Multiple sequence alignment - TraesCS1B01G381600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G381600 chr1B 100.000 6187 0 0 1 6187 614335470 614329284 0.000000e+00 11426.0
1 TraesCS1B01G381600 chr1B 87.143 140 13 4 5252 5388 426854771 426854634 2.990000e-33 154.0
2 TraesCS1B01G381600 chr1B 85.915 142 14 4 5252 5387 420912378 420912519 5.000000e-31 147.0
3 TraesCS1B01G381600 chr1A 92.171 2810 134 33 2478 5229 544202499 544199718 0.000000e+00 3892.0
4 TraesCS1B01G381600 chr1A 87.532 1540 99 30 562 2045 544204544 544203042 0.000000e+00 1694.0
5 TraesCS1B01G381600 chr1A 92.290 441 27 3 2047 2484 544202983 544202547 2.450000e-173 619.0
6 TraesCS1B01G381600 chr1A 95.276 254 12 0 5934 6187 552336400 552336653 2.690000e-108 403.0
7 TraesCS1B01G381600 chr1A 83.406 458 38 9 5399 5845 544199715 544199285 2.090000e-104 390.0
8 TraesCS1B01G381600 chr1A 84.514 381 32 9 78 437 544204912 544204538 9.870000e-93 351.0
9 TraesCS1B01G381600 chr1D 88.570 2091 158 30 1 2045 448434063 448432008 0.000000e+00 2462.0
10 TraesCS1B01G381600 chr1D 93.214 1503 60 19 2478 3952 448431464 448429976 0.000000e+00 2172.0
11 TraesCS1B01G381600 chr1D 95.439 1206 37 12 4028 5229 448429933 448428742 0.000000e+00 1906.0
12 TraesCS1B01G381600 chr1D 95.000 440 15 3 2048 2484 448431947 448431512 0.000000e+00 684.0
13 TraesCS1B01G381600 chr1D 87.939 456 46 6 5399 5845 448428739 448428284 4.250000e-146 529.0
14 TraesCS1B01G381600 chr1D 95.833 72 3 0 5855 5926 448428222 448428151 3.920000e-22 117.0
15 TraesCS1B01G381600 chr1D 100.000 30 0 0 4000 4029 448429978 448429949 8.660000e-04 56.5
16 TraesCS1B01G381600 chr4D 95.703 256 11 0 5932 6187 479376788 479377043 4.460000e-111 412.0
17 TraesCS1B01G381600 chr4D 100.000 30 0 0 5854 5883 365187646 365187675 8.660000e-04 56.5
18 TraesCS1B01G381600 chr5A 94.942 257 13 0 5931 6187 9330064 9329808 2.690000e-108 403.0
19 TraesCS1B01G381600 chr5A 94.531 256 14 0 5931 6186 444547577 444547322 4.490000e-106 396.0
20 TraesCS1B01G381600 chr5A 94.531 256 14 0 5932 6187 552558326 552558581 4.490000e-106 396.0
21 TraesCS1B01G381600 chr2B 94.942 257 13 0 5931 6187 785266809 785266553 2.690000e-108 403.0
22 TraesCS1B01G381600 chr2B 92.562 121 5 3 5252 5369 353764700 353764819 2.970000e-38 171.0
23 TraesCS1B01G381600 chr2B 89.516 124 7 5 5252 5369 354139856 354139979 1.070000e-32 152.0
24 TraesCS1B01G381600 chr7B 94.922 256 13 0 5932 6187 111939785 111940040 9.660000e-108 401.0
25 TraesCS1B01G381600 chr7B 100.000 32 0 0 5854 5885 33134036 33134005 6.700000e-05 60.2
26 TraesCS1B01G381600 chr6A 94.922 256 13 0 5932 6187 2935164 2935419 9.660000e-108 401.0
27 TraesCS1B01G381600 chr6A 91.844 282 20 3 5904 6184 89297859 89298138 2.090000e-104 390.0
28 TraesCS1B01G381600 chr3D 88.623 167 9 4 5226 5391 540547343 540547186 1.760000e-45 195.0
29 TraesCS1B01G381600 chr3D 82.432 74 4 3 5217 5288 520645524 520645458 8.660000e-04 56.5
30 TraesCS1B01G381600 chr7D 85.632 174 12 5 5225 5388 562409498 562409328 2.970000e-38 171.0
31 TraesCS1B01G381600 chr2D 88.079 151 7 4 5226 5372 177208198 177208055 1.070000e-37 169.0
32 TraesCS1B01G381600 chr5D 85.455 165 14 4 5226 5387 352933601 352933444 4.960000e-36 163.0
33 TraesCS1B01G381600 chr2A 86.620 142 10 7 5252 5387 398417774 398417636 1.390000e-31 148.0
34 TraesCS1B01G381600 chr2A 89.286 56 1 1 5225 5275 668305264 668305319 1.440000e-06 65.8
35 TraesCS1B01G381600 chr2A 85.714 56 3 1 5225 5275 124242235 124242180 3.000000e-03 54.7
36 TraesCS1B01G381600 chr5B 85.315 143 16 4 5252 5391 159524783 159524923 6.460000e-30 143.0
37 TraesCS1B01G381600 chr5B 94.915 59 3 0 5217 5275 94258572 94258514 6.600000e-15 93.5
38 TraesCS1B01G381600 chr6B 100.000 29 0 0 5218 5246 97934161 97934133 3.000000e-03 54.7
39 TraesCS1B01G381600 chr6B 100.000 29 0 0 5218 5246 222557217 222557189 3.000000e-03 54.7
40 TraesCS1B01G381600 chr4B 100.000 29 0 0 5218 5246 160412268 160412240 3.000000e-03 54.7
41 TraesCS1B01G381600 chr3B 100.000 29 0 0 5218 5246 517309703 517309731 3.000000e-03 54.7
42 TraesCS1B01G381600 chr3B 100.000 29 0 0 5218 5246 540372729 540372701 3.000000e-03 54.7
43 TraesCS1B01G381600 chr7A 100.000 28 0 0 5862 5889 711827717 711827744 1.100000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G381600 chr1B 614329284 614335470 6186 True 11426.000000 11426 100.000000 1 6187 1 chr1B.!!$R2 6186
1 TraesCS1B01G381600 chr1A 544199285 544204912 5627 True 1389.200000 3892 87.982600 78 5845 5 chr1A.!!$R1 5767
2 TraesCS1B01G381600 chr1D 448428151 448434063 5912 True 1132.357143 2462 93.713571 1 5926 7 chr1D.!!$R1 5925

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
322 341 0.529833 TGTTGGCAGGTGTTGTGTTG 59.470 50.000 0.00 0.0 0.00 3.33 F
1357 1451 0.243636 GTTTGCCCCTTGGTCGAATG 59.756 55.000 0.00 0.0 0.00 2.67 F
2201 2363 0.168348 GCAGCTGCAGTGTGATGAAG 59.832 55.000 33.36 0.0 41.59 3.02 F
3268 3509 2.158813 AGTGACTCGTTTGGTGGTGATT 60.159 45.455 0.00 0.0 0.00 2.57 F
3956 4211 2.661176 TGGAACAGGGGGAGTATCTT 57.339 50.000 0.00 0.0 33.73 2.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1560 1659 0.179000 CAGGGATAAAGAGGCAGCGT 59.821 55.000 0.00 0.00 0.00 5.07 R
2426 2588 2.221981 GCACTACTGCAGATAAATCGGC 59.778 50.000 23.35 8.78 46.11 5.54 R
3646 3900 1.492176 CAGAGGGGCACATATCAGGTT 59.508 52.381 0.00 0.00 0.00 3.50 R
4746 5028 0.610687 GTGTAGGAGGAGCAACAGCT 59.389 55.000 0.00 0.00 42.41 4.24 R
5447 5732 1.027255 AGCAGCAGAATGAGCAGCAG 61.027 55.000 5.41 0.00 45.53 4.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 7.812669 CCCATGTGTAAACTAAATCAAAGAACC 59.187 37.037 0.00 0.00 0.00 3.62
35 36 7.708998 TGTGTAAACTAAATCAAAGAACCACC 58.291 34.615 0.00 0.00 0.00 4.61
37 38 7.646526 GTGTAAACTAAATCAAAGAACCACCAC 59.353 37.037 0.00 0.00 0.00 4.16
50 51 1.893801 ACCACCACCGAAAGAGTAGAG 59.106 52.381 0.00 0.00 0.00 2.43
54 55 3.193691 CACCACCGAAAGAGTAGAGACAT 59.806 47.826 0.00 0.00 0.00 3.06
61 62 7.976734 CACCGAAAGAGTAGAGACATAGAAATT 59.023 37.037 0.00 0.00 0.00 1.82
239 257 7.510549 TTGTCTTTCCTTTGGAAGTCATAAG 57.489 36.000 0.00 0.00 43.06 1.73
320 339 1.666209 GCTGTTGGCAGGTGTTGTGT 61.666 55.000 0.00 0.00 42.78 3.72
322 341 0.529833 TGTTGGCAGGTGTTGTGTTG 59.470 50.000 0.00 0.00 0.00 3.33
339 358 3.313526 GTGTTGTGTTGCTCATCTGTTCT 59.686 43.478 0.00 0.00 0.00 3.01
343 362 4.702831 TGTGTTGCTCATCTGTTCTGTTA 58.297 39.130 0.00 0.00 0.00 2.41
344 363 5.122519 TGTGTTGCTCATCTGTTCTGTTAA 58.877 37.500 0.00 0.00 0.00 2.01
346 365 6.262944 TGTGTTGCTCATCTGTTCTGTTAATT 59.737 34.615 0.00 0.00 0.00 1.40
347 366 7.443879 TGTGTTGCTCATCTGTTCTGTTAATTA 59.556 33.333 0.00 0.00 0.00 1.40
348 367 7.959651 GTGTTGCTCATCTGTTCTGTTAATTAG 59.040 37.037 0.00 0.00 0.00 1.73
349 368 7.877612 TGTTGCTCATCTGTTCTGTTAATTAGA 59.122 33.333 0.00 0.00 0.00 2.10
350 369 7.834068 TGCTCATCTGTTCTGTTAATTAGAC 57.166 36.000 0.00 0.00 0.00 2.59
351 370 7.615403 TGCTCATCTGTTCTGTTAATTAGACT 58.385 34.615 0.00 0.00 0.00 3.24
354 373 8.134202 TCATCTGTTCTGTTAATTAGACTGGA 57.866 34.615 0.00 0.00 0.00 3.86
372 391 1.070758 GGAGATATCGCTGCCTTTGGA 59.929 52.381 6.41 0.00 0.00 3.53
415 437 3.703001 AGTCTGTATGAACCAGTTGGG 57.297 47.619 2.79 0.00 44.81 4.12
441 465 8.630054 TTTTCTTAATGAAAATCGAAGGGAGA 57.370 30.769 0.00 0.00 46.20 3.71
444 468 2.403252 TGAAAATCGAAGGGAGAGGC 57.597 50.000 0.00 0.00 0.00 4.70
445 469 1.065418 TGAAAATCGAAGGGAGAGGCC 60.065 52.381 0.00 0.00 0.00 5.19
449 473 0.833949 ATCGAAGGGAGAGGCCTTTC 59.166 55.000 14.99 14.99 46.37 2.62
457 481 6.402981 AAGGGAGAGGCCTTTCTTTTAATA 57.597 37.500 21.77 0.00 28.00 0.98
532 568 8.929260 TGAATGCTATCCTATGATCAATTGTT 57.071 30.769 5.13 0.00 32.18 2.83
545 581 5.580691 TGATCAATTGTTTACTCCGCACTAG 59.419 40.000 5.13 0.00 0.00 2.57
552 588 3.603158 TTACTCCGCACTAGCAATTCA 57.397 42.857 0.00 0.00 42.27 2.57
558 594 2.512885 CGCACTAGCAATTCAAAGCAG 58.487 47.619 0.00 0.00 42.27 4.24
560 596 3.727079 CGCACTAGCAATTCAAAGCAGAG 60.727 47.826 0.00 0.00 42.27 3.35
586 622 4.092091 CGTAGATGAAAACAAGAGGTGCTC 59.908 45.833 0.00 0.00 0.00 4.26
594 630 3.608316 ACAAGAGGTGCTCTGATCTTC 57.392 47.619 0.00 0.00 40.28 2.87
611 647 8.353684 TCTGATCTTCCTAGTAGCGAAATAAAG 58.646 37.037 0.00 0.00 0.00 1.85
619 655 3.516263 GCGAAATAAAGCTCCGCTG 57.484 52.632 0.00 0.00 39.62 5.18
624 660 2.185004 AATAAAGCTCCGCTGTGTGT 57.815 45.000 0.00 0.00 39.62 3.72
661 701 6.928492 CCTGCAATTATCTTCTCTTCTCCTAC 59.072 42.308 0.00 0.00 0.00 3.18
669 709 6.537453 TCTTCTCTTCTCCTACAATTCAGG 57.463 41.667 0.00 0.00 34.20 3.86
698 741 9.838339 ACCAGTTAAATAACAATATGAGAGGAG 57.162 33.333 6.13 0.00 38.62 3.69
753 803 0.890683 GGCCACCACCAAGATTCAAG 59.109 55.000 0.00 0.00 0.00 3.02
791 842 5.545723 TCCAGTGAGAAAAAGAGGAGATTCT 59.454 40.000 0.00 0.00 34.96 2.40
1338 1432 1.344763 GGTCGGTCAGATATCCCCTTG 59.655 57.143 0.00 0.00 0.00 3.61
1339 1433 2.040178 GTCGGTCAGATATCCCCTTGT 58.960 52.381 0.00 0.00 0.00 3.16
1357 1451 0.243636 GTTTGCCCCTTGGTCGAATG 59.756 55.000 0.00 0.00 0.00 2.67
1396 1490 1.343142 GGATGGGGGTGTTTGTGTTTC 59.657 52.381 0.00 0.00 0.00 2.78
1397 1491 1.343142 GATGGGGGTGTTTGTGTTTCC 59.657 52.381 0.00 0.00 0.00 3.13
1438 1537 2.725008 GGAGGACGATCTGAGGCG 59.275 66.667 0.00 1.81 0.00 5.52
1445 1544 2.586792 GATCTGAGGCGGCTGGTT 59.413 61.111 19.63 3.88 0.00 3.67
1557 1656 2.579878 TGCGAGAGGACCAAGGTAG 58.420 57.895 0.00 0.00 0.00 3.18
1560 1659 0.895530 CGAGAGGACCAAGGTAGCAA 59.104 55.000 0.00 0.00 0.00 3.91
1648 1747 2.165030 CAGGGTTTGGCTATTGCTCTTG 59.835 50.000 0.00 0.00 39.59 3.02
1667 1766 3.637821 TGGGGTTCAGCCTAGAGATAT 57.362 47.619 0.00 0.00 37.43 1.63
1686 1789 8.112822 AGAGATATTAGGCTAGATAGAAGCACA 58.887 37.037 0.00 0.00 41.93 4.57
1706 1809 8.574251 AGCACATTAAGATTTGTACCACATAA 57.426 30.769 0.00 0.00 0.00 1.90
1707 1810 8.677300 AGCACATTAAGATTTGTACCACATAAG 58.323 33.333 0.00 0.00 0.00 1.73
1708 1811 8.458843 GCACATTAAGATTTGTACCACATAAGT 58.541 33.333 0.00 0.00 0.00 2.24
1722 1825 5.163447 ACCACATAAGTACATCATAGCACGT 60.163 40.000 0.00 0.00 0.00 4.49
1754 1857 4.679639 CGATCAATTCAGGGGTTTAGTCGA 60.680 45.833 0.00 0.00 0.00 4.20
1780 1883 2.933906 GGATTAACATTTCGCTCGACCA 59.066 45.455 0.00 0.00 0.00 4.02
1825 1928 1.192146 GCCACCACCTGACCACTAGA 61.192 60.000 0.00 0.00 0.00 2.43
1843 1946 7.725844 ACCACTAGAAAAATTCTCAAAGATGGT 59.274 33.333 0.00 3.83 41.14 3.55
1844 1947 8.025445 CCACTAGAAAAATTCTCAAAGATGGTG 58.975 37.037 0.00 0.00 41.14 4.17
1845 1948 8.786898 CACTAGAAAAATTCTCAAAGATGGTGA 58.213 33.333 0.00 0.00 41.14 4.02
1953 2056 7.063308 CGTGTGAAATTAAGGCTTTGCAATTAT 59.937 33.333 4.45 0.00 0.00 1.28
2045 2149 5.281727 GGTTGTTTCTGGATTCTGAACAAC 58.718 41.667 17.39 17.39 39.09 3.32
2052 2214 3.057019 TGGATTCTGAACAACGTTCTCG 58.943 45.455 0.00 0.00 43.34 4.04
2066 2228 0.464373 TTCTCGAATGCAGGATGGCC 60.464 55.000 0.00 0.00 35.86 5.36
2068 2230 3.282157 CGAATGCAGGATGGCCCG 61.282 66.667 0.00 0.00 40.87 6.13
2201 2363 0.168348 GCAGCTGCAGTGTGATGAAG 59.832 55.000 33.36 0.00 41.59 3.02
2212 2374 4.447054 CAGTGTGATGAAGATAGCGGAATC 59.553 45.833 0.00 0.00 0.00 2.52
2413 2575 9.807649 TGTGCATCAGTGATATATATATGTGAC 57.192 33.333 10.03 3.36 0.00 3.67
2414 2576 9.807649 GTGCATCAGTGATATATATATGTGACA 57.192 33.333 10.03 0.00 0.00 3.58
2480 2642 6.643360 GGTTTTTGTACGGATGCAGTAATTTT 59.357 34.615 0.00 0.00 0.00 1.82
2484 2646 4.873827 TGTACGGATGCAGTAATTTTCTCC 59.126 41.667 0.00 0.00 0.00 3.71
2485 2647 4.222124 ACGGATGCAGTAATTTTCTCCT 57.778 40.909 0.00 0.00 0.00 3.69
2555 2772 8.738645 ATGTTCCTGGAGTAAATTACAGAATC 57.261 34.615 5.89 0.00 32.86 2.52
2558 2775 9.010029 GTTCCTGGAGTAAATTACAGAATCAAA 57.990 33.333 5.89 0.00 32.86 2.69
2618 2835 8.884124 TTCTAACCTGAAATTCAAGATTCCAT 57.116 30.769 0.00 0.00 0.00 3.41
2821 3042 8.771920 ACATGAAATCACTCGAACTAATGTTA 57.228 30.769 0.00 0.00 36.39 2.41
2941 3175 4.523943 TCACCTGAATGAAATTGAACCAGG 59.476 41.667 0.00 0.00 45.26 4.45
3207 3443 6.156949 AGTGAAGATTGATACAAGGCCTTCTA 59.843 38.462 17.29 9.37 32.27 2.10
3268 3509 2.158813 AGTGACTCGTTTGGTGGTGATT 60.159 45.455 0.00 0.00 0.00 2.57
3425 3678 9.098355 TCAAATGCAACTACTATATCACAACTC 57.902 33.333 0.00 0.00 0.00 3.01
3488 3741 7.175119 ACTTTGTCTAATAAAAGAACCTGAGGC 59.825 37.037 0.00 0.00 36.96 4.70
3492 3746 7.174946 TGTCTAATAAAAGAACCTGAGGCTTTG 59.825 37.037 0.00 0.00 32.63 2.77
3493 3747 7.175119 GTCTAATAAAAGAACCTGAGGCTTTGT 59.825 37.037 0.00 0.00 32.63 2.83
3498 3752 4.164843 AGAACCTGAGGCTTTGTGTAAA 57.835 40.909 0.00 0.00 0.00 2.01
3612 3866 6.017357 TGTGTACTGAGTTGTACTGAGTAGTG 60.017 42.308 6.43 0.00 43.68 2.74
3646 3900 9.841295 GTACCCATTGAGTTAATTTCCTGTATA 57.159 33.333 0.00 0.00 0.00 1.47
3661 3915 4.286032 TCCTGTATAACCTGATATGTGCCC 59.714 45.833 0.00 0.00 0.00 5.36
3708 3962 7.040340 TGGAACGAATAGAAAGTGCCATTTTAA 60.040 33.333 0.00 0.00 38.60 1.52
3813 4067 6.821665 TGCAGTAAATTCATCTACCAAGTACC 59.178 38.462 0.00 0.00 0.00 3.34
3832 4086 4.675063 ACCCTCCATTCCAAAACATAGT 57.325 40.909 0.00 0.00 0.00 2.12
3834 4088 4.202673 ACCCTCCATTCCAAAACATAGTGT 60.203 41.667 0.00 0.00 0.00 3.55
3887 4141 6.313905 CGTAAAGCTTGACCAAGTTCATAGAT 59.686 38.462 8.45 0.00 40.45 1.98
3949 4204 2.719705 ACACTATTTTGGAACAGGGGGA 59.280 45.455 0.00 0.00 42.39 4.81
3951 4206 2.993863 ACTATTTTGGAACAGGGGGAGT 59.006 45.455 0.00 0.00 42.39 3.85
3952 4207 4.018779 CACTATTTTGGAACAGGGGGAGTA 60.019 45.833 0.00 0.00 42.39 2.59
3953 4208 4.794067 ACTATTTTGGAACAGGGGGAGTAT 59.206 41.667 0.00 0.00 42.39 2.12
3954 4209 3.732048 TTTTGGAACAGGGGGAGTATC 57.268 47.619 0.00 0.00 42.39 2.24
3956 4211 2.661176 TGGAACAGGGGGAGTATCTT 57.339 50.000 0.00 0.00 33.73 2.40
3958 4213 3.265489 TGGAACAGGGGGAGTATCTTTT 58.735 45.455 0.00 0.00 33.73 2.27
3997 4256 3.244078 ACATGACGTTGTACACATGGACT 60.244 43.478 21.50 5.11 42.66 3.85
3998 4257 4.021807 ACATGACGTTGTACACATGGACTA 60.022 41.667 21.50 0.00 42.66 2.59
4174 4450 8.860088 AGAAATTTTATTGCACACTTTCTAGGT 58.140 29.630 0.00 0.00 31.63 3.08
4190 4466 9.093458 ACTTTCTAGGTTCATCATTTTTGGAAT 57.907 29.630 0.00 0.00 0.00 3.01
4227 4503 4.182693 TCTACGTGGTCTGTTGGTAATG 57.817 45.455 0.00 0.00 0.00 1.90
4420 4696 3.554324 CGTGGTCCGTCGATATCAATTTT 59.446 43.478 3.12 0.00 0.00 1.82
4523 4799 7.041372 GGATTGTAAGTTGTCTCTTGTTTGCTA 60.041 37.037 0.00 0.00 0.00 3.49
4534 4810 7.119699 TGTCTCTTGTTTGCTACCATGATTAAG 59.880 37.037 0.00 0.00 0.00 1.85
4581 4857 8.385111 CAATTGTTTTGGAGATGCAATATGTTC 58.615 33.333 0.00 0.00 0.00 3.18
4604 4880 8.852135 GTTCATAAGTAGTATCAGCCTACTCTT 58.148 37.037 0.95 5.10 43.26 2.85
4605 4881 8.998277 TCATAAGTAGTATCAGCCTACTCTTT 57.002 34.615 0.95 0.00 43.26 2.52
4606 4882 9.422681 TCATAAGTAGTATCAGCCTACTCTTTT 57.577 33.333 0.95 0.00 43.26 2.27
4607 4883 9.469807 CATAAGTAGTATCAGCCTACTCTTTTG 57.530 37.037 0.95 4.66 43.26 2.44
4608 4884 7.719871 AAGTAGTATCAGCCTACTCTTTTGA 57.280 36.000 0.95 0.00 43.26 2.69
4609 4885 7.719871 AGTAGTATCAGCCTACTCTTTTGAA 57.280 36.000 0.00 0.00 40.83 2.69
4667 4949 7.933215 TGTCTGAATGTCATTCTGATGAATT 57.067 32.000 27.77 0.00 45.03 2.17
4731 5013 4.681942 GTGGATGAAAGTAATCGATCTCCG 59.318 45.833 0.00 0.00 40.25 4.63
4746 5028 0.108186 CTCCGGTGAATACAGCTGCA 60.108 55.000 15.27 0.00 41.65 4.41
5000 5282 2.040178 GCCCATGCAGTAGTACTAGGT 58.960 52.381 1.87 0.00 37.47 3.08
5077 5360 8.691797 ACTACTTACTTGAAATTGAAAAAGGCA 58.308 29.630 0.00 0.00 0.00 4.75
5078 5361 9.696917 CTACTTACTTGAAATTGAAAAAGGCAT 57.303 29.630 0.00 0.00 0.00 4.40
5079 5362 8.369218 ACTTACTTGAAATTGAAAAAGGCATG 57.631 30.769 0.00 0.00 0.00 4.06
5080 5363 8.203485 ACTTACTTGAAATTGAAAAAGGCATGA 58.797 29.630 0.00 0.00 0.00 3.07
5081 5364 9.211485 CTTACTTGAAATTGAAAAAGGCATGAT 57.789 29.630 0.00 0.00 0.00 2.45
5082 5365 9.558396 TTACTTGAAATTGAAAAAGGCATGATT 57.442 25.926 0.00 0.00 0.00 2.57
5119 5402 5.528043 TGGCCGCAAATTATGTAAATGAT 57.472 34.783 0.00 0.00 0.00 2.45
5186 5469 7.094634 TGACATTCAGTTATTTTTCCTCAGCTC 60.095 37.037 0.00 0.00 0.00 4.09
5223 5507 9.638239 TGAAATGTTAGCAAACCAGAATATTTC 57.362 29.630 0.00 0.00 34.40 2.17
5228 5513 8.107095 TGTTAGCAAACCAGAATATTTCCTACT 58.893 33.333 0.00 0.00 34.49 2.57
5229 5514 8.613482 GTTAGCAAACCAGAATATTTCCTACTC 58.387 37.037 0.00 0.00 0.00 2.59
5230 5515 6.122964 AGCAAACCAGAATATTTCCTACTCC 58.877 40.000 0.00 0.00 0.00 3.85
5231 5516 5.299531 GCAAACCAGAATATTTCCTACTCCC 59.700 44.000 0.00 0.00 0.00 4.30
5232 5517 6.663734 CAAACCAGAATATTTCCTACTCCCT 58.336 40.000 0.00 0.00 0.00 4.20
5233 5518 6.502074 AACCAGAATATTTCCTACTCCCTC 57.498 41.667 0.00 0.00 0.00 4.30
5234 5519 4.908481 ACCAGAATATTTCCTACTCCCTCC 59.092 45.833 0.00 0.00 0.00 4.30
5235 5520 4.021016 CCAGAATATTTCCTACTCCCTCCG 60.021 50.000 0.00 0.00 0.00 4.63
5236 5521 4.589374 CAGAATATTTCCTACTCCCTCCGT 59.411 45.833 0.00 0.00 0.00 4.69
5237 5522 5.070580 CAGAATATTTCCTACTCCCTCCGTT 59.929 44.000 0.00 0.00 0.00 4.44
5238 5523 5.304871 AGAATATTTCCTACTCCCTCCGTTC 59.695 44.000 0.00 0.00 0.00 3.95
5239 5524 1.565067 TTTCCTACTCCCTCCGTTCC 58.435 55.000 0.00 0.00 0.00 3.62
5240 5525 0.708802 TTCCTACTCCCTCCGTTCCT 59.291 55.000 0.00 0.00 0.00 3.36
5241 5526 1.600058 TCCTACTCCCTCCGTTCCTA 58.400 55.000 0.00 0.00 0.00 2.94
5242 5527 1.925255 TCCTACTCCCTCCGTTCCTAA 59.075 52.381 0.00 0.00 0.00 2.69
5243 5528 2.312741 TCCTACTCCCTCCGTTCCTAAA 59.687 50.000 0.00 0.00 0.00 1.85
5244 5529 3.052338 TCCTACTCCCTCCGTTCCTAAAT 60.052 47.826 0.00 0.00 0.00 1.40
5245 5530 4.168675 TCCTACTCCCTCCGTTCCTAAATA 59.831 45.833 0.00 0.00 0.00 1.40
5246 5531 4.280425 CCTACTCCCTCCGTTCCTAAATAC 59.720 50.000 0.00 0.00 0.00 1.89
5247 5532 2.692041 ACTCCCTCCGTTCCTAAATACG 59.308 50.000 0.00 0.00 37.50 3.06
5271 5556 9.503399 ACGGAGTATTTGTCTTTTTAGAGATTT 57.497 29.630 0.00 0.00 41.94 2.17
5272 5557 9.974750 CGGAGTATTTGTCTTTTTAGAGATTTC 57.025 33.333 0.00 0.00 0.00 2.17
5280 5565 9.965824 TTGTCTTTTTAGAGATTTCAAATGGAC 57.034 29.630 0.00 0.00 0.00 4.02
5281 5566 9.354673 TGTCTTTTTAGAGATTTCAAATGGACT 57.645 29.630 0.00 0.00 0.00 3.85
5286 5571 9.567776 TTTTAGAGATTTCAAATGGACTACACA 57.432 29.630 0.00 0.00 0.00 3.72
5287 5572 9.739276 TTTAGAGATTTCAAATGGACTACACAT 57.261 29.630 0.00 0.00 0.00 3.21
5290 5575 9.334947 AGAGATTTCAAATGGACTACACATATG 57.665 33.333 0.00 0.00 0.00 1.78
5291 5576 8.455903 AGATTTCAAATGGACTACACATATGG 57.544 34.615 7.80 0.00 0.00 2.74
5292 5577 8.274322 AGATTTCAAATGGACTACACATATGGA 58.726 33.333 7.80 0.00 0.00 3.41
5293 5578 9.071276 GATTTCAAATGGACTACACATATGGAT 57.929 33.333 7.80 0.00 0.00 3.41
5294 5579 7.806409 TTCAAATGGACTACACATATGGATG 57.194 36.000 7.80 0.00 39.16 3.51
5296 5581 8.028652 TCAAATGGACTACACATATGGATGTA 57.971 34.615 7.80 6.82 44.82 2.29
5297 5582 8.659527 TCAAATGGACTACACATATGGATGTAT 58.340 33.333 7.80 0.00 44.82 2.29
5298 5583 9.942850 CAAATGGACTACACATATGGATGTATA 57.057 33.333 7.80 0.00 44.82 1.47
5334 5619 9.996554 TTTAAAGTGTAGATTCACTCATCTTGA 57.003 29.630 0.00 0.00 46.25 3.02
5335 5620 9.996554 TTAAAGTGTAGATTCACTCATCTTGAA 57.003 29.630 0.00 0.00 46.25 2.69
5336 5621 8.545229 AAAGTGTAGATTCACTCATCTTGAAG 57.455 34.615 0.00 0.00 46.25 3.02
5337 5622 7.238486 AGTGTAGATTCACTCATCTTGAAGT 57.762 36.000 0.00 0.00 44.07 3.01
5338 5623 7.319646 AGTGTAGATTCACTCATCTTGAAGTC 58.680 38.462 0.00 0.00 44.07 3.01
5339 5624 7.039434 AGTGTAGATTCACTCATCTTGAAGTCA 60.039 37.037 0.00 0.00 44.07 3.41
5340 5625 7.062839 GTGTAGATTCACTCATCTTGAAGTCAC 59.937 40.741 0.00 0.00 36.44 3.67
5341 5626 6.357579 AGATTCACTCATCTTGAAGTCACT 57.642 37.500 0.00 0.00 36.44 3.41
5342 5627 6.767456 AGATTCACTCATCTTGAAGTCACTT 58.233 36.000 0.00 0.00 36.44 3.16
5343 5628 7.901029 AGATTCACTCATCTTGAAGTCACTTA 58.099 34.615 0.00 0.00 36.44 2.24
5344 5629 8.538701 AGATTCACTCATCTTGAAGTCACTTAT 58.461 33.333 0.00 0.00 36.44 1.73
5345 5630 9.160496 GATTCACTCATCTTGAAGTCACTTATT 57.840 33.333 0.00 0.00 36.44 1.40
5346 5631 7.895975 TCACTCATCTTGAAGTCACTTATTG 57.104 36.000 0.00 0.00 0.00 1.90
5347 5632 7.670364 TCACTCATCTTGAAGTCACTTATTGA 58.330 34.615 0.00 0.00 0.00 2.57
5348 5633 8.150296 TCACTCATCTTGAAGTCACTTATTGAA 58.850 33.333 0.00 0.00 35.39 2.69
5349 5634 8.777413 CACTCATCTTGAAGTCACTTATTGAAA 58.223 33.333 0.00 0.00 35.39 2.69
5350 5635 9.512588 ACTCATCTTGAAGTCACTTATTGAAAT 57.487 29.630 0.00 0.00 35.39 2.17
5351 5636 9.985318 CTCATCTTGAAGTCACTTATTGAAATC 57.015 33.333 0.00 0.00 35.39 2.17
5352 5637 9.730705 TCATCTTGAAGTCACTTATTGAAATCT 57.269 29.630 0.00 0.00 35.39 2.40
5353 5638 9.985318 CATCTTGAAGTCACTTATTGAAATCTC 57.015 33.333 0.00 0.00 35.39 2.75
5354 5639 9.956640 ATCTTGAAGTCACTTATTGAAATCTCT 57.043 29.630 0.00 0.00 35.39 3.10
5381 5666 8.013378 AGAAAGACAAATATGTAAAAACGGACG 58.987 33.333 0.00 0.00 40.74 4.79
5382 5667 7.424227 AAGACAAATATGTAAAAACGGACGA 57.576 32.000 0.00 0.00 40.74 4.20
5383 5668 7.424227 AGACAAATATGTAAAAACGGACGAA 57.576 32.000 0.00 0.00 40.74 3.85
5384 5669 7.515643 AGACAAATATGTAAAAACGGACGAAG 58.484 34.615 0.00 0.00 40.74 3.79
5385 5670 7.172019 AGACAAATATGTAAAAACGGACGAAGT 59.828 33.333 0.00 0.00 42.79 3.01
5386 5671 8.309163 ACAAATATGTAAAAACGGACGAAGTA 57.691 30.769 0.00 0.00 38.78 2.24
5387 5672 8.223100 ACAAATATGTAAAAACGGACGAAGTAC 58.777 33.333 0.00 0.00 38.78 2.73
5444 5729 2.280119 GCTGATATCGGGCACGCA 60.280 61.111 1.67 0.00 40.69 5.24
5447 5732 0.792640 CTGATATCGGGCACGCATTC 59.207 55.000 1.67 0.00 40.69 2.67
5652 5940 6.742718 CGAAGCGATAGAATTCAACAACAAAT 59.257 34.615 8.44 0.00 34.24 2.32
5654 5942 7.144722 AGCGATAGAATTCAACAACAAATCA 57.855 32.000 8.44 0.00 39.76 2.57
5710 6000 8.555361 GCAATGACTTTAAAATGCAAAAGGTTA 58.445 29.630 12.08 0.29 37.09 2.85
5776 6066 5.972107 AAGTCAGCTTGATACTTTGCAAT 57.028 34.783 0.00 0.00 32.92 3.56
5779 6069 5.474532 AGTCAGCTTGATACTTTGCAATGAA 59.525 36.000 18.35 2.26 0.00 2.57
5786 6076 5.122519 TGATACTTTGCAATGAAGGCGATA 58.877 37.500 18.35 0.00 0.00 2.92
5915 6266 4.770287 CATGAAGAATTGCAGCTATCGAC 58.230 43.478 0.00 0.00 0.00 4.20
5921 6272 2.407521 TTGCAGCTATCGACGAGATC 57.592 50.000 3.01 0.00 40.66 2.75
5929 6280 2.097728 CGACGAGATCGCACGTGA 59.902 61.111 22.23 0.00 45.52 4.35
5930 6281 1.297672 CGACGAGATCGCACGTGAT 60.298 57.895 22.23 4.22 45.52 3.06
5931 6282 0.861866 CGACGAGATCGCACGTGATT 60.862 55.000 22.23 1.80 45.52 2.57
5932 6283 1.269166 GACGAGATCGCACGTGATTT 58.731 50.000 22.23 0.00 41.33 2.17
5933 6284 1.654105 GACGAGATCGCACGTGATTTT 59.346 47.619 22.23 0.00 41.33 1.82
5934 6285 2.066262 ACGAGATCGCACGTGATTTTT 58.934 42.857 22.23 0.21 44.43 1.94
5957 6308 4.930463 TTTTTGAAACGGAGGCAAAAAC 57.070 36.364 12.95 0.00 42.89 2.43
5958 6309 3.878160 TTTGAAACGGAGGCAAAAACT 57.122 38.095 0.00 0.00 0.00 2.66
5959 6310 3.878160 TTGAAACGGAGGCAAAAACTT 57.122 38.095 0.00 0.00 0.00 2.66
5960 6311 3.878160 TGAAACGGAGGCAAAAACTTT 57.122 38.095 0.00 0.00 0.00 2.66
5961 6312 3.516615 TGAAACGGAGGCAAAAACTTTG 58.483 40.909 0.00 0.00 0.00 2.77
5962 6313 1.934589 AACGGAGGCAAAAACTTTGC 58.065 45.000 14.30 14.30 44.22 3.68
5970 6321 3.110447 GCAAAAACTTTGCCTCATCCA 57.890 42.857 12.10 0.00 39.38 3.41
5971 6322 3.667360 GCAAAAACTTTGCCTCATCCAT 58.333 40.909 12.10 0.00 39.38 3.41
5972 6323 4.067192 GCAAAAACTTTGCCTCATCCATT 58.933 39.130 12.10 0.00 39.38 3.16
5973 6324 4.083696 GCAAAAACTTTGCCTCATCCATTG 60.084 41.667 12.10 0.00 39.38 2.82
5974 6325 5.299148 CAAAAACTTTGCCTCATCCATTGA 58.701 37.500 0.00 0.00 0.00 2.57
5975 6326 5.549742 AAAACTTTGCCTCATCCATTGAA 57.450 34.783 0.00 0.00 32.78 2.69
5976 6327 5.750352 AAACTTTGCCTCATCCATTGAAT 57.250 34.783 0.00 0.00 32.78 2.57
5977 6328 6.855763 AAACTTTGCCTCATCCATTGAATA 57.144 33.333 0.00 0.00 32.78 1.75
5978 6329 6.855763 AACTTTGCCTCATCCATTGAATAA 57.144 33.333 0.00 0.00 32.78 1.40
5979 6330 6.461110 ACTTTGCCTCATCCATTGAATAAG 57.539 37.500 0.00 0.00 32.78 1.73
5980 6331 6.189859 ACTTTGCCTCATCCATTGAATAAGA 58.810 36.000 0.00 0.00 32.78 2.10
5981 6332 6.320672 ACTTTGCCTCATCCATTGAATAAGAG 59.679 38.462 0.00 0.00 32.78 2.85
5982 6333 5.635278 TGCCTCATCCATTGAATAAGAGA 57.365 39.130 0.00 0.00 32.78 3.10
5983 6334 5.618236 TGCCTCATCCATTGAATAAGAGAG 58.382 41.667 0.00 0.00 32.78 3.20
5984 6335 5.367644 TGCCTCATCCATTGAATAAGAGAGA 59.632 40.000 0.00 0.00 32.78 3.10
5985 6336 6.126681 TGCCTCATCCATTGAATAAGAGAGAA 60.127 38.462 0.00 0.00 32.78 2.87
5986 6337 6.941436 GCCTCATCCATTGAATAAGAGAGAAT 59.059 38.462 0.00 0.00 32.78 2.40
5987 6338 8.099537 GCCTCATCCATTGAATAAGAGAGAATA 58.900 37.037 0.00 0.00 32.78 1.75
5988 6339 9.656040 CCTCATCCATTGAATAAGAGAGAATAG 57.344 37.037 0.00 0.00 32.78 1.73
6004 6355 9.249053 AGAGAGAATAGAGTTTGATACAAGTCA 57.751 33.333 0.00 0.00 0.00 3.41
6005 6356 9.296400 GAGAGAATAGAGTTTGATACAAGTCAC 57.704 37.037 0.00 0.00 0.00 3.67
6006 6357 9.030452 AGAGAATAGAGTTTGATACAAGTCACT 57.970 33.333 0.00 0.00 0.00 3.41
6007 6358 9.296400 GAGAATAGAGTTTGATACAAGTCACTC 57.704 37.037 0.00 0.00 0.00 3.51
6008 6359 8.807118 AGAATAGAGTTTGATACAAGTCACTCA 58.193 33.333 13.49 4.71 0.00 3.41
6009 6360 9.424319 GAATAGAGTTTGATACAAGTCACTCAA 57.576 33.333 13.49 0.00 0.00 3.02
6010 6361 9.950496 AATAGAGTTTGATACAAGTCACTCAAT 57.050 29.630 13.49 2.14 0.00 2.57
6012 6363 8.764524 AGAGTTTGATACAAGTCACTCAATAC 57.235 34.615 13.49 0.00 0.00 1.89
6013 6364 8.367911 AGAGTTTGATACAAGTCACTCAATACA 58.632 33.333 13.49 0.00 0.00 2.29
6014 6365 8.311650 AGTTTGATACAAGTCACTCAATACAC 57.688 34.615 0.00 0.00 0.00 2.90
6015 6366 6.944557 TTGATACAAGTCACTCAATACACG 57.055 37.500 0.00 0.00 0.00 4.49
6016 6367 5.407502 TGATACAAGTCACTCAATACACGG 58.592 41.667 0.00 0.00 0.00 4.94
6017 6368 2.413837 ACAAGTCACTCAATACACGGC 58.586 47.619 0.00 0.00 0.00 5.68
6018 6369 2.224185 ACAAGTCACTCAATACACGGCA 60.224 45.455 0.00 0.00 0.00 5.69
6019 6370 3.002791 CAAGTCACTCAATACACGGCAT 58.997 45.455 0.00 0.00 0.00 4.40
6020 6371 2.621338 AGTCACTCAATACACGGCATG 58.379 47.619 0.00 0.00 0.00 4.06
6021 6372 2.233676 AGTCACTCAATACACGGCATGA 59.766 45.455 0.00 0.00 0.00 3.07
6022 6373 2.348666 GTCACTCAATACACGGCATGAC 59.651 50.000 0.00 0.00 0.00 3.06
6023 6374 2.028567 TCACTCAATACACGGCATGACA 60.029 45.455 0.00 0.00 0.00 3.58
6024 6375 2.938451 CACTCAATACACGGCATGACAT 59.062 45.455 0.00 0.00 0.00 3.06
6025 6376 3.001634 CACTCAATACACGGCATGACATC 59.998 47.826 0.00 0.00 0.00 3.06
6026 6377 3.197265 CTCAATACACGGCATGACATCA 58.803 45.455 0.00 0.00 0.00 3.07
6027 6378 3.807553 TCAATACACGGCATGACATCAT 58.192 40.909 0.00 0.00 36.96 2.45
6028 6379 4.198530 TCAATACACGGCATGACATCATT 58.801 39.130 0.00 0.00 33.61 2.57
6029 6380 4.273235 TCAATACACGGCATGACATCATTC 59.727 41.667 0.00 0.00 33.61 2.67
6030 6381 2.408271 ACACGGCATGACATCATTCT 57.592 45.000 0.00 0.00 33.61 2.40
6031 6382 2.283298 ACACGGCATGACATCATTCTC 58.717 47.619 0.00 0.00 33.61 2.87
6032 6383 1.259770 CACGGCATGACATCATTCTCG 59.740 52.381 0.00 0.04 33.61 4.04
6033 6384 0.234106 CGGCATGACATCATTCTCGC 59.766 55.000 0.00 0.00 33.61 5.03
6034 6385 0.234106 GGCATGACATCATTCTCGCG 59.766 55.000 0.00 0.00 33.61 5.87
6035 6386 1.211743 GCATGACATCATTCTCGCGA 58.788 50.000 9.26 9.26 33.61 5.87
6036 6387 1.594397 GCATGACATCATTCTCGCGAA 59.406 47.619 11.33 0.00 33.61 4.70
6037 6388 2.030823 GCATGACATCATTCTCGCGAAA 59.969 45.455 11.33 8.23 33.61 3.46
6038 6389 3.303593 GCATGACATCATTCTCGCGAAAT 60.304 43.478 11.33 10.29 33.61 2.17
6039 6390 4.084380 GCATGACATCATTCTCGCGAAATA 60.084 41.667 11.33 0.00 33.61 1.40
6040 6391 5.558844 GCATGACATCATTCTCGCGAAATAA 60.559 40.000 11.33 5.40 33.61 1.40
6041 6392 6.596703 CATGACATCATTCTCGCGAAATAAT 58.403 36.000 11.33 7.72 33.61 1.28
6042 6393 5.977731 TGACATCATTCTCGCGAAATAATG 58.022 37.500 22.74 22.74 31.91 1.90
6043 6394 5.050159 TGACATCATTCTCGCGAAATAATGG 60.050 40.000 25.70 17.98 31.91 3.16
6044 6395 5.056480 ACATCATTCTCGCGAAATAATGGA 58.944 37.500 25.70 17.69 31.91 3.41
6045 6396 5.050091 ACATCATTCTCGCGAAATAATGGAC 60.050 40.000 25.70 0.00 31.91 4.02
6046 6397 4.693283 TCATTCTCGCGAAATAATGGACT 58.307 39.130 25.70 7.27 31.91 3.85
6047 6398 4.745125 TCATTCTCGCGAAATAATGGACTC 59.255 41.667 25.70 0.00 31.91 3.36
6048 6399 4.386867 TTCTCGCGAAATAATGGACTCT 57.613 40.909 11.33 0.00 0.00 3.24
6049 6400 5.509716 TTCTCGCGAAATAATGGACTCTA 57.490 39.130 11.33 0.00 0.00 2.43
6050 6401 5.509716 TCTCGCGAAATAATGGACTCTAA 57.490 39.130 11.33 0.00 0.00 2.10
6051 6402 6.085555 TCTCGCGAAATAATGGACTCTAAT 57.914 37.500 11.33 0.00 0.00 1.73
6052 6403 6.513180 TCTCGCGAAATAATGGACTCTAATT 58.487 36.000 11.33 0.00 0.00 1.40
6053 6404 6.984474 TCTCGCGAAATAATGGACTCTAATTT 59.016 34.615 11.33 0.00 0.00 1.82
6054 6405 7.494625 TCTCGCGAAATAATGGACTCTAATTTT 59.505 33.333 11.33 0.00 0.00 1.82
6055 6406 7.981142 TCGCGAAATAATGGACTCTAATTTTT 58.019 30.769 6.20 0.00 0.00 1.94
6076 6427 2.359354 CACCGCCGATGACCCAAA 60.359 61.111 0.00 0.00 0.00 3.28
6077 6428 2.046314 ACCGCCGATGACCCAAAG 60.046 61.111 0.00 0.00 0.00 2.77
6078 6429 2.824041 CCGCCGATGACCCAAAGG 60.824 66.667 0.00 0.00 40.04 3.11
6089 6440 2.115266 CCAAAGGTTGGCCTCGGT 59.885 61.111 3.32 0.00 46.33 4.69
6090 6441 1.971695 CCAAAGGTTGGCCTCGGTC 60.972 63.158 3.32 0.00 46.33 4.79
6091 6442 1.073199 CAAAGGTTGGCCTCGGTCT 59.927 57.895 3.32 0.00 46.33 3.85
6092 6443 0.955919 CAAAGGTTGGCCTCGGTCTC 60.956 60.000 3.32 0.00 46.33 3.36
6093 6444 1.128188 AAAGGTTGGCCTCGGTCTCT 61.128 55.000 3.32 0.00 46.33 3.10
6094 6445 0.252103 AAGGTTGGCCTCGGTCTCTA 60.252 55.000 3.32 0.00 46.33 2.43
6095 6446 0.032017 AGGTTGGCCTCGGTCTCTAT 60.032 55.000 3.32 0.00 42.67 1.98
6096 6447 1.217183 AGGTTGGCCTCGGTCTCTATA 59.783 52.381 3.32 0.00 42.67 1.31
6097 6448 2.037144 GGTTGGCCTCGGTCTCTATAA 58.963 52.381 3.32 0.00 0.00 0.98
6098 6449 2.433239 GGTTGGCCTCGGTCTCTATAAA 59.567 50.000 3.32 0.00 0.00 1.40
6099 6450 3.492829 GGTTGGCCTCGGTCTCTATAAAG 60.493 52.174 3.32 0.00 0.00 1.85
6100 6451 2.317040 TGGCCTCGGTCTCTATAAAGG 58.683 52.381 3.32 0.00 0.00 3.11
6101 6452 1.001068 GGCCTCGGTCTCTATAAAGGC 59.999 57.143 0.00 2.60 46.77 4.35
6102 6453 1.687123 GCCTCGGTCTCTATAAAGGCA 59.313 52.381 6.33 0.00 46.72 4.75
6103 6454 2.102588 GCCTCGGTCTCTATAAAGGCAA 59.897 50.000 6.33 0.00 46.72 4.52
6104 6455 3.800604 GCCTCGGTCTCTATAAAGGCAAG 60.801 52.174 6.33 0.00 46.72 4.01
6105 6456 3.385577 CTCGGTCTCTATAAAGGCAAGC 58.614 50.000 0.00 0.00 0.00 4.01
6106 6457 2.764010 TCGGTCTCTATAAAGGCAAGCA 59.236 45.455 0.00 0.00 0.00 3.91
6107 6458 3.196901 TCGGTCTCTATAAAGGCAAGCAA 59.803 43.478 0.00 0.00 0.00 3.91
6108 6459 3.938963 CGGTCTCTATAAAGGCAAGCAAA 59.061 43.478 0.00 0.00 0.00 3.68
6109 6460 4.394920 CGGTCTCTATAAAGGCAAGCAAAA 59.605 41.667 0.00 0.00 0.00 2.44
6110 6461 5.066505 CGGTCTCTATAAAGGCAAGCAAAAT 59.933 40.000 0.00 0.00 0.00 1.82
6111 6462 6.260050 CGGTCTCTATAAAGGCAAGCAAAATA 59.740 38.462 0.00 0.00 0.00 1.40
6112 6463 7.519008 CGGTCTCTATAAAGGCAAGCAAAATAG 60.519 40.741 0.00 0.00 0.00 1.73
6113 6464 7.283354 GGTCTCTATAAAGGCAAGCAAAATAGT 59.717 37.037 0.00 0.00 0.00 2.12
6114 6465 8.678199 GTCTCTATAAAGGCAAGCAAAATAGTT 58.322 33.333 0.00 0.00 0.00 2.24
6115 6466 8.677300 TCTCTATAAAGGCAAGCAAAATAGTTG 58.323 33.333 0.00 0.00 0.00 3.16
6116 6467 7.771183 TCTATAAAGGCAAGCAAAATAGTTGG 58.229 34.615 0.00 0.00 0.00 3.77
6117 6468 4.953940 AAAGGCAAGCAAAATAGTTGGA 57.046 36.364 0.00 0.00 0.00 3.53
6118 6469 4.525912 AAGGCAAGCAAAATAGTTGGAG 57.474 40.909 0.00 0.00 0.00 3.86
6119 6470 2.827921 AGGCAAGCAAAATAGTTGGAGG 59.172 45.455 0.00 0.00 0.00 4.30
6120 6471 2.825532 GGCAAGCAAAATAGTTGGAGGA 59.174 45.455 0.00 0.00 0.00 3.71
6121 6472 3.119352 GGCAAGCAAAATAGTTGGAGGAG 60.119 47.826 0.00 0.00 0.00 3.69
6122 6473 3.674410 GCAAGCAAAATAGTTGGAGGAGC 60.674 47.826 0.00 0.00 0.00 4.70
6123 6474 3.439857 AGCAAAATAGTTGGAGGAGCA 57.560 42.857 0.00 0.00 0.00 4.26
6124 6475 3.084786 AGCAAAATAGTTGGAGGAGCAC 58.915 45.455 0.00 0.00 0.00 4.40
6125 6476 3.084786 GCAAAATAGTTGGAGGAGCACT 58.915 45.455 0.00 0.00 0.00 4.40
6126 6477 3.127721 GCAAAATAGTTGGAGGAGCACTC 59.872 47.826 0.16 0.16 45.84 3.51
6127 6478 4.583871 CAAAATAGTTGGAGGAGCACTCT 58.416 43.478 8.14 0.00 45.83 3.24
6128 6479 4.917906 AAATAGTTGGAGGAGCACTCTT 57.082 40.909 8.14 0.00 45.83 2.85
6129 6480 3.902881 ATAGTTGGAGGAGCACTCTTG 57.097 47.619 8.14 0.00 45.83 3.02
6130 6481 1.428869 AGTTGGAGGAGCACTCTTGT 58.571 50.000 8.14 0.00 45.83 3.16
6131 6482 1.071385 AGTTGGAGGAGCACTCTTGTG 59.929 52.381 8.14 0.00 45.83 3.33
6142 6493 1.876156 CACTCTTGTGCTTGAAGACCC 59.124 52.381 0.00 0.00 37.38 4.46
6143 6494 1.771255 ACTCTTGTGCTTGAAGACCCT 59.229 47.619 0.00 0.00 0.00 4.34
6144 6495 2.173569 ACTCTTGTGCTTGAAGACCCTT 59.826 45.455 0.00 0.00 0.00 3.95
6145 6496 2.551459 CTCTTGTGCTTGAAGACCCTTG 59.449 50.000 0.00 0.00 0.00 3.61
6146 6497 1.000938 CTTGTGCTTGAAGACCCTTGC 60.001 52.381 0.00 0.00 0.00 4.01
6147 6498 1.165907 TGTGCTTGAAGACCCTTGCG 61.166 55.000 0.00 0.00 0.00 4.85
6148 6499 1.148273 TGCTTGAAGACCCTTGCGT 59.852 52.632 0.00 0.00 0.00 5.24
6149 6500 0.465460 TGCTTGAAGACCCTTGCGTT 60.465 50.000 0.00 0.00 0.00 4.84
6150 6501 0.668535 GCTTGAAGACCCTTGCGTTT 59.331 50.000 0.00 0.00 0.00 3.60
6151 6502 1.335051 GCTTGAAGACCCTTGCGTTTC 60.335 52.381 0.00 0.00 0.00 2.78
6152 6503 0.941542 TTGAAGACCCTTGCGTTTCG 59.058 50.000 0.00 0.00 0.00 3.46
6163 6514 4.238385 CGTTTCGCTCGTTCCAGA 57.762 55.556 0.00 0.00 0.00 3.86
6164 6515 1.773496 CGTTTCGCTCGTTCCAGAC 59.227 57.895 0.00 0.00 0.00 3.51
6165 6516 0.937699 CGTTTCGCTCGTTCCAGACA 60.938 55.000 0.00 0.00 0.00 3.41
6166 6517 0.784778 GTTTCGCTCGTTCCAGACAG 59.215 55.000 0.00 0.00 0.00 3.51
6167 6518 0.387929 TTTCGCTCGTTCCAGACAGT 59.612 50.000 0.00 0.00 0.00 3.55
6168 6519 0.039437 TTCGCTCGTTCCAGACAGTC 60.039 55.000 0.00 0.00 0.00 3.51
6169 6520 1.444553 CGCTCGTTCCAGACAGTCC 60.445 63.158 0.00 0.00 0.00 3.85
6170 6521 1.666011 GCTCGTTCCAGACAGTCCA 59.334 57.895 0.00 0.00 0.00 4.02
6171 6522 0.667792 GCTCGTTCCAGACAGTCCAC 60.668 60.000 0.00 0.00 0.00 4.02
6172 6523 0.387367 CTCGTTCCAGACAGTCCACG 60.387 60.000 0.00 1.60 0.00 4.94
6173 6524 0.820482 TCGTTCCAGACAGTCCACGA 60.820 55.000 9.65 9.65 34.45 4.35
6174 6525 0.031585 CGTTCCAGACAGTCCACGAA 59.968 55.000 0.00 0.00 0.00 3.85
6175 6526 1.537348 CGTTCCAGACAGTCCACGAAA 60.537 52.381 0.00 0.00 0.00 3.46
6176 6527 1.865340 GTTCCAGACAGTCCACGAAAC 59.135 52.381 0.00 0.00 0.00 2.78
6177 6528 1.116308 TCCAGACAGTCCACGAAACA 58.884 50.000 0.00 0.00 0.00 2.83
6178 6529 1.483004 TCCAGACAGTCCACGAAACAA 59.517 47.619 0.00 0.00 0.00 2.83
6179 6530 1.867233 CCAGACAGTCCACGAAACAAG 59.133 52.381 0.00 0.00 0.00 3.16
6180 6531 1.261619 CAGACAGTCCACGAAACAAGC 59.738 52.381 0.00 0.00 0.00 4.01
6181 6532 1.134521 AGACAGTCCACGAAACAAGCA 60.135 47.619 0.00 0.00 0.00 3.91
6182 6533 1.873591 GACAGTCCACGAAACAAGCAT 59.126 47.619 0.00 0.00 0.00 3.79
6183 6534 1.603802 ACAGTCCACGAAACAAGCATG 59.396 47.619 0.00 0.00 0.00 4.06
6184 6535 1.069022 CAGTCCACGAAACAAGCATGG 60.069 52.381 0.00 0.00 0.00 3.66
6185 6536 0.951558 GTCCACGAAACAAGCATGGT 59.048 50.000 0.00 0.00 0.00 3.55
6186 6537 0.950836 TCCACGAAACAAGCATGGTG 59.049 50.000 0.00 0.00 0.00 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 8.335532 TCTTTGATTTAGTTTACACATGGGAG 57.664 34.615 0.00 0.00 0.00 4.30
8 9 9.180678 GTGGTTCTTTGATTTAGTTTACACATG 57.819 33.333 0.00 0.00 0.00 3.21
32 33 2.557056 TGTCTCTACTCTTTCGGTGGTG 59.443 50.000 0.00 0.00 0.00 4.17
35 36 6.438259 TTCTATGTCTCTACTCTTTCGGTG 57.562 41.667 0.00 0.00 0.00 4.94
37 38 8.191446 TGAATTTCTATGTCTCTACTCTTTCGG 58.809 37.037 0.00 0.00 0.00 4.30
50 51 6.803807 GGTTGAAGCAGTTGAATTTCTATGTC 59.196 38.462 0.00 0.00 0.00 3.06
54 55 5.179368 CGAGGTTGAAGCAGTTGAATTTCTA 59.821 40.000 0.00 0.00 0.00 2.10
61 62 0.884704 GGCGAGGTTGAAGCAGTTGA 60.885 55.000 0.00 0.00 0.00 3.18
198 215 9.455847 GGAAAGACAATATAGATGCAAATGTTC 57.544 33.333 0.00 0.00 0.00 3.18
239 257 3.740115 TCCAGGAACAAGCAAACTAGTC 58.260 45.455 0.00 0.00 0.00 2.59
320 339 3.544684 ACAGAACAGATGAGCAACACAA 58.455 40.909 0.00 0.00 0.00 3.33
322 341 5.673337 TTAACAGAACAGATGAGCAACAC 57.327 39.130 0.00 0.00 0.00 3.32
339 358 7.371159 CAGCGATATCTCCAGTCTAATTAACA 58.629 38.462 0.34 0.00 0.00 2.41
343 362 4.322349 GGCAGCGATATCTCCAGTCTAATT 60.322 45.833 0.34 0.00 0.00 1.40
344 363 3.194542 GGCAGCGATATCTCCAGTCTAAT 59.805 47.826 0.34 0.00 0.00 1.73
346 365 2.163509 GGCAGCGATATCTCCAGTCTA 58.836 52.381 0.34 0.00 0.00 2.59
347 366 0.965439 GGCAGCGATATCTCCAGTCT 59.035 55.000 0.34 0.00 0.00 3.24
348 367 0.965439 AGGCAGCGATATCTCCAGTC 59.035 55.000 0.34 0.00 0.00 3.51
349 368 1.418334 AAGGCAGCGATATCTCCAGT 58.582 50.000 0.34 0.00 0.00 4.00
350 369 2.141517 CAAAGGCAGCGATATCTCCAG 58.858 52.381 0.34 0.00 0.00 3.86
351 370 1.202687 CCAAAGGCAGCGATATCTCCA 60.203 52.381 0.34 0.00 0.00 3.86
354 373 1.202698 GGTCCAAAGGCAGCGATATCT 60.203 52.381 0.34 0.00 0.00 1.98
418 440 6.823689 CCTCTCCCTTCGATTTTCATTAAGAA 59.176 38.462 0.00 0.00 0.00 2.52
421 443 4.881850 GCCTCTCCCTTCGATTTTCATTAA 59.118 41.667 0.00 0.00 0.00 1.40
433 455 2.889170 AAAGAAAGGCCTCTCCCTTC 57.111 50.000 5.23 5.76 44.28 3.46
434 456 4.741928 TTAAAAGAAAGGCCTCTCCCTT 57.258 40.909 5.23 4.31 46.97 3.95
506 542 9.529823 AACAATTGATCATAGGATAGCATTCAT 57.470 29.630 13.59 0.00 32.67 2.57
507 543 8.929260 AACAATTGATCATAGGATAGCATTCA 57.071 30.769 13.59 0.00 32.67 2.57
532 568 3.603158 TGAATTGCTAGTGCGGAGTAA 57.397 42.857 0.00 0.00 43.34 2.24
536 572 1.468520 GCTTTGAATTGCTAGTGCGGA 59.531 47.619 0.00 0.00 43.34 5.54
545 581 1.537202 ACGGTCTCTGCTTTGAATTGC 59.463 47.619 0.00 0.00 0.00 3.56
552 588 4.537135 TTTCATCTACGGTCTCTGCTTT 57.463 40.909 0.00 0.00 0.00 3.51
558 594 4.865365 CCTCTTGTTTTCATCTACGGTCTC 59.135 45.833 0.00 0.00 0.00 3.36
560 596 4.389077 CACCTCTTGTTTTCATCTACGGTC 59.611 45.833 0.00 0.00 0.00 4.79
586 622 7.115663 GCTTTATTTCGCTACTAGGAAGATCAG 59.884 40.741 0.00 0.00 0.00 2.90
594 630 3.982058 CGGAGCTTTATTTCGCTACTAGG 59.018 47.826 0.00 0.00 34.91 3.02
619 655 3.565482 TGCAGGAGAAGATTTTGACACAC 59.435 43.478 0.00 0.00 0.00 3.82
624 660 8.585471 AAGATAATTGCAGGAGAAGATTTTGA 57.415 30.769 0.00 0.00 0.00 2.69
661 701 9.757227 TTGTTATTTAACTGGTTTCCTGAATTG 57.243 29.630 2.45 0.00 37.12 2.32
685 728 4.567971 GCTGGATGTCTCCTCTCATATTG 58.432 47.826 0.00 0.00 42.59 1.90
698 741 1.524621 CATGGTCCCGCTGGATGTC 60.525 63.158 0.00 0.00 44.28 3.06
753 803 1.736126 CACTGGATGAGTGTGATGTGC 59.264 52.381 0.00 0.00 46.30 4.57
791 842 2.630580 GGTTACAAGAAATGGGCCACAA 59.369 45.455 9.28 0.00 0.00 3.33
888 941 0.928451 GTCGCCGCAAGTTTTGTGAC 60.928 55.000 4.07 0.00 43.66 3.67
1301 1389 3.636231 CCTGTGCTGGACCCGGAA 61.636 66.667 0.73 0.00 0.00 4.30
1314 1402 1.705873 GGATATCTGACCGACCCTGT 58.294 55.000 2.05 0.00 0.00 4.00
1338 1432 0.243636 CATTCGACCAAGGGGCAAAC 59.756 55.000 0.00 0.00 37.90 2.93
1339 1433 1.531739 GCATTCGACCAAGGGGCAAA 61.532 55.000 0.00 0.00 37.90 3.68
1357 1451 1.379299 CGATCAAATCAATCGCACGC 58.621 50.000 0.00 0.00 39.50 5.34
1560 1659 0.179000 CAGGGATAAAGAGGCAGCGT 59.821 55.000 0.00 0.00 0.00 5.07
1566 1665 6.418101 TCAATGAGAAACAGGGATAAAGAGG 58.582 40.000 0.00 0.00 0.00 3.69
1567 1666 8.517062 AATCAATGAGAAACAGGGATAAAGAG 57.483 34.615 0.00 0.00 0.00 2.85
1568 1667 8.742777 CAAATCAATGAGAAACAGGGATAAAGA 58.257 33.333 0.00 0.00 0.00 2.52
1569 1668 8.526147 ACAAATCAATGAGAAACAGGGATAAAG 58.474 33.333 0.00 0.00 0.00 1.85
1570 1669 8.421249 ACAAATCAATGAGAAACAGGGATAAA 57.579 30.769 0.00 0.00 0.00 1.40
1571 1670 9.699410 ATACAAATCAATGAGAAACAGGGATAA 57.301 29.630 0.00 0.00 0.00 1.75
1572 1671 9.699410 AATACAAATCAATGAGAAACAGGGATA 57.301 29.630 0.00 0.00 0.00 2.59
1573 1672 8.599624 AATACAAATCAATGAGAAACAGGGAT 57.400 30.769 0.00 0.00 0.00 3.85
1574 1673 7.669304 TGAATACAAATCAATGAGAAACAGGGA 59.331 33.333 0.00 0.00 0.00 4.20
1630 1729 1.478105 CCCAAGAGCAATAGCCAAACC 59.522 52.381 0.00 0.00 43.56 3.27
1643 1742 1.484240 CTCTAGGCTGAACCCCAAGAG 59.516 57.143 0.00 0.00 40.58 2.85
1648 1747 4.468153 CCTAATATCTCTAGGCTGAACCCC 59.532 50.000 0.00 0.00 40.58 4.95
1667 1766 8.478775 TCTTAATGTGCTTCTATCTAGCCTAA 57.521 34.615 0.00 0.00 37.85 2.69
1731 1834 3.555956 CGACTAAACCCCTGAATTGATCG 59.444 47.826 0.00 0.00 0.00 3.69
1735 1838 4.069304 TGTTCGACTAAACCCCTGAATTG 58.931 43.478 0.00 0.00 0.00 2.32
1754 1857 4.693566 TCGAGCGAAATGTTAATCCTTGTT 59.306 37.500 0.00 0.00 0.00 2.83
1780 1883 4.643784 ACTACCAAGGATTACGAGTCGATT 59.356 41.667 21.50 0.00 0.00 3.34
1794 1897 2.267961 GGTGGCCGACTACCAAGG 59.732 66.667 0.00 0.00 39.39 3.61
1795 1898 3.065306 TGGTGGCCGACTACCAAG 58.935 61.111 4.02 0.00 43.60 3.61
1825 1928 7.068593 TGTCTGTCACCATCTTTGAGAATTTTT 59.931 33.333 0.00 0.00 0.00 1.94
1881 1984 4.536090 AGATACAGTTCCAATTCACCAGGA 59.464 41.667 0.00 0.00 0.00 3.86
1884 1987 5.241403 ACAGATACAGTTCCAATTCACCA 57.759 39.130 0.00 0.00 0.00 4.17
1927 2030 3.637432 TGCAAAGCCTTAATTTCACACG 58.363 40.909 0.00 0.00 0.00 4.49
1953 2056 6.403049 TCTTGCGACCATTATGAGTTCTAAA 58.597 36.000 0.00 0.00 0.00 1.85
2001 2104 3.588842 CCCATAGGCCCTATGAGATTTGA 59.411 47.826 28.69 0.00 44.55 2.69
2002 2105 3.331889 ACCCATAGGCCCTATGAGATTTG 59.668 47.826 28.69 12.69 44.55 2.32
2003 2106 3.613559 ACCCATAGGCCCTATGAGATTT 58.386 45.455 28.69 7.78 44.55 2.17
2007 2111 2.057922 ACAACCCATAGGCCCTATGAG 58.942 52.381 28.69 20.02 44.55 2.90
2045 2149 0.933097 CCATCCTGCATTCGAGAACG 59.067 55.000 0.00 0.00 41.26 3.95
2066 2228 4.519350 TGTCACACTAAGATATCTAGGCGG 59.481 45.833 5.46 0.00 0.00 6.13
2068 2230 7.045126 AGTTGTCACACTAAGATATCTAGGC 57.955 40.000 5.46 0.00 0.00 3.93
2201 2363 2.223618 GCCCTATCTCGATTCCGCTATC 60.224 54.545 0.00 0.00 35.37 2.08
2212 2374 3.562973 TCTTAACTGTACGCCCTATCTCG 59.437 47.826 0.00 0.00 0.00 4.04
2407 2569 4.978083 GGCATCTGAAAAGATGTCACAT 57.022 40.909 13.91 0.00 46.74 3.21
2411 2573 4.889832 AATCGGCATCTGAAAAGATGTC 57.110 40.909 15.19 12.58 45.39 3.06
2412 2574 6.769822 AGATAAATCGGCATCTGAAAAGATGT 59.230 34.615 15.19 0.10 45.39 3.06
2413 2575 7.199541 AGATAAATCGGCATCTGAAAAGATG 57.800 36.000 10.67 10.67 46.13 2.90
2426 2588 2.221981 GCACTACTGCAGATAAATCGGC 59.778 50.000 23.35 8.78 46.11 5.54
2427 2589 3.722147 AGCACTACTGCAGATAAATCGG 58.278 45.455 23.35 2.34 46.97 4.18
2443 2605 6.655848 TCCGTACAAAAACCATAAATAGCACT 59.344 34.615 0.00 0.00 0.00 4.40
2452 2614 4.328536 ACTGCATCCGTACAAAAACCATA 58.671 39.130 0.00 0.00 0.00 2.74
2453 2615 3.153919 ACTGCATCCGTACAAAAACCAT 58.846 40.909 0.00 0.00 0.00 3.55
2480 2642 7.987458 ACGAGCTAATATTTTCATTTCAGGAGA 59.013 33.333 0.00 0.00 0.00 3.71
2484 2646 8.066595 CAGGACGAGCTAATATTTTCATTTCAG 58.933 37.037 0.00 0.00 0.00 3.02
2485 2647 7.552687 ACAGGACGAGCTAATATTTTCATTTCA 59.447 33.333 0.00 0.00 0.00 2.69
2555 2772 3.947910 AACTGTGGCTCCATCAATTTG 57.052 42.857 0.00 0.00 0.00 2.32
2558 2775 3.719268 TGTAACTGTGGCTCCATCAAT 57.281 42.857 0.00 0.00 0.00 2.57
2618 2835 9.932207 ACATCAATGAATTTTCAAGCATAAGAA 57.068 25.926 0.00 0.00 41.13 2.52
2834 3055 9.744468 ATGTTTATTTGGTTCAAGTGACTTTAC 57.256 29.630 0.00 0.00 0.00 2.01
2915 3148 5.009911 TGGTTCAATTTCATTCAGGTGAGTG 59.990 40.000 0.00 0.00 33.67 3.51
3066 3302 9.353999 CAGGATAAACTAATTAAACAAGGCAAC 57.646 33.333 0.00 0.00 0.00 4.17
3301 3542 9.486497 CTAGTCACATAATAGCATTCACTCAAT 57.514 33.333 0.00 0.00 0.00 2.57
3483 3736 6.463995 ACAGAAATTTTACACAAAGCCTCA 57.536 33.333 0.00 0.00 0.00 3.86
3488 3741 8.977505 CAATGGGTACAGAAATTTTACACAAAG 58.022 33.333 7.38 1.30 32.96 2.77
3492 3746 7.882179 ACTCAATGGGTACAGAAATTTTACAC 58.118 34.615 0.00 0.00 0.00 2.90
3493 3747 8.356657 CAACTCAATGGGTACAGAAATTTTACA 58.643 33.333 0.00 0.00 0.00 2.41
3498 3752 7.174946 CAGTACAACTCAATGGGTACAGAAATT 59.825 37.037 0.00 0.00 38.78 1.82
3646 3900 1.492176 CAGAGGGGCACATATCAGGTT 59.508 52.381 0.00 0.00 0.00 3.50
3661 3915 3.550437 ACTTCCGATTTCCATCAGAGG 57.450 47.619 0.00 0.00 0.00 3.69
3813 4067 4.766891 ACACACTATGTTTTGGAATGGAGG 59.233 41.667 0.00 0.00 38.98 4.30
3887 4141 9.952030 TTGGTATTACTGATGTTGATAGTTTCA 57.048 29.630 0.00 0.00 0.00 2.69
3919 4173 7.442969 CCTGTTCCAAAATAGTGTTACAGTGTA 59.557 37.037 2.52 0.00 31.28 2.90
3997 4256 7.481483 CGATCGAAATTGCATCTTCAAAACTTA 59.519 33.333 10.26 0.00 0.00 2.24
3998 4257 6.306356 CGATCGAAATTGCATCTTCAAAACTT 59.694 34.615 10.26 0.00 0.00 2.66
4064 4340 7.923888 ACATCATTAGATTTGTCCTGAAATCG 58.076 34.615 0.00 0.00 44.03 3.34
4174 4450 6.022315 ACTACCCCATTCCAAAAATGATGAA 58.978 36.000 0.00 0.00 0.00 2.57
4190 4466 5.713389 CCACGTAGATGATATAACTACCCCA 59.287 44.000 0.00 0.00 34.76 4.96
4420 4696 1.621317 TGGTAAGTCTTCGCATGGTCA 59.379 47.619 0.00 0.00 0.00 4.02
4523 4799 7.201848 CCTGCATTGTTGTATCTTAATCATGGT 60.202 37.037 0.00 0.00 0.00 3.55
4572 4848 9.935241 AGGCTGATACTACTTATGAACATATTG 57.065 33.333 0.00 0.00 0.00 1.90
4746 5028 0.610687 GTGTAGGAGGAGCAACAGCT 59.389 55.000 0.00 0.00 42.41 4.24
4875 5157 1.805945 CTGTGCGCCGAGGTTAGAC 60.806 63.158 4.18 0.00 0.00 2.59
5000 5282 1.737838 CATCAACAGCTTAAGCCGGA 58.262 50.000 23.71 15.60 43.38 5.14
5073 5356 5.072741 AGAACACTGTACAAAATCATGCCT 58.927 37.500 0.00 0.00 0.00 4.75
5075 5358 5.630680 CCAAGAACACTGTACAAAATCATGC 59.369 40.000 0.00 0.00 0.00 4.06
5076 5359 5.630680 GCCAAGAACACTGTACAAAATCATG 59.369 40.000 0.00 0.00 0.00 3.07
5077 5360 5.278957 GGCCAAGAACACTGTACAAAATCAT 60.279 40.000 0.00 0.00 0.00 2.45
5078 5361 4.037446 GGCCAAGAACACTGTACAAAATCA 59.963 41.667 0.00 0.00 0.00 2.57
5079 5362 4.546570 GGCCAAGAACACTGTACAAAATC 58.453 43.478 0.00 0.00 0.00 2.17
5080 5363 3.004315 CGGCCAAGAACACTGTACAAAAT 59.996 43.478 2.24 0.00 0.00 1.82
5081 5364 2.356382 CGGCCAAGAACACTGTACAAAA 59.644 45.455 2.24 0.00 0.00 2.44
5082 5365 1.944024 CGGCCAAGAACACTGTACAAA 59.056 47.619 2.24 0.00 0.00 2.83
5186 5469 4.082625 TGCTAACATTTCATGGAAGCACAG 60.083 41.667 9.83 0.00 42.97 3.66
5193 5477 5.076182 TCTGGTTTGCTAACATTTCATGGA 58.924 37.500 13.00 0.00 35.92 3.41
5195 5479 9.590451 AATATTCTGGTTTGCTAACATTTCATG 57.410 29.630 13.00 0.00 35.92 3.07
5223 5507 2.449137 TTAGGAACGGAGGGAGTAGG 57.551 55.000 0.00 0.00 0.00 3.18
5234 5519 6.976925 AGACAAATACTCCGTATTTAGGAACG 59.023 38.462 10.60 0.00 43.92 3.95
5235 5520 8.713737 AAGACAAATACTCCGTATTTAGGAAC 57.286 34.615 10.60 3.60 43.92 3.62
5236 5521 9.729281 AAAAGACAAATACTCCGTATTTAGGAA 57.271 29.630 10.60 0.00 43.92 3.36
5237 5522 9.729281 AAAAAGACAAATACTCCGTATTTAGGA 57.271 29.630 10.60 0.00 43.92 2.94
5245 5530 9.503399 AAATCTCTAAAAAGACAAATACTCCGT 57.497 29.630 0.00 0.00 0.00 4.69
5246 5531 9.974750 GAAATCTCTAAAAAGACAAATACTCCG 57.025 33.333 0.00 0.00 0.00 4.63
5254 5539 9.965824 GTCCATTTGAAATCTCTAAAAAGACAA 57.034 29.630 0.00 0.00 0.00 3.18
5255 5540 9.354673 AGTCCATTTGAAATCTCTAAAAAGACA 57.645 29.630 0.00 0.00 0.00 3.41
5260 5545 9.567776 TGTGTAGTCCATTTGAAATCTCTAAAA 57.432 29.630 0.00 0.00 0.00 1.52
5261 5546 9.739276 ATGTGTAGTCCATTTGAAATCTCTAAA 57.261 29.630 0.00 0.00 0.00 1.85
5264 5549 9.334947 CATATGTGTAGTCCATTTGAAATCTCT 57.665 33.333 0.00 0.00 0.00 3.10
5265 5550 8.562892 CCATATGTGTAGTCCATTTGAAATCTC 58.437 37.037 1.24 0.00 0.00 2.75
5266 5551 8.274322 TCCATATGTGTAGTCCATTTGAAATCT 58.726 33.333 1.24 0.00 0.00 2.40
5267 5552 8.450578 TCCATATGTGTAGTCCATTTGAAATC 57.549 34.615 1.24 0.00 0.00 2.17
5268 5553 8.853126 CATCCATATGTGTAGTCCATTTGAAAT 58.147 33.333 1.24 0.00 0.00 2.17
5269 5554 7.833682 ACATCCATATGTGTAGTCCATTTGAAA 59.166 33.333 1.24 0.00 44.79 2.69
5270 5555 7.345691 ACATCCATATGTGTAGTCCATTTGAA 58.654 34.615 1.24 0.00 44.79 2.69
5271 5556 6.899089 ACATCCATATGTGTAGTCCATTTGA 58.101 36.000 1.24 0.00 44.79 2.69
5272 5557 8.853077 ATACATCCATATGTGTAGTCCATTTG 57.147 34.615 10.78 0.00 45.99 2.32
5314 5599 7.062839 GTGACTTCAAGATGAGTGAATCTACAC 59.937 40.741 0.00 0.00 35.83 2.90
5315 5600 7.039434 AGTGACTTCAAGATGAGTGAATCTACA 60.039 37.037 0.00 0.00 35.83 2.74
5316 5601 7.319646 AGTGACTTCAAGATGAGTGAATCTAC 58.680 38.462 0.00 0.00 35.83 2.59
5317 5602 7.473735 AGTGACTTCAAGATGAGTGAATCTA 57.526 36.000 0.00 0.00 35.83 1.98
5318 5603 6.357579 AGTGACTTCAAGATGAGTGAATCT 57.642 37.500 0.00 0.00 38.59 2.40
5319 5604 8.715191 ATAAGTGACTTCAAGATGAGTGAATC 57.285 34.615 0.00 0.00 34.59 2.52
5320 5605 8.944029 CAATAAGTGACTTCAAGATGAGTGAAT 58.056 33.333 0.00 0.00 34.59 2.57
5321 5606 8.150296 TCAATAAGTGACTTCAAGATGAGTGAA 58.850 33.333 0.00 0.00 33.97 3.18
5322 5607 7.670364 TCAATAAGTGACTTCAAGATGAGTGA 58.330 34.615 0.00 0.00 0.00 3.41
5323 5608 7.895975 TCAATAAGTGACTTCAAGATGAGTG 57.104 36.000 0.00 0.00 0.00 3.51
5324 5609 8.908786 TTTCAATAAGTGACTTCAAGATGAGT 57.091 30.769 0.00 0.00 35.39 3.41
5325 5610 9.985318 GATTTCAATAAGTGACTTCAAGATGAG 57.015 33.333 0.00 0.00 35.39 2.90
5326 5611 9.730705 AGATTTCAATAAGTGACTTCAAGATGA 57.269 29.630 0.00 0.00 35.39 2.92
5327 5612 9.985318 GAGATTTCAATAAGTGACTTCAAGATG 57.015 33.333 0.00 0.00 35.39 2.90
5328 5613 9.956640 AGAGATTTCAATAAGTGACTTCAAGAT 57.043 29.630 0.00 0.00 35.39 2.40
5355 5640 8.013378 CGTCCGTTTTTACATATTTGTCTTTCT 58.987 33.333 0.00 0.00 37.28 2.52
5356 5641 8.011106 TCGTCCGTTTTTACATATTTGTCTTTC 58.989 33.333 0.00 0.00 37.28 2.62
5357 5642 7.863666 TCGTCCGTTTTTACATATTTGTCTTT 58.136 30.769 0.00 0.00 37.28 2.52
5358 5643 7.424227 TCGTCCGTTTTTACATATTTGTCTT 57.576 32.000 0.00 0.00 37.28 3.01
5359 5644 7.172019 ACTTCGTCCGTTTTTACATATTTGTCT 59.828 33.333 0.00 0.00 37.28 3.41
5360 5645 7.293018 ACTTCGTCCGTTTTTACATATTTGTC 58.707 34.615 0.00 0.00 37.28 3.18
5361 5646 7.193377 ACTTCGTCCGTTTTTACATATTTGT 57.807 32.000 0.00 0.00 39.98 2.83
5362 5647 8.437742 AGTACTTCGTCCGTTTTTACATATTTG 58.562 33.333 0.00 0.00 0.00 2.32
5363 5648 8.538409 AGTACTTCGTCCGTTTTTACATATTT 57.462 30.769 0.00 0.00 0.00 1.40
5364 5649 8.538409 AAGTACTTCGTCCGTTTTTACATATT 57.462 30.769 1.12 0.00 0.00 1.28
5365 5650 8.437742 CAAAGTACTTCGTCCGTTTTTACATAT 58.562 33.333 8.95 0.00 0.00 1.78
5366 5651 7.651304 TCAAAGTACTTCGTCCGTTTTTACATA 59.349 33.333 8.95 0.00 0.00 2.29
5367 5652 6.479660 TCAAAGTACTTCGTCCGTTTTTACAT 59.520 34.615 8.95 0.00 0.00 2.29
5368 5653 5.809562 TCAAAGTACTTCGTCCGTTTTTACA 59.190 36.000 8.95 0.00 0.00 2.41
5369 5654 6.272698 TCAAAGTACTTCGTCCGTTTTTAC 57.727 37.500 8.95 0.00 0.00 2.01
5370 5655 6.534793 ACTTCAAAGTACTTCGTCCGTTTTTA 59.465 34.615 8.95 0.00 37.52 1.52
5371 5656 5.352293 ACTTCAAAGTACTTCGTCCGTTTTT 59.648 36.000 8.95 0.00 37.52 1.94
5372 5657 4.872124 ACTTCAAAGTACTTCGTCCGTTTT 59.128 37.500 8.95 0.00 37.52 2.43
5373 5658 4.436332 ACTTCAAAGTACTTCGTCCGTTT 58.564 39.130 8.95 0.00 37.52 3.60
5374 5659 4.050852 ACTTCAAAGTACTTCGTCCGTT 57.949 40.909 8.95 0.00 37.52 4.44
5375 5660 3.722728 ACTTCAAAGTACTTCGTCCGT 57.277 42.857 8.95 0.51 37.52 4.69
5376 5661 3.119136 CGAACTTCAAAGTACTTCGTCCG 59.881 47.826 8.95 0.44 38.57 4.79
5377 5662 4.293415 TCGAACTTCAAAGTACTTCGTCC 58.707 43.478 8.95 0.00 38.57 4.79
5378 5663 5.878261 TTCGAACTTCAAAGTACTTCGTC 57.122 39.130 8.95 0.13 38.57 4.20
5379 5664 5.404667 GGATTCGAACTTCAAAGTACTTCGT 59.595 40.000 8.95 1.57 38.57 3.85
5380 5665 5.404366 TGGATTCGAACTTCAAAGTACTTCG 59.596 40.000 8.95 6.56 38.57 3.79
5381 5666 6.780706 TGGATTCGAACTTCAAAGTACTTC 57.219 37.500 8.95 0.00 38.57 3.01
5382 5667 6.348540 GCATGGATTCGAACTTCAAAGTACTT 60.349 38.462 1.12 1.12 38.57 2.24
5383 5668 5.122396 GCATGGATTCGAACTTCAAAGTACT 59.878 40.000 0.00 0.00 38.57 2.73
5384 5669 5.106712 TGCATGGATTCGAACTTCAAAGTAC 60.107 40.000 0.00 0.00 38.57 2.73
5385 5670 5.000591 TGCATGGATTCGAACTTCAAAGTA 58.999 37.500 0.00 0.00 38.57 2.24
5386 5671 3.820467 TGCATGGATTCGAACTTCAAAGT 59.180 39.130 0.00 0.00 42.04 2.66
5387 5672 4.154737 TCTGCATGGATTCGAACTTCAAAG 59.845 41.667 0.00 0.36 0.00 2.77
5388 5673 4.071423 TCTGCATGGATTCGAACTTCAAA 58.929 39.130 0.00 0.00 0.00 2.69
5389 5674 3.436704 GTCTGCATGGATTCGAACTTCAA 59.563 43.478 0.00 0.00 0.00 2.69
5390 5675 3.002791 GTCTGCATGGATTCGAACTTCA 58.997 45.455 0.00 0.00 0.00 3.02
5391 5676 2.352960 GGTCTGCATGGATTCGAACTTC 59.647 50.000 0.00 0.00 0.00 3.01
5392 5677 2.026822 AGGTCTGCATGGATTCGAACTT 60.027 45.455 0.00 0.00 0.00 2.66
5393 5678 1.556911 AGGTCTGCATGGATTCGAACT 59.443 47.619 0.00 0.00 0.00 3.01
5394 5679 1.667724 CAGGTCTGCATGGATTCGAAC 59.332 52.381 0.00 0.00 0.00 3.95
5397 5682 1.134580 AGACAGGTCTGCATGGATTCG 60.135 52.381 0.22 0.00 38.75 3.34
5401 5686 2.957402 AAAAGACAGGTCTGCATGGA 57.043 45.000 2.15 0.00 40.36 3.41
5444 5729 2.017782 CAGCAGAATGAGCAGCAGAAT 58.982 47.619 0.00 0.00 39.69 2.40
5447 5732 1.027255 AGCAGCAGAATGAGCAGCAG 61.027 55.000 5.41 0.00 45.53 4.24
5520 5805 7.982354 GCTTAACTGACAGTCTGTTATTCCTAT 59.018 37.037 25.40 7.76 39.43 2.57
5543 5828 6.267471 TGTGGTTTATTCATGAGAAAAGGCTT 59.733 34.615 0.00 0.00 37.29 4.35
5627 5915 5.203358 TGTTGTTGAATTCTATCGCTTCG 57.797 39.130 7.05 0.00 0.00 3.79
5632 5920 9.655769 CCTATGATTTGTTGTTGAATTCTATCG 57.344 33.333 7.05 0.00 0.00 2.92
5786 6076 5.674569 GCTTCAATGCTTAATGTCGATGTGT 60.675 40.000 0.00 0.00 0.00 3.72
5850 6149 9.044150 CCGTCCCATAATATAAAAACGTTTAGA 57.956 33.333 15.03 5.58 32.76 2.10
5851 6150 8.829612 ACCGTCCCATAATATAAAAACGTTTAG 58.170 33.333 15.03 0.00 32.76 1.85
5852 6151 8.610896 CACCGTCCCATAATATAAAAACGTTTA 58.389 33.333 15.03 0.00 33.76 2.01
5860 6211 4.909088 ACTCCCACCGTCCCATAATATAAA 59.091 41.667 0.00 0.00 0.00 1.40
5915 6266 2.787723 AAAAATCACGTGCGATCTCG 57.212 45.000 11.67 0.00 43.27 4.04
5936 6287 4.570930 AGTTTTTGCCTCCGTTTCAAAAA 58.429 34.783 7.69 7.69 43.27 1.94
5937 6288 4.195225 AGTTTTTGCCTCCGTTTCAAAA 57.805 36.364 0.00 0.00 37.75 2.44
5938 6289 3.878160 AGTTTTTGCCTCCGTTTCAAA 57.122 38.095 0.00 0.00 0.00 2.69
5939 6290 3.878160 AAGTTTTTGCCTCCGTTTCAA 57.122 38.095 0.00 0.00 0.00 2.69
5940 6291 3.516615 CAAAGTTTTTGCCTCCGTTTCA 58.483 40.909 0.00 0.00 0.00 2.69
5941 6292 2.284150 GCAAAGTTTTTGCCTCCGTTTC 59.716 45.455 13.97 0.00 39.38 2.78
5942 6293 2.276201 GCAAAGTTTTTGCCTCCGTTT 58.724 42.857 13.97 0.00 39.38 3.60
5943 6294 1.934589 GCAAAGTTTTTGCCTCCGTT 58.065 45.000 13.97 0.00 39.38 4.44
5944 6295 3.659850 GCAAAGTTTTTGCCTCCGT 57.340 47.368 13.97 0.00 39.38 4.69
5950 6301 3.110447 TGGATGAGGCAAAGTTTTTGC 57.890 42.857 16.05 16.05 44.22 3.68
5951 6302 5.299148 TCAATGGATGAGGCAAAGTTTTTG 58.701 37.500 0.00 0.00 33.04 2.44
5952 6303 5.549742 TCAATGGATGAGGCAAAGTTTTT 57.450 34.783 0.00 0.00 33.04 1.94
5953 6304 5.549742 TTCAATGGATGAGGCAAAGTTTT 57.450 34.783 0.00 0.00 39.77 2.43
5954 6305 5.750352 ATTCAATGGATGAGGCAAAGTTT 57.250 34.783 0.00 0.00 39.77 2.66
5955 6306 6.664816 TCTTATTCAATGGATGAGGCAAAGTT 59.335 34.615 0.00 0.00 39.77 2.66
5956 6307 6.189859 TCTTATTCAATGGATGAGGCAAAGT 58.810 36.000 0.00 0.00 39.77 2.66
5957 6308 6.544931 TCTCTTATTCAATGGATGAGGCAAAG 59.455 38.462 0.00 0.00 39.77 2.77
5958 6309 6.425735 TCTCTTATTCAATGGATGAGGCAAA 58.574 36.000 0.00 0.00 39.77 3.68
5959 6310 6.005066 TCTCTTATTCAATGGATGAGGCAA 57.995 37.500 0.00 0.00 39.77 4.52
5960 6311 5.367644 TCTCTCTTATTCAATGGATGAGGCA 59.632 40.000 0.00 0.00 39.77 4.75
5961 6312 5.862845 TCTCTCTTATTCAATGGATGAGGC 58.137 41.667 0.00 0.00 39.77 4.70
5962 6313 9.656040 CTATTCTCTCTTATTCAATGGATGAGG 57.344 37.037 0.00 0.00 39.77 3.86
5978 6329 9.249053 TGACTTGTATCAAACTCTATTCTCTCT 57.751 33.333 0.00 0.00 0.00 3.10
5979 6330 9.296400 GTGACTTGTATCAAACTCTATTCTCTC 57.704 37.037 0.00 0.00 0.00 3.20
5980 6331 9.030452 AGTGACTTGTATCAAACTCTATTCTCT 57.970 33.333 0.00 0.00 0.00 3.10
5981 6332 9.296400 GAGTGACTTGTATCAAACTCTATTCTC 57.704 37.037 0.00 0.00 0.00 2.87
5982 6333 8.807118 TGAGTGACTTGTATCAAACTCTATTCT 58.193 33.333 11.45 0.00 0.00 2.40
5983 6334 8.988064 TGAGTGACTTGTATCAAACTCTATTC 57.012 34.615 11.45 0.00 0.00 1.75
5984 6335 9.950496 ATTGAGTGACTTGTATCAAACTCTATT 57.050 29.630 11.45 0.00 35.47 1.73
5986 6337 9.856488 GTATTGAGTGACTTGTATCAAACTCTA 57.144 33.333 11.45 6.79 35.47 2.43
5987 6338 8.367911 TGTATTGAGTGACTTGTATCAAACTCT 58.632 33.333 11.45 3.94 35.47 3.24
5988 6339 8.436200 GTGTATTGAGTGACTTGTATCAAACTC 58.564 37.037 0.00 0.00 35.47 3.01
5989 6340 7.116376 CGTGTATTGAGTGACTTGTATCAAACT 59.884 37.037 0.00 0.00 35.47 2.66
5990 6341 7.227461 CGTGTATTGAGTGACTTGTATCAAAC 58.773 38.462 0.00 0.00 35.47 2.93
5991 6342 6.367695 CCGTGTATTGAGTGACTTGTATCAAA 59.632 38.462 0.00 0.00 35.47 2.69
5992 6343 5.867174 CCGTGTATTGAGTGACTTGTATCAA 59.133 40.000 0.00 0.00 36.22 2.57
5993 6344 5.407502 CCGTGTATTGAGTGACTTGTATCA 58.592 41.667 0.00 0.00 0.00 2.15
5994 6345 4.267928 GCCGTGTATTGAGTGACTTGTATC 59.732 45.833 0.00 0.00 0.00 2.24
5995 6346 4.181578 GCCGTGTATTGAGTGACTTGTAT 58.818 43.478 0.00 0.00 0.00 2.29
5996 6347 3.006003 TGCCGTGTATTGAGTGACTTGTA 59.994 43.478 0.00 0.00 0.00 2.41
5997 6348 2.224185 TGCCGTGTATTGAGTGACTTGT 60.224 45.455 0.00 0.00 0.00 3.16
5998 6349 2.412870 TGCCGTGTATTGAGTGACTTG 58.587 47.619 0.00 0.00 0.00 3.16
5999 6350 2.831685 TGCCGTGTATTGAGTGACTT 57.168 45.000 0.00 0.00 0.00 3.01
6000 6351 2.233676 TCATGCCGTGTATTGAGTGACT 59.766 45.455 0.00 0.00 0.00 3.41
6001 6352 2.348666 GTCATGCCGTGTATTGAGTGAC 59.651 50.000 0.00 0.00 0.00 3.67
6002 6353 2.028567 TGTCATGCCGTGTATTGAGTGA 60.029 45.455 0.00 0.00 0.00 3.41
6003 6354 2.345876 TGTCATGCCGTGTATTGAGTG 58.654 47.619 0.00 0.00 0.00 3.51
6004 6355 2.760634 TGTCATGCCGTGTATTGAGT 57.239 45.000 0.00 0.00 0.00 3.41
6005 6356 3.197265 TGATGTCATGCCGTGTATTGAG 58.803 45.455 0.00 0.00 0.00 3.02
6006 6357 3.258971 TGATGTCATGCCGTGTATTGA 57.741 42.857 0.00 0.00 0.00 2.57
6007 6358 4.274214 AGAATGATGTCATGCCGTGTATTG 59.726 41.667 0.00 0.00 36.56 1.90
6008 6359 4.454678 AGAATGATGTCATGCCGTGTATT 58.545 39.130 0.00 0.00 36.56 1.89
6009 6360 4.060900 GAGAATGATGTCATGCCGTGTAT 58.939 43.478 0.00 0.00 36.56 2.29
6010 6361 3.457234 GAGAATGATGTCATGCCGTGTA 58.543 45.455 0.00 0.00 36.56 2.90
6011 6362 2.283298 GAGAATGATGTCATGCCGTGT 58.717 47.619 0.00 0.00 36.56 4.49
6012 6363 1.259770 CGAGAATGATGTCATGCCGTG 59.740 52.381 0.00 0.00 36.56 4.94
6013 6364 1.575244 CGAGAATGATGTCATGCCGT 58.425 50.000 0.00 0.00 36.56 5.68
6014 6365 0.234106 GCGAGAATGATGTCATGCCG 59.766 55.000 0.00 2.57 36.56 5.69
6015 6366 0.234106 CGCGAGAATGATGTCATGCC 59.766 55.000 0.00 0.00 36.56 4.40
6016 6367 1.211743 TCGCGAGAATGATGTCATGC 58.788 50.000 3.71 0.00 36.56 4.06
6028 6379 5.509716 TTAGAGTCCATTATTTCGCGAGA 57.490 39.130 9.59 4.97 39.20 4.04
6029 6380 6.771188 AATTAGAGTCCATTATTTCGCGAG 57.229 37.500 9.59 0.00 0.00 5.03
6030 6381 7.548196 AAAATTAGAGTCCATTATTTCGCGA 57.452 32.000 3.71 3.71 0.00 5.87
6059 6410 2.359354 TTTGGGTCATCGGCGGTG 60.359 61.111 15.31 15.31 0.00 4.94
6060 6411 2.046314 CTTTGGGTCATCGGCGGT 60.046 61.111 7.21 0.00 0.00 5.68
6061 6412 2.824041 CCTTTGGGTCATCGGCGG 60.824 66.667 7.21 0.00 0.00 6.13
6062 6413 1.674322 AACCTTTGGGTCATCGGCG 60.674 57.895 0.00 0.00 46.67 6.46
6063 6414 1.595093 CCAACCTTTGGGTCATCGGC 61.595 60.000 0.00 0.00 46.67 5.54
6064 6415 2.566824 CCAACCTTTGGGTCATCGG 58.433 57.895 0.00 0.00 46.67 4.18
6077 6428 1.700955 TATAGAGACCGAGGCCAACC 58.299 55.000 5.01 0.00 0.00 3.77
6078 6429 3.492829 CCTTTATAGAGACCGAGGCCAAC 60.493 52.174 5.01 0.00 0.00 3.77
6079 6430 2.698797 CCTTTATAGAGACCGAGGCCAA 59.301 50.000 5.01 0.00 0.00 4.52
6080 6431 2.317040 CCTTTATAGAGACCGAGGCCA 58.683 52.381 5.01 0.00 0.00 5.36
6081 6432 1.001068 GCCTTTATAGAGACCGAGGCC 59.999 57.143 0.00 0.00 42.90 5.19
6082 6433 2.442212 GCCTTTATAGAGACCGAGGC 57.558 55.000 0.00 0.00 42.35 4.70
6083 6434 3.800604 GCTTGCCTTTATAGAGACCGAGG 60.801 52.174 0.00 0.00 0.00 4.63
6084 6435 3.181475 TGCTTGCCTTTATAGAGACCGAG 60.181 47.826 0.00 0.00 0.00 4.63
6085 6436 2.764010 TGCTTGCCTTTATAGAGACCGA 59.236 45.455 0.00 0.00 0.00 4.69
6086 6437 3.179443 TGCTTGCCTTTATAGAGACCG 57.821 47.619 0.00 0.00 0.00 4.79
6087 6438 5.897377 TTTTGCTTGCCTTTATAGAGACC 57.103 39.130 0.00 0.00 0.00 3.85
6088 6439 8.214721 ACTATTTTGCTTGCCTTTATAGAGAC 57.785 34.615 0.00 0.00 0.00 3.36
6089 6440 8.677300 CAACTATTTTGCTTGCCTTTATAGAGA 58.323 33.333 0.00 0.00 0.00 3.10
6090 6441 7.917505 CCAACTATTTTGCTTGCCTTTATAGAG 59.082 37.037 0.00 0.00 0.00 2.43
6091 6442 7.613801 TCCAACTATTTTGCTTGCCTTTATAGA 59.386 33.333 0.00 0.00 0.00 1.98
6092 6443 7.771183 TCCAACTATTTTGCTTGCCTTTATAG 58.229 34.615 0.00 0.00 0.00 1.31
6093 6444 7.147915 CCTCCAACTATTTTGCTTGCCTTTATA 60.148 37.037 0.00 0.00 0.00 0.98
6094 6445 6.351286 CCTCCAACTATTTTGCTTGCCTTTAT 60.351 38.462 0.00 0.00 0.00 1.40
6095 6446 5.047377 CCTCCAACTATTTTGCTTGCCTTTA 60.047 40.000 0.00 0.00 0.00 1.85
6096 6447 4.262592 CCTCCAACTATTTTGCTTGCCTTT 60.263 41.667 0.00 0.00 0.00 3.11
6097 6448 3.259123 CCTCCAACTATTTTGCTTGCCTT 59.741 43.478 0.00 0.00 0.00 4.35
6098 6449 2.827921 CCTCCAACTATTTTGCTTGCCT 59.172 45.455 0.00 0.00 0.00 4.75
6099 6450 2.825532 TCCTCCAACTATTTTGCTTGCC 59.174 45.455 0.00 0.00 0.00 4.52
6100 6451 3.674410 GCTCCTCCAACTATTTTGCTTGC 60.674 47.826 0.00 0.00 0.00 4.01
6101 6452 3.507233 TGCTCCTCCAACTATTTTGCTTG 59.493 43.478 0.00 0.00 0.00 4.01
6102 6453 3.507622 GTGCTCCTCCAACTATTTTGCTT 59.492 43.478 0.00 0.00 0.00 3.91
6103 6454 3.084786 GTGCTCCTCCAACTATTTTGCT 58.915 45.455 0.00 0.00 0.00 3.91
6104 6455 3.084786 AGTGCTCCTCCAACTATTTTGC 58.915 45.455 0.00 0.00 0.00 3.68
6105 6456 4.583871 AGAGTGCTCCTCCAACTATTTTG 58.416 43.478 0.00 0.00 41.47 2.44
6106 6457 4.917906 AGAGTGCTCCTCCAACTATTTT 57.082 40.909 0.00 0.00 41.47 1.82
6107 6458 4.042187 ACAAGAGTGCTCCTCCAACTATTT 59.958 41.667 0.00 0.00 41.47 1.40
6108 6459 3.584848 ACAAGAGTGCTCCTCCAACTATT 59.415 43.478 0.00 0.00 41.47 1.73
6109 6460 3.055530 CACAAGAGTGCTCCTCCAACTAT 60.056 47.826 0.00 0.00 41.47 2.12
6110 6461 2.300152 CACAAGAGTGCTCCTCCAACTA 59.700 50.000 0.00 0.00 41.47 2.24
6111 6462 1.071385 CACAAGAGTGCTCCTCCAACT 59.929 52.381 0.00 0.00 41.47 3.16
6112 6463 1.517242 CACAAGAGTGCTCCTCCAAC 58.483 55.000 0.00 0.00 41.47 3.77
6123 6474 1.771255 AGGGTCTTCAAGCACAAGAGT 59.229 47.619 0.00 0.00 30.32 3.24
6124 6475 2.551459 CAAGGGTCTTCAAGCACAAGAG 59.449 50.000 0.00 0.00 30.32 2.85
6125 6476 2.575532 CAAGGGTCTTCAAGCACAAGA 58.424 47.619 0.00 0.00 0.00 3.02
6126 6477 1.000938 GCAAGGGTCTTCAAGCACAAG 60.001 52.381 0.00 0.00 0.00 3.16
6127 6478 1.032014 GCAAGGGTCTTCAAGCACAA 58.968 50.000 0.00 0.00 0.00 3.33
6128 6479 1.165907 CGCAAGGGTCTTCAAGCACA 61.166 55.000 0.00 0.00 0.00 4.57
6129 6480 1.166531 ACGCAAGGGTCTTCAAGCAC 61.167 55.000 0.00 0.00 46.39 4.40
6130 6481 0.465460 AACGCAAGGGTCTTCAAGCA 60.465 50.000 0.00 0.00 46.39 3.91
6131 6482 0.668535 AAACGCAAGGGTCTTCAAGC 59.331 50.000 0.00 0.00 46.39 4.01
6132 6483 1.069906 CGAAACGCAAGGGTCTTCAAG 60.070 52.381 0.00 0.00 46.39 3.02
6133 6484 0.941542 CGAAACGCAAGGGTCTTCAA 59.058 50.000 0.00 0.00 46.39 2.69
6134 6485 2.612200 CGAAACGCAAGGGTCTTCA 58.388 52.632 0.00 0.00 46.39 3.02
6146 6497 0.937699 TGTCTGGAACGAGCGAAACG 60.938 55.000 0.00 0.00 0.00 3.60
6147 6498 0.784778 CTGTCTGGAACGAGCGAAAC 59.215 55.000 0.00 0.00 0.00 2.78
6148 6499 0.387929 ACTGTCTGGAACGAGCGAAA 59.612 50.000 0.00 0.00 0.00 3.46
6149 6500 0.039437 GACTGTCTGGAACGAGCGAA 60.039 55.000 0.00 0.00 0.00 4.70
6150 6501 1.579932 GACTGTCTGGAACGAGCGA 59.420 57.895 0.00 0.00 0.00 4.93
6151 6502 1.444553 GGACTGTCTGGAACGAGCG 60.445 63.158 7.85 0.00 0.00 5.03
6152 6503 0.667792 GTGGACTGTCTGGAACGAGC 60.668 60.000 7.85 0.00 0.00 5.03
6153 6504 0.387367 CGTGGACTGTCTGGAACGAG 60.387 60.000 7.85 0.00 33.03 4.18
6154 6505 0.820482 TCGTGGACTGTCTGGAACGA 60.820 55.000 17.65 17.65 37.68 3.85
6155 6506 0.031585 TTCGTGGACTGTCTGGAACG 59.968 55.000 7.85 12.25 0.00 3.95
6156 6507 1.865340 GTTTCGTGGACTGTCTGGAAC 59.135 52.381 7.85 5.83 0.00 3.62
6157 6508 1.483004 TGTTTCGTGGACTGTCTGGAA 59.517 47.619 7.85 6.25 0.00 3.53
6158 6509 1.116308 TGTTTCGTGGACTGTCTGGA 58.884 50.000 7.85 0.22 0.00 3.86
6159 6510 1.867233 CTTGTTTCGTGGACTGTCTGG 59.133 52.381 7.85 0.00 0.00 3.86
6160 6511 1.261619 GCTTGTTTCGTGGACTGTCTG 59.738 52.381 7.85 0.00 0.00 3.51
6161 6512 1.134521 TGCTTGTTTCGTGGACTGTCT 60.135 47.619 7.85 0.00 0.00 3.41
6162 6513 1.295792 TGCTTGTTTCGTGGACTGTC 58.704 50.000 0.00 0.00 0.00 3.51
6163 6514 1.603802 CATGCTTGTTTCGTGGACTGT 59.396 47.619 0.00 0.00 0.00 3.55
6164 6515 1.069022 CCATGCTTGTTTCGTGGACTG 60.069 52.381 0.00 0.00 41.91 3.51
6165 6516 1.238439 CCATGCTTGTTTCGTGGACT 58.762 50.000 0.00 0.00 41.91 3.85
6166 6517 0.951558 ACCATGCTTGTTTCGTGGAC 59.048 50.000 8.10 0.00 41.91 4.02
6167 6518 0.950836 CACCATGCTTGTTTCGTGGA 59.049 50.000 8.10 0.00 41.91 4.02
6168 6519 3.477504 CACCATGCTTGTTTCGTGG 57.522 52.632 0.00 0.00 44.23 4.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.