Multiple sequence alignment - TraesCS1B01G374600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G374600 chr1B 100.000 3703 0 0 1 3703 605010302 605014004 0.000000e+00 6839.0
1 TraesCS1B01G374600 chr1B 95.699 93 4 0 1 93 629157120 629157028 2.300000e-32 150.0
2 TraesCS1B01G374600 chr1B 93.478 92 6 0 1 92 129178953 129179044 1.790000e-28 137.0
3 TraesCS1B01G374600 chr1D 91.533 1748 76 32 2006 3703 444864823 444866548 0.000000e+00 2342.0
4 TraesCS1B01G374600 chr1D 91.154 1673 72 33 338 1980 444863131 444864757 0.000000e+00 2200.0
5 TraesCS1B01G374600 chr1D 92.308 208 15 1 3057 3264 444869606 444869812 1.010000e-75 294.0
6 TraesCS1B01G374600 chr1D 89.143 175 18 1 3385 3558 444878642 444878816 2.240000e-52 217.0
7 TraesCS1B01G374600 chr1D 92.793 111 8 0 3593 3703 444879004 444879114 1.060000e-35 161.0
8 TraesCS1B01G374600 chr1D 96.875 32 1 0 3027 3058 415647677 415647646 2.000000e-03 54.7
9 TraesCS1B01G374600 chr1A 89.852 1015 51 21 2093 3058 540153724 540154735 0.000000e+00 1256.0
10 TraesCS1B01G374600 chr1A 87.132 645 27 22 763 1399 540152183 540152779 0.000000e+00 680.0
11 TraesCS1B01G374600 chr1A 89.247 558 41 9 3057 3609 540154767 540155310 0.000000e+00 680.0
12 TraesCS1B01G374600 chr1A 89.602 452 35 8 1531 1980 540152927 540153368 6.940000e-157 564.0
13 TraesCS1B01G374600 chr1A 92.982 114 8 0 3590 3703 540155320 540155433 2.290000e-37 167.0
14 TraesCS1B01G374600 chr1A 81.818 154 13 4 2006 2145 540153428 540153580 8.400000e-22 115.0
15 TraesCS1B01G374600 chr5B 96.774 93 3 0 1 93 74445555 74445463 4.950000e-34 156.0
16 TraesCS1B01G374600 chr5B 93.548 93 6 0 1 93 502459732 502459824 4.990000e-29 139.0
17 TraesCS1B01G374600 chr6B 95.699 93 4 0 1 93 493327030 493327122 2.300000e-32 150.0
18 TraesCS1B01G374600 chr4A 95.699 93 4 0 1 93 734248752 734248844 2.300000e-32 150.0
19 TraesCS1B01G374600 chr3B 93.548 93 6 0 1 93 587971477 587971385 4.990000e-29 139.0
20 TraesCS1B01G374600 chr7D 92.308 91 7 0 3 93 508341677 508341767 3.000000e-26 130.0
21 TraesCS1B01G374600 chr7D 94.444 36 0 2 3027 3061 111408113 111408147 2.000000e-03 54.7
22 TraesCS1B01G374600 chr7B 92.308 91 7 0 3 93 728941490 728941400 3.000000e-26 130.0
23 TraesCS1B01G374600 chr7B 96.875 32 1 0 3028 3059 620460809 620460778 2.000000e-03 54.7
24 TraesCS1B01G374600 chr7B 96.875 32 0 1 3030 3061 407704416 407704386 7.000000e-03 52.8
25 TraesCS1B01G374600 chr4D 97.143 35 0 1 3025 3058 388122798 388122832 1.440000e-04 58.4
26 TraesCS1B01G374600 chr4D 90.476 42 1 3 3031 3072 371630941 371630979 7.000000e-03 52.8
27 TraesCS1B01G374600 chr2B 100.000 30 0 0 3029 3058 74831586 74831557 5.170000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G374600 chr1B 605010302 605014004 3702 False 6839 6839 100.000000 1 3703 1 chr1B.!!$F2 3702
1 TraesCS1B01G374600 chr1D 444863131 444869812 6681 False 1612 2342 91.665000 338 3703 3 chr1D.!!$F1 3365
2 TraesCS1B01G374600 chr1A 540152183 540155433 3250 False 577 1256 88.438833 763 3703 6 chr1A.!!$F1 2940

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
127 128 0.032952 TGGACGCACCACTTACAGTC 59.967 55.0 0.00 0.0 44.64 3.51 F
129 130 0.039798 GACGCACCACTTACAGTCGA 60.040 55.0 0.00 0.0 0.00 4.20 F
167 168 0.169672 CTCGCCTCAGCAACCAAATG 59.830 55.0 0.00 0.0 39.83 2.32 F
173 174 0.179004 TCAGCAACCAAATGGACGGT 60.179 50.0 6.42 0.0 38.94 4.83 F
240 241 0.179234 TTCACAGTTGGACGAGGCAA 59.821 50.0 0.00 0.0 0.00 4.52 F
1280 1322 0.320374 TGGGTAGGTTCAAGACGCAG 59.680 55.0 0.00 0.0 32.84 5.18 F
2317 2661 0.104855 TGTCGTGCTCTGCAGTTTCT 59.895 50.0 14.67 0.0 40.08 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1791 1876 1.003355 TACAGCAAGACAGGGCAGC 60.003 57.895 0.0 0.0 0.00 5.25 R
1991 2076 1.967319 ACGCATCACCAAGTGTTCTT 58.033 45.000 0.0 0.0 34.79 2.52 R
1997 2082 2.113860 AAGCATACGCATCACCAAGT 57.886 45.000 0.0 0.0 42.27 3.16 R
2000 2085 2.682155 TGTAAGCATACGCATCACCA 57.318 45.000 0.0 0.0 42.27 4.17 R
2186 2521 1.177401 GGAATTGCTTGGGGTCTGAC 58.823 55.000 0.0 0.0 0.00 3.51 R
2672 3051 0.173708 ATCCGCTCGTCTGTTCTTCC 59.826 55.000 0.0 0.0 0.00 3.46 R
3197 3633 0.247814 GTTGATGCGTCGCTGGAATG 60.248 55.000 19.5 0.0 0.00 2.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 3.223589 AAAAAGCGCGGCAACCCT 61.224 55.556 8.83 0.00 0.00 4.34
30 31 2.791868 AAAAAGCGCGGCAACCCTT 61.792 52.632 8.83 0.00 0.00 3.95
31 32 1.457009 AAAAAGCGCGGCAACCCTTA 61.457 50.000 8.83 0.00 0.00 2.69
32 33 1.248101 AAAAGCGCGGCAACCCTTAT 61.248 50.000 8.83 0.00 0.00 1.73
33 34 1.654023 AAAGCGCGGCAACCCTTATC 61.654 55.000 8.83 0.00 0.00 1.75
34 35 3.583086 GCGCGGCAACCCTTATCC 61.583 66.667 8.83 0.00 0.00 2.59
35 36 2.124901 CGCGGCAACCCTTATCCA 60.125 61.111 0.00 0.00 0.00 3.41
36 37 2.469516 CGCGGCAACCCTTATCCAC 61.470 63.158 0.00 0.00 0.00 4.02
37 38 1.077716 GCGGCAACCCTTATCCACT 60.078 57.895 0.00 0.00 0.00 4.00
38 39 0.679960 GCGGCAACCCTTATCCACTT 60.680 55.000 0.00 0.00 0.00 3.16
39 40 1.094785 CGGCAACCCTTATCCACTTG 58.905 55.000 0.00 0.00 0.00 3.16
40 41 1.613255 CGGCAACCCTTATCCACTTGT 60.613 52.381 0.00 0.00 0.00 3.16
41 42 2.525368 GGCAACCCTTATCCACTTGTT 58.475 47.619 0.00 0.00 0.00 2.83
42 43 2.492088 GGCAACCCTTATCCACTTGTTC 59.508 50.000 0.00 0.00 0.00 3.18
43 44 2.492088 GCAACCCTTATCCACTTGTTCC 59.508 50.000 0.00 0.00 0.00 3.62
44 45 3.761897 CAACCCTTATCCACTTGTTCCA 58.238 45.455 0.00 0.00 0.00 3.53
45 46 3.721087 ACCCTTATCCACTTGTTCCAG 57.279 47.619 0.00 0.00 0.00 3.86
46 47 2.308866 ACCCTTATCCACTTGTTCCAGG 59.691 50.000 0.00 0.00 0.00 4.45
47 48 2.357154 CCCTTATCCACTTGTTCCAGGG 60.357 54.545 0.00 0.00 33.98 4.45
48 49 2.369394 CTTATCCACTTGTTCCAGGGC 58.631 52.381 0.00 0.00 0.00 5.19
49 50 0.623723 TATCCACTTGTTCCAGGGCC 59.376 55.000 0.00 0.00 0.00 5.80
50 51 2.155197 ATCCACTTGTTCCAGGGCCC 62.155 60.000 16.46 16.46 0.00 5.80
51 52 2.520458 CACTTGTTCCAGGGCCCA 59.480 61.111 27.56 0.00 0.00 5.36
52 53 1.903404 CACTTGTTCCAGGGCCCAC 60.903 63.158 27.56 14.43 0.00 4.61
53 54 2.084930 ACTTGTTCCAGGGCCCACT 61.085 57.895 27.56 0.00 0.00 4.00
54 55 1.153756 CTTGTTCCAGGGCCCACTT 59.846 57.895 27.56 0.00 0.00 3.16
55 56 0.469892 CTTGTTCCAGGGCCCACTTT 60.470 55.000 27.56 0.00 0.00 2.66
56 57 0.758685 TTGTTCCAGGGCCCACTTTG 60.759 55.000 27.56 13.78 0.00 2.77
57 58 1.152830 GTTCCAGGGCCCACTTTGA 59.847 57.895 27.56 9.69 0.00 2.69
58 59 1.152830 TTCCAGGGCCCACTTTGAC 59.847 57.895 27.56 0.00 0.00 3.18
59 60 2.672996 CCAGGGCCCACTTTGACG 60.673 66.667 27.56 0.00 0.00 4.35
60 61 3.365265 CAGGGCCCACTTTGACGC 61.365 66.667 27.56 0.00 0.00 5.19
61 62 4.660938 AGGGCCCACTTTGACGCC 62.661 66.667 27.56 0.00 40.85 5.68
62 63 4.660938 GGGCCCACTTTGACGCCT 62.661 66.667 19.95 0.00 41.35 5.52
63 64 3.056328 GGCCCACTTTGACGCCTC 61.056 66.667 0.00 0.00 38.41 4.70
64 65 2.281484 GCCCACTTTGACGCCTCA 60.281 61.111 0.00 0.00 0.00 3.86
65 66 2.328099 GCCCACTTTGACGCCTCAG 61.328 63.158 0.00 0.00 0.00 3.35
66 67 2.328099 CCCACTTTGACGCCTCAGC 61.328 63.158 0.00 0.00 0.00 4.26
67 68 1.597854 CCACTTTGACGCCTCAGCA 60.598 57.895 0.00 0.00 39.83 4.41
68 69 1.165907 CCACTTTGACGCCTCAGCAA 61.166 55.000 0.00 0.00 39.83 3.91
69 70 0.040958 CACTTTGACGCCTCAGCAAC 60.041 55.000 0.00 0.00 39.83 4.17
70 71 1.166531 ACTTTGACGCCTCAGCAACC 61.167 55.000 0.00 0.00 39.83 3.77
71 72 1.153066 TTTGACGCCTCAGCAACCA 60.153 52.632 0.00 0.00 39.83 3.67
72 73 0.537143 TTTGACGCCTCAGCAACCAT 60.537 50.000 0.00 0.00 39.83 3.55
73 74 1.236616 TTGACGCCTCAGCAACCATG 61.237 55.000 0.00 0.00 39.83 3.66
74 75 1.375908 GACGCCTCAGCAACCATGA 60.376 57.895 0.00 0.00 39.83 3.07
75 76 1.364626 GACGCCTCAGCAACCATGAG 61.365 60.000 0.00 0.00 43.15 2.90
86 87 3.266964 CCATGAGGTGGTGCGTTG 58.733 61.111 0.00 0.00 43.44 4.10
87 88 2.334946 CCATGAGGTGGTGCGTTGG 61.335 63.158 0.00 0.00 43.44 3.77
88 89 2.672996 ATGAGGTGGTGCGTTGGC 60.673 61.111 0.00 0.00 40.52 4.52
89 90 4.947147 TGAGGTGGTGCGTTGGCC 62.947 66.667 0.00 0.00 38.85 5.36
90 91 4.643387 GAGGTGGTGCGTTGGCCT 62.643 66.667 3.32 0.00 38.85 5.19
91 92 4.643387 AGGTGGTGCGTTGGCCTC 62.643 66.667 3.32 0.00 38.85 4.70
94 95 4.980805 TGGTGCGTTGGCCTCGTC 62.981 66.667 18.60 12.79 38.85 4.20
96 97 4.980805 GTGCGTTGGCCTCGTCCA 62.981 66.667 18.60 9.09 38.85 4.02
97 98 4.243008 TGCGTTGGCCTCGTCCAA 62.243 61.111 18.60 3.19 43.36 3.53
101 102 3.557220 TTGGCCTCGTCCAACAGA 58.443 55.556 3.32 0.00 40.92 3.41
102 103 2.066340 TTGGCCTCGTCCAACAGAT 58.934 52.632 3.32 0.00 40.92 2.90
103 104 0.321564 TTGGCCTCGTCCAACAGATG 60.322 55.000 3.32 0.00 40.92 2.90
114 115 2.549633 CAACAGATGGATTTGGACGC 57.450 50.000 0.00 0.00 0.00 5.19
115 116 1.811965 CAACAGATGGATTTGGACGCA 59.188 47.619 0.00 0.00 0.00 5.24
116 117 1.453155 ACAGATGGATTTGGACGCAC 58.547 50.000 0.00 0.00 0.00 5.34
117 118 0.734889 CAGATGGATTTGGACGCACC 59.265 55.000 0.00 0.00 39.54 5.01
126 127 2.129620 TGGACGCACCACTTACAGT 58.870 52.632 0.00 0.00 44.64 3.55
127 128 0.032952 TGGACGCACCACTTACAGTC 59.967 55.000 0.00 0.00 44.64 3.51
128 129 1.007336 GGACGCACCACTTACAGTCG 61.007 60.000 0.00 0.00 38.79 4.18
129 130 0.039798 GACGCACCACTTACAGTCGA 60.040 55.000 0.00 0.00 0.00 4.20
130 131 0.386476 ACGCACCACTTACAGTCGAA 59.614 50.000 0.00 0.00 0.00 3.71
131 132 1.202440 ACGCACCACTTACAGTCGAAA 60.202 47.619 0.00 0.00 0.00 3.46
132 133 1.455786 CGCACCACTTACAGTCGAAAG 59.544 52.381 0.00 0.00 0.00 2.62
133 134 2.750948 GCACCACTTACAGTCGAAAGA 58.249 47.619 1.68 0.00 38.16 2.52
134 135 3.128349 GCACCACTTACAGTCGAAAGAA 58.872 45.455 1.68 0.00 45.01 2.52
135 136 3.558418 GCACCACTTACAGTCGAAAGAAA 59.442 43.478 1.68 0.00 45.01 2.52
136 137 4.034742 GCACCACTTACAGTCGAAAGAAAA 59.965 41.667 1.68 0.00 45.01 2.29
137 138 5.499047 CACCACTTACAGTCGAAAGAAAAC 58.501 41.667 1.68 0.00 45.01 2.43
138 139 5.293569 CACCACTTACAGTCGAAAGAAAACT 59.706 40.000 1.68 0.00 45.01 2.66
139 140 6.477688 CACCACTTACAGTCGAAAGAAAACTA 59.522 38.462 1.68 0.00 45.01 2.24
140 141 7.010738 CACCACTTACAGTCGAAAGAAAACTAA 59.989 37.037 1.68 0.00 45.01 2.24
141 142 7.010830 ACCACTTACAGTCGAAAGAAAACTAAC 59.989 37.037 1.68 0.00 45.01 2.34
142 143 7.010738 CCACTTACAGTCGAAAGAAAACTAACA 59.989 37.037 1.68 0.00 45.01 2.41
143 144 8.548721 CACTTACAGTCGAAAGAAAACTAACAT 58.451 33.333 1.68 0.00 45.01 2.71
144 145 9.106070 ACTTACAGTCGAAAGAAAACTAACATT 57.894 29.630 1.68 0.00 45.01 2.71
147 148 7.573627 ACAGTCGAAAGAAAACTAACATTAGC 58.426 34.615 0.00 0.00 45.01 3.09
148 149 7.015877 CAGTCGAAAGAAAACTAACATTAGCC 58.984 38.462 0.00 0.00 45.01 3.93
149 150 6.935208 AGTCGAAAGAAAACTAACATTAGCCT 59.065 34.615 0.00 0.00 45.01 4.58
150 151 7.117956 AGTCGAAAGAAAACTAACATTAGCCTC 59.882 37.037 0.00 0.00 45.01 4.70
151 152 6.090358 TCGAAAGAAAACTAACATTAGCCTCG 59.910 38.462 0.00 0.00 37.03 4.63
152 153 5.547181 AAGAAAACTAACATTAGCCTCGC 57.453 39.130 0.00 0.00 34.09 5.03
153 154 3.939592 AGAAAACTAACATTAGCCTCGCC 59.060 43.478 0.00 0.00 34.09 5.54
154 155 3.629142 AAACTAACATTAGCCTCGCCT 57.371 42.857 0.00 0.00 34.09 5.52
155 156 2.892784 ACTAACATTAGCCTCGCCTC 57.107 50.000 0.00 0.00 34.09 4.70
156 157 2.108168 ACTAACATTAGCCTCGCCTCA 58.892 47.619 0.00 0.00 34.09 3.86
157 158 2.101582 ACTAACATTAGCCTCGCCTCAG 59.898 50.000 0.00 0.00 34.09 3.35
158 159 0.462759 AACATTAGCCTCGCCTCAGC 60.463 55.000 0.00 0.00 0.00 4.26
159 160 1.144716 CATTAGCCTCGCCTCAGCA 59.855 57.895 0.00 0.00 39.83 4.41
160 161 0.462581 CATTAGCCTCGCCTCAGCAA 60.463 55.000 0.00 0.00 39.83 3.91
161 162 0.462759 ATTAGCCTCGCCTCAGCAAC 60.463 55.000 0.00 0.00 39.83 4.17
162 163 2.521958 TTAGCCTCGCCTCAGCAACC 62.522 60.000 0.00 0.00 39.83 3.77
163 164 4.704833 GCCTCGCCTCAGCAACCA 62.705 66.667 0.00 0.00 39.83 3.67
164 165 2.032528 CCTCGCCTCAGCAACCAA 59.967 61.111 0.00 0.00 39.83 3.67
165 166 1.600636 CCTCGCCTCAGCAACCAAA 60.601 57.895 0.00 0.00 39.83 3.28
166 167 0.962356 CCTCGCCTCAGCAACCAAAT 60.962 55.000 0.00 0.00 39.83 2.32
167 168 0.169672 CTCGCCTCAGCAACCAAATG 59.830 55.000 0.00 0.00 39.83 2.32
168 169 1.213537 CGCCTCAGCAACCAAATGG 59.786 57.895 0.00 0.00 39.83 3.16
169 170 1.243342 CGCCTCAGCAACCAAATGGA 61.243 55.000 6.42 0.00 39.83 3.41
170 171 0.244721 GCCTCAGCAACCAAATGGAC 59.755 55.000 6.42 0.00 39.53 4.02
171 172 0.523072 CCTCAGCAACCAAATGGACG 59.477 55.000 6.42 0.00 38.94 4.79
172 173 0.523072 CTCAGCAACCAAATGGACGG 59.477 55.000 6.42 0.00 38.94 4.79
173 174 0.179004 TCAGCAACCAAATGGACGGT 60.179 50.000 6.42 0.00 38.94 4.83
174 175 1.072489 TCAGCAACCAAATGGACGGTA 59.928 47.619 6.42 0.00 38.94 4.02
175 176 1.883275 CAGCAACCAAATGGACGGTAA 59.117 47.619 6.42 0.00 38.94 2.85
176 177 2.095263 CAGCAACCAAATGGACGGTAAG 60.095 50.000 6.42 0.00 38.94 2.34
177 178 2.156098 GCAACCAAATGGACGGTAAGA 58.844 47.619 6.42 0.00 38.94 2.10
178 179 2.554893 GCAACCAAATGGACGGTAAGAA 59.445 45.455 6.42 0.00 38.94 2.52
179 180 3.610821 GCAACCAAATGGACGGTAAGAAC 60.611 47.826 6.42 0.00 38.94 3.01
180 181 2.419667 ACCAAATGGACGGTAAGAACG 58.580 47.619 6.42 0.00 38.94 3.95
182 183 2.158841 CCAAATGGACGGTAAGAACGTG 59.841 50.000 0.00 0.00 45.68 4.49
187 188 1.494824 GACGGTAAGAACGTGCAACT 58.505 50.000 0.00 0.00 45.68 3.16
188 189 1.454653 GACGGTAAGAACGTGCAACTC 59.545 52.381 0.00 0.00 45.68 3.01
189 190 1.202440 ACGGTAAGAACGTGCAACTCA 60.202 47.619 0.00 0.00 43.78 3.41
190 191 1.191647 CGGTAAGAACGTGCAACTCAC 59.808 52.381 0.00 0.00 42.23 3.51
191 192 1.529865 GGTAAGAACGTGCAACTCACC 59.470 52.381 0.00 0.00 42.69 4.02
192 193 1.191647 GTAAGAACGTGCAACTCACCG 59.808 52.381 0.00 0.00 42.69 4.94
193 194 0.461339 AAGAACGTGCAACTCACCGT 60.461 50.000 0.00 0.00 42.69 4.83
194 195 0.874607 AGAACGTGCAACTCACCGTC 60.875 55.000 0.00 0.00 42.69 4.79
195 196 1.828331 GAACGTGCAACTCACCGTCC 61.828 60.000 0.00 0.00 42.69 4.79
196 197 2.029073 CGTGCAACTCACCGTCCT 59.971 61.111 0.00 0.00 42.69 3.85
197 198 2.022129 CGTGCAACTCACCGTCCTC 61.022 63.158 0.00 0.00 42.69 3.71
198 199 1.668151 GTGCAACTCACCGTCCTCC 60.668 63.158 0.00 0.00 39.79 4.30
199 200 2.047179 GCAACTCACCGTCCTCCC 60.047 66.667 0.00 0.00 0.00 4.30
200 201 2.879233 GCAACTCACCGTCCTCCCA 61.879 63.158 0.00 0.00 0.00 4.37
201 202 1.293498 CAACTCACCGTCCTCCCAG 59.707 63.158 0.00 0.00 0.00 4.45
202 203 1.152312 AACTCACCGTCCTCCCAGT 60.152 57.895 0.00 0.00 0.00 4.00
203 204 0.763223 AACTCACCGTCCTCCCAGTT 60.763 55.000 0.00 0.00 0.00 3.16
204 205 0.763223 ACTCACCGTCCTCCCAGTTT 60.763 55.000 0.00 0.00 0.00 2.66
205 206 0.396811 CTCACCGTCCTCCCAGTTTT 59.603 55.000 0.00 0.00 0.00 2.43
206 207 0.841289 TCACCGTCCTCCCAGTTTTT 59.159 50.000 0.00 0.00 0.00 1.94
207 208 0.951558 CACCGTCCTCCCAGTTTTTG 59.048 55.000 0.00 0.00 0.00 2.44
218 219 2.704572 CCAGTTTTTGGGTTTGTTGCA 58.295 42.857 0.00 0.00 43.75 4.08
219 220 3.277715 CCAGTTTTTGGGTTTGTTGCAT 58.722 40.909 0.00 0.00 43.75 3.96
220 221 4.446371 CCAGTTTTTGGGTTTGTTGCATA 58.554 39.130 0.00 0.00 43.75 3.14
221 222 5.062528 CCAGTTTTTGGGTTTGTTGCATAT 58.937 37.500 0.00 0.00 43.75 1.78
222 223 5.530543 CCAGTTTTTGGGTTTGTTGCATATT 59.469 36.000 0.00 0.00 43.75 1.28
223 224 6.293353 CCAGTTTTTGGGTTTGTTGCATATTC 60.293 38.462 0.00 0.00 43.75 1.75
224 225 6.259608 CAGTTTTTGGGTTTGTTGCATATTCA 59.740 34.615 0.00 0.00 0.00 2.57
225 226 6.259829 AGTTTTTGGGTTTGTTGCATATTCAC 59.740 34.615 0.00 0.00 0.00 3.18
226 227 4.944619 TTGGGTTTGTTGCATATTCACA 57.055 36.364 0.00 0.00 0.00 3.58
227 228 4.517952 TGGGTTTGTTGCATATTCACAG 57.482 40.909 0.00 0.00 0.00 3.66
228 229 3.894427 TGGGTTTGTTGCATATTCACAGT 59.106 39.130 0.00 0.00 0.00 3.55
229 230 4.343526 TGGGTTTGTTGCATATTCACAGTT 59.656 37.500 0.00 0.00 0.00 3.16
230 231 4.685628 GGGTTTGTTGCATATTCACAGTTG 59.314 41.667 0.00 0.00 0.00 3.16
231 232 4.685628 GGTTTGTTGCATATTCACAGTTGG 59.314 41.667 0.00 0.00 0.00 3.77
232 233 5.508825 GGTTTGTTGCATATTCACAGTTGGA 60.509 40.000 0.00 0.00 0.00 3.53
233 234 4.764679 TGTTGCATATTCACAGTTGGAC 57.235 40.909 0.00 0.00 0.00 4.02
234 235 3.188254 TGTTGCATATTCACAGTTGGACG 59.812 43.478 0.00 0.00 0.00 4.79
235 236 3.326836 TGCATATTCACAGTTGGACGA 57.673 42.857 0.00 0.00 0.00 4.20
236 237 3.261580 TGCATATTCACAGTTGGACGAG 58.738 45.455 0.00 0.00 0.00 4.18
237 238 2.609459 GCATATTCACAGTTGGACGAGG 59.391 50.000 0.00 0.00 0.00 4.63
238 239 2.380084 TATTCACAGTTGGACGAGGC 57.620 50.000 0.00 0.00 0.00 4.70
239 240 0.396435 ATTCACAGTTGGACGAGGCA 59.604 50.000 0.00 0.00 0.00 4.75
240 241 0.179234 TTCACAGTTGGACGAGGCAA 59.821 50.000 0.00 0.00 0.00 4.52
241 242 0.179234 TCACAGTTGGACGAGGCAAA 59.821 50.000 0.00 0.00 0.00 3.68
242 243 1.021202 CACAGTTGGACGAGGCAAAA 58.979 50.000 0.00 0.00 0.00 2.44
243 244 1.002468 CACAGTTGGACGAGGCAAAAG 60.002 52.381 0.00 0.00 0.00 2.27
244 245 1.308998 CAGTTGGACGAGGCAAAAGT 58.691 50.000 0.00 0.00 0.00 2.66
245 246 1.676006 CAGTTGGACGAGGCAAAAGTT 59.324 47.619 0.00 0.00 0.00 2.66
246 247 2.875933 CAGTTGGACGAGGCAAAAGTTA 59.124 45.455 0.00 0.00 0.00 2.24
247 248 3.314080 CAGTTGGACGAGGCAAAAGTTAA 59.686 43.478 0.00 0.00 0.00 2.01
248 249 3.314357 AGTTGGACGAGGCAAAAGTTAAC 59.686 43.478 0.00 0.00 0.00 2.01
249 250 2.920524 TGGACGAGGCAAAAGTTAACA 58.079 42.857 8.61 0.00 0.00 2.41
250 251 2.875933 TGGACGAGGCAAAAGTTAACAG 59.124 45.455 8.61 0.00 0.00 3.16
251 252 3.135994 GGACGAGGCAAAAGTTAACAGA 58.864 45.455 8.61 0.00 0.00 3.41
252 253 3.751698 GGACGAGGCAAAAGTTAACAGAT 59.248 43.478 8.61 0.00 0.00 2.90
253 254 4.215613 GGACGAGGCAAAAGTTAACAGATT 59.784 41.667 8.61 0.00 0.00 2.40
254 255 5.358298 ACGAGGCAAAAGTTAACAGATTC 57.642 39.130 8.61 0.00 0.00 2.52
255 256 4.819630 ACGAGGCAAAAGTTAACAGATTCA 59.180 37.500 8.61 0.00 0.00 2.57
256 257 5.147162 CGAGGCAAAAGTTAACAGATTCAC 58.853 41.667 8.61 0.00 0.00 3.18
257 258 5.277779 CGAGGCAAAAGTTAACAGATTCACA 60.278 40.000 8.61 0.00 0.00 3.58
258 259 6.568462 CGAGGCAAAAGTTAACAGATTCACAT 60.568 38.462 8.61 0.00 0.00 3.21
259 260 6.449698 AGGCAAAAGTTAACAGATTCACATG 58.550 36.000 8.61 0.00 0.00 3.21
260 261 6.265196 AGGCAAAAGTTAACAGATTCACATGA 59.735 34.615 8.61 0.00 0.00 3.07
261 262 6.363357 GGCAAAAGTTAACAGATTCACATGAC 59.637 38.462 8.61 0.00 0.00 3.06
262 263 7.141363 GCAAAAGTTAACAGATTCACATGACT 58.859 34.615 8.61 0.00 0.00 3.41
263 264 7.113965 GCAAAAGTTAACAGATTCACATGACTG 59.886 37.037 8.61 3.65 36.58 3.51
264 265 7.807977 AAAGTTAACAGATTCACATGACTGT 57.192 32.000 8.61 4.27 43.92 3.55
266 267 7.807977 AGTTAACAGATTCACATGACTGTTT 57.192 32.000 17.87 3.86 46.69 2.83
267 268 8.902540 AGTTAACAGATTCACATGACTGTTTA 57.097 30.769 17.87 10.05 46.69 2.01
268 269 8.993121 AGTTAACAGATTCACATGACTGTTTAG 58.007 33.333 17.87 3.05 46.69 1.85
269 270 6.808008 AACAGATTCACATGACTGTTTAGG 57.192 37.500 10.52 0.00 46.69 2.69
270 271 5.248640 ACAGATTCACATGACTGTTTAGGG 58.751 41.667 0.00 0.00 40.03 3.53
271 272 5.013079 ACAGATTCACATGACTGTTTAGGGA 59.987 40.000 0.00 0.00 40.03 4.20
272 273 5.352569 CAGATTCACATGACTGTTTAGGGAC 59.647 44.000 0.00 0.00 31.62 4.46
273 274 3.695830 TCACATGACTGTTTAGGGACC 57.304 47.619 0.00 0.00 31.62 4.46
274 275 2.976185 TCACATGACTGTTTAGGGACCA 59.024 45.455 0.00 0.00 31.62 4.02
275 276 3.007940 TCACATGACTGTTTAGGGACCAG 59.992 47.826 0.00 0.00 31.62 4.00
276 277 3.007940 CACATGACTGTTTAGGGACCAGA 59.992 47.826 0.00 0.00 31.62 3.86
277 278 3.008049 ACATGACTGTTTAGGGACCAGAC 59.992 47.826 0.00 0.00 28.70 3.51
278 279 2.684943 TGACTGTTTAGGGACCAGACA 58.315 47.619 0.00 0.00 0.00 3.41
279 280 3.042682 TGACTGTTTAGGGACCAGACAA 58.957 45.455 0.00 0.00 30.19 3.18
280 281 3.456644 TGACTGTTTAGGGACCAGACAAA 59.543 43.478 0.00 0.00 30.19 2.83
281 282 4.080243 TGACTGTTTAGGGACCAGACAAAA 60.080 41.667 0.00 0.00 30.19 2.44
282 283 5.061721 ACTGTTTAGGGACCAGACAAAAT 57.938 39.130 0.00 0.00 0.00 1.82
283 284 5.454966 ACTGTTTAGGGACCAGACAAAATT 58.545 37.500 0.00 0.00 0.00 1.82
284 285 5.535030 ACTGTTTAGGGACCAGACAAAATTC 59.465 40.000 0.00 0.00 0.00 2.17
285 286 4.517453 TGTTTAGGGACCAGACAAAATTCG 59.483 41.667 0.00 0.00 0.00 3.34
286 287 2.951229 AGGGACCAGACAAAATTCGT 57.049 45.000 0.00 0.00 0.00 3.85
287 288 5.486735 TTAGGGACCAGACAAAATTCGTA 57.513 39.130 0.00 0.00 0.00 3.43
288 289 3.671716 AGGGACCAGACAAAATTCGTAC 58.328 45.455 0.00 0.00 0.00 3.67
289 290 2.414138 GGGACCAGACAAAATTCGTACG 59.586 50.000 9.53 9.53 0.00 3.67
290 291 3.319755 GGACCAGACAAAATTCGTACGA 58.680 45.455 15.28 15.28 0.00 3.43
291 292 3.742369 GGACCAGACAAAATTCGTACGAA 59.258 43.478 30.85 30.85 38.59 3.85
292 293 4.376717 GGACCAGACAAAATTCGTACGAAC 60.377 45.833 31.29 17.82 36.91 3.95
293 294 4.374399 ACCAGACAAAATTCGTACGAACT 58.626 39.130 31.29 19.91 36.91 3.01
294 295 4.446719 ACCAGACAAAATTCGTACGAACTC 59.553 41.667 31.29 19.17 36.91 3.01
295 296 4.684703 CCAGACAAAATTCGTACGAACTCT 59.315 41.667 31.29 20.78 36.91 3.24
296 297 5.164080 CCAGACAAAATTCGTACGAACTCTC 60.164 44.000 31.29 19.78 36.91 3.20
297 298 4.922103 AGACAAAATTCGTACGAACTCTCC 59.078 41.667 31.29 18.29 36.91 3.71
298 299 3.992427 ACAAAATTCGTACGAACTCTCCC 59.008 43.478 31.29 0.00 36.91 4.30
299 300 4.243270 CAAAATTCGTACGAACTCTCCCT 58.757 43.478 31.29 12.29 36.91 4.20
300 301 4.532314 AAATTCGTACGAACTCTCCCTT 57.468 40.909 31.29 17.40 36.91 3.95
301 302 4.532314 AATTCGTACGAACTCTCCCTTT 57.468 40.909 31.29 16.69 36.91 3.11
302 303 4.532314 ATTCGTACGAACTCTCCCTTTT 57.468 40.909 31.29 10.05 36.91 2.27
303 304 4.326504 TTCGTACGAACTCTCCCTTTTT 57.673 40.909 26.00 0.00 0.00 1.94
320 321 3.778954 TTTTTGCGGGGGAAAATTCAT 57.221 38.095 0.00 0.00 33.32 2.57
321 322 4.891992 TTTTTGCGGGGGAAAATTCATA 57.108 36.364 0.00 0.00 33.32 2.15
322 323 3.878160 TTTGCGGGGGAAAATTCATAC 57.122 42.857 0.00 0.00 0.00 2.39
323 324 1.384525 TGCGGGGGAAAATTCATACG 58.615 50.000 0.00 0.00 0.00 3.06
324 325 1.065345 TGCGGGGGAAAATTCATACGA 60.065 47.619 0.00 0.00 0.00 3.43
325 326 2.018515 GCGGGGGAAAATTCATACGAA 58.981 47.619 0.00 0.00 35.05 3.85
326 327 2.223409 GCGGGGGAAAATTCATACGAAC 60.223 50.000 0.00 0.00 32.81 3.95
327 328 3.275999 CGGGGGAAAATTCATACGAACT 58.724 45.455 0.00 0.00 32.81 3.01
328 329 3.311596 CGGGGGAAAATTCATACGAACTC 59.688 47.826 0.00 0.00 32.81 3.01
329 330 3.311596 GGGGGAAAATTCATACGAACTCG 59.688 47.826 0.00 0.00 46.33 4.18
384 385 3.867493 GCAAGATCGTCATCACAATCTGA 59.133 43.478 0.00 0.00 0.00 3.27
385 386 4.510711 GCAAGATCGTCATCACAATCTGAT 59.489 41.667 0.00 0.00 40.59 2.90
421 422 1.003223 ACGCGTTAACTGTTTCTTGGC 60.003 47.619 5.58 0.00 0.00 4.52
427 428 3.373565 CTGTTTCTTGGCCCCCGC 61.374 66.667 0.00 0.00 0.00 6.13
443 444 4.806571 GCTGGTACGATCTGCGAA 57.193 55.556 0.00 0.00 44.57 4.70
476 477 1.563173 GTGGTTCTGACACGTTCGC 59.437 57.895 0.00 0.00 0.00 4.70
481 482 3.470567 CTGACACGTTCGCGAGCC 61.471 66.667 17.61 7.57 44.71 4.70
520 521 2.696409 TTTCCACGCGCTACCGACAA 62.696 55.000 5.73 0.00 36.29 3.18
563 565 1.068250 GGGATAGCACGAGCCTGAC 59.932 63.158 0.00 0.00 43.56 3.51
588 590 1.064505 CTCCTCGTGGCGATAACGTAA 59.935 52.381 0.00 0.00 41.70 3.18
645 647 3.067480 GAACGGGTCGCGTATGGGA 62.067 63.158 15.86 0.00 34.22 4.37
646 648 2.359570 GAACGGGTCGCGTATGGGAT 62.360 60.000 15.86 0.00 39.47 3.85
711 735 2.367202 GGGCCGGATTCTCTGACCA 61.367 63.158 5.05 0.00 0.00 4.02
712 736 1.700042 GGGCCGGATTCTCTGACCAT 61.700 60.000 5.05 0.00 0.00 3.55
715 739 1.672881 GCCGGATTCTCTGACCATTTG 59.327 52.381 5.05 0.00 0.00 2.32
716 740 2.941415 GCCGGATTCTCTGACCATTTGT 60.941 50.000 5.05 0.00 0.00 2.83
720 744 5.393962 CGGATTCTCTGACCATTTGTTTTC 58.606 41.667 0.00 0.00 0.00 2.29
721 745 5.182001 CGGATTCTCTGACCATTTGTTTTCT 59.818 40.000 0.00 0.00 0.00 2.52
722 746 6.616017 GGATTCTCTGACCATTTGTTTTCTC 58.384 40.000 0.00 0.00 0.00 2.87
723 747 6.207417 GGATTCTCTGACCATTTGTTTTCTCA 59.793 38.462 0.00 0.00 0.00 3.27
724 748 6.624352 TTCTCTGACCATTTGTTTTCTCAG 57.376 37.500 0.00 0.00 0.00 3.35
725 749 4.516698 TCTCTGACCATTTGTTTTCTCAGC 59.483 41.667 0.00 0.00 0.00 4.26
726 750 3.569701 TCTGACCATTTGTTTTCTCAGCC 59.430 43.478 0.00 0.00 0.00 4.85
732 756 4.082895 CCATTTGTTTTCTCAGCCTCTCAG 60.083 45.833 0.00 0.00 0.00 3.35
742 766 2.587247 GCCTCTCAGGTCACTGCCA 61.587 63.158 0.00 0.00 44.54 4.92
747 771 3.569210 CAGGTCACTGCCACCCCA 61.569 66.667 0.00 0.00 38.01 4.96
749 773 3.570212 GGTCACTGCCACCCCACT 61.570 66.667 0.00 0.00 0.00 4.00
750 774 2.515901 GTCACTGCCACCCCACTT 59.484 61.111 0.00 0.00 0.00 3.16
751 775 1.898574 GTCACTGCCACCCCACTTG 60.899 63.158 0.00 0.00 0.00 3.16
752 776 3.297620 CACTGCCACCCCACTTGC 61.298 66.667 0.00 0.00 0.00 4.01
753 777 4.603535 ACTGCCACCCCACTTGCC 62.604 66.667 0.00 0.00 0.00 4.52
754 778 4.601794 CTGCCACCCCACTTGCCA 62.602 66.667 0.00 0.00 0.00 4.92
755 779 4.149019 TGCCACCCCACTTGCCAA 62.149 61.111 0.00 0.00 0.00 4.52
917 949 1.429927 GCGAGAGACAGACCGATCGA 61.430 60.000 18.66 0.00 32.13 3.59
918 950 1.222300 CGAGAGACAGACCGATCGAT 58.778 55.000 18.66 0.00 32.13 3.59
919 951 1.193650 CGAGAGACAGACCGATCGATC 59.806 57.143 18.66 15.68 32.13 3.69
961 993 2.592861 GCATCCATCAGCCCGTCC 60.593 66.667 0.00 0.00 0.00 4.79
962 994 2.280389 CATCCATCAGCCCGTCCG 60.280 66.667 0.00 0.00 0.00 4.79
964 996 2.797278 ATCCATCAGCCCGTCCGTC 61.797 63.158 0.00 0.00 0.00 4.79
965 997 4.873129 CCATCAGCCCGTCCGTCG 62.873 72.222 0.00 0.00 39.52 5.12
989 1021 2.512515 GCTGCCTAGCTTGTCCGG 60.513 66.667 0.00 0.00 46.57 5.14
990 1022 2.512515 CTGCCTAGCTTGTCCGGC 60.513 66.667 0.00 0.00 42.78 6.13
991 1023 4.096003 TGCCTAGCTTGTCCGGCC 62.096 66.667 0.00 0.00 41.80 6.13
993 1025 4.530857 CCTAGCTTGTCCGGCCGG 62.531 72.222 39.13 39.13 0.00 6.13
1213 1250 3.220999 TATCCTTCCCGCGGCATCG 62.221 63.158 22.85 6.13 39.81 3.84
1234 1271 1.293924 CCATCGATGGTGCTTGACTC 58.706 55.000 32.39 0.00 43.05 3.36
1253 1295 5.981315 TGACTCGTTGAATTCTTTTCTACGT 59.019 36.000 17.18 0.00 43.99 3.57
1275 1317 5.359009 CGTAGTAGATTGGGTAGGTTCAAGA 59.641 44.000 0.00 0.00 0.00 3.02
1280 1322 0.320374 TGGGTAGGTTCAAGACGCAG 59.680 55.000 0.00 0.00 32.84 5.18
1328 1370 1.411977 GCTGCTTGCTCTGATCTAGGA 59.588 52.381 0.00 0.00 38.95 2.94
1365 1407 6.309737 GGTTTGACTTTCATCAATCTCATTGC 59.690 38.462 0.00 0.00 38.37 3.56
1403 1484 2.881074 TCACTTCTAGTCAATGCTCGC 58.119 47.619 0.00 0.00 0.00 5.03
1405 1486 2.857152 CACTTCTAGTCAATGCTCGCTC 59.143 50.000 0.00 0.00 0.00 5.03
1406 1487 2.115595 CTTCTAGTCAATGCTCGCTCG 58.884 52.381 0.00 0.00 0.00 5.03
1407 1488 1.379527 TCTAGTCAATGCTCGCTCGA 58.620 50.000 0.00 0.00 0.00 4.04
1408 1489 1.950216 TCTAGTCAATGCTCGCTCGAT 59.050 47.619 0.00 0.00 0.00 3.59
1410 1491 1.565305 AGTCAATGCTCGCTCGATTC 58.435 50.000 0.00 0.00 0.00 2.52
1411 1492 1.135915 AGTCAATGCTCGCTCGATTCT 59.864 47.619 0.00 0.00 0.00 2.40
1412 1493 1.257415 GTCAATGCTCGCTCGATTCTG 59.743 52.381 0.00 0.00 0.00 3.02
1413 1494 1.134995 TCAATGCTCGCTCGATTCTGT 60.135 47.619 0.00 0.00 0.00 3.41
1414 1495 1.662629 CAATGCTCGCTCGATTCTGTT 59.337 47.619 0.00 0.00 0.00 3.16
1415 1496 1.284657 ATGCTCGCTCGATTCTGTTG 58.715 50.000 0.00 0.00 0.00 3.33
1430 1511 1.747355 CTGTTGGGTGATCATGCTTCC 59.253 52.381 0.00 0.00 0.00 3.46
1493 1578 4.012895 CTGTCGTGGCGGCAACAC 62.013 66.667 15.50 14.01 42.08 3.32
1505 1590 3.082579 GCAACACCGGGTTTTGCCA 62.083 57.895 31.28 0.00 41.54 4.92
1563 1648 4.888917 TGTTCGATCAAATGTGAGGTGTA 58.111 39.130 0.00 0.00 37.14 2.90
1592 1677 1.856629 CATTTCCCTTGACATGGGCT 58.143 50.000 19.53 5.97 44.23 5.19
1736 1821 2.172082 CTCCTTCTCCATTCATCTGGCA 59.828 50.000 0.00 0.00 36.16 4.92
1739 1824 3.568853 CCTTCTCCATTCATCTGGCATTC 59.431 47.826 0.00 0.00 36.16 2.67
1740 1825 3.937778 TCTCCATTCATCTGGCATTCA 57.062 42.857 0.00 0.00 36.16 2.57
1741 1826 3.816994 TCTCCATTCATCTGGCATTCAG 58.183 45.455 0.00 0.00 44.68 3.02
1791 1876 5.956070 GCTTAACATCATCGATCATTATGCG 59.044 40.000 0.00 0.00 0.00 4.73
1801 1886 0.815213 TCATTATGCGCTGCCCTGTC 60.815 55.000 9.73 0.00 0.00 3.51
1921 2006 6.183360 ACGTCAATGTCAAAAGAACCTTCAAT 60.183 34.615 0.00 0.00 0.00 2.57
1924 2009 8.134895 GTCAATGTCAAAAGAACCTTCAATACA 58.865 33.333 0.00 0.00 0.00 2.29
1980 2065 2.341846 ACTTTCTCGTCTTTTGCCCA 57.658 45.000 0.00 0.00 0.00 5.36
1982 2067 2.814336 ACTTTCTCGTCTTTTGCCCATC 59.186 45.455 0.00 0.00 0.00 3.51
1983 2068 2.859165 TTCTCGTCTTTTGCCCATCT 57.141 45.000 0.00 0.00 0.00 2.90
1985 2070 3.140325 TCTCGTCTTTTGCCCATCTTT 57.860 42.857 0.00 0.00 0.00 2.52
1986 2071 2.813754 TCTCGTCTTTTGCCCATCTTTG 59.186 45.455 0.00 0.00 0.00 2.77
1987 2072 2.554032 CTCGTCTTTTGCCCATCTTTGT 59.446 45.455 0.00 0.00 0.00 2.83
1988 2073 2.552315 TCGTCTTTTGCCCATCTTTGTC 59.448 45.455 0.00 0.00 0.00 3.18
1990 2075 3.243367 CGTCTTTTGCCCATCTTTGTCAA 60.243 43.478 0.00 0.00 0.00 3.18
1991 2076 4.692228 GTCTTTTGCCCATCTTTGTCAAA 58.308 39.130 0.00 0.00 0.00 2.69
2004 2089 5.708948 TCTTTGTCAAAAGAACACTTGGTG 58.291 37.500 0.00 0.00 46.91 4.17
2014 2139 1.086696 ACACTTGGTGATGCGTATGC 58.913 50.000 0.00 0.00 38.14 3.14
2027 2152 5.691754 TGATGCGTATGCTTACAATAGTCTG 59.308 40.000 8.69 0.00 43.34 3.51
2028 2153 3.802139 TGCGTATGCTTACAATAGTCTGC 59.198 43.478 8.69 3.54 43.34 4.26
2035 2160 4.402474 TGCTTACAATAGTCTGCTCTGCTA 59.598 41.667 0.00 0.00 0.00 3.49
2048 2173 5.095145 TGCTCTGCTATCAAATTCTCAGT 57.905 39.130 0.00 0.00 0.00 3.41
2088 2213 4.850680 ACACTGGTTGTTTAGTCCTTTGA 58.149 39.130 0.00 0.00 33.09 2.69
2280 2615 8.828688 AGTGGTCAGTTAGTTACTTGAATTAC 57.171 34.615 0.00 0.00 33.85 1.89
2281 2616 7.597743 AGTGGTCAGTTAGTTACTTGAATTACG 59.402 37.037 0.00 0.00 33.85 3.18
2284 2627 8.592998 GGTCAGTTAGTTACTTGAATTACGATG 58.407 37.037 0.00 0.00 33.85 3.84
2288 2632 9.355215 AGTTAGTTACTTGAATTACGATGTCAG 57.645 33.333 0.00 0.00 31.29 3.51
2315 2659 0.179073 ACTGTCGTGCTCTGCAGTTT 60.179 50.000 14.67 0.00 40.08 2.66
2317 2661 0.104855 TGTCGTGCTCTGCAGTTTCT 59.895 50.000 14.67 0.00 40.08 2.52
2322 2666 3.679980 TCGTGCTCTGCAGTTTCTATTTC 59.320 43.478 14.67 0.00 40.08 2.17
2324 2668 4.153117 CGTGCTCTGCAGTTTCTATTTCTT 59.847 41.667 14.67 0.00 40.08 2.52
2331 2675 8.311650 TCTGCAGTTTCTATTTCTTTACTGTC 57.688 34.615 14.67 0.00 36.33 3.51
2332 2676 7.931407 TCTGCAGTTTCTATTTCTTTACTGTCA 59.069 33.333 14.67 0.00 36.33 3.58
2443 2787 1.305201 ACAATGTCGACACCGCTTTT 58.695 45.000 22.71 7.25 35.37 2.27
2461 2805 0.890542 TTCTGTGCATCGCCAAGCTT 60.891 50.000 0.00 0.00 0.00 3.74
2465 2809 4.503314 GCATCGCCAAGCTTGCCC 62.503 66.667 21.43 12.49 32.08 5.36
2538 2888 4.592942 TCTTAAGATGTTTGCCAGATGCT 58.407 39.130 0.00 0.00 42.00 3.79
2547 2897 1.985473 TGCCAGATGCTGTGAGTTTT 58.015 45.000 0.00 0.00 42.00 2.43
2548 2898 3.138884 TGCCAGATGCTGTGAGTTTTA 57.861 42.857 0.00 0.00 42.00 1.52
2560 2910 6.595326 TGCTGTGAGTTTTATCAGGTTATCTG 59.405 38.462 0.00 0.00 44.68 2.90
2587 2944 4.353777 CCTATAGGCTAGAGGGTATGCAA 58.646 47.826 24.52 0.00 33.54 4.08
2590 2969 5.850046 ATAGGCTAGAGGGTATGCAATTT 57.150 39.130 0.00 0.00 0.00 1.82
2597 2976 6.425417 GCTAGAGGGTATGCAATTTCTTAGTC 59.575 42.308 0.00 0.00 0.00 2.59
2614 2993 5.413833 TCTTAGTCCACTAGTGTCTTAACCG 59.586 44.000 21.18 3.81 0.00 4.44
2670 3049 1.616159 TGCAGAACAAGGCCCTAAAC 58.384 50.000 0.00 0.00 0.00 2.01
2672 3051 1.165270 CAGAACAAGGCCCTAAACCG 58.835 55.000 0.00 0.00 0.00 4.44
2723 3125 4.026744 AGGCTAGCATCTTCAGTACAAGA 58.973 43.478 18.24 0.00 36.82 3.02
2758 3160 6.772233 TGCTACATTTATTGCACTGTATCCAT 59.228 34.615 0.00 0.00 0.00 3.41
2788 3190 8.596271 TGAATGTAATGTAATGTACCATACGG 57.404 34.615 0.00 0.00 38.77 4.02
2917 3319 5.364778 TGTAACATGTAGCACTTCAACTGT 58.635 37.500 0.00 0.00 0.00 3.55
2938 3341 5.924356 TGTTTGGTCTGATTGTAACAGAGA 58.076 37.500 0.00 0.00 43.58 3.10
2961 3364 6.948886 AGAATACTCACTCTAGTTGACTGGAA 59.051 38.462 0.00 0.00 32.98 3.53
3078 3514 4.199432 AGTACATCAGAGTTTGGAGCAG 57.801 45.455 0.00 0.00 0.00 4.24
3174 3610 4.403113 AGGCGACTTAAAACCTTTTGGAAA 59.597 37.500 0.00 0.00 39.21 3.13
3197 3633 6.884280 AGGCATACCATCTTGTTAAATAGC 57.116 37.500 0.00 0.00 39.06 2.97
3210 3646 0.657840 AAATAGCATTCCAGCGACGC 59.342 50.000 13.03 13.03 40.15 5.19
3216 3652 0.247814 CATTCCAGCGACGCATCAAC 60.248 55.000 23.70 0.00 0.00 3.18
3279 3715 1.496060 TGTTCCCACACAGTCTCAGT 58.504 50.000 0.00 0.00 0.00 3.41
3353 3789 5.047306 TCCACTTCTTCGCTATCTTCTTCAA 60.047 40.000 0.00 0.00 0.00 2.69
3400 3840 3.614616 CGATTTCCTCTTCCTCTTTGTCG 59.385 47.826 0.00 0.00 0.00 4.35
3431 3871 3.153130 TCGTCATCATCCTCATCCTCTC 58.847 50.000 0.00 0.00 0.00 3.20
3466 3906 6.811634 ATCATATCCTCATCCTCAATCTCC 57.188 41.667 0.00 0.00 0.00 3.71
3578 4019 2.035961 TGCGACTTAACACAAGAGAGCT 59.964 45.455 0.00 0.00 0.00 4.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 1.457009 TAAGGGTTGCCGCGCTTTTT 61.457 50.000 5.56 0.00 41.07 1.94
13 14 1.248101 ATAAGGGTTGCCGCGCTTTT 61.248 50.000 5.56 2.91 41.07 2.27
14 15 1.654023 GATAAGGGTTGCCGCGCTTT 61.654 55.000 5.56 0.00 41.07 3.51
15 16 2.045340 ATAAGGGTTGCCGCGCTT 60.045 55.556 5.56 10.72 42.85 4.68
16 17 2.513897 GATAAGGGTTGCCGCGCT 60.514 61.111 5.56 0.00 0.00 5.92
17 18 3.583086 GGATAAGGGTTGCCGCGC 61.583 66.667 0.00 0.00 0.00 6.86
18 19 2.124901 TGGATAAGGGTTGCCGCG 60.125 61.111 0.00 0.00 0.00 6.46
19 20 0.679960 AAGTGGATAAGGGTTGCCGC 60.680 55.000 0.00 0.00 0.00 6.53
20 21 1.094785 CAAGTGGATAAGGGTTGCCG 58.905 55.000 0.00 0.00 0.00 5.69
21 22 2.215942 ACAAGTGGATAAGGGTTGCC 57.784 50.000 0.00 0.00 0.00 4.52
22 23 2.492088 GGAACAAGTGGATAAGGGTTGC 59.508 50.000 0.00 0.00 0.00 4.17
23 24 3.758554 CTGGAACAAGTGGATAAGGGTTG 59.241 47.826 0.00 0.00 38.70 3.77
24 25 3.245264 CCTGGAACAAGTGGATAAGGGTT 60.245 47.826 0.00 0.00 38.70 4.11
25 26 2.308866 CCTGGAACAAGTGGATAAGGGT 59.691 50.000 0.00 0.00 38.70 4.34
26 27 2.357154 CCCTGGAACAAGTGGATAAGGG 60.357 54.545 0.00 0.00 38.70 3.95
27 28 2.945890 GCCCTGGAACAAGTGGATAAGG 60.946 54.545 0.00 0.00 38.70 2.69
28 29 2.369394 GCCCTGGAACAAGTGGATAAG 58.631 52.381 0.00 0.00 38.70 1.73
29 30 1.005450 GGCCCTGGAACAAGTGGATAA 59.995 52.381 0.00 0.00 38.70 1.75
30 31 0.623723 GGCCCTGGAACAAGTGGATA 59.376 55.000 0.00 0.00 38.70 2.59
31 32 1.384191 GGCCCTGGAACAAGTGGAT 59.616 57.895 0.00 0.00 38.70 3.41
32 33 2.840753 GGGCCCTGGAACAAGTGGA 61.841 63.158 17.04 0.00 38.70 4.02
33 34 2.283173 GGGCCCTGGAACAAGTGG 60.283 66.667 17.04 0.00 38.70 4.00
34 35 1.903404 GTGGGCCCTGGAACAAGTG 60.903 63.158 25.70 0.00 38.70 3.16
35 36 1.655114 AAGTGGGCCCTGGAACAAGT 61.655 55.000 25.70 0.00 38.70 3.16
36 37 0.469892 AAAGTGGGCCCTGGAACAAG 60.470 55.000 25.70 0.00 38.70 3.16
37 38 0.758685 CAAAGTGGGCCCTGGAACAA 60.759 55.000 25.70 0.00 38.70 2.83
38 39 1.152567 CAAAGTGGGCCCTGGAACA 60.153 57.895 25.70 0.00 0.00 3.18
39 40 1.152830 TCAAAGTGGGCCCTGGAAC 59.847 57.895 25.70 13.19 0.00 3.62
40 41 1.152830 GTCAAAGTGGGCCCTGGAA 59.847 57.895 25.70 0.00 0.00 3.53
41 42 2.843545 GTCAAAGTGGGCCCTGGA 59.156 61.111 25.70 10.29 0.00 3.86
42 43 2.672996 CGTCAAAGTGGGCCCTGG 60.673 66.667 25.70 7.87 0.00 4.45
43 44 3.365265 GCGTCAAAGTGGGCCCTG 61.365 66.667 25.70 13.45 0.00 4.45
44 45 4.660938 GGCGTCAAAGTGGGCCCT 62.661 66.667 25.70 0.00 39.67 5.19
45 46 4.660938 AGGCGTCAAAGTGGGCCC 62.661 66.667 17.59 17.59 46.75 5.80
46 47 3.056328 GAGGCGTCAAAGTGGGCC 61.056 66.667 0.00 0.00 45.91 5.80
47 48 2.281484 TGAGGCGTCAAAGTGGGC 60.281 61.111 6.64 0.00 0.00 5.36
48 49 2.328099 GCTGAGGCGTCAAAGTGGG 61.328 63.158 10.76 0.00 30.14 4.61
49 50 1.165907 TTGCTGAGGCGTCAAAGTGG 61.166 55.000 10.76 0.00 42.25 4.00
50 51 0.040958 GTTGCTGAGGCGTCAAAGTG 60.041 55.000 10.76 0.00 42.25 3.16
51 52 1.166531 GGTTGCTGAGGCGTCAAAGT 61.167 55.000 10.76 0.00 42.25 2.66
52 53 1.165907 TGGTTGCTGAGGCGTCAAAG 61.166 55.000 10.76 0.89 42.25 2.77
53 54 0.537143 ATGGTTGCTGAGGCGTCAAA 60.537 50.000 10.76 0.00 42.25 2.69
54 55 1.073025 ATGGTTGCTGAGGCGTCAA 59.927 52.632 10.76 0.00 42.25 3.18
55 56 1.672030 CATGGTTGCTGAGGCGTCA 60.672 57.895 9.07 9.07 42.25 4.35
56 57 1.364626 CTCATGGTTGCTGAGGCGTC 61.365 60.000 0.00 0.00 42.25 5.19
57 58 1.376424 CTCATGGTTGCTGAGGCGT 60.376 57.895 0.00 0.00 42.25 5.68
58 59 3.494378 CTCATGGTTGCTGAGGCG 58.506 61.111 0.00 0.00 42.25 5.52
61 62 2.864114 CCACCTCATGGTTGCTGAG 58.136 57.895 0.00 0.00 46.05 3.35
70 71 2.981560 GCCAACGCACCACCTCATG 61.982 63.158 0.00 0.00 34.03 3.07
71 72 2.672996 GCCAACGCACCACCTCAT 60.673 61.111 0.00 0.00 34.03 2.90
72 73 4.947147 GGCCAACGCACCACCTCA 62.947 66.667 0.00 0.00 36.38 3.86
73 74 4.643387 AGGCCAACGCACCACCTC 62.643 66.667 5.01 0.00 36.38 3.85
74 75 4.643387 GAGGCCAACGCACCACCT 62.643 66.667 5.01 0.00 36.38 4.00
77 78 4.980805 GACGAGGCCAACGCACCA 62.981 66.667 19.42 0.00 36.38 4.17
79 80 4.980805 TGGACGAGGCCAACGCAC 62.981 66.667 19.42 13.70 34.31 5.34
80 81 4.243008 TTGGACGAGGCCAACGCA 62.243 61.111 19.42 9.63 42.75 5.24
84 85 0.321564 CATCTGTTGGACGAGGCCAA 60.322 55.000 6.26 6.26 45.28 4.52
85 86 1.296392 CATCTGTTGGACGAGGCCA 59.704 57.895 5.01 0.00 35.78 5.36
86 87 4.208632 CATCTGTTGGACGAGGCC 57.791 61.111 0.00 0.00 0.00 5.19
95 96 1.811965 TGCGTCCAAATCCATCTGTTG 59.188 47.619 0.00 0.00 0.00 3.33
96 97 1.812571 GTGCGTCCAAATCCATCTGTT 59.187 47.619 0.00 0.00 0.00 3.16
97 98 1.453155 GTGCGTCCAAATCCATCTGT 58.547 50.000 0.00 0.00 0.00 3.41
98 99 0.734889 GGTGCGTCCAAATCCATCTG 59.265 55.000 0.00 0.00 35.97 2.90
99 100 0.327924 TGGTGCGTCCAAATCCATCT 59.672 50.000 0.00 0.00 44.12 2.90
100 101 2.866872 TGGTGCGTCCAAATCCATC 58.133 52.632 0.00 0.00 44.12 3.51
121 122 8.706035 GCTAATGTTAGTTTTCTTTCGACTGTA 58.294 33.333 2.11 0.00 33.32 2.74
122 123 7.307811 GGCTAATGTTAGTTTTCTTTCGACTGT 60.308 37.037 2.11 0.00 33.32 3.55
123 124 7.015877 GGCTAATGTTAGTTTTCTTTCGACTG 58.984 38.462 2.11 0.00 33.32 3.51
124 125 6.935208 AGGCTAATGTTAGTTTTCTTTCGACT 59.065 34.615 0.00 0.00 33.32 4.18
125 126 7.130303 AGGCTAATGTTAGTTTTCTTTCGAC 57.870 36.000 0.00 0.00 33.32 4.20
126 127 6.090358 CGAGGCTAATGTTAGTTTTCTTTCGA 59.910 38.462 0.00 0.00 33.32 3.71
127 128 6.241385 CGAGGCTAATGTTAGTTTTCTTTCG 58.759 40.000 0.00 0.00 33.32 3.46
128 129 6.022208 GCGAGGCTAATGTTAGTTTTCTTTC 58.978 40.000 0.00 0.00 33.32 2.62
129 130 5.106277 GGCGAGGCTAATGTTAGTTTTCTTT 60.106 40.000 0.00 0.00 33.32 2.52
130 131 4.395231 GGCGAGGCTAATGTTAGTTTTCTT 59.605 41.667 0.00 0.00 33.32 2.52
131 132 3.939592 GGCGAGGCTAATGTTAGTTTTCT 59.060 43.478 0.00 0.00 33.32 2.52
132 133 3.939592 AGGCGAGGCTAATGTTAGTTTTC 59.060 43.478 0.00 0.00 33.32 2.29
133 134 3.939592 GAGGCGAGGCTAATGTTAGTTTT 59.060 43.478 0.00 0.00 33.32 2.43
134 135 3.055385 TGAGGCGAGGCTAATGTTAGTTT 60.055 43.478 0.00 0.00 33.32 2.66
135 136 2.500098 TGAGGCGAGGCTAATGTTAGTT 59.500 45.455 0.00 0.00 33.32 2.24
136 137 2.101582 CTGAGGCGAGGCTAATGTTAGT 59.898 50.000 0.00 0.00 33.32 2.24
137 138 2.748605 CTGAGGCGAGGCTAATGTTAG 58.251 52.381 0.00 0.00 0.00 2.34
138 139 1.202533 GCTGAGGCGAGGCTAATGTTA 60.203 52.381 0.00 0.00 0.00 2.41
139 140 0.462759 GCTGAGGCGAGGCTAATGTT 60.463 55.000 0.00 0.00 0.00 2.71
140 141 1.144936 GCTGAGGCGAGGCTAATGT 59.855 57.895 0.00 0.00 0.00 2.71
141 142 0.462581 TTGCTGAGGCGAGGCTAATG 60.463 55.000 0.00 0.00 42.25 1.90
142 143 0.462759 GTTGCTGAGGCGAGGCTAAT 60.463 55.000 0.00 0.00 42.25 1.73
143 144 1.079127 GTTGCTGAGGCGAGGCTAA 60.079 57.895 0.00 0.00 42.25 3.09
144 145 2.579201 GTTGCTGAGGCGAGGCTA 59.421 61.111 0.00 0.00 42.25 3.93
145 146 4.400961 GGTTGCTGAGGCGAGGCT 62.401 66.667 0.00 0.00 42.25 4.58
146 147 4.704833 TGGTTGCTGAGGCGAGGC 62.705 66.667 0.00 0.00 42.25 4.70
147 148 0.962356 ATTTGGTTGCTGAGGCGAGG 60.962 55.000 0.00 0.00 42.25 4.63
148 149 0.169672 CATTTGGTTGCTGAGGCGAG 59.830 55.000 0.00 0.00 42.25 5.03
149 150 1.243342 CCATTTGGTTGCTGAGGCGA 61.243 55.000 0.00 0.00 42.25 5.54
150 151 1.213537 CCATTTGGTTGCTGAGGCG 59.786 57.895 0.00 0.00 42.25 5.52
151 152 0.244721 GTCCATTTGGTTGCTGAGGC 59.755 55.000 0.00 0.00 36.34 4.70
152 153 0.523072 CGTCCATTTGGTTGCTGAGG 59.477 55.000 0.00 0.00 36.34 3.86
153 154 0.523072 CCGTCCATTTGGTTGCTGAG 59.477 55.000 0.00 0.00 36.34 3.35
154 155 0.179004 ACCGTCCATTTGGTTGCTGA 60.179 50.000 0.00 0.00 33.81 4.26
155 156 1.529226 TACCGTCCATTTGGTTGCTG 58.471 50.000 0.00 0.00 39.70 4.41
156 157 2.159382 CTTACCGTCCATTTGGTTGCT 58.841 47.619 0.00 0.00 39.70 3.91
157 158 2.156098 TCTTACCGTCCATTTGGTTGC 58.844 47.619 0.00 0.00 39.70 4.17
158 159 3.364565 CGTTCTTACCGTCCATTTGGTTG 60.365 47.826 0.00 0.00 39.70 3.77
159 160 2.809696 CGTTCTTACCGTCCATTTGGTT 59.190 45.455 0.00 0.00 39.70 3.67
160 161 2.224354 ACGTTCTTACCGTCCATTTGGT 60.224 45.455 0.00 0.00 42.34 3.67
161 162 2.158841 CACGTTCTTACCGTCCATTTGG 59.841 50.000 0.00 0.00 36.17 3.28
162 163 2.412325 GCACGTTCTTACCGTCCATTTG 60.412 50.000 0.00 0.00 36.17 2.32
163 164 1.802365 GCACGTTCTTACCGTCCATTT 59.198 47.619 0.00 0.00 36.17 2.32
164 165 1.270412 TGCACGTTCTTACCGTCCATT 60.270 47.619 0.00 0.00 36.17 3.16
165 166 0.319083 TGCACGTTCTTACCGTCCAT 59.681 50.000 0.00 0.00 36.17 3.41
166 167 0.104487 TTGCACGTTCTTACCGTCCA 59.896 50.000 0.00 0.00 36.17 4.02
167 168 0.509929 GTTGCACGTTCTTACCGTCC 59.490 55.000 0.00 0.00 36.17 4.79
168 169 1.454653 GAGTTGCACGTTCTTACCGTC 59.545 52.381 0.00 0.00 36.17 4.79
169 170 1.202440 TGAGTTGCACGTTCTTACCGT 60.202 47.619 0.00 0.00 39.52 4.83
170 171 1.191647 GTGAGTTGCACGTTCTTACCG 59.808 52.381 0.00 0.00 37.83 4.02
171 172 2.943843 GTGAGTTGCACGTTCTTACC 57.056 50.000 0.00 0.00 37.83 2.85
180 181 1.668151 GGAGGACGGTGAGTTGCAC 60.668 63.158 0.00 0.00 46.98 4.57
181 182 2.741092 GGAGGACGGTGAGTTGCA 59.259 61.111 0.00 0.00 0.00 4.08
182 183 2.047179 GGGAGGACGGTGAGTTGC 60.047 66.667 0.00 0.00 0.00 4.17
183 184 1.293498 CTGGGAGGACGGTGAGTTG 59.707 63.158 0.00 0.00 0.00 3.16
184 185 0.763223 AACTGGGAGGACGGTGAGTT 60.763 55.000 0.00 0.00 0.00 3.01
185 186 0.763223 AAACTGGGAGGACGGTGAGT 60.763 55.000 0.00 0.00 0.00 3.41
186 187 0.396811 AAAACTGGGAGGACGGTGAG 59.603 55.000 0.00 0.00 0.00 3.51
187 188 0.841289 AAAAACTGGGAGGACGGTGA 59.159 50.000 0.00 0.00 0.00 4.02
188 189 0.951558 CAAAAACTGGGAGGACGGTG 59.048 55.000 0.00 0.00 0.00 4.94
189 190 0.179001 CCAAAAACTGGGAGGACGGT 60.179 55.000 0.00 0.00 42.17 4.83
190 191 2.641197 CCAAAAACTGGGAGGACGG 58.359 57.895 0.00 0.00 42.17 4.79
198 199 2.704572 TGCAACAAACCCAAAAACTGG 58.295 42.857 0.00 0.00 45.97 4.00
199 200 6.259608 TGAATATGCAACAAACCCAAAAACTG 59.740 34.615 0.00 0.00 0.00 3.16
200 201 6.259829 GTGAATATGCAACAAACCCAAAAACT 59.740 34.615 0.00 0.00 0.00 2.66
201 202 6.037610 TGTGAATATGCAACAAACCCAAAAAC 59.962 34.615 0.00 0.00 0.00 2.43
202 203 6.115446 TGTGAATATGCAACAAACCCAAAAA 58.885 32.000 0.00 0.00 0.00 1.94
203 204 5.674525 TGTGAATATGCAACAAACCCAAAA 58.325 33.333 0.00 0.00 0.00 2.44
204 205 5.163364 ACTGTGAATATGCAACAAACCCAAA 60.163 36.000 0.00 0.00 0.00 3.28
205 206 4.343526 ACTGTGAATATGCAACAAACCCAA 59.656 37.500 0.00 0.00 0.00 4.12
206 207 3.894427 ACTGTGAATATGCAACAAACCCA 59.106 39.130 0.00 0.00 0.00 4.51
207 208 4.519540 ACTGTGAATATGCAACAAACCC 57.480 40.909 0.00 0.00 0.00 4.11
208 209 4.685628 CCAACTGTGAATATGCAACAAACC 59.314 41.667 0.00 0.00 0.00 3.27
209 210 5.402270 GTCCAACTGTGAATATGCAACAAAC 59.598 40.000 0.00 0.00 0.00 2.93
210 211 5.527951 GTCCAACTGTGAATATGCAACAAA 58.472 37.500 0.00 0.00 0.00 2.83
211 212 4.320129 CGTCCAACTGTGAATATGCAACAA 60.320 41.667 0.00 0.00 0.00 2.83
212 213 3.188254 CGTCCAACTGTGAATATGCAACA 59.812 43.478 0.00 0.00 0.00 3.33
213 214 3.435327 TCGTCCAACTGTGAATATGCAAC 59.565 43.478 0.00 0.00 0.00 4.17
214 215 3.669536 TCGTCCAACTGTGAATATGCAA 58.330 40.909 0.00 0.00 0.00 4.08
215 216 3.261580 CTCGTCCAACTGTGAATATGCA 58.738 45.455 0.00 0.00 0.00 3.96
216 217 2.609459 CCTCGTCCAACTGTGAATATGC 59.391 50.000 0.00 0.00 0.00 3.14
217 218 2.609459 GCCTCGTCCAACTGTGAATATG 59.391 50.000 0.00 0.00 0.00 1.78
218 219 2.236146 TGCCTCGTCCAACTGTGAATAT 59.764 45.455 0.00 0.00 0.00 1.28
219 220 1.621317 TGCCTCGTCCAACTGTGAATA 59.379 47.619 0.00 0.00 0.00 1.75
220 221 0.396435 TGCCTCGTCCAACTGTGAAT 59.604 50.000 0.00 0.00 0.00 2.57
221 222 0.179234 TTGCCTCGTCCAACTGTGAA 59.821 50.000 0.00 0.00 0.00 3.18
222 223 0.179234 TTTGCCTCGTCCAACTGTGA 59.821 50.000 0.00 0.00 0.00 3.58
223 224 1.002468 CTTTTGCCTCGTCCAACTGTG 60.002 52.381 0.00 0.00 0.00 3.66
224 225 1.308998 CTTTTGCCTCGTCCAACTGT 58.691 50.000 0.00 0.00 0.00 3.55
225 226 1.308998 ACTTTTGCCTCGTCCAACTG 58.691 50.000 0.00 0.00 0.00 3.16
226 227 2.052782 AACTTTTGCCTCGTCCAACT 57.947 45.000 0.00 0.00 0.00 3.16
227 228 3.065648 TGTTAACTTTTGCCTCGTCCAAC 59.934 43.478 7.22 0.00 0.00 3.77
228 229 3.280295 TGTTAACTTTTGCCTCGTCCAA 58.720 40.909 7.22 0.00 0.00 3.53
229 230 2.875933 CTGTTAACTTTTGCCTCGTCCA 59.124 45.455 7.22 0.00 0.00 4.02
230 231 3.135994 TCTGTTAACTTTTGCCTCGTCC 58.864 45.455 7.22 0.00 0.00 4.79
231 232 5.049680 TGAATCTGTTAACTTTTGCCTCGTC 60.050 40.000 7.22 0.00 0.00 4.20
232 233 4.819630 TGAATCTGTTAACTTTTGCCTCGT 59.180 37.500 7.22 0.00 0.00 4.18
233 234 5.147162 GTGAATCTGTTAACTTTTGCCTCG 58.853 41.667 7.22 0.00 0.00 4.63
234 235 6.072112 TGTGAATCTGTTAACTTTTGCCTC 57.928 37.500 7.22 0.00 0.00 4.70
235 236 6.265196 TCATGTGAATCTGTTAACTTTTGCCT 59.735 34.615 7.22 0.00 0.00 4.75
236 237 6.363357 GTCATGTGAATCTGTTAACTTTTGCC 59.637 38.462 7.22 0.00 0.00 4.52
237 238 7.113965 CAGTCATGTGAATCTGTTAACTTTTGC 59.886 37.037 7.22 0.00 0.00 3.68
238 239 8.131100 ACAGTCATGTGAATCTGTTAACTTTTG 58.869 33.333 7.22 0.00 38.57 2.44
239 240 8.225603 ACAGTCATGTGAATCTGTTAACTTTT 57.774 30.769 7.22 0.00 38.57 2.27
240 241 7.807977 ACAGTCATGTGAATCTGTTAACTTT 57.192 32.000 7.22 0.00 38.57 2.66
241 242 7.807977 AACAGTCATGTGAATCTGTTAACTT 57.192 32.000 13.95 0.00 45.31 2.66
242 243 7.807977 AAACAGTCATGTGAATCTGTTAACT 57.192 32.000 15.20 3.02 46.06 2.24
243 244 8.230486 CCTAAACAGTCATGTGAATCTGTTAAC 58.770 37.037 15.20 0.00 46.06 2.01
244 245 7.390440 CCCTAAACAGTCATGTGAATCTGTTAA 59.610 37.037 15.20 0.00 46.06 2.01
245 246 6.878923 CCCTAAACAGTCATGTGAATCTGTTA 59.121 38.462 15.20 7.12 46.06 2.41
247 248 5.013079 TCCCTAAACAGTCATGTGAATCTGT 59.987 40.000 0.00 1.67 40.39 3.41
248 249 5.352569 GTCCCTAAACAGTCATGTGAATCTG 59.647 44.000 0.00 0.00 40.39 2.90
249 250 5.491982 GTCCCTAAACAGTCATGTGAATCT 58.508 41.667 0.00 0.00 40.39 2.40
250 251 4.636206 GGTCCCTAAACAGTCATGTGAATC 59.364 45.833 0.00 0.00 40.39 2.52
251 252 4.042809 TGGTCCCTAAACAGTCATGTGAAT 59.957 41.667 0.00 0.00 40.39 2.57
252 253 3.392947 TGGTCCCTAAACAGTCATGTGAA 59.607 43.478 0.00 0.00 40.39 3.18
253 254 2.976185 TGGTCCCTAAACAGTCATGTGA 59.024 45.455 0.00 0.00 40.39 3.58
254 255 3.007940 TCTGGTCCCTAAACAGTCATGTG 59.992 47.826 0.00 0.00 40.39 3.21
255 256 3.008049 GTCTGGTCCCTAAACAGTCATGT 59.992 47.826 0.00 0.00 43.15 3.21
256 257 3.007940 TGTCTGGTCCCTAAACAGTCATG 59.992 47.826 0.00 0.00 34.02 3.07
257 258 3.248024 TGTCTGGTCCCTAAACAGTCAT 58.752 45.455 0.00 0.00 34.02 3.06
258 259 2.684943 TGTCTGGTCCCTAAACAGTCA 58.315 47.619 0.00 0.00 34.02 3.41
259 260 3.764237 TTGTCTGGTCCCTAAACAGTC 57.236 47.619 0.00 0.00 34.02 3.51
260 261 4.513406 TTTTGTCTGGTCCCTAAACAGT 57.487 40.909 0.00 0.00 34.02 3.55
261 262 5.334879 CGAATTTTGTCTGGTCCCTAAACAG 60.335 44.000 0.00 0.00 0.00 3.16
262 263 4.517453 CGAATTTTGTCTGGTCCCTAAACA 59.483 41.667 0.00 0.00 0.00 2.83
263 264 4.517832 ACGAATTTTGTCTGGTCCCTAAAC 59.482 41.667 0.00 0.00 0.00 2.01
264 265 4.721132 ACGAATTTTGTCTGGTCCCTAAA 58.279 39.130 0.00 0.00 0.00 1.85
265 266 4.360951 ACGAATTTTGTCTGGTCCCTAA 57.639 40.909 0.00 0.00 0.00 2.69
266 267 4.618927 CGTACGAATTTTGTCTGGTCCCTA 60.619 45.833 10.44 0.00 0.00 3.53
267 268 2.951229 ACGAATTTTGTCTGGTCCCT 57.049 45.000 0.00 0.00 0.00 4.20
268 269 2.414138 CGTACGAATTTTGTCTGGTCCC 59.586 50.000 10.44 0.00 0.00 4.46
269 270 3.319755 TCGTACGAATTTTGTCTGGTCC 58.680 45.455 17.11 0.00 0.00 4.46
270 271 4.446719 AGTTCGTACGAATTTTGTCTGGTC 59.553 41.667 31.25 14.89 36.45 4.02
271 272 4.374399 AGTTCGTACGAATTTTGTCTGGT 58.626 39.130 31.25 5.93 36.45 4.00
272 273 4.684703 AGAGTTCGTACGAATTTTGTCTGG 59.315 41.667 31.25 0.00 36.45 3.86
273 274 5.164080 GGAGAGTTCGTACGAATTTTGTCTG 60.164 44.000 31.25 0.00 36.45 3.51
274 275 4.922103 GGAGAGTTCGTACGAATTTTGTCT 59.078 41.667 31.25 24.63 36.45 3.41
275 276 4.091075 GGGAGAGTTCGTACGAATTTTGTC 59.909 45.833 31.25 24.19 36.45 3.18
276 277 3.992427 GGGAGAGTTCGTACGAATTTTGT 59.008 43.478 31.25 18.78 36.45 2.83
277 278 4.243270 AGGGAGAGTTCGTACGAATTTTG 58.757 43.478 31.25 0.00 36.45 2.44
278 279 4.532314 AGGGAGAGTTCGTACGAATTTT 57.468 40.909 31.25 22.94 36.45 1.82
279 280 4.532314 AAGGGAGAGTTCGTACGAATTT 57.468 40.909 31.25 22.56 36.45 1.82
280 281 4.532314 AAAGGGAGAGTTCGTACGAATT 57.468 40.909 31.25 27.51 36.45 2.17
281 282 4.532314 AAAAGGGAGAGTTCGTACGAAT 57.468 40.909 31.25 20.29 36.45 3.34
282 283 4.326504 AAAAAGGGAGAGTTCGTACGAA 57.673 40.909 26.00 26.00 0.00 3.85
300 301 3.778954 ATGAATTTTCCCCCGCAAAAA 57.221 38.095 0.00 0.00 0.00 1.94
301 302 3.367498 CGTATGAATTTTCCCCCGCAAAA 60.367 43.478 0.00 0.00 0.00 2.44
302 303 2.164624 CGTATGAATTTTCCCCCGCAAA 59.835 45.455 0.00 0.00 0.00 3.68
303 304 1.746220 CGTATGAATTTTCCCCCGCAA 59.254 47.619 0.00 0.00 0.00 4.85
304 305 1.065345 TCGTATGAATTTTCCCCCGCA 60.065 47.619 0.00 0.00 0.00 5.69
305 306 1.670791 TCGTATGAATTTTCCCCCGC 58.329 50.000 0.00 0.00 0.00 6.13
306 307 3.275999 AGTTCGTATGAATTTTCCCCCG 58.724 45.455 0.00 0.00 36.29 5.73
307 308 3.311596 CGAGTTCGTATGAATTTTCCCCC 59.688 47.826 0.00 0.00 36.29 5.40
308 309 4.531659 CGAGTTCGTATGAATTTTCCCC 57.468 45.455 0.00 0.00 36.29 4.81
329 330 1.611491 TCTCAAATTTCCCGTGCCAAC 59.389 47.619 0.00 0.00 0.00 3.77
330 331 1.885887 CTCTCAAATTTCCCGTGCCAA 59.114 47.619 0.00 0.00 0.00 4.52
331 332 1.533625 CTCTCAAATTTCCCGTGCCA 58.466 50.000 0.00 0.00 0.00 4.92
332 333 0.811281 CCTCTCAAATTTCCCGTGCC 59.189 55.000 0.00 0.00 0.00 5.01
333 334 1.468914 GTCCTCTCAAATTTCCCGTGC 59.531 52.381 0.00 0.00 0.00 5.34
334 335 1.732259 CGTCCTCTCAAATTTCCCGTG 59.268 52.381 0.00 0.00 0.00 4.94
335 336 1.621814 TCGTCCTCTCAAATTTCCCGT 59.378 47.619 0.00 0.00 0.00 5.28
336 337 2.380084 TCGTCCTCTCAAATTTCCCG 57.620 50.000 0.00 0.00 0.00 5.14
337 338 3.939066 TCTTCGTCCTCTCAAATTTCCC 58.061 45.455 0.00 0.00 0.00 3.97
338 339 4.393371 CCTTCTTCGTCCTCTCAAATTTCC 59.607 45.833 0.00 0.00 0.00 3.13
339 340 4.393371 CCCTTCTTCGTCCTCTCAAATTTC 59.607 45.833 0.00 0.00 0.00 2.17
340 341 4.327680 CCCTTCTTCGTCCTCTCAAATTT 58.672 43.478 0.00 0.00 0.00 1.82
341 342 3.870299 GCCCTTCTTCGTCCTCTCAAATT 60.870 47.826 0.00 0.00 0.00 1.82
342 343 2.355209 GCCCTTCTTCGTCCTCTCAAAT 60.355 50.000 0.00 0.00 0.00 2.32
343 344 1.002087 GCCCTTCTTCGTCCTCTCAAA 59.998 52.381 0.00 0.00 0.00 2.69
384 385 1.665735 GCGTCCAATGCGTTTGTTCAT 60.666 47.619 0.00 0.00 33.15 2.57
385 386 0.317436 GCGTCCAATGCGTTTGTTCA 60.317 50.000 0.00 0.00 33.15 3.18
386 387 2.420097 GCGTCCAATGCGTTTGTTC 58.580 52.632 0.00 0.00 33.15 3.18
405 406 1.616865 GGGGGCCAAGAAACAGTTAAC 59.383 52.381 4.39 0.00 0.00 2.01
421 422 2.838225 AGATCGTACCAGCGGGGG 60.838 66.667 8.08 0.00 42.91 5.40
427 428 2.566997 CGTTCGCAGATCGTACCAG 58.433 57.895 0.00 0.00 43.77 4.00
443 444 2.587753 CACGTTGGTGTGGCTCGT 60.588 61.111 0.00 0.00 39.38 4.18
463 464 2.428569 GCTCGCGAACGTGTCAGA 60.429 61.111 11.33 0.00 41.18 3.27
464 465 3.470567 GGCTCGCGAACGTGTCAG 61.471 66.667 11.33 0.00 37.35 3.51
481 482 1.712081 CTGCAGCTTTCCGTGATCG 59.288 57.895 0.00 0.00 0.00 3.69
563 565 1.448119 TATCGCCACGAGGAGCTGAG 61.448 60.000 1.86 0.00 39.91 3.35
636 638 2.032681 GGAGCCCATCCCATACGC 59.967 66.667 0.00 0.00 43.01 4.42
711 735 4.077822 CCTGAGAGGCTGAGAAAACAAAT 58.922 43.478 0.00 0.00 0.00 2.32
712 736 3.117888 ACCTGAGAGGCTGAGAAAACAAA 60.118 43.478 0.00 0.00 39.63 2.83
715 739 2.037772 TGACCTGAGAGGCTGAGAAAAC 59.962 50.000 0.00 0.00 39.63 2.43
716 740 2.037772 GTGACCTGAGAGGCTGAGAAAA 59.962 50.000 0.00 0.00 39.63 2.29
720 744 0.531657 CAGTGACCTGAGAGGCTGAG 59.468 60.000 0.00 0.00 41.50 3.35
721 745 1.539560 GCAGTGACCTGAGAGGCTGA 61.540 60.000 0.00 0.00 41.50 4.26
722 746 1.079266 GCAGTGACCTGAGAGGCTG 60.079 63.158 0.00 0.00 41.50 4.85
723 747 2.289532 GGCAGTGACCTGAGAGGCT 61.290 63.158 0.00 0.00 41.50 4.58
724 748 2.267324 GGCAGTGACCTGAGAGGC 59.733 66.667 0.00 0.00 41.50 4.70
725 749 1.294780 GTGGCAGTGACCTGAGAGG 59.705 63.158 0.00 0.00 41.50 3.69
726 750 1.294780 GGTGGCAGTGACCTGAGAG 59.705 63.158 0.00 0.00 41.50 3.20
732 756 3.133365 AAGTGGGGTGGCAGTGACC 62.133 63.158 0.00 0.00 0.00 4.02
742 766 1.146982 AGTATTGTTGGCAAGTGGGGT 59.853 47.619 0.00 0.00 38.10 4.95
747 771 3.412386 GGTCAGAGTATTGTTGGCAAGT 58.588 45.455 0.00 0.00 38.10 3.16
749 773 2.422597 CGGTCAGAGTATTGTTGGCAA 58.577 47.619 0.00 0.00 39.16 4.52
750 774 1.338674 CCGGTCAGAGTATTGTTGGCA 60.339 52.381 0.00 0.00 0.00 4.92
751 775 1.066430 TCCGGTCAGAGTATTGTTGGC 60.066 52.381 0.00 0.00 0.00 4.52
752 776 3.198068 CATCCGGTCAGAGTATTGTTGG 58.802 50.000 0.00 0.00 0.00 3.77
753 777 3.118775 TCCATCCGGTCAGAGTATTGTTG 60.119 47.826 0.00 0.00 0.00 3.33
754 778 3.104512 TCCATCCGGTCAGAGTATTGTT 58.895 45.455 0.00 0.00 0.00 2.83
755 779 2.747177 TCCATCCGGTCAGAGTATTGT 58.253 47.619 0.00 0.00 0.00 2.71
788 813 1.488957 GCGTTGCGAGTTGAGACAG 59.511 57.895 0.00 0.00 0.00 3.51
884 912 1.815613 CTCTCGCTCTCTTCCTGTCAA 59.184 52.381 0.00 0.00 0.00 3.18
976 1008 4.530857 CCGGCCGGACAAGCTAGG 62.531 72.222 41.82 7.45 37.50 3.02
1064 1096 1.340991 GGAAAAGGTATGGCTGGCTGA 60.341 52.381 2.00 0.00 0.00 4.26
1134 1171 5.549742 AGCCAAATGATTCCAAGTCAAAA 57.450 34.783 0.00 0.00 0.00 2.44
1234 1271 8.665175 TCTACTACGTAGAAAAGAATTCAACG 57.335 34.615 28.74 9.47 41.45 4.10
1253 1295 5.359009 CGTCTTGAACCTACCCAATCTACTA 59.641 44.000 0.00 0.00 0.00 1.82
1365 1407 2.999355 GTGAAACTGAAGCTAGCAGAGG 59.001 50.000 18.83 6.85 36.86 3.69
1403 1484 3.251479 TGATCACCCAACAGAATCGAG 57.749 47.619 0.00 0.00 0.00 4.04
1405 1486 2.032550 GCATGATCACCCAACAGAATCG 59.967 50.000 0.00 0.00 0.00 3.34
1406 1487 3.285484 AGCATGATCACCCAACAGAATC 58.715 45.455 0.00 0.00 0.00 2.52
1407 1488 3.377253 AGCATGATCACCCAACAGAAT 57.623 42.857 0.00 0.00 0.00 2.40
1408 1489 2.885135 AGCATGATCACCCAACAGAA 57.115 45.000 0.00 0.00 0.00 3.02
1410 1491 1.747355 GGAAGCATGATCACCCAACAG 59.253 52.381 0.00 0.00 0.00 3.16
1411 1492 1.355381 AGGAAGCATGATCACCCAACA 59.645 47.619 0.00 0.00 0.00 3.33
1412 1493 2.134789 AGGAAGCATGATCACCCAAC 57.865 50.000 0.00 0.00 0.00 3.77
1413 1494 2.041485 TGAAGGAAGCATGATCACCCAA 59.959 45.455 0.00 0.00 0.00 4.12
1414 1495 1.634973 TGAAGGAAGCATGATCACCCA 59.365 47.619 0.00 0.00 0.00 4.51
1415 1496 2.019984 GTGAAGGAAGCATGATCACCC 58.980 52.381 0.00 0.00 35.51 4.61
1430 1511 8.746922 TTCAATGCTTGCTTAATAAAGTGAAG 57.253 30.769 0.00 0.00 34.99 3.02
1493 1578 3.302344 CCCACTGGCAAAACCCGG 61.302 66.667 0.00 0.00 37.83 5.73
1505 1590 5.246429 GCAGCTATACTACTAAATCCCCACT 59.754 44.000 0.00 0.00 0.00 4.00
1563 1648 2.699846 TCAAGGGAAATGCAAGCAAAGT 59.300 40.909 0.00 0.00 0.00 2.66
1592 1677 5.290493 ACTTCTTGTTCACATACCTGACA 57.710 39.130 0.00 0.00 0.00 3.58
1762 1847 4.707105 TGATCGATGATGTTAAGCACCAT 58.293 39.130 0.54 0.00 0.00 3.55
1791 1876 1.003355 TACAGCAAGACAGGGCAGC 60.003 57.895 0.00 0.00 0.00 5.25
1801 1886 3.809832 CCGTATCCCAAATCTACAGCAAG 59.190 47.826 0.00 0.00 0.00 4.01
1921 2006 2.920384 TGCCAGGTGCCGAGTGTA 60.920 61.111 0.00 0.00 40.16 2.90
1980 2065 6.152661 TCACCAAGTGTTCTTTTGACAAAGAT 59.847 34.615 0.10 0.00 39.17 2.40
1982 2067 5.708948 TCACCAAGTGTTCTTTTGACAAAG 58.291 37.500 0.10 0.00 36.83 2.77
1983 2068 5.713792 TCACCAAGTGTTCTTTTGACAAA 57.286 34.783 0.00 0.00 34.79 2.83
1985 2070 4.439974 GCATCACCAAGTGTTCTTTTGACA 60.440 41.667 0.00 0.00 34.79 3.58
1986 2071 4.044426 GCATCACCAAGTGTTCTTTTGAC 58.956 43.478 0.00 0.00 34.79 3.18
1987 2072 3.243035 CGCATCACCAAGTGTTCTTTTGA 60.243 43.478 0.00 0.00 34.79 2.69
1988 2073 3.044986 CGCATCACCAAGTGTTCTTTTG 58.955 45.455 0.00 0.00 34.79 2.44
1990 2075 2.297701 ACGCATCACCAAGTGTTCTTT 58.702 42.857 0.00 0.00 34.79 2.52
1991 2076 1.967319 ACGCATCACCAAGTGTTCTT 58.033 45.000 0.00 0.00 34.79 2.52
1997 2082 2.113860 AAGCATACGCATCACCAAGT 57.886 45.000 0.00 0.00 42.27 3.16
1998 2083 2.935849 TGTAAGCATACGCATCACCAAG 59.064 45.455 0.00 0.00 42.27 3.61
1999 2084 2.979240 TGTAAGCATACGCATCACCAA 58.021 42.857 0.00 0.00 42.27 3.67
2000 2085 2.682155 TGTAAGCATACGCATCACCA 57.318 45.000 0.00 0.00 42.27 4.17
2001 2086 4.750098 ACTATTGTAAGCATACGCATCACC 59.250 41.667 0.00 0.00 42.27 4.02
2004 2089 5.388890 GCAGACTATTGTAAGCATACGCATC 60.389 44.000 0.00 0.00 42.27 3.91
2014 2139 6.743110 TGATAGCAGAGCAGACTATTGTAAG 58.257 40.000 0.00 0.00 0.00 2.34
2027 2152 5.353678 ACAACTGAGAATTTGATAGCAGAGC 59.646 40.000 0.00 0.00 0.00 4.09
2028 2153 6.981762 ACAACTGAGAATTTGATAGCAGAG 57.018 37.500 0.00 0.00 0.00 3.35
2069 2194 5.238650 ACGATTCAAAGGACTAAACAACCAG 59.761 40.000 0.00 0.00 0.00 4.00
2088 2213 9.542462 AACATTGTACTATTGCAGTATACGATT 57.458 29.630 0.00 0.00 41.77 3.34
2186 2521 1.177401 GGAATTGCTTGGGGTCTGAC 58.823 55.000 0.00 0.00 0.00 3.51
2270 2605 7.441157 TGAAGAAACTGACATCGTAATTCAAGT 59.559 33.333 0.00 0.00 0.00 3.16
2315 2659 6.536582 GCAGAGCATGACAGTAAAGAAATAGA 59.463 38.462 0.00 0.00 0.00 1.98
2317 2661 6.092670 GTGCAGAGCATGACAGTAAAGAAATA 59.907 38.462 0.00 0.00 41.91 1.40
2322 2666 3.069289 TGTGCAGAGCATGACAGTAAAG 58.931 45.455 0.00 0.00 41.91 1.85
2324 2668 2.613725 CCTGTGCAGAGCATGACAGTAA 60.614 50.000 5.08 0.00 41.91 2.24
2331 2675 0.322277 AGGAACCTGTGCAGAGCATG 60.322 55.000 5.08 0.00 41.91 4.06
2332 2676 0.322277 CAGGAACCTGTGCAGAGCAT 60.322 55.000 5.08 0.00 41.91 3.79
2443 2787 1.302752 AAGCTTGGCGATGCACAGA 60.303 52.632 9.22 0.00 0.00 3.41
2461 2805 3.332385 TGCTCATGCTCCAGGGCA 61.332 61.111 0.00 0.00 46.63 5.36
2465 2809 0.179092 TGATCGTGCTCATGCTCCAG 60.179 55.000 0.00 0.00 40.48 3.86
2538 2888 7.252612 TCCAGATAACCTGATAAAACTCACA 57.747 36.000 0.00 0.00 45.78 3.58
2547 2897 3.637821 AGGCCTCCAGATAACCTGATA 57.362 47.619 0.00 0.00 45.78 2.15
2548 2898 2.503869 AGGCCTCCAGATAACCTGAT 57.496 50.000 0.00 0.00 45.78 2.90
2587 2944 8.312564 GGTTAAGACACTAGTGGACTAAGAAAT 58.687 37.037 26.12 11.14 34.19 2.17
2590 2969 5.413833 CGGTTAAGACACTAGTGGACTAAGA 59.586 44.000 26.12 11.13 34.19 2.10
2597 2976 3.655276 ACACGGTTAAGACACTAGTGG 57.345 47.619 26.12 8.69 32.95 4.00
2670 3049 1.801913 CGCTCGTCTGTTCTTCCGG 60.802 63.158 0.00 0.00 0.00 5.14
2672 3051 0.173708 ATCCGCTCGTCTGTTCTTCC 59.826 55.000 0.00 0.00 0.00 3.46
2723 3125 8.184192 GTGCAATAAATGTAGCAGAATTGTAGT 58.816 33.333 0.00 0.00 37.72 2.73
2917 3319 8.375506 AGTATTCTCTGTTACAATCAGACCAAA 58.624 33.333 0.00 0.00 37.07 3.28
2961 3364 7.619302 TGAGAAGGGGAATGCAGTTTATTTATT 59.381 33.333 0.00 0.00 0.00 1.40
3078 3514 7.715249 TGTTGGTTTCCTATATGTCTATTCTGC 59.285 37.037 0.00 0.00 0.00 4.26
3174 3610 6.364701 TGCTATTTAACAAGATGGTATGCCT 58.635 36.000 0.16 0.00 35.27 4.75
3197 3633 0.247814 GTTGATGCGTCGCTGGAATG 60.248 55.000 19.50 0.00 0.00 2.67
3210 3646 1.012086 CTGGACTGCCATCGTTGATG 58.988 55.000 0.00 0.00 44.91 3.07
3216 3652 1.517257 GTCGACTGGACTGCCATCG 60.517 63.158 8.70 0.00 44.91 3.84
3229 3665 2.528041 AACTGAAGGTGAAGGTCGAC 57.472 50.000 7.13 7.13 0.00 4.20
3279 3715 4.338012 TGTCACTCTCGAATACCCTACAA 58.662 43.478 0.00 0.00 0.00 2.41
3353 3789 0.922626 GAAGGGGAAGAGGAAGGCAT 59.077 55.000 0.00 0.00 0.00 4.40
3400 3840 2.411904 GATGATGACGAGATTGAGCCC 58.588 52.381 0.00 0.00 0.00 5.19
3431 3871 5.541845 TGAGGATATGATTAGCCTTGAACG 58.458 41.667 0.00 0.00 44.30 3.95
3466 3906 0.958091 TGTTTTCTGATGCGGGTTGG 59.042 50.000 0.00 0.00 0.00 3.77
3578 4019 2.418669 GGGGATTGGTGAGGGAAGATA 58.581 52.381 0.00 0.00 0.00 1.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.