Multiple sequence alignment - TraesCS1B01G376000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G376000 chr1B 100.000 2791 0 0 1 2791 606850931 606848141 0.000000e+00 5155.0
1 TraesCS1B01G376000 chr1B 84.947 1136 127 22 1323 2428 608421367 608422488 0.000000e+00 1110.0
2 TraesCS1B01G376000 chr1B 84.859 1136 128 22 1323 2428 608403219 608404340 0.000000e+00 1105.0
3 TraesCS1B01G376000 chr1B 84.595 1136 126 24 1323 2428 608439865 608440981 0.000000e+00 1083.0
4 TraesCS1B01G376000 chr1B 83.552 687 91 16 3 685 608368834 608369502 1.040000e-174 623.0
5 TraesCS1B01G376000 chr1B 100.000 311 0 0 3105 3415 606847827 606847517 2.960000e-160 575.0
6 TraesCS1B01G376000 chr1B 86.908 359 27 7 436 777 606692655 606693010 5.350000e-103 385.0
7 TraesCS1B01G376000 chr1B 85.135 370 48 3 1 369 606691752 606692115 4.160000e-99 372.0
8 TraesCS1B01G376000 chr1B 88.623 167 13 3 1149 1310 608380110 608380275 7.480000e-47 198.0
9 TraesCS1B01G376000 chr1D 93.016 988 47 11 1323 2310 445325898 445324933 0.000000e+00 1423.0
10 TraesCS1B01G376000 chr1D 84.003 1144 129 29 1323 2428 445286633 445287760 0.000000e+00 1050.0
11 TraesCS1B01G376000 chr1D 81.964 937 122 30 1529 2428 445246767 445247693 0.000000e+00 750.0
12 TraesCS1B01G376000 chr1D 90.796 565 44 6 4 564 445331167 445330607 0.000000e+00 749.0
13 TraesCS1B01G376000 chr1D 86.351 696 78 12 1 690 445273740 445274424 0.000000e+00 743.0
14 TraesCS1B01G376000 chr1D 85.217 690 74 15 1 686 445253285 445253950 0.000000e+00 684.0
15 TraesCS1B01G376000 chr1D 89.423 312 28 5 3106 3415 391274941 391274633 4.130000e-104 388.0
16 TraesCS1B01G376000 chr1D 89.037 301 26 3 1022 1322 445326334 445326041 1.940000e-97 366.0
17 TraesCS1B01G376000 chr1D 87.402 254 20 7 1049 1300 445286225 445286468 7.220000e-72 281.0
18 TraesCS1B01G376000 chr1D 82.081 346 24 16 888 1231 445246407 445246716 9.400000e-66 261.0
19 TraesCS1B01G376000 chr1D 94.595 148 6 1 878 1023 445326532 445326385 9.530000e-56 228.0
20 TraesCS1B01G376000 chr1D 83.117 231 30 7 462 685 445248228 445248456 5.780000e-48 202.0
21 TraesCS1B01G376000 chr1D 84.293 191 14 11 561 736 445330575 445330386 4.530000e-39 172.0
22 TraesCS1B01G376000 chr1D 89.552 67 4 2 2422 2485 445324927 445324861 7.850000e-12 82.4
23 TraesCS1B01G376000 chr1A 93.846 715 36 4 1323 2036 541399452 541398745 0.000000e+00 1070.0
24 TraesCS1B01G376000 chr1A 81.206 1144 164 34 1323 2428 541146892 541148022 0.000000e+00 874.0
25 TraesCS1B01G376000 chr1A 84.466 927 101 29 1529 2428 541163995 541164905 0.000000e+00 874.0
26 TraesCS1B01G376000 chr1A 87.558 643 66 13 4 642 541431606 541430974 0.000000e+00 732.0
27 TraesCS1B01G376000 chr1A 94.352 301 14 1 1022 1322 541399898 541399601 3.110000e-125 459.0
28 TraesCS1B01G376000 chr1A 91.304 276 13 4 1048 1322 541146494 541146759 1.940000e-97 366.0
29 TraesCS1B01G376000 chr1A 93.571 140 9 0 884 1023 541400088 541399949 3.450000e-50 209.0
30 TraesCS1B01G376000 chr1A 95.455 44 2 0 2714 2757 541388898 541388855 1.700000e-08 71.3
31 TraesCS1B01G376000 chr1A 93.333 45 3 0 692 736 541430940 541430896 2.200000e-07 67.6
32 TraesCS1B01G376000 chr3D 89.869 306 27 3 3111 3415 579662076 579662378 1.150000e-104 390.0
33 TraesCS1B01G376000 chr3D 88.197 305 34 2 3113 3415 131575928 131575624 2.500000e-96 363.0
34 TraesCS1B01G376000 chr3D 86.731 309 38 3 3110 3415 111773100 111772792 1.170000e-89 340.0
35 TraesCS1B01G376000 chr7D 88.179 313 33 4 3105 3415 36224624 36224314 1.500000e-98 370.0
36 TraesCS1B01G376000 chr7D 93.220 118 7 1 2535 2652 2337863 2337979 4.530000e-39 172.0
37 TraesCS1B01G376000 chr7D 92.793 111 8 0 2538 2648 34224981 34225091 9.810000e-36 161.0
38 TraesCS1B01G376000 chr7D 81.818 143 26 0 1344 1486 568392970 568392828 1.660000e-23 121.0
39 TraesCS1B01G376000 chr7D 80.392 153 30 0 1340 1492 181008794 181008946 2.150000e-22 117.0
40 TraesCS1B01G376000 chr5D 87.987 308 34 3 3110 3415 421488488 421488794 9.010000e-96 361.0
41 TraesCS1B01G376000 chr5D 84.146 164 23 2 77 237 556699483 556699320 4.560000e-34 156.0
42 TraesCS1B01G376000 chr5D 90.000 100 7 2 317 416 447144605 447144509 3.580000e-25 126.0
43 TraesCS1B01G376000 chr4D 87.781 311 29 8 3110 3415 173184154 173183848 4.190000e-94 355.0
44 TraesCS1B01G376000 chr4D 84.146 164 23 2 76 237 422940121 422939959 4.560000e-34 156.0
45 TraesCS1B01G376000 chr4D 89.320 103 8 3 313 415 178827816 178827717 3.580000e-25 126.0
46 TraesCS1B01G376000 chr3B 87.662 308 34 4 3110 3415 797716266 797715961 4.190000e-94 355.0
47 TraesCS1B01G376000 chr5B 87.025 316 31 6 3110 3415 405598470 405598785 7.010000e-92 348.0
48 TraesCS1B01G376000 chr5B 92.661 109 8 0 2539 2647 599617754 599617646 1.270000e-34 158.0
49 TraesCS1B01G376000 chr5B 88.182 110 10 1 306 415 330460072 330460178 9.950000e-26 128.0
50 TraesCS1B01G376000 chr7A 86.667 165 18 4 73 234 88742566 88742729 2.710000e-41 180.0
51 TraesCS1B01G376000 chr7A 86.145 166 17 6 73 234 88685424 88685587 1.260000e-39 174.0
52 TraesCS1B01G376000 chr7A 80.000 145 29 0 1344 1488 657091296 657091152 1.300000e-19 108.0
53 TraesCS1B01G376000 chrUn 92.105 114 9 0 2535 2648 77508702 77508815 9.810000e-36 161.0
54 TraesCS1B01G376000 chr6B 91.525 118 8 2 2529 2645 214085039 214085155 9.810000e-36 161.0
55 TraesCS1B01G376000 chr6B 93.519 108 7 0 2538 2645 647267674 647267567 9.810000e-36 161.0
56 TraesCS1B01G376000 chr6A 91.453 117 10 0 2535 2651 162891828 162891712 9.810000e-36 161.0
57 TraesCS1B01G376000 chr6A 90.000 120 10 2 2534 2653 587781956 587782073 1.640000e-33 154.0
58 TraesCS1B01G376000 chr6A 87.156 109 10 3 317 424 468382000 468381895 1.660000e-23 121.0
59 TraesCS1B01G376000 chr2B 92.857 112 7 1 2534 2645 56775305 56775415 9.810000e-36 161.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G376000 chr1B 606847517 606850931 3414 True 2865.000000 5155 100.000000 1 3415 2 chr1B.!!$R1 3414
1 TraesCS1B01G376000 chr1B 608421367 608422488 1121 False 1110.000000 1110 84.947000 1323 2428 1 chr1B.!!$F4 1105
2 TraesCS1B01G376000 chr1B 608403219 608404340 1121 False 1105.000000 1105 84.859000 1323 2428 1 chr1B.!!$F3 1105
3 TraesCS1B01G376000 chr1B 608439865 608440981 1116 False 1083.000000 1083 84.595000 1323 2428 1 chr1B.!!$F5 1105
4 TraesCS1B01G376000 chr1B 608368834 608369502 668 False 623.000000 623 83.552000 3 685 1 chr1B.!!$F1 682
5 TraesCS1B01G376000 chr1B 606691752 606693010 1258 False 378.500000 385 86.021500 1 777 2 chr1B.!!$F6 776
6 TraesCS1B01G376000 chr1D 445273740 445274424 684 False 743.000000 743 86.351000 1 690 1 chr1D.!!$F2 689
7 TraesCS1B01G376000 chr1D 445253285 445253950 665 False 684.000000 684 85.217000 1 686 1 chr1D.!!$F1 685
8 TraesCS1B01G376000 chr1D 445286225 445287760 1535 False 665.500000 1050 85.702500 1049 2428 2 chr1D.!!$F4 1379
9 TraesCS1B01G376000 chr1D 445324861 445331167 6306 True 503.400000 1423 90.214833 4 2485 6 chr1D.!!$R2 2481
10 TraesCS1B01G376000 chr1D 445246407 445248456 2049 False 404.333333 750 82.387333 462 2428 3 chr1D.!!$F3 1966
11 TraesCS1B01G376000 chr1A 541163995 541164905 910 False 874.000000 874 84.466000 1529 2428 1 chr1A.!!$F1 899
12 TraesCS1B01G376000 chr1A 541146494 541148022 1528 False 620.000000 874 86.255000 1048 2428 2 chr1A.!!$F2 1380
13 TraesCS1B01G376000 chr1A 541398745 541400088 1343 True 579.333333 1070 93.923000 884 2036 3 chr1A.!!$R2 1152
14 TraesCS1B01G376000 chr1A 541430896 541431606 710 True 399.800000 732 90.445500 4 736 2 chr1A.!!$R3 732


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
875 1443 1.065709 GCAACCCCGGTCAGAGAAATA 60.066 52.381 0.0 0.0 0.0 1.4 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2713 7552 0.034767 CACAGGCATCACAGGGACAT 60.035 55.0 0.0 0.0 0.0 3.06 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 7.800155 TTACTTCTGATGTTGTTTGTGATGA 57.200 32.000 1.28 0.00 0.00 2.92
99 100 3.828921 ACTCCCACCAGTTCTTTTTACC 58.171 45.455 0.00 0.00 0.00 2.85
100 101 3.462205 ACTCCCACCAGTTCTTTTTACCT 59.538 43.478 0.00 0.00 0.00 3.08
201 202 7.065216 ACGAAATCATTATCATTAGATGCGG 57.935 36.000 0.00 0.00 35.67 5.69
203 204 6.402442 CGAAATCATTATCATTAGATGCGGCA 60.402 38.462 4.58 4.58 35.67 5.69
206 207 4.637091 TCATTATCATTAGATGCGGCATGG 59.363 41.667 21.98 4.65 35.67 3.66
221 222 6.757237 TGCGGCATGGATTTAATTTTCATAT 58.243 32.000 0.00 0.00 0.00 1.78
251 252 6.101274 ACTTTAGTACTCCCTCCTATCCAA 57.899 41.667 0.00 0.00 0.00 3.53
510 1008 3.247442 CGCACTACATTGTAGAACGGAA 58.753 45.455 26.58 0.00 0.00 4.30
518 1017 4.083324 ACATTGTAGAACGGAACAGCAATG 60.083 41.667 11.32 11.32 43.96 2.82
592 1131 2.256174 CGCATGCATGTTTGAAAGAGG 58.744 47.619 26.79 0.00 0.00 3.69
783 1351 3.334583 CCAGTAATGTGGTACTGTGCT 57.665 47.619 10.55 0.00 46.43 4.40
784 1352 4.465632 CCAGTAATGTGGTACTGTGCTA 57.534 45.455 10.55 0.00 46.43 3.49
785 1353 4.433615 CCAGTAATGTGGTACTGTGCTAG 58.566 47.826 10.55 0.00 46.43 3.42
786 1354 3.865745 CAGTAATGTGGTACTGTGCTAGC 59.134 47.826 8.10 8.10 43.99 3.42
788 1356 4.954202 AGTAATGTGGTACTGTGCTAGCTA 59.046 41.667 17.23 4.13 32.97 3.32
789 1357 4.819105 AATGTGGTACTGTGCTAGCTAA 57.181 40.909 17.23 2.87 0.00 3.09
791 1359 3.921677 TGTGGTACTGTGCTAGCTAAAC 58.078 45.455 17.23 6.50 0.00 2.01
792 1360 3.576982 TGTGGTACTGTGCTAGCTAAACT 59.423 43.478 17.23 0.00 0.00 2.66
794 1362 3.119602 TGGTACTGTGCTAGCTAAACTCG 60.120 47.826 17.23 4.45 0.00 4.18
795 1363 3.128242 GGTACTGTGCTAGCTAAACTCGA 59.872 47.826 17.23 0.00 0.00 4.04
796 1364 3.495670 ACTGTGCTAGCTAAACTCGAG 57.504 47.619 17.23 11.84 0.00 4.04
797 1365 2.189342 CTGTGCTAGCTAAACTCGAGC 58.811 52.381 17.23 0.00 40.42 5.03
798 1366 1.544246 TGTGCTAGCTAAACTCGAGCA 59.456 47.619 17.23 0.95 42.69 4.26
799 1367 2.279582 TGCTAGCTAAACTCGAGCAC 57.720 50.000 17.23 0.00 42.69 4.40
800 1368 1.819288 TGCTAGCTAAACTCGAGCACT 59.181 47.619 17.23 5.46 42.69 4.40
802 1370 3.632604 TGCTAGCTAAACTCGAGCACTAT 59.367 43.478 17.23 0.00 42.69 2.12
804 1372 5.473846 TGCTAGCTAAACTCGAGCACTATAT 59.526 40.000 17.23 0.00 42.69 0.86
805 1373 6.653740 TGCTAGCTAAACTCGAGCACTATATA 59.346 38.462 17.23 0.00 42.69 0.86
809 1377 6.938030 AGCTAAACTCGAGCACTATATAGTCT 59.062 38.462 13.61 12.29 42.69 3.24
810 1378 7.018826 GCTAAACTCGAGCACTATATAGTCTG 58.981 42.308 13.61 4.35 39.84 3.51
811 1379 7.095144 GCTAAACTCGAGCACTATATAGTCTGA 60.095 40.741 13.61 7.39 39.84 3.27
812 1380 7.569639 AAACTCGAGCACTATATAGTCTGAA 57.430 36.000 13.61 3.76 33.46 3.02
813 1381 7.569639 AACTCGAGCACTATATAGTCTGAAA 57.430 36.000 13.61 0.00 33.46 2.69
815 1383 7.997482 ACTCGAGCACTATATAGTCTGAAAAA 58.003 34.615 13.61 0.00 33.46 1.94
816 1384 8.634444 ACTCGAGCACTATATAGTCTGAAAAAT 58.366 33.333 13.61 0.00 33.46 1.82
818 1386 9.894783 TCGAGCACTATATAGTCTGAAAAATAC 57.105 33.333 12.62 0.00 33.46 1.89
819 1387 9.900710 CGAGCACTATATAGTCTGAAAAATACT 57.099 33.333 12.62 0.00 33.46 2.12
831 1399 8.989980 AGTCTGAAAAATACTACAGTAACTTGC 58.010 33.333 0.00 0.00 33.76 4.01
832 1400 8.770828 GTCTGAAAAATACTACAGTAACTTGCA 58.229 33.333 0.00 0.00 33.76 4.08
833 1401 9.502091 TCTGAAAAATACTACAGTAACTTGCAT 57.498 29.630 0.00 0.00 33.76 3.96
834 1402 9.546909 CTGAAAAATACTACAGTAACTTGCATG 57.453 33.333 0.00 0.00 33.76 4.06
835 1403 8.020819 TGAAAAATACTACAGTAACTTGCATGC 58.979 33.333 11.82 11.82 33.76 4.06
838 1406 7.687941 AATACTACAGTAACTTGCATGCTTT 57.312 32.000 20.33 11.67 33.76 3.51
839 1407 8.786826 AATACTACAGTAACTTGCATGCTTTA 57.213 30.769 20.33 10.67 33.76 1.85
840 1408 8.964476 ATACTACAGTAACTTGCATGCTTTAT 57.036 30.769 20.33 5.58 33.76 1.40
841 1409 7.687941 ACTACAGTAACTTGCATGCTTTATT 57.312 32.000 20.33 10.36 0.00 1.40
842 1410 7.752695 ACTACAGTAACTTGCATGCTTTATTC 58.247 34.615 20.33 5.86 0.00 1.75
843 1411 6.824305 ACAGTAACTTGCATGCTTTATTCT 57.176 33.333 20.33 8.06 0.00 2.40
845 1413 8.511604 ACAGTAACTTGCATGCTTTATTCTAT 57.488 30.769 20.33 0.00 0.00 1.98
846 1414 8.400947 ACAGTAACTTGCATGCTTTATTCTATG 58.599 33.333 20.33 9.78 0.00 2.23
847 1415 7.859377 CAGTAACTTGCATGCTTTATTCTATGG 59.141 37.037 20.33 0.00 0.00 2.74
848 1416 6.780457 AACTTGCATGCTTTATTCTATGGT 57.220 33.333 20.33 0.00 0.00 3.55
849 1417 6.382869 ACTTGCATGCTTTATTCTATGGTC 57.617 37.500 20.33 0.00 0.00 4.02
850 1418 5.887598 ACTTGCATGCTTTATTCTATGGTCA 59.112 36.000 20.33 0.00 0.00 4.02
853 1421 6.798482 TGCATGCTTTATTCTATGGTCAAAG 58.202 36.000 20.33 0.00 0.00 2.77
854 1422 6.377996 TGCATGCTTTATTCTATGGTCAAAGT 59.622 34.615 20.33 0.00 0.00 2.66
855 1423 6.694411 GCATGCTTTATTCTATGGTCAAAGTG 59.306 38.462 11.37 0.00 0.00 3.16
856 1424 6.194796 TGCTTTATTCTATGGTCAAAGTGC 57.805 37.500 0.00 0.00 0.00 4.40
857 1425 5.709631 TGCTTTATTCTATGGTCAAAGTGCA 59.290 36.000 0.00 0.00 0.00 4.57
858 1426 6.208402 TGCTTTATTCTATGGTCAAAGTGCAA 59.792 34.615 0.00 0.00 0.00 4.08
859 1427 6.528072 GCTTTATTCTATGGTCAAAGTGCAAC 59.472 38.462 0.00 0.00 0.00 4.17
860 1428 6.509418 TTATTCTATGGTCAAAGTGCAACC 57.491 37.500 0.00 0.00 37.80 3.77
862 1430 1.818674 CTATGGTCAAAGTGCAACCCC 59.181 52.381 2.10 0.00 37.80 4.95
863 1431 1.178534 ATGGTCAAAGTGCAACCCCG 61.179 55.000 2.10 0.00 37.80 5.73
864 1432 2.561037 GGTCAAAGTGCAACCCCGG 61.561 63.158 0.00 0.00 37.80 5.73
865 1433 1.826487 GTCAAAGTGCAACCCCGGT 60.826 57.895 0.00 0.00 37.80 5.28
868 1436 1.528309 AAAGTGCAACCCCGGTCAG 60.528 57.895 0.00 0.00 37.80 3.51
869 1437 1.990160 AAAGTGCAACCCCGGTCAGA 61.990 55.000 0.00 0.00 37.80 3.27
870 1438 2.358737 GTGCAACCCCGGTCAGAG 60.359 66.667 0.00 0.00 0.00 3.35
871 1439 2.525629 TGCAACCCCGGTCAGAGA 60.526 61.111 0.00 0.00 0.00 3.10
872 1440 2.144078 TGCAACCCCGGTCAGAGAA 61.144 57.895 0.00 0.00 0.00 2.87
875 1443 1.065709 GCAACCCCGGTCAGAGAAATA 60.066 52.381 0.00 0.00 0.00 1.40
876 1444 2.629051 CAACCCCGGTCAGAGAAATAC 58.371 52.381 0.00 0.00 0.00 1.89
879 1447 3.029570 ACCCCGGTCAGAGAAATACTAC 58.970 50.000 0.00 0.00 0.00 2.73
881 1449 3.068307 CCCCGGTCAGAGAAATACTACTG 59.932 52.174 0.00 0.00 0.00 2.74
950 5222 1.728179 CGAGTAGACGCGCTTTCAAGA 60.728 52.381 5.73 0.00 31.64 3.02
1095 5419 1.304464 GGGGGCAAGGAAGGAAGTG 60.304 63.158 0.00 0.00 0.00 3.16
1096 5420 1.767692 GGGGCAAGGAAGGAAGTGA 59.232 57.895 0.00 0.00 0.00 3.41
1097 5421 0.332972 GGGGCAAGGAAGGAAGTGAT 59.667 55.000 0.00 0.00 0.00 3.06
1268 5592 1.435515 GCTACCTCAGGAGCGTCAG 59.564 63.158 0.00 0.00 0.00 3.51
1278 5602 0.179124 GGAGCGTCAGTCAGGTGATC 60.179 60.000 0.00 0.00 0.00 2.92
1287 5616 4.894201 CAGGTGATCATCCTGGCC 57.106 61.111 25.09 11.62 46.03 5.36
1354 5863 3.891049 ACTCAACAAGGAGTTTCTTGCT 58.109 40.909 0.00 0.00 45.59 3.91
1376 5885 2.673341 TCCTGACGCTGAGCTCGT 60.673 61.111 9.64 3.56 43.49 4.18
1405 5914 0.982673 CGAATGTCGTCAACCTCGTC 59.017 55.000 4.75 0.00 34.72 4.20
1415 5924 2.867855 AACCTCGTCGGCTTCTGCA 61.868 57.895 0.00 0.00 41.91 4.41
1566 6079 6.154445 TCGAGTCTGTGTTGATTAACTAACC 58.846 40.000 1.75 0.00 37.68 2.85
1567 6080 5.924254 CGAGTCTGTGTTGATTAACTAACCA 59.076 40.000 1.75 0.00 37.68 3.67
1588 6101 1.067060 CACCGGATCGATCTTGTGCTA 59.933 52.381 23.96 0.00 0.00 3.49
1800 6314 1.644509 TCAGCTAGGTGCAGAGGAAA 58.355 50.000 17.20 0.00 45.94 3.13
1801 6315 2.191400 TCAGCTAGGTGCAGAGGAAAT 58.809 47.619 17.20 0.00 45.94 2.17
1802 6316 2.169352 TCAGCTAGGTGCAGAGGAAATC 59.831 50.000 17.20 0.00 45.94 2.17
1803 6317 2.093288 CAGCTAGGTGCAGAGGAAATCA 60.093 50.000 9.34 0.00 45.94 2.57
1970 6503 2.555199 GAGGATCGGAACCTTGTCATG 58.445 52.381 8.34 0.00 37.93 3.07
2045 6594 4.780275 TGATTTTGCCGTGAATGATTGA 57.220 36.364 0.00 0.00 0.00 2.57
2046 6595 5.327616 TGATTTTGCCGTGAATGATTGAT 57.672 34.783 0.00 0.00 0.00 2.57
2047 6596 5.342433 TGATTTTGCCGTGAATGATTGATC 58.658 37.500 0.00 0.00 0.00 2.92
2048 6597 5.125900 TGATTTTGCCGTGAATGATTGATCT 59.874 36.000 0.00 0.00 0.00 2.75
2055 6604 3.789756 CGTGAATGATTGATCTTTGCTGC 59.210 43.478 0.00 0.00 0.00 5.25
2073 6622 1.226802 CTGGATCAGGCGACACGAG 60.227 63.158 0.00 0.00 0.00 4.18
2094 6643 0.463474 GATGAAGGACAGGAGCCAGC 60.463 60.000 0.00 0.00 0.00 4.85
2143 6695 0.393077 GACCAGTATCCGTCCATGGG 59.607 60.000 13.02 0.00 35.26 4.00
2257 6809 4.916293 TGCCGCCTGCGATGATCC 62.916 66.667 13.94 0.00 45.60 3.36
2340 6903 1.615392 TCCAGACGCATCGATCATCAT 59.385 47.619 0.00 0.00 0.00 2.45
2341 6904 1.991264 CCAGACGCATCGATCATCATC 59.009 52.381 0.00 0.00 0.00 2.92
2342 6905 2.352519 CCAGACGCATCGATCATCATCT 60.353 50.000 0.00 0.00 0.00 2.90
2389 6970 0.310543 TGGTTGTGATTGTCGCTTGC 59.689 50.000 0.00 0.00 0.00 4.01
2413 7000 3.694072 GTGGAATAACAGTGCCTGCATAA 59.306 43.478 0.00 0.00 34.37 1.90
2485 7109 4.619227 AGGTGGAACGGTGTGCGG 62.619 66.667 0.00 0.00 38.12 5.69
2499 7141 0.674895 GTGCGGGAGTTTCAGCTGAT 60.675 55.000 19.04 1.77 0.00 2.90
2500 7142 0.674581 TGCGGGAGTTTCAGCTGATG 60.675 55.000 19.04 3.09 0.00 3.07
2501 7143 0.391661 GCGGGAGTTTCAGCTGATGA 60.392 55.000 19.04 6.73 35.62 2.92
2502 7144 1.945819 GCGGGAGTTTCAGCTGATGAA 60.946 52.381 19.04 7.03 46.31 2.57
2510 7152 3.885724 TTCAGCTGATGAACCGATACA 57.114 42.857 19.04 0.00 43.09 2.29
2511 7153 4.406648 TTCAGCTGATGAACCGATACAT 57.593 40.909 19.04 0.00 43.09 2.29
2513 7155 2.222678 CAGCTGATGAACCGATACATGC 59.777 50.000 8.42 0.00 0.00 4.06
2514 7156 2.103771 AGCTGATGAACCGATACATGCT 59.896 45.455 0.00 0.00 0.00 3.79
2515 7157 2.222678 GCTGATGAACCGATACATGCTG 59.777 50.000 0.00 0.00 0.00 4.41
2516 7158 3.721035 CTGATGAACCGATACATGCTGA 58.279 45.455 0.00 0.00 0.00 4.26
2517 7159 4.313282 CTGATGAACCGATACATGCTGAT 58.687 43.478 0.00 0.00 0.00 2.90
2519 7161 6.041423 TGATGAACCGATACATGCTGATAT 57.959 37.500 0.00 0.00 0.00 1.63
2520 7162 7.169158 TGATGAACCGATACATGCTGATATA 57.831 36.000 0.00 0.00 0.00 0.86
2521 7163 7.035612 TGATGAACCGATACATGCTGATATAC 58.964 38.462 0.00 0.00 0.00 1.47
2522 7164 6.339587 TGAACCGATACATGCTGATATACA 57.660 37.500 0.00 0.00 0.00 2.29
2523 7165 6.156519 TGAACCGATACATGCTGATATACAC 58.843 40.000 0.00 0.00 0.00 2.90
2525 7167 4.772624 ACCGATACATGCTGATATACACCT 59.227 41.667 0.00 0.00 0.00 4.00
2526 7168 5.105063 CCGATACATGCTGATATACACCTG 58.895 45.833 0.00 0.00 0.00 4.00
2527 7169 5.105756 CCGATACATGCTGATATACACCTGA 60.106 44.000 0.00 0.00 0.00 3.86
2529 7171 6.474751 CGATACATGCTGATATACACCTGATG 59.525 42.308 0.00 0.00 0.00 3.07
2530 7172 5.557576 ACATGCTGATATACACCTGATGT 57.442 39.130 0.00 0.00 46.06 3.06
2539 7181 3.706287 CACCTGATGTGCGTACGTA 57.294 52.632 17.90 10.06 38.34 3.57
2540 7182 1.265568 CACCTGATGTGCGTACGTAC 58.734 55.000 26.75 26.75 38.34 3.67
2542 7184 1.131883 ACCTGATGTGCGTACGTACTC 59.868 52.381 31.45 25.23 0.00 2.59
2543 7185 1.533338 CCTGATGTGCGTACGTACTCC 60.533 57.143 31.45 23.44 0.00 3.85
2546 7188 0.737219 ATGTGCGTACGTACTCCCTC 59.263 55.000 31.45 9.84 0.00 4.30
2547 7189 1.308069 TGTGCGTACGTACTCCCTCC 61.308 60.000 31.45 9.16 0.00 4.30
2548 7190 2.108514 TGCGTACGTACTCCCTCCG 61.109 63.158 22.55 9.39 0.00 4.63
2550 7192 2.009888 CGTACGTACTCCCTCCGTC 58.990 63.158 22.55 0.00 36.12 4.79
2551 7193 1.432270 CGTACGTACTCCCTCCGTCC 61.432 65.000 22.55 0.00 36.12 4.79
2552 7194 1.153369 TACGTACTCCCTCCGTCCG 60.153 63.158 0.00 0.00 36.12 4.79
2555 7377 1.308069 CGTACTCCCTCCGTCCGAAA 61.308 60.000 0.00 0.00 0.00 3.46
2558 7380 1.856629 ACTCCCTCCGTCCGAAATTA 58.143 50.000 0.00 0.00 0.00 1.40
2560 7382 2.770232 ACTCCCTCCGTCCGAAATTAAT 59.230 45.455 0.00 0.00 0.00 1.40
2562 7384 3.537580 TCCCTCCGTCCGAAATTAATTG 58.462 45.455 0.39 0.00 0.00 2.32
2564 7386 3.311596 CCCTCCGTCCGAAATTAATTGTC 59.688 47.826 0.39 1.54 0.00 3.18
2570 7392 5.289193 CCGTCCGAAATTAATTGTCGTAGAA 59.711 40.000 20.83 9.16 39.69 2.10
2571 7393 6.183360 CCGTCCGAAATTAATTGTCGTAGAAA 60.183 38.462 20.83 7.66 39.69 2.52
2573 7395 7.369800 CGTCCGAAATTAATTGTCGTAGAAATG 59.630 37.037 20.83 10.94 39.69 2.32
2618 7440 9.967346 TTAGTTCTAGATACATCCATTTTCGAG 57.033 33.333 0.00 0.00 0.00 4.04
2619 7441 8.239038 AGTTCTAGATACATCCATTTTCGAGA 57.761 34.615 0.00 0.00 0.00 4.04
2620 7442 8.138712 AGTTCTAGATACATCCATTTTCGAGAC 58.861 37.037 0.00 0.00 0.00 3.36
2627 7466 8.964476 ATACATCCATTTTCGAGACAAGTAAT 57.036 30.769 0.00 0.00 0.00 1.89
2628 7467 7.687941 ACATCCATTTTCGAGACAAGTAATT 57.312 32.000 0.00 0.00 0.00 1.40
2629 7468 8.110860 ACATCCATTTTCGAGACAAGTAATTT 57.889 30.769 0.00 0.00 0.00 1.82
2630 7469 8.237267 ACATCCATTTTCGAGACAAGTAATTTC 58.763 33.333 0.00 0.00 0.00 2.17
2631 7470 6.827641 TCCATTTTCGAGACAAGTAATTTCG 58.172 36.000 0.00 0.00 0.00 3.46
2638 7477 4.561606 CGAGACAAGTAATTTCGAACGGAT 59.438 41.667 0.00 0.00 33.38 4.18
2639 7478 5.498700 CGAGACAAGTAATTTCGAACGGATG 60.499 44.000 0.00 0.00 33.38 3.51
2645 7484 6.882458 AGTAATTTCGAACGGATGAAGTAC 57.118 37.500 0.00 0.00 0.00 2.73
2647 7486 7.039882 AGTAATTTCGAACGGATGAAGTACAT 58.960 34.615 0.00 0.00 42.47 2.29
2648 7487 6.737254 AATTTCGAACGGATGAAGTACATT 57.263 33.333 0.00 0.00 39.56 2.71
2649 7488 5.773239 TTTCGAACGGATGAAGTACATTC 57.227 39.130 0.00 0.00 39.56 2.67
2659 7498 2.677836 TGAAGTACATTCATTCGGCTGC 59.322 45.455 0.00 0.00 43.09 5.25
2661 7500 2.283298 AGTACATTCATTCGGCTGCTG 58.717 47.619 0.95 0.95 0.00 4.41
2662 7501 1.016627 TACATTCATTCGGCTGCTGC 58.983 50.000 7.10 7.10 38.76 5.25
2685 7524 4.448537 TGCAATGATTTAAGGGTTTCGG 57.551 40.909 0.00 0.00 0.00 4.30
2686 7525 3.186909 GCAATGATTTAAGGGTTTCGGC 58.813 45.455 0.00 0.00 0.00 5.54
2687 7526 3.119137 GCAATGATTTAAGGGTTTCGGCT 60.119 43.478 0.00 0.00 0.00 5.52
2688 7527 4.672409 CAATGATTTAAGGGTTTCGGCTC 58.328 43.478 0.00 0.00 0.00 4.70
2689 7528 3.426787 TGATTTAAGGGTTTCGGCTCA 57.573 42.857 0.00 0.00 0.00 4.26
2690 7529 3.757270 TGATTTAAGGGTTTCGGCTCAA 58.243 40.909 0.00 0.00 0.00 3.02
2691 7530 3.756434 TGATTTAAGGGTTTCGGCTCAAG 59.244 43.478 0.00 0.00 0.00 3.02
2692 7531 2.194201 TTAAGGGTTTCGGCTCAAGG 57.806 50.000 0.00 0.00 0.00 3.61
2693 7532 0.322187 TAAGGGTTTCGGCTCAAGGC 60.322 55.000 0.00 0.00 40.90 4.35
2696 7535 1.581447 GGTTTCGGCTCAAGGCTTG 59.419 57.895 21.17 21.17 41.46 4.01
2697 7536 1.172812 GGTTTCGGCTCAAGGCTTGT 61.173 55.000 25.39 0.00 41.46 3.16
2698 7537 0.040067 GTTTCGGCTCAAGGCTTGTG 60.040 55.000 25.39 23.42 41.46 3.33
2699 7538 1.172180 TTTCGGCTCAAGGCTTGTGG 61.172 55.000 25.39 19.41 41.46 4.17
2700 7539 2.032528 CGGCTCAAGGCTTGTGGA 59.967 61.111 25.39 7.02 41.46 4.02
2701 7540 2.037136 CGGCTCAAGGCTTGTGGAG 61.037 63.158 25.39 16.96 41.46 3.86
2702 7541 1.073897 GGCTCAAGGCTTGTGGAGT 59.926 57.895 25.39 0.00 41.46 3.85
2704 7543 0.595095 GCTCAAGGCTTGTGGAGTTG 59.405 55.000 25.39 10.00 38.06 3.16
2706 7545 1.605710 CTCAAGGCTTGTGGAGTTGTG 59.394 52.381 25.39 0.00 0.00 3.33
2707 7546 0.670162 CAAGGCTTGTGGAGTTGTGG 59.330 55.000 19.07 0.00 0.00 4.17
2708 7547 0.258774 AAGGCTTGTGGAGTTGTGGT 59.741 50.000 0.00 0.00 0.00 4.16
2709 7548 0.466189 AGGCTTGTGGAGTTGTGGTG 60.466 55.000 0.00 0.00 0.00 4.17
2710 7549 1.455383 GGCTTGTGGAGTTGTGGTGG 61.455 60.000 0.00 0.00 0.00 4.61
2712 7551 2.021723 GCTTGTGGAGTTGTGGTGGAA 61.022 52.381 0.00 0.00 0.00 3.53
2713 7552 2.374184 CTTGTGGAGTTGTGGTGGAAA 58.626 47.619 0.00 0.00 0.00 3.13
2715 7554 2.305928 TGTGGAGTTGTGGTGGAAATG 58.694 47.619 0.00 0.00 0.00 2.32
2716 7555 2.306847 GTGGAGTTGTGGTGGAAATGT 58.693 47.619 0.00 0.00 0.00 2.71
2718 7557 1.886542 GGAGTTGTGGTGGAAATGTCC 59.113 52.381 0.00 0.00 45.21 4.02
2719 7558 1.886542 GAGTTGTGGTGGAAATGTCCC 59.113 52.381 0.00 0.00 44.23 4.46
2720 7559 1.499007 AGTTGTGGTGGAAATGTCCCT 59.501 47.619 0.00 0.00 44.23 4.20
2723 7562 1.247567 GTGGTGGAAATGTCCCTGTG 58.752 55.000 0.00 0.00 44.23 3.66
2724 7563 1.144691 TGGTGGAAATGTCCCTGTGA 58.855 50.000 0.00 0.00 44.23 3.58
2726 7565 2.094675 GGTGGAAATGTCCCTGTGATG 58.905 52.381 0.00 0.00 44.23 3.07
2727 7566 1.474077 GTGGAAATGTCCCTGTGATGC 59.526 52.381 0.00 0.00 44.23 3.91
2728 7567 1.106285 GGAAATGTCCCTGTGATGCC 58.894 55.000 0.00 0.00 38.08 4.40
2729 7568 1.341383 GGAAATGTCCCTGTGATGCCT 60.341 52.381 0.00 0.00 38.08 4.75
2730 7569 1.747355 GAAATGTCCCTGTGATGCCTG 59.253 52.381 0.00 0.00 0.00 4.85
2731 7570 0.700564 AATGTCCCTGTGATGCCTGT 59.299 50.000 0.00 0.00 0.00 4.00
2732 7571 0.034767 ATGTCCCTGTGATGCCTGTG 60.035 55.000 0.00 0.00 0.00 3.66
2733 7572 2.042831 GTCCCTGTGATGCCTGTGC 61.043 63.158 0.00 0.00 38.26 4.57
2735 7574 1.303888 CCCTGTGATGCCTGTGCTT 60.304 57.895 0.00 0.00 38.71 3.91
2736 7575 1.310933 CCCTGTGATGCCTGTGCTTC 61.311 60.000 0.00 0.00 40.94 3.86
2737 7576 0.607217 CCTGTGATGCCTGTGCTTCA 60.607 55.000 0.00 0.00 46.05 3.02
2739 7578 3.991999 TGATGCCTGTGCTTCAGC 58.008 55.556 0.00 0.00 44.13 4.26
2740 7579 1.676635 TGATGCCTGTGCTTCAGCC 60.677 57.895 0.00 0.00 44.13 4.85
2741 7580 2.749044 ATGCCTGTGCTTCAGCCG 60.749 61.111 0.00 0.00 42.38 5.52
2743 7582 3.426568 GCCTGTGCTTCAGCCGAC 61.427 66.667 0.00 0.00 42.38 4.79
2744 7583 3.114616 CCTGTGCTTCAGCCGACG 61.115 66.667 0.00 0.00 42.38 5.12
2746 7585 1.956170 CTGTGCTTCAGCCGACGTT 60.956 57.895 0.00 0.00 41.18 3.99
2747 7586 2.162921 CTGTGCTTCAGCCGACGTTG 62.163 60.000 0.00 0.00 41.18 4.10
2748 7587 2.108157 TGCTTCAGCCGACGTTGT 59.892 55.556 1.30 0.00 41.18 3.32
2749 7588 1.954146 TGCTTCAGCCGACGTTGTC 60.954 57.895 1.30 0.00 41.18 3.18
2764 7603 4.293729 CGTTGTCGTTATGAGTGTTGAG 57.706 45.455 0.00 0.00 0.00 3.02
2765 7604 3.421826 CGTTGTCGTTATGAGTGTTGAGC 60.422 47.826 0.00 0.00 0.00 4.26
2766 7605 3.660501 TGTCGTTATGAGTGTTGAGCT 57.339 42.857 0.00 0.00 0.00 4.09
2768 7607 5.128992 TGTCGTTATGAGTGTTGAGCTTA 57.871 39.130 0.00 0.00 0.00 3.09
2769 7608 5.161358 TGTCGTTATGAGTGTTGAGCTTAG 58.839 41.667 0.00 0.00 0.00 2.18
2770 7609 5.048294 TGTCGTTATGAGTGTTGAGCTTAGA 60.048 40.000 0.00 0.00 0.00 2.10
2771 7610 5.513495 GTCGTTATGAGTGTTGAGCTTAGAG 59.487 44.000 0.00 0.00 0.00 2.43
2772 7611 4.266502 CGTTATGAGTGTTGAGCTTAGAGC 59.733 45.833 0.00 0.00 42.84 4.09
2774 7613 3.969287 TGAGTGTTGAGCTTAGAGCAT 57.031 42.857 2.47 0.00 45.56 3.79
2775 7614 3.854666 TGAGTGTTGAGCTTAGAGCATC 58.145 45.455 2.47 0.00 45.56 3.91
2786 7625 3.096791 GAGCATCTTCAGCCGTGC 58.903 61.111 0.00 0.00 37.84 5.34
2787 7626 2.437359 AGCATCTTCAGCCGTGCC 60.437 61.111 0.00 0.00 38.31 5.01
2788 7627 3.512516 GCATCTTCAGCCGTGCCC 61.513 66.667 0.00 0.00 0.00 5.36
2789 7628 2.825836 CATCTTCAGCCGTGCCCC 60.826 66.667 0.00 0.00 0.00 5.80
2790 7629 4.115199 ATCTTCAGCCGTGCCCCC 62.115 66.667 0.00 0.00 0.00 5.40
3122 7961 2.849081 ACAATAAACGGCCCAGTCG 58.151 52.632 0.00 0.00 36.42 4.18
3123 7962 1.303091 ACAATAAACGGCCCAGTCGC 61.303 55.000 0.00 0.00 32.11 5.19
3124 7963 2.104253 AATAAACGGCCCAGTCGCG 61.104 57.895 0.00 0.00 32.11 5.87
3132 7971 4.069232 CCCAGTCGCGCCTTCAGA 62.069 66.667 0.00 0.00 0.00 3.27
3133 7972 2.048222 CCAGTCGCGCCTTCAGAA 60.048 61.111 0.00 0.00 0.00 3.02
3134 7973 2.097038 CCAGTCGCGCCTTCAGAAG 61.097 63.158 0.00 2.78 0.00 2.85
3135 7974 1.373497 CAGTCGCGCCTTCAGAAGT 60.373 57.895 9.41 0.00 0.00 3.01
3136 7975 1.080434 AGTCGCGCCTTCAGAAGTC 60.080 57.895 9.41 0.00 0.00 3.01
3137 7976 2.095252 GTCGCGCCTTCAGAAGTCC 61.095 63.158 9.41 0.00 0.00 3.85
3138 7977 3.181967 CGCGCCTTCAGAAGTCCG 61.182 66.667 9.41 11.73 0.00 4.79
3139 7978 2.048127 GCGCCTTCAGAAGTCCGT 60.048 61.111 17.02 0.00 0.00 4.69
3140 7979 1.668151 GCGCCTTCAGAAGTCCGTT 60.668 57.895 17.02 0.00 0.00 4.44
3141 7980 1.228657 GCGCCTTCAGAAGTCCGTTT 61.229 55.000 17.02 0.00 0.00 3.60
3142 7981 1.226746 CGCCTTCAGAAGTCCGTTTT 58.773 50.000 9.41 0.00 0.00 2.43
3143 7982 1.602377 CGCCTTCAGAAGTCCGTTTTT 59.398 47.619 9.41 0.00 0.00 1.94
3144 7983 2.349532 CGCCTTCAGAAGTCCGTTTTTC 60.350 50.000 9.41 0.00 0.00 2.29
3145 7984 2.349532 GCCTTCAGAAGTCCGTTTTTCG 60.350 50.000 9.41 0.00 39.52 3.46
3146 7985 2.870411 CCTTCAGAAGTCCGTTTTTCGT 59.130 45.455 9.41 0.00 37.94 3.85
3147 7986 3.059800 CCTTCAGAAGTCCGTTTTTCGTC 60.060 47.826 9.41 0.00 37.94 4.20
3148 7987 2.121786 TCAGAAGTCCGTTTTTCGTCG 58.878 47.619 0.00 0.00 37.94 5.12
3149 7988 1.191647 CAGAAGTCCGTTTTTCGTCGG 59.808 52.381 0.00 0.00 46.93 4.79
3150 7989 1.202452 AGAAGTCCGTTTTTCGTCGGT 60.202 47.619 3.64 0.00 45.88 4.69
3151 7990 1.594397 GAAGTCCGTTTTTCGTCGGTT 59.406 47.619 3.64 0.00 45.88 4.44
3152 7991 1.211743 AGTCCGTTTTTCGTCGGTTC 58.788 50.000 3.64 0.00 45.88 3.62
3153 7992 0.111574 GTCCGTTTTTCGTCGGTTCG 60.112 55.000 3.64 0.00 45.88 3.95
3154 7993 1.202320 CCGTTTTTCGTCGGTTCGG 59.798 57.895 0.00 0.00 41.58 4.30
3155 7994 1.202320 CGTTTTTCGTCGGTTCGGG 59.798 57.895 0.00 0.00 34.52 5.14
3156 7995 1.082561 GTTTTTCGTCGGTTCGGGC 60.083 57.895 0.00 0.00 0.00 6.13
3157 7996 2.253051 TTTTTCGTCGGTTCGGGCC 61.253 57.895 0.00 0.00 0.00 5.80
3213 8052 3.012722 CTGGGGGAGCCGGGTAAA 61.013 66.667 5.91 0.00 0.00 2.01
3214 8053 3.332385 TGGGGGAGCCGGGTAAAC 61.332 66.667 5.91 0.00 0.00 2.01
3215 8054 4.119363 GGGGGAGCCGGGTAAACC 62.119 72.222 5.91 9.73 0.00 3.27
3226 8065 2.357327 GGGTAAACCGATTTTGGTGC 57.643 50.000 0.00 0.00 42.89 5.01
3227 8066 1.401800 GGGTAAACCGATTTTGGTGCG 60.402 52.381 0.00 0.00 42.89 5.34
3228 8067 1.536331 GGTAAACCGATTTTGGTGCGA 59.464 47.619 0.00 0.00 42.89 5.10
3229 8068 2.030981 GGTAAACCGATTTTGGTGCGAA 60.031 45.455 0.00 0.00 42.89 4.70
3230 8069 2.128367 AAACCGATTTTGGTGCGAAC 57.872 45.000 0.00 0.00 42.89 3.95
3231 8070 0.040781 AACCGATTTTGGTGCGAACG 60.041 50.000 0.00 0.00 42.89 3.95
3232 8071 1.154301 CCGATTTTGGTGCGAACGG 60.154 57.895 0.00 0.00 0.00 4.44
3233 8072 1.154301 CGATTTTGGTGCGAACGGG 60.154 57.895 0.00 0.00 0.00 5.28
3234 8073 1.570347 CGATTTTGGTGCGAACGGGA 61.570 55.000 0.00 0.00 0.00 5.14
3235 8074 0.594110 GATTTTGGTGCGAACGGGAA 59.406 50.000 0.00 0.00 0.00 3.97
3236 8075 1.201414 GATTTTGGTGCGAACGGGAAT 59.799 47.619 0.00 0.00 0.00 3.01
3237 8076 0.312416 TTTTGGTGCGAACGGGAATG 59.688 50.000 0.00 0.00 0.00 2.67
3238 8077 1.519751 TTTGGTGCGAACGGGAATGG 61.520 55.000 0.00 0.00 0.00 3.16
3239 8078 3.131478 GGTGCGAACGGGAATGGG 61.131 66.667 0.00 0.00 0.00 4.00
3240 8079 3.810896 GTGCGAACGGGAATGGGC 61.811 66.667 0.00 0.00 0.00 5.36
3249 8088 3.728373 GGAATGGGCCCACCGAGT 61.728 66.667 31.51 8.16 44.64 4.18
3250 8089 2.124695 GAATGGGCCCACCGAGTC 60.125 66.667 31.51 15.80 44.64 3.36
3251 8090 2.933287 AATGGGCCCACCGAGTCA 60.933 61.111 31.51 0.00 44.64 3.41
3252 8091 2.876368 GAATGGGCCCACCGAGTCAG 62.876 65.000 31.51 0.00 44.64 3.51
3257 8096 3.680786 CCCACCGAGTCAGCGACA 61.681 66.667 10.52 0.00 34.60 4.35
3258 8097 2.430921 CCACCGAGTCAGCGACAC 60.431 66.667 10.52 4.32 34.60 3.67
3259 8098 2.801162 CACCGAGTCAGCGACACG 60.801 66.667 16.67 16.67 43.84 4.49
3276 8115 2.180017 GCCGCTTCGTCGTCCTTA 59.820 61.111 0.00 0.00 0.00 2.69
3277 8116 1.226888 GCCGCTTCGTCGTCCTTAT 60.227 57.895 0.00 0.00 0.00 1.73
3278 8117 1.207377 GCCGCTTCGTCGTCCTTATC 61.207 60.000 0.00 0.00 0.00 1.75
3279 8118 0.928908 CCGCTTCGTCGTCCTTATCG 60.929 60.000 0.00 0.00 0.00 2.92
3280 8119 1.529883 CGCTTCGTCGTCCTTATCGC 61.530 60.000 0.00 0.00 0.00 4.58
3281 8120 1.207377 GCTTCGTCGTCCTTATCGCC 61.207 60.000 0.00 0.00 0.00 5.54
3282 8121 0.381089 CTTCGTCGTCCTTATCGCCT 59.619 55.000 0.00 0.00 0.00 5.52
3283 8122 0.379669 TTCGTCGTCCTTATCGCCTC 59.620 55.000 0.00 0.00 0.00 4.70
3284 8123 1.368969 CGTCGTCCTTATCGCCTCG 60.369 63.158 0.00 0.00 0.00 4.63
3285 8124 1.008767 GTCGTCCTTATCGCCTCGG 60.009 63.158 0.00 0.00 0.00 4.63
3286 8125 1.452651 TCGTCCTTATCGCCTCGGT 60.453 57.895 0.00 0.00 0.00 4.69
3287 8126 1.033746 TCGTCCTTATCGCCTCGGTT 61.034 55.000 0.00 0.00 0.00 4.44
3288 8127 0.594284 CGTCCTTATCGCCTCGGTTC 60.594 60.000 0.00 0.00 0.00 3.62
3289 8128 0.249363 GTCCTTATCGCCTCGGTTCC 60.249 60.000 0.00 0.00 0.00 3.62
3290 8129 1.069258 CCTTATCGCCTCGGTTCCC 59.931 63.158 0.00 0.00 0.00 3.97
3308 8147 3.635433 CGCAGGAATCAATGCCAAG 57.365 52.632 4.46 0.00 39.30 3.61
3309 8148 0.101759 CGCAGGAATCAATGCCAAGG 59.898 55.000 4.46 0.00 39.30 3.61
3310 8149 0.179092 GCAGGAATCAATGCCAAGGC 60.179 55.000 3.61 3.61 42.35 4.35
3311 8150 1.481871 CAGGAATCAATGCCAAGGCT 58.518 50.000 12.96 0.00 42.51 4.58
3312 8151 1.136305 CAGGAATCAATGCCAAGGCTG 59.864 52.381 12.96 3.28 42.51 4.85
3313 8152 1.188863 GGAATCAATGCCAAGGCTGT 58.811 50.000 12.96 0.00 42.51 4.40
3314 8153 1.135721 GGAATCAATGCCAAGGCTGTC 59.864 52.381 12.96 0.00 42.51 3.51
3315 8154 0.813184 AATCAATGCCAAGGCTGTCG 59.187 50.000 12.96 0.00 42.51 4.35
3316 8155 0.322816 ATCAATGCCAAGGCTGTCGT 60.323 50.000 12.96 0.00 42.51 4.34
3317 8156 1.210931 CAATGCCAAGGCTGTCGTG 59.789 57.895 12.96 0.00 42.51 4.35
3318 8157 2.629656 AATGCCAAGGCTGTCGTGC 61.630 57.895 12.96 0.00 42.51 5.34
3332 8171 4.101448 GTGCCGGTCAGCCTCCAT 62.101 66.667 1.90 0.00 0.00 3.41
3333 8172 3.329889 TGCCGGTCAGCCTCCATT 61.330 61.111 1.90 0.00 0.00 3.16
3334 8173 2.825836 GCCGGTCAGCCTCCATTG 60.826 66.667 1.90 0.00 0.00 2.82
3335 8174 2.989639 CCGGTCAGCCTCCATTGA 59.010 61.111 0.00 0.00 0.00 2.57
3336 8175 1.528824 CCGGTCAGCCTCCATTGAT 59.471 57.895 0.00 0.00 0.00 2.57
3337 8176 0.816825 CCGGTCAGCCTCCATTGATG 60.817 60.000 0.00 0.00 0.00 3.07
3338 8177 1.442526 CGGTCAGCCTCCATTGATGC 61.443 60.000 0.00 0.00 32.84 3.91
3339 8178 1.105759 GGTCAGCCTCCATTGATGCC 61.106 60.000 0.00 0.00 33.08 4.40
3340 8179 0.106819 GTCAGCCTCCATTGATGCCT 60.107 55.000 0.00 0.00 33.08 4.75
3341 8180 0.182061 TCAGCCTCCATTGATGCCTC 59.818 55.000 0.00 0.00 33.08 4.70
3342 8181 0.106868 CAGCCTCCATTGATGCCTCA 60.107 55.000 0.00 0.00 33.08 3.86
3343 8182 0.106819 AGCCTCCATTGATGCCTCAC 60.107 55.000 0.00 0.00 33.08 3.51
3344 8183 0.394762 GCCTCCATTGATGCCTCACA 60.395 55.000 0.00 0.00 0.00 3.58
3345 8184 1.676746 CCTCCATTGATGCCTCACAG 58.323 55.000 0.00 0.00 0.00 3.66
3346 8185 1.676746 CTCCATTGATGCCTCACAGG 58.323 55.000 0.00 0.00 38.80 4.00
3356 8195 4.007644 CTCACAGGCGGGCAGTGA 62.008 66.667 24.32 24.32 39.74 3.41
3357 8196 3.535629 CTCACAGGCGGGCAGTGAA 62.536 63.158 25.44 12.90 41.27 3.18
3358 8197 3.052082 CACAGGCGGGCAGTGAAG 61.052 66.667 20.08 0.00 35.33 3.02
3359 8198 4.335647 ACAGGCGGGCAGTGAAGG 62.336 66.667 3.78 0.00 0.00 3.46
3411 8250 4.758251 CGTCACCCGGCATGCAGA 62.758 66.667 21.36 5.99 0.00 4.26
3412 8251 2.124570 GTCACCCGGCATGCAGAT 60.125 61.111 21.36 4.28 0.00 2.90
3413 8252 1.750399 GTCACCCGGCATGCAGATT 60.750 57.895 21.36 2.47 0.00 2.40
3414 8253 1.451927 TCACCCGGCATGCAGATTC 60.452 57.895 21.36 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 9.791820 TTCATCAAATATCATGTCATCACAAAC 57.208 29.630 0.00 0.00 35.64 2.93
75 76 3.503800 AAAAGAACTGGTGGGAGTACC 57.496 47.619 0.00 0.00 41.24 3.34
87 88 9.614792 AATCTTATATGCGAGGTAAAAAGAACT 57.385 29.630 0.00 0.00 0.00 3.01
99 100 7.706281 ACTTCAGACAAATCTTATATGCGAG 57.294 36.000 0.00 0.00 30.42 5.03
100 101 9.594478 TTAACTTCAGACAAATCTTATATGCGA 57.406 29.630 0.00 0.00 30.42 5.10
387 393 2.917600 CCCTGGGGTCCTTTTTACTACT 59.082 50.000 4.27 0.00 0.00 2.57
388 394 2.914941 TCCCTGGGGTCCTTTTTACTAC 59.085 50.000 14.00 0.00 36.47 2.73
389 395 3.187112 CTCCCTGGGGTCCTTTTTACTA 58.813 50.000 14.00 0.00 36.47 1.82
445 943 8.738199 TTATAAAGACTACGACTGAGTTTGTG 57.262 34.615 0.00 0.00 0.00 3.33
447 945 9.408069 AGTTTATAAAGACTACGACTGAGTTTG 57.592 33.333 0.00 0.00 0.00 2.93
510 1008 7.201644 GCATCTGTACTATGTTTACATTGCTGT 60.202 37.037 0.02 0.00 36.49 4.40
518 1017 5.049405 GCCATGGCATCTGTACTATGTTTAC 60.049 44.000 32.08 0.00 41.49 2.01
547 1047 1.133025 CGCATGTCCACCCAAATTCTC 59.867 52.381 0.00 0.00 0.00 2.87
607 1146 2.061773 ACGAGAAGCAACGTTGATCAG 58.938 47.619 31.62 23.41 39.75 2.90
608 1147 2.148916 ACGAGAAGCAACGTTGATCA 57.851 45.000 31.62 0.00 39.75 2.92
771 1339 4.174762 GAGTTTAGCTAGCACAGTACCAC 58.825 47.826 18.83 1.88 0.00 4.16
777 1345 2.189342 GCTCGAGTTTAGCTAGCACAG 58.811 52.381 18.83 5.30 37.01 3.66
778 1346 1.544246 TGCTCGAGTTTAGCTAGCACA 59.456 47.619 18.83 0.42 40.73 4.57
779 1347 1.921230 GTGCTCGAGTTTAGCTAGCAC 59.079 52.381 18.83 17.17 46.28 4.40
780 1348 1.819288 AGTGCTCGAGTTTAGCTAGCA 59.181 47.619 18.83 0.95 40.73 3.49
782 1350 8.259049 ACTATATAGTGCTCGAGTTTAGCTAG 57.741 38.462 14.71 9.68 40.73 3.42
783 1351 8.095792 AGACTATATAGTGCTCGAGTTTAGCTA 58.904 37.037 20.13 9.59 40.73 3.32
784 1352 6.938030 AGACTATATAGTGCTCGAGTTTAGCT 59.062 38.462 20.13 3.43 40.73 3.32
785 1353 7.018826 CAGACTATATAGTGCTCGAGTTTAGC 58.981 42.308 20.13 0.00 40.50 3.09
786 1354 8.312896 TCAGACTATATAGTGCTCGAGTTTAG 57.687 38.462 20.13 5.27 36.50 1.85
788 1356 7.569639 TTCAGACTATATAGTGCTCGAGTTT 57.430 36.000 20.13 2.54 36.50 2.66
789 1357 7.569639 TTTCAGACTATATAGTGCTCGAGTT 57.430 36.000 20.13 2.91 36.50 3.01
792 1360 9.894783 GTATTTTTCAGACTATATAGTGCTCGA 57.105 33.333 20.13 12.49 36.50 4.04
805 1373 8.989980 GCAAGTTACTGTAGTATTTTTCAGACT 58.010 33.333 0.00 0.00 0.00 3.24
809 1377 8.020819 GCATGCAAGTTACTGTAGTATTTTTCA 58.979 33.333 14.21 0.00 0.00 2.69
810 1378 8.237267 AGCATGCAAGTTACTGTAGTATTTTTC 58.763 33.333 21.98 0.00 0.00 2.29
811 1379 8.110860 AGCATGCAAGTTACTGTAGTATTTTT 57.889 30.769 21.98 0.00 0.00 1.94
812 1380 7.687941 AGCATGCAAGTTACTGTAGTATTTT 57.312 32.000 21.98 0.00 0.00 1.82
813 1381 7.687941 AAGCATGCAAGTTACTGTAGTATTT 57.312 32.000 21.98 0.00 0.00 1.40
815 1383 8.964476 ATAAAGCATGCAAGTTACTGTAGTAT 57.036 30.769 21.98 0.00 0.00 2.12
816 1384 8.786826 AATAAAGCATGCAAGTTACTGTAGTA 57.213 30.769 21.98 0.00 0.00 1.82
817 1385 7.607991 AGAATAAAGCATGCAAGTTACTGTAGT 59.392 33.333 21.98 0.00 0.00 2.73
818 1386 7.978982 AGAATAAAGCATGCAAGTTACTGTAG 58.021 34.615 21.98 0.00 0.00 2.74
819 1387 7.921786 AGAATAAAGCATGCAAGTTACTGTA 57.078 32.000 21.98 0.00 0.00 2.74
820 1388 6.824305 AGAATAAAGCATGCAAGTTACTGT 57.176 33.333 21.98 0.91 0.00 3.55
821 1389 7.859377 CCATAGAATAAAGCATGCAAGTTACTG 59.141 37.037 21.98 6.57 0.00 2.74
822 1390 7.557719 ACCATAGAATAAAGCATGCAAGTTACT 59.442 33.333 21.98 13.95 0.00 2.24
823 1391 7.707104 ACCATAGAATAAAGCATGCAAGTTAC 58.293 34.615 21.98 7.11 0.00 2.50
824 1392 7.555914 TGACCATAGAATAAAGCATGCAAGTTA 59.444 33.333 21.98 14.84 0.00 2.24
825 1393 6.377996 TGACCATAGAATAAAGCATGCAAGTT 59.622 34.615 21.98 13.07 0.00 2.66
827 1395 6.381481 TGACCATAGAATAAAGCATGCAAG 57.619 37.500 21.98 0.00 0.00 4.01
828 1396 6.772360 TTGACCATAGAATAAAGCATGCAA 57.228 33.333 21.98 5.05 0.00 4.08
829 1397 6.377996 ACTTTGACCATAGAATAAAGCATGCA 59.622 34.615 21.98 0.00 32.97 3.96
830 1398 6.694411 CACTTTGACCATAGAATAAAGCATGC 59.306 38.462 10.51 10.51 32.97 4.06
831 1399 6.694411 GCACTTTGACCATAGAATAAAGCATG 59.306 38.462 0.00 0.00 32.97 4.06
832 1400 6.377996 TGCACTTTGACCATAGAATAAAGCAT 59.622 34.615 0.00 0.00 32.97 3.79
833 1401 5.709631 TGCACTTTGACCATAGAATAAAGCA 59.290 36.000 0.00 0.00 32.97 3.91
834 1402 6.194796 TGCACTTTGACCATAGAATAAAGC 57.805 37.500 0.00 0.00 32.97 3.51
835 1403 7.029563 GGTTGCACTTTGACCATAGAATAAAG 58.970 38.462 0.00 0.00 35.18 1.85
838 1406 4.947388 GGGTTGCACTTTGACCATAGAATA 59.053 41.667 6.83 0.00 35.11 1.75
839 1407 3.763897 GGGTTGCACTTTGACCATAGAAT 59.236 43.478 6.83 0.00 35.11 2.40
840 1408 3.153919 GGGTTGCACTTTGACCATAGAA 58.846 45.455 6.83 0.00 35.11 2.10
841 1409 2.554344 GGGGTTGCACTTTGACCATAGA 60.554 50.000 6.83 0.00 35.11 1.98
842 1410 1.818674 GGGGTTGCACTTTGACCATAG 59.181 52.381 6.83 0.00 35.11 2.23
843 1411 1.884497 CGGGGTTGCACTTTGACCATA 60.884 52.381 6.83 0.00 35.11 2.74
845 1413 1.826054 CGGGGTTGCACTTTGACCA 60.826 57.895 6.83 0.00 35.11 4.02
846 1414 2.561037 CCGGGGTTGCACTTTGACC 61.561 63.158 0.00 0.00 0.00 4.02
847 1415 1.792118 GACCGGGGTTGCACTTTGAC 61.792 60.000 6.32 0.00 0.00 3.18
848 1416 1.527380 GACCGGGGTTGCACTTTGA 60.527 57.895 6.32 0.00 0.00 2.69
849 1417 1.795170 CTGACCGGGGTTGCACTTTG 61.795 60.000 6.32 0.00 0.00 2.77
850 1418 1.528309 CTGACCGGGGTTGCACTTT 60.528 57.895 6.32 0.00 0.00 2.66
853 1421 2.358737 CTCTGACCGGGGTTGCAC 60.359 66.667 6.32 0.00 0.00 4.57
854 1422 1.701031 TTTCTCTGACCGGGGTTGCA 61.701 55.000 6.32 0.00 0.00 4.08
855 1423 0.322546 ATTTCTCTGACCGGGGTTGC 60.323 55.000 6.32 0.00 0.00 4.17
856 1424 2.236395 AGTATTTCTCTGACCGGGGTTG 59.764 50.000 6.32 0.00 0.00 3.77
857 1425 2.547990 AGTATTTCTCTGACCGGGGTT 58.452 47.619 6.32 0.00 0.00 4.11
858 1426 2.249309 AGTATTTCTCTGACCGGGGT 57.751 50.000 6.32 0.00 0.00 4.95
859 1427 3.068307 CAGTAGTATTTCTCTGACCGGGG 59.932 52.174 6.32 0.00 0.00 5.73
860 1428 3.700038 ACAGTAGTATTTCTCTGACCGGG 59.300 47.826 6.32 0.00 0.00 5.73
862 1430 6.680874 ACTACAGTAGTATTTCTCTGACCG 57.319 41.667 11.84 0.00 37.23 4.79
863 1431 8.735692 AGTACTACAGTAGTATTTCTCTGACC 57.264 38.462 21.07 6.64 42.68 4.02
872 1440 9.917887 ACCATCAAGTAGTACTACAGTAGTATT 57.082 33.333 29.87 19.08 42.68 1.89
875 1443 6.538021 CGACCATCAAGTAGTACTACAGTAGT 59.462 42.308 29.87 17.51 42.68 2.73
876 1444 6.538021 ACGACCATCAAGTAGTACTACAGTAG 59.462 42.308 29.87 18.90 38.48 2.57
879 1447 5.814764 ACGACCATCAAGTAGTACTACAG 57.185 43.478 29.87 22.30 38.48 2.74
881 1449 5.105997 ACCAACGACCATCAAGTAGTACTAC 60.106 44.000 23.03 23.03 36.35 2.73
894 5165 0.887387 CGGAAACCACCAACGACCAT 60.887 55.000 0.00 0.00 0.00 3.55
950 5222 2.227194 GAAGACGGAAACCACCAACAT 58.773 47.619 0.00 0.00 0.00 2.71
1026 5350 4.214327 GGCGGAGAGGAAGAGCCG 62.214 72.222 0.00 0.00 46.14 5.52
1155 5479 2.970324 GTGAAGGTTCGTGCCGCA 60.970 61.111 0.00 0.00 0.00 5.69
1190 5514 0.832135 TCTGAAGTTCCTGGTCGCCT 60.832 55.000 0.00 0.00 0.00 5.52
1278 5602 0.761187 TTAGCTAGCTGGCCAGGATG 59.239 55.000 33.46 10.38 0.00 3.51
1287 5616 5.609423 AGTGAAGAATGGATTAGCTAGCTG 58.391 41.667 27.68 0.00 0.00 4.24
1354 5863 2.954611 CTCAGCGTCAGGACACGA 59.045 61.111 0.00 0.00 42.69 4.35
1376 5885 3.053291 GACATTCGGGTGGCGCAA 61.053 61.111 10.83 0.00 0.00 4.85
1543 6056 5.924254 TGGTTAGTTAATCAACACAGACTCG 59.076 40.000 4.99 0.00 37.10 4.18
1566 6079 1.280982 CACAAGATCGATCCGGTGTG 58.719 55.000 26.76 26.76 32.20 3.82
1567 6080 0.460284 GCACAAGATCGATCCGGTGT 60.460 55.000 31.20 24.80 35.23 4.16
1789 6303 2.709213 AGCTCTTGATTTCCTCTGCAC 58.291 47.619 0.00 0.00 0.00 4.57
1800 6314 1.354040 CTTCGCGTGAAGCTCTTGAT 58.646 50.000 24.43 0.00 44.70 2.57
1801 6315 2.814410 CTTCGCGTGAAGCTCTTGA 58.186 52.632 24.43 0.00 44.70 3.02
1970 6503 5.526479 GCTTGGCTATAGTTAACTTACCCAC 59.474 44.000 14.49 1.57 0.00 4.61
2030 6575 3.427909 GCAAAGATCAATCATTCACGGCA 60.428 43.478 0.00 0.00 0.00 5.69
2045 6594 2.022754 GCCTGATCCAGCAGCAAAGAT 61.023 52.381 0.00 0.00 34.56 2.40
2046 6595 0.679002 GCCTGATCCAGCAGCAAAGA 60.679 55.000 0.00 0.00 34.56 2.52
2047 6596 1.807886 GCCTGATCCAGCAGCAAAG 59.192 57.895 0.00 0.00 34.56 2.77
2048 6597 2.042259 CGCCTGATCCAGCAGCAAA 61.042 57.895 0.00 0.00 34.56 3.68
2055 6604 1.226802 CTCGTGTCGCCTGATCCAG 60.227 63.158 0.00 0.00 0.00 3.86
2073 6622 0.615331 TGGCTCCTGTCCTTCATCAC 59.385 55.000 0.00 0.00 0.00 3.06
2094 6643 2.187946 GTCTGCCATCCACCGGAG 59.812 66.667 9.46 0.00 34.05 4.63
2159 6711 1.985473 TGCACATGGAAGCAACTTCT 58.015 45.000 7.20 0.00 40.07 2.85
2257 6809 2.026915 TGGTGTGATGATTCAGGTGGAG 60.027 50.000 0.00 0.00 30.85 3.86
2360 6923 5.351189 CGACAATCACAACCATATCAAGTCA 59.649 40.000 0.00 0.00 0.00 3.41
2361 6924 5.727791 GCGACAATCACAACCATATCAAGTC 60.728 44.000 0.00 0.00 0.00 3.01
2362 6925 4.094887 GCGACAATCACAACCATATCAAGT 59.905 41.667 0.00 0.00 0.00 3.16
2369 6936 1.068333 GCAAGCGACAATCACAACCAT 60.068 47.619 0.00 0.00 0.00 3.55
2413 7000 2.110578 GGGCCAATGAACAGCCTAAAT 58.889 47.619 4.39 0.00 46.31 1.40
2444 7065 7.385478 CCTCTAGAACCAAGTCAACTTCTAAAC 59.615 40.741 0.00 0.00 33.11 2.01
2499 7141 6.156519 GTGTATATCAGCATGTATCGGTTCA 58.843 40.000 0.00 0.00 37.40 3.18
2500 7142 5.577164 GGTGTATATCAGCATGTATCGGTTC 59.423 44.000 0.00 0.00 43.22 3.62
2501 7143 5.246203 AGGTGTATATCAGCATGTATCGGTT 59.754 40.000 0.00 0.00 45.77 4.44
2502 7144 4.772624 AGGTGTATATCAGCATGTATCGGT 59.227 41.667 0.00 0.00 45.77 4.69
2503 7145 5.105063 CAGGTGTATATCAGCATGTATCGG 58.895 45.833 0.00 0.00 45.77 4.18
2504 7146 5.954335 TCAGGTGTATATCAGCATGTATCG 58.046 41.667 0.00 0.00 45.77 2.92
2505 7147 7.277319 CACATCAGGTGTATATCAGCATGTATC 59.723 40.741 0.00 0.00 45.77 2.24
2506 7148 7.101700 CACATCAGGTGTATATCAGCATGTAT 58.898 38.462 0.00 0.00 45.77 2.29
2507 7149 6.458210 CACATCAGGTGTATATCAGCATGTA 58.542 40.000 0.00 0.00 45.77 2.29
2508 7150 5.303165 CACATCAGGTGTATATCAGCATGT 58.697 41.667 0.00 6.09 45.77 3.21
2509 7151 5.857822 CACATCAGGTGTATATCAGCATG 57.142 43.478 0.00 0.00 45.77 4.06
2522 7164 1.131883 GAGTACGTACGCACATCAGGT 59.868 52.381 22.40 0.62 0.00 4.00
2523 7165 1.533338 GGAGTACGTACGCACATCAGG 60.533 57.143 27.07 0.00 0.00 3.86
2525 7167 0.452987 GGGAGTACGTACGCACATCA 59.547 55.000 27.07 0.00 29.32 3.07
2526 7168 0.737219 AGGGAGTACGTACGCACATC 59.263 55.000 29.43 16.80 31.41 3.06
2527 7169 0.737219 GAGGGAGTACGTACGCACAT 59.263 55.000 29.43 17.02 31.41 3.21
2529 7171 1.431036 GGAGGGAGTACGTACGCAC 59.569 63.158 27.07 24.85 0.00 5.34
2530 7172 2.108514 CGGAGGGAGTACGTACGCA 61.109 63.158 27.07 0.00 34.17 5.24
2531 7173 2.041366 GACGGAGGGAGTACGTACGC 62.041 65.000 19.72 19.72 44.88 4.42
2532 7174 1.432270 GGACGGAGGGAGTACGTACG 61.432 65.000 19.49 15.01 46.37 3.67
2535 7177 2.437359 CGGACGGAGGGAGTACGT 60.437 66.667 0.00 0.00 40.75 3.57
2536 7178 1.308069 TTTCGGACGGAGGGAGTACG 61.308 60.000 0.00 0.00 46.50 3.67
2537 7179 1.109609 ATTTCGGACGGAGGGAGTAC 58.890 55.000 0.00 0.00 0.00 2.73
2539 7181 1.856629 TAATTTCGGACGGAGGGAGT 58.143 50.000 0.00 0.00 0.00 3.85
2540 7182 2.973694 TTAATTTCGGACGGAGGGAG 57.026 50.000 0.00 0.00 0.00 4.30
2542 7184 3.275999 ACAATTAATTTCGGACGGAGGG 58.724 45.455 0.00 0.00 0.00 4.30
2543 7185 3.000925 CGACAATTAATTTCGGACGGAGG 59.999 47.826 17.59 1.05 0.00 4.30
2546 7188 4.799949 TCTACGACAATTAATTTCGGACGG 59.200 41.667 23.81 13.07 37.07 4.79
2547 7189 5.937165 TCTACGACAATTAATTTCGGACG 57.063 39.130 23.81 16.47 37.07 4.79
2548 7190 7.638683 CCATTTCTACGACAATTAATTTCGGAC 59.361 37.037 23.81 6.92 37.07 4.79
2550 7192 7.690228 TCCATTTCTACGACAATTAATTTCGG 58.310 34.615 23.81 14.26 37.07 4.30
2594 7416 8.138712 GTCTCGAAAATGGATGTATCTAGAACT 58.861 37.037 0.00 0.00 0.00 3.01
2596 7418 8.007405 TGTCTCGAAAATGGATGTATCTAGAA 57.993 34.615 0.00 0.00 0.00 2.10
2599 7421 7.782049 ACTTGTCTCGAAAATGGATGTATCTA 58.218 34.615 0.00 0.00 0.00 1.98
2601 7423 6.910536 ACTTGTCTCGAAAATGGATGTATC 57.089 37.500 0.00 0.00 0.00 2.24
2602 7424 8.964476 ATTACTTGTCTCGAAAATGGATGTAT 57.036 30.769 0.00 0.00 0.00 2.29
2604 7426 7.687941 AATTACTTGTCTCGAAAATGGATGT 57.312 32.000 0.00 0.00 0.00 3.06
2605 7427 7.426456 CGAAATTACTTGTCTCGAAAATGGATG 59.574 37.037 0.00 0.00 0.00 3.51
2607 7429 6.647481 TCGAAATTACTTGTCTCGAAAATGGA 59.353 34.615 0.00 0.00 35.74 3.41
2608 7430 6.827641 TCGAAATTACTTGTCTCGAAAATGG 58.172 36.000 0.00 0.00 35.74 3.16
2609 7431 7.005330 CGTTCGAAATTACTTGTCTCGAAAATG 59.995 37.037 9.69 1.94 46.49 2.32
2610 7432 7.007697 CGTTCGAAATTACTTGTCTCGAAAAT 58.992 34.615 9.69 0.00 46.49 1.82
2614 7436 3.916172 CCGTTCGAAATTACTTGTCTCGA 59.084 43.478 0.00 0.00 36.80 4.04
2615 7437 3.916172 TCCGTTCGAAATTACTTGTCTCG 59.084 43.478 0.00 0.00 0.00 4.04
2616 7438 5.575606 TCATCCGTTCGAAATTACTTGTCTC 59.424 40.000 0.00 0.00 0.00 3.36
2617 7439 5.475719 TCATCCGTTCGAAATTACTTGTCT 58.524 37.500 0.00 0.00 0.00 3.41
2618 7440 5.773239 TCATCCGTTCGAAATTACTTGTC 57.227 39.130 0.00 0.00 0.00 3.18
2619 7441 5.699458 ACTTCATCCGTTCGAAATTACTTGT 59.301 36.000 0.00 0.00 0.00 3.16
2620 7442 6.165659 ACTTCATCCGTTCGAAATTACTTG 57.834 37.500 0.00 0.00 0.00 3.16
2627 7466 5.231702 TGAATGTACTTCATCCGTTCGAAA 58.768 37.500 0.00 0.00 38.97 3.46
2628 7467 4.811908 TGAATGTACTTCATCCGTTCGAA 58.188 39.130 0.00 0.00 38.97 3.71
2629 7468 4.443913 TGAATGTACTTCATCCGTTCGA 57.556 40.909 0.00 0.00 38.97 3.71
2639 7478 2.939103 AGCAGCCGAATGAATGTACTTC 59.061 45.455 0.00 0.00 0.00 3.01
2645 7484 0.384309 ATGCAGCAGCCGAATGAATG 59.616 50.000 0.00 0.00 41.13 2.67
2647 7486 1.804598 CATGCAGCAGCCGAATGAA 59.195 52.632 0.00 0.00 41.13 2.57
2648 7487 2.767445 GCATGCAGCAGCCGAATGA 61.767 57.895 14.21 0.00 44.79 2.57
2649 7488 2.278596 GCATGCAGCAGCCGAATG 60.279 61.111 14.21 0.00 44.79 2.67
2658 7497 3.128349 CCCTTAAATCATTGCATGCAGC 58.872 45.455 21.50 0.00 45.96 5.25
2659 7498 4.395959 ACCCTTAAATCATTGCATGCAG 57.604 40.909 21.50 10.69 0.00 4.41
2661 7500 4.268405 CGAAACCCTTAAATCATTGCATGC 59.732 41.667 11.82 11.82 0.00 4.06
2662 7501 4.805192 CCGAAACCCTTAAATCATTGCATG 59.195 41.667 0.00 0.00 0.00 4.06
2667 7506 4.340617 TGAGCCGAAACCCTTAAATCATT 58.659 39.130 0.00 0.00 0.00 2.57
2668 7507 3.963129 TGAGCCGAAACCCTTAAATCAT 58.037 40.909 0.00 0.00 0.00 2.45
2669 7508 3.426787 TGAGCCGAAACCCTTAAATCA 57.573 42.857 0.00 0.00 0.00 2.57
2670 7509 3.128764 CCTTGAGCCGAAACCCTTAAATC 59.871 47.826 0.00 0.00 0.00 2.17
2671 7510 3.089284 CCTTGAGCCGAAACCCTTAAAT 58.911 45.455 0.00 0.00 0.00 1.40
2672 7511 2.510613 CCTTGAGCCGAAACCCTTAAA 58.489 47.619 0.00 0.00 0.00 1.52
2673 7512 1.884928 GCCTTGAGCCGAAACCCTTAA 60.885 52.381 0.00 0.00 34.35 1.85
2674 7513 0.322187 GCCTTGAGCCGAAACCCTTA 60.322 55.000 0.00 0.00 34.35 2.69
2675 7514 1.603739 GCCTTGAGCCGAAACCCTT 60.604 57.895 0.00 0.00 34.35 3.95
2676 7515 2.034221 GCCTTGAGCCGAAACCCT 59.966 61.111 0.00 0.00 34.35 4.34
2678 7517 1.172812 ACAAGCCTTGAGCCGAAACC 61.173 55.000 12.25 0.00 45.47 3.27
2680 7519 1.172180 CCACAAGCCTTGAGCCGAAA 61.172 55.000 12.25 0.00 45.47 3.46
2681 7520 1.600636 CCACAAGCCTTGAGCCGAA 60.601 57.895 12.25 0.00 45.47 4.30
2682 7521 2.032528 CCACAAGCCTTGAGCCGA 59.967 61.111 12.25 0.00 45.47 5.54
2683 7522 2.032528 TCCACAAGCCTTGAGCCG 59.967 61.111 12.25 0.00 45.47 5.52
2685 7524 0.595095 CAACTCCACAAGCCTTGAGC 59.405 55.000 12.25 0.00 44.25 4.26
2686 7525 1.605710 CACAACTCCACAAGCCTTGAG 59.394 52.381 12.25 2.73 0.00 3.02
2687 7526 1.679139 CACAACTCCACAAGCCTTGA 58.321 50.000 12.25 0.00 0.00 3.02
2688 7527 0.670162 CCACAACTCCACAAGCCTTG 59.330 55.000 2.11 2.11 0.00 3.61
2689 7528 0.258774 ACCACAACTCCACAAGCCTT 59.741 50.000 0.00 0.00 0.00 4.35
2690 7529 0.466189 CACCACAACTCCACAAGCCT 60.466 55.000 0.00 0.00 0.00 4.58
2691 7530 1.455383 CCACCACAACTCCACAAGCC 61.455 60.000 0.00 0.00 0.00 4.35
2692 7531 0.465460 TCCACCACAACTCCACAAGC 60.465 55.000 0.00 0.00 0.00 4.01
2693 7532 2.051334 TTCCACCACAACTCCACAAG 57.949 50.000 0.00 0.00 0.00 3.16
2696 7535 2.293399 GACATTTCCACCACAACTCCAC 59.707 50.000 0.00 0.00 0.00 4.02
2697 7536 2.582052 GACATTTCCACCACAACTCCA 58.418 47.619 0.00 0.00 0.00 3.86
2698 7537 1.886542 GGACATTTCCACCACAACTCC 59.113 52.381 0.00 0.00 42.30 3.85
2699 7538 1.886542 GGGACATTTCCACCACAACTC 59.113 52.381 0.00 0.00 44.98 3.01
2700 7539 1.499007 AGGGACATTTCCACCACAACT 59.501 47.619 0.00 0.00 44.98 3.16
2701 7540 1.613437 CAGGGACATTTCCACCACAAC 59.387 52.381 0.00 0.00 44.98 3.32
2702 7541 1.216678 ACAGGGACATTTCCACCACAA 59.783 47.619 0.00 0.00 44.98 3.33
2704 7543 1.202879 TCACAGGGACATTTCCACCAC 60.203 52.381 0.00 0.00 44.98 4.16
2706 7545 2.094675 CATCACAGGGACATTTCCACC 58.905 52.381 0.00 0.00 44.98 4.61
2707 7546 1.474077 GCATCACAGGGACATTTCCAC 59.526 52.381 0.00 0.00 44.98 4.02
2708 7547 1.616725 GGCATCACAGGGACATTTCCA 60.617 52.381 0.00 0.00 44.98 3.53
2709 7548 1.106285 GGCATCACAGGGACATTTCC 58.894 55.000 0.00 0.00 41.95 3.13
2710 7549 1.747355 CAGGCATCACAGGGACATTTC 59.253 52.381 0.00 0.00 0.00 2.17
2712 7551 0.700564 ACAGGCATCACAGGGACATT 59.299 50.000 0.00 0.00 0.00 2.71
2713 7552 0.034767 CACAGGCATCACAGGGACAT 60.035 55.000 0.00 0.00 0.00 3.06
2715 7554 2.042831 GCACAGGCATCACAGGGAC 61.043 63.158 0.00 0.00 40.72 4.46
2716 7555 1.782201 AAGCACAGGCATCACAGGGA 61.782 55.000 0.00 0.00 44.61 4.20
2718 7557 0.607217 TGAAGCACAGGCATCACAGG 60.607 55.000 0.00 0.00 42.31 4.00
2719 7558 0.803117 CTGAAGCACAGGCATCACAG 59.197 55.000 3.48 0.00 42.31 3.66
2720 7559 1.239296 GCTGAAGCACAGGCATCACA 61.239 55.000 11.72 0.00 42.31 3.58
2727 7566 3.114616 CGTCGGCTGAAGCACAGG 61.115 66.667 0.00 0.00 45.82 4.00
2729 7568 2.108157 AACGTCGGCTGAAGCACA 59.892 55.556 8.51 0.00 44.36 4.57
2730 7569 2.159272 GACAACGTCGGCTGAAGCAC 62.159 60.000 8.51 0.00 44.36 4.40
2731 7570 1.954146 GACAACGTCGGCTGAAGCA 60.954 57.895 8.51 0.00 44.36 3.91
2732 7571 2.853914 GACAACGTCGGCTGAAGC 59.146 61.111 8.51 0.00 41.14 3.86
2743 7582 3.421826 GCTCAACACTCATAACGACAACG 60.422 47.826 0.00 0.00 45.75 4.10
2744 7583 3.741344 AGCTCAACACTCATAACGACAAC 59.259 43.478 0.00 0.00 0.00 3.32
2746 7585 3.660501 AGCTCAACACTCATAACGACA 57.339 42.857 0.00 0.00 0.00 4.35
2747 7586 5.399858 TCTAAGCTCAACACTCATAACGAC 58.600 41.667 0.00 0.00 0.00 4.34
2748 7587 5.638596 TCTAAGCTCAACACTCATAACGA 57.361 39.130 0.00 0.00 0.00 3.85
2749 7588 4.266502 GCTCTAAGCTCAACACTCATAACG 59.733 45.833 0.00 0.00 38.45 3.18
2751 7590 5.405935 TGCTCTAAGCTCAACACTCATAA 57.594 39.130 0.11 0.00 42.97 1.90
2752 7591 5.362143 AGATGCTCTAAGCTCAACACTCATA 59.638 40.000 0.11 0.00 42.97 2.15
2753 7592 3.969287 TGCTCTAAGCTCAACACTCAT 57.031 42.857 0.11 0.00 42.97 2.90
2755 7594 4.122143 AGATGCTCTAAGCTCAACACTC 57.878 45.455 0.11 0.00 42.97 3.51
2756 7595 4.020751 TGAAGATGCTCTAAGCTCAACACT 60.021 41.667 0.11 0.00 42.97 3.55
2757 7596 4.248859 TGAAGATGCTCTAAGCTCAACAC 58.751 43.478 0.11 0.00 42.97 3.32
2759 7598 3.309410 GCTGAAGATGCTCTAAGCTCAAC 59.691 47.826 0.11 0.00 42.97 3.18
2760 7599 3.529533 GCTGAAGATGCTCTAAGCTCAA 58.470 45.455 0.11 0.00 42.97 3.02
2764 7603 1.216122 CGGCTGAAGATGCTCTAAGC 58.784 55.000 0.00 10.03 42.82 3.09
2765 7604 2.200067 CACGGCTGAAGATGCTCTAAG 58.800 52.381 0.00 0.00 0.00 2.18
2766 7605 1.740380 GCACGGCTGAAGATGCTCTAA 60.740 52.381 0.00 0.00 35.16 2.10
2768 7607 1.449246 GCACGGCTGAAGATGCTCT 60.449 57.895 0.00 0.00 35.16 4.09
2769 7608 2.467826 GGCACGGCTGAAGATGCTC 61.468 63.158 0.00 0.00 38.18 4.26
2770 7609 2.437359 GGCACGGCTGAAGATGCT 60.437 61.111 0.00 0.00 38.18 3.79
2771 7610 3.512516 GGGCACGGCTGAAGATGC 61.513 66.667 0.00 0.00 37.35 3.91
2772 7611 2.825836 GGGGCACGGCTGAAGATG 60.826 66.667 0.00 0.00 0.00 2.90
3104 7943 1.303091 GCGACTGGGCCGTTTATTGT 61.303 55.000 0.00 0.00 0.00 2.71
3105 7944 1.427819 GCGACTGGGCCGTTTATTG 59.572 57.895 0.00 0.00 0.00 1.90
3106 7945 2.104253 CGCGACTGGGCCGTTTATT 61.104 57.895 0.00 0.00 0.00 1.40
3107 7946 2.510691 CGCGACTGGGCCGTTTAT 60.511 61.111 0.00 0.00 0.00 1.40
3115 7954 3.589654 TTCTGAAGGCGCGACTGGG 62.590 63.158 19.28 9.27 0.00 4.45
3116 7955 2.048222 TTCTGAAGGCGCGACTGG 60.048 61.111 19.28 9.70 0.00 4.00
3117 7956 1.347817 GACTTCTGAAGGCGCGACTG 61.348 60.000 19.28 2.24 0.00 3.51
3118 7957 1.080434 GACTTCTGAAGGCGCGACT 60.080 57.895 9.84 9.84 0.00 4.18
3119 7958 2.095252 GGACTTCTGAAGGCGCGAC 61.095 63.158 20.61 7.34 37.42 5.19
3120 7959 2.261671 GGACTTCTGAAGGCGCGA 59.738 61.111 20.61 0.00 37.42 5.87
3121 7960 3.181967 CGGACTTCTGAAGGCGCG 61.182 66.667 20.61 18.09 37.42 6.86
3122 7961 1.228657 AAACGGACTTCTGAAGGCGC 61.229 55.000 20.61 11.15 37.42 6.53
3123 7962 1.226746 AAAACGGACTTCTGAAGGCG 58.773 50.000 20.61 15.73 37.42 5.52
3124 7963 2.349532 CGAAAAACGGACTTCTGAAGGC 60.350 50.000 20.61 18.02 38.46 4.35
3125 7964 3.521524 CGAAAAACGGACTTCTGAAGG 57.478 47.619 20.61 6.50 38.46 3.46
3138 7977 1.082561 GCCCGAACCGACGAAAAAC 60.083 57.895 0.00 0.00 35.09 2.43
3139 7978 2.253051 GGCCCGAACCGACGAAAAA 61.253 57.895 0.00 0.00 35.09 1.94
3140 7979 2.665854 GGCCCGAACCGACGAAAA 60.666 61.111 0.00 0.00 35.09 2.29
3148 7987 2.882132 CCAATTTCGGCCCGAACC 59.118 61.111 19.96 0.00 45.64 3.62
3149 7988 2.180769 GCCAATTTCGGCCCGAAC 59.819 61.111 19.96 2.46 45.64 3.95
3174 8013 4.410400 CAGGGTTCGGCCTGGGTC 62.410 72.222 0.00 0.00 37.43 4.46
3176 8015 4.722700 CACAGGGTTCGGCCTGGG 62.723 72.222 0.00 0.00 38.26 4.45
3196 8035 3.012722 TTTACCCGGCTCCCCCAG 61.013 66.667 0.00 0.00 0.00 4.45
3197 8036 3.332385 GTTTACCCGGCTCCCCCA 61.332 66.667 0.00 0.00 0.00 4.96
3198 8037 4.119363 GGTTTACCCGGCTCCCCC 62.119 72.222 0.00 0.00 0.00 5.40
3207 8046 1.401800 CGCACCAAAATCGGTTTACCC 60.402 52.381 0.00 0.00 37.07 3.69
3208 8047 1.536331 TCGCACCAAAATCGGTTTACC 59.464 47.619 0.00 0.00 37.07 2.85
3209 8048 2.973419 TCGCACCAAAATCGGTTTAC 57.027 45.000 0.00 0.00 37.07 2.01
3210 8049 2.349627 CGTTCGCACCAAAATCGGTTTA 60.350 45.455 0.00 0.00 37.07 2.01
3211 8050 1.598430 CGTTCGCACCAAAATCGGTTT 60.598 47.619 0.00 0.00 37.07 3.27
3212 8051 0.040781 CGTTCGCACCAAAATCGGTT 60.041 50.000 0.00 0.00 37.07 4.44
3213 8052 1.572447 CGTTCGCACCAAAATCGGT 59.428 52.632 0.00 0.00 41.07 4.69
3214 8053 1.154301 CCGTTCGCACCAAAATCGG 60.154 57.895 0.00 0.00 0.00 4.18
3215 8054 1.154301 CCCGTTCGCACCAAAATCG 60.154 57.895 0.00 0.00 0.00 3.34
3216 8055 0.594110 TTCCCGTTCGCACCAAAATC 59.406 50.000 0.00 0.00 0.00 2.17
3217 8056 1.067915 CATTCCCGTTCGCACCAAAAT 60.068 47.619 0.00 0.00 0.00 1.82
3218 8057 0.312416 CATTCCCGTTCGCACCAAAA 59.688 50.000 0.00 0.00 0.00 2.44
3219 8058 1.519751 CCATTCCCGTTCGCACCAAA 61.520 55.000 0.00 0.00 0.00 3.28
3220 8059 1.969064 CCATTCCCGTTCGCACCAA 60.969 57.895 0.00 0.00 0.00 3.67
3221 8060 2.359354 CCATTCCCGTTCGCACCA 60.359 61.111 0.00 0.00 0.00 4.17
3222 8061 3.131478 CCCATTCCCGTTCGCACC 61.131 66.667 0.00 0.00 0.00 5.01
3223 8062 3.810896 GCCCATTCCCGTTCGCAC 61.811 66.667 0.00 0.00 0.00 5.34
3231 8070 4.506255 CTCGGTGGGCCCATTCCC 62.506 72.222 31.45 23.90 46.73 3.97
3232 8071 3.699134 GACTCGGTGGGCCCATTCC 62.699 68.421 31.45 24.71 0.00 3.01
3233 8072 2.124695 GACTCGGTGGGCCCATTC 60.125 66.667 31.45 22.13 0.00 2.67
3234 8073 2.933287 TGACTCGGTGGGCCCATT 60.933 61.111 31.45 10.34 0.00 3.16
3235 8074 3.402681 CTGACTCGGTGGGCCCAT 61.403 66.667 31.45 12.22 0.00 4.00
3240 8079 3.680786 TGTCGCTGACTCGGTGGG 61.681 66.667 9.49 0.00 33.15 4.61
3241 8080 2.430921 GTGTCGCTGACTCGGTGG 60.431 66.667 9.49 0.00 33.15 4.61
3242 8081 2.801162 CGTGTCGCTGACTCGGTG 60.801 66.667 18.57 0.00 43.01 4.94
3259 8098 1.207377 GATAAGGACGACGAAGCGGC 61.207 60.000 0.00 0.00 38.96 6.53
3260 8099 0.928908 CGATAAGGACGACGAAGCGG 60.929 60.000 0.00 0.00 35.12 5.52
3261 8100 1.529883 GCGATAAGGACGACGAAGCG 61.530 60.000 0.00 0.00 37.29 4.68
3262 8101 1.207377 GGCGATAAGGACGACGAAGC 61.207 60.000 0.00 0.00 0.00 3.86
3263 8102 0.381089 AGGCGATAAGGACGACGAAG 59.619 55.000 0.00 0.00 44.04 3.79
3264 8103 0.379669 GAGGCGATAAGGACGACGAA 59.620 55.000 0.00 0.00 44.04 3.85
3265 8104 1.769098 CGAGGCGATAAGGACGACGA 61.769 60.000 0.00 0.00 44.04 4.20
3266 8105 1.368969 CGAGGCGATAAGGACGACG 60.369 63.158 0.00 0.00 44.04 5.12
3267 8106 1.008767 CCGAGGCGATAAGGACGAC 60.009 63.158 0.00 0.00 39.24 4.34
3268 8107 1.033746 AACCGAGGCGATAAGGACGA 61.034 55.000 0.00 0.00 0.00 4.20
3269 8108 0.594284 GAACCGAGGCGATAAGGACG 60.594 60.000 0.00 0.00 0.00 4.79
3270 8109 0.249363 GGAACCGAGGCGATAAGGAC 60.249 60.000 0.00 0.00 0.00 3.85
3271 8110 1.397390 GGGAACCGAGGCGATAAGGA 61.397 60.000 0.00 0.00 40.86 3.36
3272 8111 1.069258 GGGAACCGAGGCGATAAGG 59.931 63.158 0.00 0.00 40.86 2.69
3273 8112 4.752514 GGGAACCGAGGCGATAAG 57.247 61.111 0.00 0.00 40.86 1.73
3287 8126 1.453745 GGCATTGATTCCTGCGGGA 60.454 57.895 11.27 11.27 39.30 5.14
3288 8127 1.321805 TTGGCATTGATTCCTGCGGG 61.322 55.000 4.71 4.71 39.30 6.13
3289 8128 0.101759 CTTGGCATTGATTCCTGCGG 59.898 55.000 0.00 0.00 39.30 5.69
3290 8129 0.101759 CCTTGGCATTGATTCCTGCG 59.898 55.000 0.00 0.00 39.30 5.18
3291 8130 0.179092 GCCTTGGCATTGATTCCTGC 60.179 55.000 6.79 0.86 37.66 4.85
3292 8131 1.136305 CAGCCTTGGCATTGATTCCTG 59.864 52.381 14.54 0.00 0.00 3.86
3293 8132 1.272872 ACAGCCTTGGCATTGATTCCT 60.273 47.619 14.54 0.00 0.00 3.36
3294 8133 1.135721 GACAGCCTTGGCATTGATTCC 59.864 52.381 14.54 0.00 30.39 3.01
3295 8134 1.202222 CGACAGCCTTGGCATTGATTC 60.202 52.381 14.54 0.00 30.39 2.52
3296 8135 0.813184 CGACAGCCTTGGCATTGATT 59.187 50.000 14.54 0.00 30.39 2.57
3297 8136 0.322816 ACGACAGCCTTGGCATTGAT 60.323 50.000 14.54 0.00 30.39 2.57
3298 8137 1.073025 ACGACAGCCTTGGCATTGA 59.927 52.632 14.54 0.00 30.39 2.57
3299 8138 1.210931 CACGACAGCCTTGGCATTG 59.789 57.895 14.54 6.87 30.39 2.82
3300 8139 2.629656 GCACGACAGCCTTGGCATT 61.630 57.895 14.54 0.00 30.39 3.56
3301 8140 3.058160 GCACGACAGCCTTGGCAT 61.058 61.111 14.54 1.06 30.39 4.40
3315 8154 3.628646 AATGGAGGCTGACCGGCAC 62.629 63.158 0.00 0.00 42.76 5.01
3316 8155 3.329889 AATGGAGGCTGACCGGCA 61.330 61.111 0.00 0.00 42.76 5.69
3317 8156 2.615227 ATCAATGGAGGCTGACCGGC 62.615 60.000 0.00 0.00 42.76 6.13
3318 8157 0.816825 CATCAATGGAGGCTGACCGG 60.817 60.000 0.00 0.00 42.76 5.28
3319 8158 1.442526 GCATCAATGGAGGCTGACCG 61.443 60.000 0.00 0.00 46.80 4.79
3320 8159 2.412605 GCATCAATGGAGGCTGACC 58.587 57.895 0.00 0.00 46.80 4.02
3326 8165 1.676746 CTGTGAGGCATCAATGGAGG 58.323 55.000 0.92 0.00 37.14 4.30
3327 8166 1.676746 CCTGTGAGGCATCAATGGAG 58.323 55.000 13.58 3.64 37.14 3.86
3328 8167 3.888424 CCTGTGAGGCATCAATGGA 57.112 52.632 13.58 0.00 37.14 3.41
3339 8178 4.007644 TCACTGCCCGCCTGTGAG 62.008 66.667 8.06 0.00 44.36 3.51
3340 8179 3.535629 CTTCACTGCCCGCCTGTGA 62.536 63.158 8.06 8.06 46.54 3.58
3341 8180 3.052082 CTTCACTGCCCGCCTGTG 61.052 66.667 4.25 4.25 42.72 3.66
3342 8181 4.335647 CCTTCACTGCCCGCCTGT 62.336 66.667 0.00 0.00 0.00 4.00
3394 8233 4.758251 TCTGCATGCCGGGTGACG 62.758 66.667 16.68 0.00 43.80 4.35
3395 8234 1.718757 GAATCTGCATGCCGGGTGAC 61.719 60.000 16.68 0.00 0.00 3.67
3396 8235 1.451927 GAATCTGCATGCCGGGTGA 60.452 57.895 16.68 6.09 0.00 4.02
3397 8236 3.113745 GAATCTGCATGCCGGGTG 58.886 61.111 16.68 0.30 0.00 4.61



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.