.74
3142 7278 7.112122 TCATCCAGCAACTTATTGATTGTAGT 58.888 34.615 0.00 0.00 38.15 2.73
3143 7279 7.611467 TCATCCAGCAACTTATTGATTGTAGTT 59.389 33.333 0.00 0.00 38.15 2.24
3144 7280 7.759489 TCCAGCAACTTATTGATTGTAGTTT 57.241 32.000 0.00 0.00 38.15 2.66
3145 7281 8.177119 TCCAGCAACTTATTGATTGTAGTTTT 57.823 30.769 0.00 0.00 38.15 2.43
3146 7282 9.290988 TCCAGCAACTTATTGATTGTAGTTTTA 57.709 29.630 0.00 0.00 38.15 1.52
3147 7283 9.341899 CCAGCAACTTATTGATTGTAGTTTTAC 57.658 33.333 0.00 0.00 38.15 2.01
3148 7284 9.051027 CAGCAACTTATTGATTGTAGTTTTACG 57.949 33.333 0.00 0.00 38.15 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 2.107953 GAGGGCATCTCTGTCGCC 59.892 66.667 0.00 0.00 45.47 5.54
13 14 1.227205 CTGAGGGCATCTCTGTCGC 60.227 63.158 0.00 0.00 42.86 5.19
75 76 1.561542 CCAAGGGAGTATGGCAACTCT 59.438 52.381 21.03 8.79 44.42 3.24
84 85 2.762459 TCGCGCCCAAGGGAGTAT 60.762 61.111 9.92 0.00 37.40 2.12
223 229 1.690633 GCTCATGGACTCCAGGGGA 60.691 63.158 14.05 5.40 38.14 4.81
264 270 2.747022 TGGACATCACCACCACCG 59.253 61.111 0.00 0.00 34.77 4.94
300 322 3.716195 CCATCCGCCCTGTCCACA 61.716 66.667 0.00 0.00 0.00 4.17
394 417 3.386237 GTGCTCGACCTCTGGGCT 61.386 66.667 0.00 0.00 35.63 5.19
521 544 3.279116 TCGTCGTCGTTGACCCGT 61.279 61.111 1.33 0.00 35.40 5.28
522 545 2.798262 GTCGTCGTCGTTGACCCG 60.798 66.667 1.33 0.00 35.40 5.28
523 546 2.798262 CGTCGTCGTCGTTGACCC 60.798 66.667 3.67 0.00 35.40 4.46
525 548 0.179230 ATCTCGTCGTCGTCGTTGAC 60.179 55.000 11.41 8.81 38.33 3.18
527 550 0.179233 TCATCTCGTCGTCGTCGTTG 60.179 55.000 11.41 8.33 38.33 4.10
530 553 1.648756 GCTCATCTCGTCGTCGTCG 60.649 63.158 5.50 5.50 38.33 5.12
531 554 1.648756 CGCTCATCTCGTCGTCGTC 60.649 63.158 1.33 0.00 38.33 4.20
532 555 1.429927 ATCGCTCATCTCGTCGTCGT 61.430 55.000 1.33 0.00 38.33 4.34
533 556 0.719846 GATCGCTCATCTCGTCGTCG 60.720 60.000 0.00 0.00 38.55 5.12
534 557 0.719846 CGATCGCTCATCTCGTCGTC 60.720 60.000 0.26 0.00 0.00 4.20
535 558 1.277142 CGATCGCTCATCTCGTCGT 59.723 57.895 0.26 0.00 0.00 4.34
536 559 0.989315 CACGATCGCTCATCTCGTCG 60.989 60.000 16.60 0.00 43.21 5.12
537 560 0.028242 ACACGATCGCTCATCTCGTC 59.972 55.000 16.60 0.00 43.21 4.20
539 562 1.253800 CAAACACGATCGCTCATCTCG 59.746 52.381 16.60 0.00 38.34 4.04
540 563 2.530177 TCAAACACGATCGCTCATCTC 58.470 47.619 16.60 0.00 0.00 2.75
542 565 3.544834 CCAATCAAACACGATCGCTCATC 60.545 47.826 16.60 0.00 0.00 2.92
543 566 2.352651 CCAATCAAACACGATCGCTCAT 59.647 45.455 16.60 0.00 0.00 2.90
544 567 1.731709 CCAATCAAACACGATCGCTCA 59.268 47.619 16.60 0.00 0.00 4.26
547 570 0.523335 GCCCAATCAAACACGATCGC 60.523 55.000 16.60 0.00 0.00 4.58
549 572 1.062587 CGAGCCCAATCAAACACGATC 59.937 52.381 0.00 0.00 0.00 3.69
550 573 1.086696 CGAGCCCAATCAAACACGAT 58.913 50.000 0.00 0.00 0.00 3.73
551 574 1.573829 GCGAGCCCAATCAAACACGA 61.574 55.000 0.00 0.00 0.00 4.35
553 576 1.154225 CGCGAGCCCAATCAAACAC 60.154 57.895 0.00 0.00 0.00 3.32
570 593 2.731721 TACTGTTGCACCGACGCG 60.732 61.111 3.53 3.53 33.35 6.01
571 594 1.952133 TGTACTGTTGCACCGACGC 60.952 57.895 0.00 0.00 0.00 5.19
572 595 1.850640 GTGTACTGTTGCACCGACG 59.149 57.895 0.00 0.00 32.46 5.12
573 596 1.554042 CCGTGTACTGTTGCACCGAC 61.554 60.000 8.78 0.00 35.02 4.79
574 597 1.300311 CCGTGTACTGTTGCACCGA 60.300 57.895 8.78 0.00 35.02 4.69
575 598 1.155424 AACCGTGTACTGTTGCACCG 61.155 55.000 8.78 6.04 35.02 4.94
576 599 0.584876 GAACCGTGTACTGTTGCACC 59.415 55.000 8.78 0.00 35.02 5.01
577 600 0.584876 GGAACCGTGTACTGTTGCAC 59.415 55.000 6.08 5.48 33.14 4.57
578 601 0.876777 CGGAACCGTGTACTGTTGCA 60.877 55.000 4.99 0.00 32.63 4.08
579 602 1.562575 CCGGAACCGTGTACTGTTGC 61.563 60.000 12.23 0.00 37.81 4.17
580 603 1.562575 GCCGGAACCGTGTACTGTTG 61.563 60.000 5.05 0.00 37.81 3.33
581 604 1.301165 GCCGGAACCGTGTACTGTT 60.301 57.895 5.05 0.00 37.81 3.16
582 605 2.341176 GCCGGAACCGTGTACTGT 59.659 61.111 5.05 0.00 37.81 3.55
583 606 2.025418 GTGCCGGAACCGTGTACTG 61.025 63.158 5.05 0.00 37.81 2.74
584 607 2.341176 GTGCCGGAACCGTGTACT 59.659 61.111 5.05 0.00 37.81 2.73
585 608 3.107661 CGTGCCGGAACCGTGTAC 61.108 66.667 7.10 11.32 37.81 2.90
590 613 2.104253 AATTAGCGTGCCGGAACCG 61.104 57.895 7.10 5.15 39.44 4.44
591 614 1.427819 CAATTAGCGTGCCGGAACC 59.572 57.895 7.10 0.00 0.00 3.62
592 615 1.022451 TCCAATTAGCGTGCCGGAAC 61.022 55.000 5.05 2.82 0.00 3.62
593 616 0.742990 CTCCAATTAGCGTGCCGGAA 60.743 55.000 5.05 0.00 0.00 4.30
594 617 1.153449 CTCCAATTAGCGTGCCGGA 60.153 57.895 5.05 0.00 0.00 5.14
614 4227 1.615107 CGTTCCCGAGTTTGAGTCGC 61.615 60.000 0.00 0.00 39.58 5.19
632 4245 2.128274 CGCCAACACGAACGAACG 60.128 61.111 0.14 0.00 39.31 3.95
710 4705 4.763793 TGTCAACTGTGTAGTACTACCCTC 59.236 45.833 26.41 17.76 35.69 4.30
786 4844 2.571216 CGGGAGTTCTGACCACGGT 61.571 63.158 0.00 0.00 0.00 4.83
825 4883 2.420568 GGACACCAGGCGGTCGATA 61.421 63.158 5.91 0.00 44.71 2.92
837 4895 2.378634 CCATGGAGGGGAGGACACC 61.379 68.421 5.56 0.00 40.50 4.16
875 4933 4.357947 GCCTGACTCGCGACCACA 62.358 66.667 3.71 4.77 0.00 4.17
889 4947 0.112025 AAGAAGCCAAGAAGCTGCCT 59.888 50.000 0.00 0.00 44.11 4.75
891 4949 0.167689 CGAAGAAGCCAAGAAGCTGC 59.832 55.000 0.00 0.00 44.11 5.25
897 4955 1.672356 GCCAGCGAAGAAGCCAAGA 60.672 57.895 0.00 0.00 38.01 3.02
903 4961 2.507110 TTCCGAGGCCAGCGAAGAAG 62.507 60.000 18.21 2.79 0.00 2.85
908 4966 4.082523 CCTTTCCGAGGCCAGCGA 62.083 66.667 18.21 0.50 39.09 4.93
920 4987 3.723348 GGTCACGGCGCACCTTTC 61.723 66.667 18.71 0.00 0.00 2.62
939 5006 2.362503 TCGATCGAGGCCCAGTGT 60.363 61.111 15.15 0.00 0.00 3.55
942 5009 3.147595 TGGTCGATCGAGGCCCAG 61.148 66.667 20.09 0.00 0.00 4.45
947 5017 2.024871 GAGCGTGGTCGATCGAGG 59.975 66.667 20.09 9.41 42.30 4.63
951 5021 1.805945 AAAGCGAGCGTGGTCGATC 60.806 57.895 23.80 8.13 46.94 3.69
952 5025 2.094659 CAAAGCGAGCGTGGTCGAT 61.095 57.895 23.80 15.85 42.85 3.59
953 5026 2.733218 CAAAGCGAGCGTGGTCGA 60.733 61.111 23.80 0.00 42.85 4.20
957 5030 4.389576 GCACCAAAGCGAGCGTGG 62.390 66.667 15.94 15.94 38.46 4.94
969 5042 2.586635 GAACGACACACCGCACCA 60.587 61.111 0.00 0.00 0.00 4.17
970 5043 1.959226 ATGAACGACACACCGCACC 60.959 57.895 0.00 0.00 0.00 5.01
981 5054 1.385528 TAGCTAGACGCCATGAACGA 58.614 50.000 13.95 0.00 40.39 3.85
1012 5085 4.156008 AGGTATCTGCCGTGAAATCAAAAC 59.844 41.667 0.00 0.00 0.00 2.43
1016 5089 3.270027 CAAGGTATCTGCCGTGAAATCA 58.730 45.455 0.00 0.00 39.80 2.57
1018 5091 2.238646 TCCAAGGTATCTGCCGTGAAAT 59.761 45.455 2.07 0.00 39.80 2.17
1019 5092 1.626321 TCCAAGGTATCTGCCGTGAAA 59.374 47.619 2.07 0.00 39.80 2.69
1030 5103 3.454447 TCCGACATGACAATCCAAGGTAT 59.546 43.478 0.00 0.00 0.00 2.73
1050 5123 1.079503 GTGTGAAGAACGAGCCATCC 58.920 55.000 0.00 0.00 0.00 3.51
1053 5126 0.468226 AAGGTGTGAAGAACGAGCCA 59.532 50.000 0.00 0.00 0.00 4.75
1064 5137 2.734606 CAAATAGCGTTCGAAGGTGTGA 59.265 45.455 18.23 3.24 0.00 3.58
1095 5168 1.609501 CAAGGTGAGGAGACGGGGA 60.610 63.158 0.00 0.00 0.00 4.81
1101 5174 1.059584 TGTTGGGCAAGGTGAGGAGA 61.060 55.000 0.00 0.00 0.00 3.71
1106 5179 0.323816 TGTGTTGTTGGGCAAGGTGA 60.324 50.000 0.00 0.00 37.83 4.02
1118 5191 1.413445 AGGCAATGCATGTTGTGTTGT 59.587 42.857 7.79 0.00 0.00 3.32
1136 5209 2.511600 GCCAATCGTCCGTGGAGG 60.512 66.667 2.18 2.18 37.03 4.30
1197 5270 1.334960 CCAGTGAACGGATTGTGCAAC 60.335 52.381 0.00 0.00 38.07 4.17
1231 5304 4.371624 TGACAACATCCAACTCAGGAAT 57.628 40.909 0.00 0.00 41.92 3.01
1247 5320 2.093921 TCGGAAACATCGCCTATGACAA 60.094 45.455 0.91 0.00 39.07 3.18
1254 5327 0.321653 AAAGCTCGGAAACATCGCCT 60.322 50.000 0.00 0.00 0.00 5.52
1320 5393 3.346315 CCAGTTATTGGTCATGACAGCA 58.654 45.455 26.47 13.85 42.41 4.41
1362 5435 2.747686 GCACCTTTCCCTGGACGA 59.252 61.111 0.00 0.00 0.00 4.20
1379 5452 3.263941 GTGGCTTAGGCAACCACG 58.736 61.111 10.78 0.00 44.02 4.94
1419 5492 4.644234 TCTCCAAGAAAAGCAATGTCAACA 59.356 37.500 0.00 0.00 0.00 3.33
1461 5534 1.480954 GAAATACGGTCCTCTGCCTCA 59.519 52.381 0.00 0.00 0.00 3.86
1556 5637 4.183101 CCACACACTGCAACTTGAATTTT 58.817 39.130 0.00 0.00 0.00 1.82
1613 5694 5.944007 ACCACATCTTTACAACCCTTATCAC 59.056 40.000 0.00 0.00 0.00 3.06
1623 5704 8.458573 AACTATTTGTGACCACATCTTTACAA 57.541 30.769 3.47 0.00 41.52 2.41
1624 5705 8.458573 AAACTATTTGTGACCACATCTTTACA 57.541 30.769 3.47 0.00 41.52 2.41
1629 5710 6.207417 CCTCAAAACTATTTGTGACCACATCT 59.793 38.462 3.47 0.00 45.02 2.90
1718 5802 1.872952 CGAGAATTATGCCATCGCCAA 59.127 47.619 0.00 0.00 0.00 4.52
1731 5815 0.753262 ATGTAGCGCCCTCGAGAATT 59.247 50.000 15.71 0.00 38.10 2.17
1805 5889 4.474651 TCCCATGTGACTCAATCAGGTATT 59.525 41.667 0.00 0.00 38.28 1.89
1890 5975 4.723789 ACATCCATCTCATAAACCTCCACT 59.276 41.667 0.00 0.00 0.00 4.00
1935 6020 0.984230 CTAGCCCACCTGAAACTGGA 59.016 55.000 0.00 0.00 0.00 3.86
2151 6236 3.062042 CCACTGATTTTCAAGCAAAGGC 58.938 45.455 0.00 0.00 41.61 4.35
2234 6366 4.391830 ACCGTGTACACTTTTCATGCATAG 59.608 41.667 23.01 0.00 0.00 2.23
2311 6444 9.270576 CTCATTAGATTGTTGATCGTTTGAAAG 57.729 33.333 0.00 0.00 39.85 2.62
2344 6477 1.074752 CCAGCGAGCTCTTTCAGAAC 58.925 55.000 12.85 0.00 0.00 3.01
2392 6525 6.763715 ACCATTTGCCTCTCTACCAATATA 57.236 37.500 0.00 0.00 0.00 0.86
2393 6526 5.653255 ACCATTTGCCTCTCTACCAATAT 57.347 39.130 0.00 0.00 0.00 1.28
2394 6527 6.763715 ATACCATTTGCCTCTCTACCAATA 57.236 37.500 0.00 0.00 0.00 1.90
2498 6634 7.824779 GGACTTACAATCTGAGTTCATAAAGGT 59.175 37.037 0.00 0.00 0.00 3.50
2503 6639 6.525578 ACGGACTTACAATCTGAGTTCATA 57.474 37.500 0.00 0.00 0.00 2.15
2522 6658 1.621317 TCATGGCACTTACTCAACGGA 59.379 47.619 0.00 0.00 0.00 4.69
2525 6661 8.986477 AAATAAAATCATGGCACTTACTCAAC 57.014 30.769 0.00 0.00 0.00 3.18
2570 6706 5.997746 TCCCTCTGTTTCAAGATAAGTGTTG 59.002 40.000 0.00 0.00 0.00 3.33
2571 6707 6.183361 ACTCCCTCTGTTTCAAGATAAGTGTT 60.183 38.462 0.00 0.00 0.00 3.32
2580 6716 9.372369 CTTAGTTTATACTCCCTCTGTTTCAAG 57.628 37.037 0.00 0.00 35.78 3.02
2587 6723 9.152595 GTGTTTTCTTAGTTTATACTCCCTCTG 57.847 37.037 0.00 0.00 35.78 3.35
2588 6724 9.102453 AGTGTTTTCTTAGTTTATACTCCCTCT 57.898 33.333 0.00 0.00 35.78 3.69
2630 6766 5.762218 ACTGCTTTGATGCTGGAGTATTATC 59.238 40.000 0.00 0.00 36.43 1.75
2648 6784 3.449018 AGATCGACCATGTTCTACTGCTT 59.551 43.478 0.00 0.00 0.00 3.91
2650 6786 3.444703 AGATCGACCATGTTCTACTGC 57.555 47.619 0.00 0.00 0.00 4.40
2672 6808 1.202879 TCTGGAGCGTTGGGTTTCAAT 60.203 47.619 0.00 0.00 37.73 2.57
2673 6809 0.181587 TCTGGAGCGTTGGGTTTCAA 59.818 50.000 0.00 0.00 0.00 2.69
2674 6810 0.250295 CTCTGGAGCGTTGGGTTTCA 60.250 55.000 0.00 0.00 0.00 2.69
2675 6811 0.250338 ACTCTGGAGCGTTGGGTTTC 60.250 55.000 0.00 0.00 0.00 2.78
2676 6812 0.250338 GACTCTGGAGCGTTGGGTTT 60.250 55.000 0.00 0.00 0.00 3.27
2677 6813 1.371558 GACTCTGGAGCGTTGGGTT 59.628 57.895 0.00 0.00 0.00 4.11
2678 6814 2.932234 CGACTCTGGAGCGTTGGGT 61.932 63.158 0.00 0.00 0.00 4.51
2679 6815 2.125912 CGACTCTGGAGCGTTGGG 60.126 66.667 0.00 0.00 0.00 4.12
2680 6816 1.444553 GACGACTCTGGAGCGTTGG 60.445 63.158 16.28 0.00 39.74 3.77
2681 6817 1.444553 GGACGACTCTGGAGCGTTG 60.445 63.158 16.28 1.08 39.74 4.10
2682 6818 1.179814 AAGGACGACTCTGGAGCGTT 61.180 55.000 16.28 4.68 39.74 4.84
2683 6819 1.587933 GAAGGACGACTCTGGAGCGT 61.588 60.000 15.55 15.55 41.32 5.07
2684 6820 1.137825 GAAGGACGACTCTGGAGCG 59.862 63.158 10.89 10.89 35.30 5.03
2685 6821 0.892063 AAGAAGGACGACTCTGGAGC 59.108 55.000 0.00 0.00 0.00 4.70
2686 6822 3.321497 CAAAAGAAGGACGACTCTGGAG 58.679 50.000 0.00 0.00 0.00 3.86
2687 6823 2.037251 CCAAAAGAAGGACGACTCTGGA 59.963 50.000 0.00 0.00 0.00 3.86
2688 6824 2.037251 TCCAAAAGAAGGACGACTCTGG 59.963 50.000 0.00 0.00 0.00 3.86
2689 6825 3.386768 TCCAAAAGAAGGACGACTCTG 57.613 47.619 0.00 0.00 0.00 3.35
2690 6826 4.417426 TTTCCAAAAGAAGGACGACTCT 57.583 40.909 0.00 0.00 35.40 3.24
2691 6827 6.796705 TTATTTCCAAAAGAAGGACGACTC 57.203 37.500 0.00 0.00 35.40 3.36
2692 6828 6.940298 TCATTATTTCCAAAAGAAGGACGACT 59.060 34.615 0.00 0.00 35.40 4.18
2693 6829 7.141100 TCATTATTTCCAAAAGAAGGACGAC 57.859 36.000 0.00 0.00 35.40 4.34
2694 6830 7.753309 TTCATTATTTCCAAAAGAAGGACGA 57.247 32.000 0.00 0.00 35.40 4.20
2695 6831 8.986477 ATTTCATTATTTCCAAAAGAAGGACG 57.014 30.769 0.00 0.00 35.40 4.79
2718 6854 9.425248 TCCCTGCTGATTGATTTCTTTATTATT 57.575 29.630 0.00 0.00 0.00 1.40
2719 6855 9.075678 CTCCCTGCTGATTGATTTCTTTATTAT 57.924 33.333 0.00 0.00 0.00 1.28
2720 6856 7.013655 GCTCCCTGCTGATTGATTTCTTTATTA 59.986 37.037 0.00 0.00 38.95 0.98
2721 6857 6.183360 GCTCCCTGCTGATTGATTTCTTTATT 60.183 38.462 0.00 0.00 38.95 1.40
2722 6858 5.301298 GCTCCCTGCTGATTGATTTCTTTAT 59.699 40.000 0.00 0.00 38.95 1.40
2723 6859 4.641989 GCTCCCTGCTGATTGATTTCTTTA 59.358 41.667 0.00 0.00 38.95 1.85
2724 6860 3.446516 GCTCCCTGCTGATTGATTTCTTT 59.553 43.478 0.00 0.00 38.95 2.52
2725 6861 3.022406 GCTCCCTGCTGATTGATTTCTT 58.978 45.455 0.00 0.00 38.95 2.52
2726 6862 2.652590 GCTCCCTGCTGATTGATTTCT 58.347 47.619 0.00 0.00 38.95 2.52
2743 6879 1.672145 GGACGTTGTGGGAGTTAGCTC 60.672 57.143 0.00 0.00 40.93 4.09
2744 6880 0.320697 GGACGTTGTGGGAGTTAGCT 59.679 55.000 0.00 0.00 0.00 3.32
2745 6881 1.012486 CGGACGTTGTGGGAGTTAGC 61.012 60.000 0.00 0.00 0.00 3.09
2746 6882 0.316204 ACGGACGTTGTGGGAGTTAG 59.684 55.000 0.00 0.00 0.00 2.34
2747 6883 1.269448 GTACGGACGTTGTGGGAGTTA 59.731 52.381 1.57 0.00 0.00 2.24
2748 6884 0.032540 GTACGGACGTTGTGGGAGTT 59.967 55.000 1.57 0.00 0.00 3.01
2749 6885 1.662044 GTACGGACGTTGTGGGAGT 59.338 57.895 1.57 0.00 0.00 3.85
2750 6886 1.443194 CGTACGGACGTTGTGGGAG 60.443 63.158 13.28 0.00 44.31 4.30
2751 6887 2.644418 CGTACGGACGTTGTGGGA 59.356 61.111 13.28 0.00 44.31 4.37
2764 6900 0.801251 AGAGCTCCACACGTACGTAC 59.199 55.000 22.34 15.90 0.00 3.67
2765 6901 1.466167 GAAGAGCTCCACACGTACGTA 59.534 52.381 22.34 4.29 0.00 3.57
2766 6902 0.240411 GAAGAGCTCCACACGTACGT 59.760 55.000 16.72 16.72 0.00 3.57
2767 6903 0.456312 GGAAGAGCTCCACACGTACG 60.456 60.000 15.01 15.01 44.67 3.67
2768 6904 3.420397 GGAAGAGCTCCACACGTAC 57.580 57.895 10.93 0.00 44.67 3.67
2776 6912 0.251634 CAAGGTGGAGGAAGAGCTCC 59.748 60.000 10.93 0.00 45.81 4.70
2777 6913 1.206849 CTCAAGGTGGAGGAAGAGCTC 59.793 57.143 5.27 5.27 0.00 4.09
2778 6914 1.274712 CTCAAGGTGGAGGAAGAGCT 58.725 55.000 0.00 0.00 0.00 4.09
2779 6915 0.392327 GCTCAAGGTGGAGGAAGAGC 60.392 60.000 0.00 0.00 41.21 4.09
2780 6916 0.108424 CGCTCAAGGTGGAGGAAGAG 60.108 60.000 0.00 0.00 35.41 2.85
2781 6917 1.975327 CGCTCAAGGTGGAGGAAGA 59.025 57.895 0.00 0.00 35.41 2.87
2782 6918 1.743252 GCGCTCAAGGTGGAGGAAG 60.743 63.158 0.00 0.00 35.41 3.46
2783 6919 2.347490 GCGCTCAAGGTGGAGGAA 59.653 61.111 0.00 0.00 35.41 3.36
2784 6920 2.922503 TGCGCTCAAGGTGGAGGA 60.923 61.111 9.73 0.00 35.41 3.71
2785 6921 2.743928 GTGCGCTCAAGGTGGAGG 60.744 66.667 9.73 0.00 35.41 4.30
2786 6922 2.743928 GGTGCGCTCAAGGTGGAG 60.744 66.667 9.73 0.00 37.97 3.86
2787 6923 4.329545 GGGTGCGCTCAAGGTGGA 62.330 66.667 9.73 0.00 0.00 4.02
2788 6924 4.641645 TGGGTGCGCTCAAGGTGG 62.642 66.667 9.73 0.00 0.00 4.61
2789 6925 3.052082 CTGGGTGCGCTCAAGGTG 61.052 66.667 9.73 0.00 0.00 4.00
2807 6943 3.939837 TTGAGGCAAGGCGAGCGAG 62.940 63.158 0.00 0.00 0.00 5.03
2808 6944 4.002506 TTGAGGCAAGGCGAGCGA 62.003 61.111 0.00 0.00 0.00 4.93
2809 6945 3.793144 GTTGAGGCAAGGCGAGCG 61.793 66.667 0.00 0.00 0.00 5.03
2810 6946 3.793144 CGTTGAGGCAAGGCGAGC 61.793 66.667 0.00 0.00 0.00 5.03
2811 6947 3.121030 CCGTTGAGGCAAGGCGAG 61.121 66.667 0.00 0.00 0.00 5.03
2812 6948 3.621805 TCCGTTGAGGCAAGGCGA 61.622 61.111 0.00 0.00 40.77 5.54
2813 6949 3.423154 GTCCGTTGAGGCAAGGCG 61.423 66.667 0.00 0.00 40.77 5.52
2814 6950 3.056328 GGTCCGTTGAGGCAAGGC 61.056 66.667 0.00 0.00 40.77 4.35
2815 6951 2.359975 GGGTCCGTTGAGGCAAGG 60.360 66.667 0.00 0.00 40.77 3.61
2816 6952 1.376037 GAGGGTCCGTTGAGGCAAG 60.376 63.158 0.00 0.00 40.77 4.01
2817 6953 1.415672 AAGAGGGTCCGTTGAGGCAA 61.416 55.000 0.00 0.00 40.77 4.52
2818 6954 1.415672 AAAGAGGGTCCGTTGAGGCA 61.416 55.000 0.00 0.00 40.77 4.75
2819 6955 0.673956 GAAAGAGGGTCCGTTGAGGC 60.674 60.000 0.00 0.00 40.77 4.70
2820 6956 0.036294 GGAAAGAGGGTCCGTTGAGG 60.036 60.000 0.00 0.00 42.97 3.86
2821 6957 0.685097 TGGAAAGAGGGTCCGTTGAG 59.315 55.000 0.00 0.00 38.06 3.02
2822 6958 0.395312 GTGGAAAGAGGGTCCGTTGA 59.605 55.000 0.00 0.00 38.06 3.18
2823 6959 0.605589 GGTGGAAAGAGGGTCCGTTG 60.606 60.000 0.00 0.00 38.06 4.10
2824 6960 0.767060 AGGTGGAAAGAGGGTCCGTT 60.767 55.000 0.00 0.00 38.06 4.44
2825 6961 0.767060 AAGGTGGAAAGAGGGTCCGT 60.767 55.000 0.00 0.00 38.06 4.69
2826 6962 0.036294 GAAGGTGGAAAGAGGGTCCG 60.036 60.000 0.00 0.00 38.06 4.79
2827 6963 1.279558 GAGAAGGTGGAAAGAGGGTCC 59.720 57.143 0.00 0.00 35.55 4.46
2828 6964 1.279558 GGAGAAGGTGGAAAGAGGGTC 59.720 57.143 0.00 0.00 0.00 4.46
2829 6965 1.132365 AGGAGAAGGTGGAAAGAGGGT 60.132 52.381 0.00 0.00 0.00 4.34
2830 6966 1.662686 AGGAGAAGGTGGAAAGAGGG 58.337 55.000 0.00 0.00 0.00 4.30
2831 6967 2.909662 AGAAGGAGAAGGTGGAAAGAGG 59.090 50.000 0.00 0.00 0.00 3.69
2832 6968 3.837731 AGAGAAGGAGAAGGTGGAAAGAG 59.162 47.826 0.00 0.00 0.00 2.85
2833 6969 3.835395 GAGAGAAGGAGAAGGTGGAAAGA 59.165 47.826 0.00 0.00 0.00 2.52
2834 6970 3.055458 GGAGAGAAGGAGAAGGTGGAAAG 60.055 52.174 0.00 0.00 0.00 2.62
2835 6971 2.907042 GGAGAGAAGGAGAAGGTGGAAA 59.093 50.000 0.00 0.00 0.00 3.13
2836 6972 2.112691 AGGAGAGAAGGAGAAGGTGGAA 59.887 50.000 0.00 0.00 0.00 3.53
2837 6973 1.719378 AGGAGAGAAGGAGAAGGTGGA 59.281 52.381 0.00 0.00 0.00 4.02
2838 6974 2.107366 GAGGAGAGAAGGAGAAGGTGG 58.893 57.143 0.00 0.00 0.00 4.61
2839 6975 3.023832 GAGAGGAGAGAAGGAGAAGGTG 58.976 54.545 0.00 0.00 0.00 4.00
2840 6976 2.926329 AGAGAGGAGAGAAGGAGAAGGT 59.074 50.000 0.00 0.00 0.00 3.50
2841 6977 3.669939 AGAGAGGAGAGAAGGAGAAGG 57.330 52.381 0.00 0.00 0.00 3.46
2842 6978 3.627577 CGAAGAGAGGAGAGAAGGAGAAG 59.372 52.174 0.00 0.00 0.00 2.85
2843 6979 3.009695 ACGAAGAGAGGAGAGAAGGAGAA 59.990 47.826 0.00 0.00 0.00 2.87
2844 6980 2.574369 ACGAAGAGAGGAGAGAAGGAGA 59.426 50.000 0.00 0.00 0.00 3.71
2845 6981 2.943033 GACGAAGAGAGGAGAGAAGGAG 59.057 54.545 0.00 0.00 0.00 3.69
2846 6982 2.356330 GGACGAAGAGAGGAGAGAAGGA 60.356 54.545 0.00 0.00 0.00 3.36
2847 6983 2.021457 GGACGAAGAGAGGAGAGAAGG 58.979 57.143 0.00 0.00 0.00 3.46
2848 6984 2.682856 CTGGACGAAGAGAGGAGAGAAG 59.317 54.545 0.00 0.00 0.00 2.85
2849 6985 2.717390 CTGGACGAAGAGAGGAGAGAA 58.283 52.381 0.00 0.00 0.00 2.87
2850 6986 1.680555 GCTGGACGAAGAGAGGAGAGA 60.681 57.143 0.00 0.00 0.00 3.10
2851 6987 0.738389 GCTGGACGAAGAGAGGAGAG 59.262 60.000 0.00 0.00 0.00 3.20
2852 6988 0.038310 TGCTGGACGAAGAGAGGAGA 59.962 55.000 0.00 0.00 0.00 3.71
2853 6989 0.455410 CTGCTGGACGAAGAGAGGAG 59.545 60.000 0.00 0.00 0.00 3.69
2854 6990 1.599606 GCTGCTGGACGAAGAGAGGA 61.600 60.000 0.00 0.00 0.00 3.71
2855 6991 1.153667 GCTGCTGGACGAAGAGAGG 60.154 63.158 0.00 0.00 0.00 3.69
2856 6992 0.735632 GTGCTGCTGGACGAAGAGAG 60.736 60.000 0.00 0.00 0.00 3.20
2857 6993 1.290324 GTGCTGCTGGACGAAGAGA 59.710 57.895 0.00 0.00 0.00 3.10
2858 6994 1.005748 TGTGCTGCTGGACGAAGAG 60.006 57.895 10.50 0.00 37.34 2.85
2859 6995 1.005748 CTGTGCTGCTGGACGAAGA 60.006 57.895 10.50 0.00 37.34 2.87
2860 6996 2.675056 GCTGTGCTGCTGGACGAAG 61.675 63.158 10.50 4.73 37.34 3.79
2861 6997 2.666190 GCTGTGCTGCTGGACGAA 60.666 61.111 10.50 0.00 37.34 3.85
2862 6998 4.687215 GGCTGTGCTGCTGGACGA 62.687 66.667 10.50 0.00 37.34 4.20
2863 6999 4.994471 TGGCTGTGCTGCTGGACG 62.994 66.667 10.50 6.72 37.34 4.79
2864 7000 3.054503 CTGGCTGTGCTGCTGGAC 61.055 66.667 8.33 8.33 34.96 4.02
2867 7003 3.432588 GAGCTGGCTGTGCTGCTG 61.433 66.667 12.93 0.00 41.30 4.41
2868 7004 3.949980 TGAGCTGGCTGTGCTGCT 61.950 61.111 0.00 9.35 41.30 4.24
2869 7005 3.735029 GTGAGCTGGCTGTGCTGC 61.735 66.667 0.00 0.00 41.30 5.25
2870 7006 3.054503 GGTGAGCTGGCTGTGCTG 61.055 66.667 0.00 0.00 41.30 4.41
2871 7007 4.694233 CGGTGAGCTGGCTGTGCT 62.694 66.667 0.00 0.38 44.24 4.40
2905 7041 4.880537 ATGAAGGAGGAGCGCGCG 62.881 66.667 28.44 28.44 0.00 6.86
2906 7042 2.964389 GATGAAGGAGGAGCGCGC 60.964 66.667 26.66 26.66 0.00 6.86
2907 7043 1.150567 CTTGATGAAGGAGGAGCGCG 61.151 60.000 0.00 0.00 0.00 6.86
2908 7044 1.435408 GCTTGATGAAGGAGGAGCGC 61.435 60.000 0.00 0.00 0.00 5.92
2909 7045 0.107993 TGCTTGATGAAGGAGGAGCG 60.108 55.000 0.00 0.00 33.03 5.03
2910 7046 2.220313 GATGCTTGATGAAGGAGGAGC 58.780 52.381 0.00 0.00 32.35 4.70
2911 7047 2.486907 GGGATGCTTGATGAAGGAGGAG 60.487 54.545 0.00 0.00 32.35 3.69
2912 7048 1.492176 GGGATGCTTGATGAAGGAGGA 59.508 52.381 0.00 0.00 32.35 3.71
2913 7049 1.813092 CGGGATGCTTGATGAAGGAGG 60.813 57.143 0.00 0.00 32.35 4.30
2914 7050 1.590932 CGGGATGCTTGATGAAGGAG 58.409 55.000 0.00 0.00 32.35 3.69
2915 7051 0.181114 CCGGGATGCTTGATGAAGGA 59.819 55.000 0.00 0.00 33.52 3.36
2916 7052 0.820891 CCCGGGATGCTTGATGAAGG 60.821 60.000 18.48 0.00 0.00 3.46
2917 7053 1.450531 GCCCGGGATGCTTGATGAAG 61.451 60.000 29.31 0.00 0.00 3.02
2918 7054 1.453745 GCCCGGGATGCTTGATGAA 60.454 57.895 29.31 0.00 0.00 2.57
2919 7055 2.192979 GCCCGGGATGCTTGATGA 59.807 61.111 29.31 0.00 0.00 2.92
2920 7056 2.124193 TGCCCGGGATGCTTGATG 60.124 61.111 29.31 0.00 0.00 3.07
2921 7057 2.124151 GTGCCCGGGATGCTTGAT 60.124 61.111 29.31 0.00 0.00 2.57
2922 7058 4.424711 GGTGCCCGGGATGCTTGA 62.425 66.667 29.31 0.00 0.00 3.02
2933 7069 3.813724 CTGGAGGATGGGGTGCCC 61.814 72.222 0.00 0.00 45.71 5.36
2934 7070 1.649271 AATCTGGAGGATGGGGTGCC 61.649 60.000 0.00 0.00 34.45 5.01
2935 7071 1.072965 CTAATCTGGAGGATGGGGTGC 59.927 57.143 0.00 0.00 34.45 5.01
2936 7072 2.370189 GTCTAATCTGGAGGATGGGGTG 59.630 54.545 0.00 0.00 34.45 4.61
2937 7073 2.695585 GTCTAATCTGGAGGATGGGGT 58.304 52.381 0.00 0.00 34.45 4.95
2938 7074 1.981495 GGTCTAATCTGGAGGATGGGG 59.019 57.143 0.00 0.00 34.45 4.96
2939 7075 2.694397 TGGTCTAATCTGGAGGATGGG 58.306 52.381 0.00 0.00 34.45 4.00
2940 7076 3.493350 CGTTGGTCTAATCTGGAGGATGG 60.493 52.174 0.00 0.00 34.45 3.51
2941 7077 3.493350 CCGTTGGTCTAATCTGGAGGATG 60.493 52.174 0.00 0.00 34.45 3.51
2942 7078 2.700897 CCGTTGGTCTAATCTGGAGGAT 59.299 50.000 0.00 0.00 35.97 3.24
2943 7079 2.108168 CCGTTGGTCTAATCTGGAGGA 58.892 52.381 0.00 0.00 0.00 3.71
2944 7080 1.831736 ACCGTTGGTCTAATCTGGAGG 59.168 52.381 0.00 0.00 0.00 4.30
2945 7081 2.418746 CCACCGTTGGTCTAATCTGGAG 60.419 54.545 0.00 0.00 38.23 3.86
2946 7082 1.553248 CCACCGTTGGTCTAATCTGGA 59.447 52.381 0.00 0.00 38.23 3.86
2947 7083 1.553248 TCCACCGTTGGTCTAATCTGG 59.447 52.381 0.00 0.00 44.35 3.86
2948 7084 2.418746 CCTCCACCGTTGGTCTAATCTG 60.419 54.545 0.00 0.00 44.35 2.90
2949 7085 1.831736 CCTCCACCGTTGGTCTAATCT 59.168 52.381 0.00 0.00 44.35 2.40
2950 7086 1.829222 TCCTCCACCGTTGGTCTAATC 59.171 52.381 0.00 0.00 44.35 1.75
2951 7087 1.946984 TCCTCCACCGTTGGTCTAAT 58.053 50.000 0.00 0.00 44.35 1.73
2952 7088 1.345415 GTTCCTCCACCGTTGGTCTAA 59.655 52.381 0.00 0.00 44.35 2.10
2953 7089 0.971386 GTTCCTCCACCGTTGGTCTA 59.029 55.000 0.00 0.00 44.35 2.59
2954 7090 1.752833 GTTCCTCCACCGTTGGTCT 59.247 57.895 0.00 0.00 44.35 3.85
2955 7091 1.302271 GGTTCCTCCACCGTTGGTC 60.302 63.158 0.00 0.00 44.35 4.02
2956 7092 2.826003 GGGTTCCTCCACCGTTGGT 61.826 63.158 0.00 0.00 44.35 3.67
2957 7093 2.033602 GGGTTCCTCCACCGTTGG 59.966 66.667 0.00 0.00 45.56 3.77
2958 7094 2.033602 GGGGTTCCTCCACCGTTG 59.966 66.667 0.00 0.00 37.76 4.10
2959 7095 1.850755 ATGGGGTTCCTCCACCGTT 60.851 57.895 2.15 0.00 39.29 4.44
2960 7096 2.204090 ATGGGGTTCCTCCACCGT 60.204 61.111 2.15 0.00 39.29 4.83
2961 7097 2.272146 CATGGGGTTCCTCCACCG 59.728 66.667 2.15 0.00 39.29 4.94
2962 7098 2.683475 CCATGGGGTTCCTCCACC 59.317 66.667 2.85 0.00 39.29 4.61
2963 7099 2.043953 GCCATGGGGTTCCTCCAC 60.044 66.667 15.13 0.00 40.76 4.02
2964 7100 1.517538 AATGCCATGGGGTTCCTCCA 61.518 55.000 15.13 0.00 38.82 3.86
2965 7101 0.555769 TAATGCCATGGGGTTCCTCC 59.444 55.000 15.13 0.00 36.17 4.30
2966 7102 2.683211 ATAATGCCATGGGGTTCCTC 57.317 50.000 15.13 0.00 36.17 3.71
2967 7103 3.419732 AAATAATGCCATGGGGTTCCT 57.580 42.857 15.13 0.00 36.17 3.36
2968 7104 5.365314 TCTTTAAATAATGCCATGGGGTTCC 59.635 40.000 15.13 0.00 36.17 3.62
2969 7105 6.323739 TCTCTTTAAATAATGCCATGGGGTTC 59.676 38.462 15.13 0.00 36.17 3.62
2970 7106 6.201591 TCTCTTTAAATAATGCCATGGGGTT 58.798 36.000 15.13 0.00 36.17 4.11
2971 7107 5.776358 TCTCTTTAAATAATGCCATGGGGT 58.224 37.500 15.13 0.00 36.17 4.95
2972 7108 6.070656 TCTCTCTTTAAATAATGCCATGGGG 58.929 40.000 15.13 0.00 37.18 4.96
2973 7109 7.587037 TTCTCTCTTTAAATAATGCCATGGG 57.413 36.000 15.13 0.00 0.00 4.00
2974 7110 8.636213 ACATTCTCTCTTTAAATAATGCCATGG 58.364 33.333 7.63 7.63 0.00 3.66
2975 7111 9.459640 CACATTCTCTCTTTAAATAATGCCATG 57.540 33.333 0.00 0.00 0.00 3.66
2976 7112 9.412460 TCACATTCTCTCTTTAAATAATGCCAT 57.588 29.630 0.00 0.00 0.00 4.40
2977 7113 8.806429 TCACATTCTCTCTTTAAATAATGCCA 57.194 30.769 0.00 0.00 0.00 4.92
2978 7114 9.113838 TCTCACATTCTCTCTTTAAATAATGCC 57.886 33.333 0.00 0.00 0.00 4.40
2979 7115 9.928236 GTCTCACATTCTCTCTTTAAATAATGC 57.072 33.333 0.00 0.00 0.00 3.56
2982 7118 9.996554 TGTGTCTCACATTCTCTCTTTAAATAA 57.003 29.630 0.00 0.00 39.62 1.40
2999 7135 6.640518 TCTTAGGTCCAATTATGTGTCTCAC 58.359 40.000 0.00 0.00 34.56 3.51
3000 7136 6.127054 CCTCTTAGGTCCAATTATGTGTCTCA 60.127 42.308 0.00 0.00 0.00 3.27
3001 7137 6.284459 CCTCTTAGGTCCAATTATGTGTCTC 58.716 44.000 0.00 0.00 0.00 3.36
3002 7138 5.131142 CCCTCTTAGGTCCAATTATGTGTCT 59.869 44.000 0.00 0.00 31.93 3.41
3003 7139 5.368989 CCCTCTTAGGTCCAATTATGTGTC 58.631 45.833 0.00 0.00 31.93 3.67
3004 7140 4.166144 CCCCTCTTAGGTCCAATTATGTGT 59.834 45.833 0.00 0.00 31.93 3.72
3005 7141 4.166144 ACCCCTCTTAGGTCCAATTATGTG 59.834 45.833 0.00 0.00 31.93 3.21
3006 7142 4.380791 ACCCCTCTTAGGTCCAATTATGT 58.619 43.478 0.00 0.00 31.93 2.29
3007 7143 5.104109 TCAACCCCTCTTAGGTCCAATTATG 60.104 44.000 0.00 0.00 36.27 1.90
3008 7144 5.043762 TCAACCCCTCTTAGGTCCAATTAT 58.956 41.667 0.00 0.00 36.27 1.28
3009 7145 4.440808 TCAACCCCTCTTAGGTCCAATTA 58.559 43.478 0.00 0.00 36.27 1.40
3010 7146 3.265489 TCAACCCCTCTTAGGTCCAATT 58.735 45.455 0.00 0.00 36.27 2.32
3011 7147 2.929301 TCAACCCCTCTTAGGTCCAAT 58.071 47.619 0.00 0.00 36.27 3.16
3012 7148 2.426431 TCAACCCCTCTTAGGTCCAA 57.574 50.000 0.00 0.00 36.27 3.53
3013 7149 2.374170 GTTTCAACCCCTCTTAGGTCCA 59.626 50.000 0.00 0.00 36.27 4.02
3014 7150 2.643304 AGTTTCAACCCCTCTTAGGTCC 59.357 50.000 0.00 0.00 36.27 4.46
3015 7151 3.326880 TGAGTTTCAACCCCTCTTAGGTC 59.673 47.826 0.00 0.00 36.27 3.85
3016 7152 3.323775 TGAGTTTCAACCCCTCTTAGGT 58.676 45.455 0.00 0.00 40.14 3.08
3017 7153 3.307762 CCTGAGTTTCAACCCCTCTTAGG 60.308 52.174 0.00 0.00 34.30 2.69
3018 7154 3.328050 ACCTGAGTTTCAACCCCTCTTAG 59.672 47.826 0.00 0.00 0.00 2.18
3019 7155 3.323775 ACCTGAGTTTCAACCCCTCTTA 58.676 45.455 0.00 0.00 0.00 2.10
3020 7156 2.106684 GACCTGAGTTTCAACCCCTCTT 59.893 50.000 0.00 0.00 0.00 2.85
3021 7157 1.700186 GACCTGAGTTTCAACCCCTCT 59.300 52.381 0.00 0.00 0.00 3.69
3022 7158 1.420138 TGACCTGAGTTTCAACCCCTC 59.580 52.381 0.00 0.00 0.00 4.30
3023 7159 1.421646 CTGACCTGAGTTTCAACCCCT 59.578 52.381 0.00 0.00 0.00 4.79
3024 7160 1.897560 CTGACCTGAGTTTCAACCCC 58.102 55.000 0.00 0.00 0.00 4.95
3025 7161 1.202818 AGCTGACCTGAGTTTCAACCC 60.203 52.381 0.00 0.00 0.00 4.11
3026 7162 2.262423 AGCTGACCTGAGTTTCAACC 57.738 50.000 0.00 0.00 0.00 3.77
3027 7163 3.330267 CCTAGCTGACCTGAGTTTCAAC 58.670 50.000 0.00 0.00 0.00 3.18
3028 7164 2.289694 GCCTAGCTGACCTGAGTTTCAA 60.290 50.000 0.00 0.00 0.00 2.69
3029 7165 1.276421 GCCTAGCTGACCTGAGTTTCA 59.724 52.381 0.00 0.00 0.00 2.69
3030 7166 1.737363 CGCCTAGCTGACCTGAGTTTC 60.737 57.143 0.00 0.00 0.00 2.78
3031 7167 0.247736 CGCCTAGCTGACCTGAGTTT 59.752 55.000 0.00 0.00 0.00 2.66
3032 7168 0.612174 TCGCCTAGCTGACCTGAGTT 60.612 55.000 0.00 0.00 0.00 3.01
3033 7169 0.612174 TTCGCCTAGCTGACCTGAGT 60.612 55.000 0.00 0.00 0.00 3.41
3034 7170 0.532573 TTTCGCCTAGCTGACCTGAG 59.467 55.000 0.00 0.00 0.00 3.35
3035 7171 0.532573 CTTTCGCCTAGCTGACCTGA 59.467 55.000 0.00 0.00 0.00 3.86
3036 7172 1.086634 GCTTTCGCCTAGCTGACCTG 61.087 60.000 0.00 0.00 35.74 4.00
3037 7173 1.219393 GCTTTCGCCTAGCTGACCT 59.781 57.895 0.00 0.00 35.74 3.85
3038 7174 0.673644 TTGCTTTCGCCTAGCTGACC 60.674 55.000 0.00 0.00 39.38 4.02
3039 7175 1.156736 TTTGCTTTCGCCTAGCTGAC 58.843 50.000 0.00 0.00 39.38 3.51
3040 7176 1.535462 GTTTTGCTTTCGCCTAGCTGA 59.465 47.619 0.00 0.00 39.38 4.26
3041 7177 1.725931 CGTTTTGCTTTCGCCTAGCTG 60.726 52.381 0.00 0.00 39.38 4.24
3042 7178 0.517316 CGTTTTGCTTTCGCCTAGCT 59.483 50.000 0.00 0.00 39.38 3.32
3043 7179 1.065572 GCGTTTTGCTTTCGCCTAGC 61.066 55.000 0.00 0.00 43.41 3.42
3044 7180 3.001576 GCGTTTTGCTTTCGCCTAG 57.998 52.632 0.00 0.00 43.41 3.02
3048 7184 4.319249 AAGGCGTTTTGCTTTCGC 57.681 50.000 0.00 0.00 38.78 4.70
3051 7187 4.319249 GCGAAGGCGTTTTGCTTT 57.681 50.000 9.28 0.00 46.87 3.51
3074 7210 3.617669 CAAAAATAATGGGCTCGTAGCG 58.382 45.455 0.00 0.00 43.62 4.26
3075 7211 3.181491 TGCAAAAATAATGGGCTCGTAGC 60.181 43.478 0.00 0.00 41.46 3.58
3076 7212 4.630894 TGCAAAAATAATGGGCTCGTAG 57.369 40.909 0.00 0.00 0.00 3.51
3077 7213 4.673061 CGTTGCAAAAATAATGGGCTCGTA 60.673 41.667 0.00 0.00 0.00 3.43
3078 7214 3.584834 GTTGCAAAAATAATGGGCTCGT 58.415 40.909 0.00 0.00 0.00 4.18
3079 7215 2.598192 CGTTGCAAAAATAATGGGCTCG 59.402 45.455 0.00 0.00 0.00 5.03
3080 7216 2.348362 GCGTTGCAAAAATAATGGGCTC 59.652 45.455 0.00 0.00 0.00 4.70
3081 7217 2.289320 TGCGTTGCAAAAATAATGGGCT 60.289 40.909 0.00 0.00 34.76 5.19
3082 7218 2.072298 TGCGTTGCAAAAATAATGGGC 58.928 42.857 0.00 0.00 34.76 5.36
3094 7230 7.087007 TGAATTAGAAACAATATTGCGTTGCA 58.913 30.769 15.48 0.51 36.47 4.08
3095 7231 7.504922 TGAATTAGAAACAATATTGCGTTGC 57.495 32.000 15.48 2.20 0.00 4.17
3096 7232 8.745837 GGATGAATTAGAAACAATATTGCGTTG 58.254 33.333 15.48 0.00 0.00 4.10
3097 7233 8.465999 TGGATGAATTAGAAACAATATTGCGTT 58.534 29.630 15.48 9.75 0.00 4.84
3098 7234 7.995289 TGGATGAATTAGAAACAATATTGCGT 58.005 30.769 15.48 3.24 0.00 5.24
3099 7235 7.113965 GCTGGATGAATTAGAAACAATATTGCG 59.886 37.037 15.48 0.00 0.00 4.85
3100 7236 7.922278 TGCTGGATGAATTAGAAACAATATTGC 59.078 33.333 15.48 0.00 0.00 3.56
3101 7237 9.806203 TTGCTGGATGAATTAGAAACAATATTG 57.194 29.630 14.01 14.01 0.00 1.90
3102 7238 9.807649 GTTGCTGGATGAATTAGAAACAATATT 57.192 29.630 0.00 0.00 31.60 1.28
3103 7239 9.193806 AGTTGCTGGATGAATTAGAAACAATAT 57.806 29.630 0.00 0.00 33.32 1.28
3104 7240 8.579850 AGTTGCTGGATGAATTAGAAACAATA 57.420 30.769 0.00 0.00 33.32 1.90
3105 7241 7.472334 AGTTGCTGGATGAATTAGAAACAAT 57.528 32.000 0.00 0.00 33.32 2.71
3106 7242 6.899393 AGTTGCTGGATGAATTAGAAACAA 57.101 33.333 0.00 0.00 33.32 2.83
3107 7243 6.899393 AAGTTGCTGGATGAATTAGAAACA 57.101 33.333 0.00 0.00 33.32 2.83
3108 7244 9.294030 CAATAAGTTGCTGGATGAATTAGAAAC 57.706 33.333 0.00 0.00 31.43 2.78
3109 7245 9.241919 TCAATAAGTTGCTGGATGAATTAGAAA 57.758 29.630 0.00 0.00 35.26 2.52
3110 7246 8.806429 TCAATAAGTTGCTGGATGAATTAGAA 57.194 30.769 0.00 0.00 35.26 2.10
3111 7247 8.985315 ATCAATAAGTTGCTGGATGAATTAGA 57.015 30.769 0.00 0.00 35.26 2.10
3112 7248 9.459640 CAATCAATAAGTTGCTGGATGAATTAG 57.540 33.333 0.00 0.00 35.26 1.73
3113 7249 8.970020 ACAATCAATAAGTTGCTGGATGAATTA 58.030 29.630 0.00 0.00 35.26 1.40
3114 7250 7.844009 ACAATCAATAAGTTGCTGGATGAATT 58.156 30.769 0.00 0.00 35.26 2.17
3115 7251 7.414222 ACAATCAATAAGTTGCTGGATGAAT 57.586 32.000 0.00 0.00 35.26 2.57
3116 7252 6.839124 ACAATCAATAAGTTGCTGGATGAA 57.161 33.333 0.00 0.00 35.26 2.57
3117 7253 7.112122 ACTACAATCAATAAGTTGCTGGATGA 58.888 34.615 0.00 0.00 35.26 2.92
3118 7254 7.325660 ACTACAATCAATAAGTTGCTGGATG 57.674 36.000 0.00 0.00 35.26 3.51
3119 7255 7.944729 AACTACAATCAATAAGTTGCTGGAT 57.055 32.000 0.00 0.00 35.26 3.41
3120 7256 7.759489 AAACTACAATCAATAAGTTGCTGGA 57.241 32.000 0.00 0.00 35.26 3.86
3121 7257 9.341899 GTAAAACTACAATCAATAAGTTGCTGG 57.658 33.333 0.00 0.00 35.26 4.85
3122 7258 9.051027 CGTAAAACTACAATCAATAAGTTGCTG 57.949 33.333 0.00 0.00 35.26 4.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.